IVF0006205 (gene) Melon (IVF77) v1

Overview
NameIVF0006205
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Locationchr05: 14198448 .. 14203113 (-)
RNA-Seq ExpressionIVF0006205
SyntenyIVF0006205
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAAACGATCCTTGCCACTCGTCAGGTACGCTCTCATGAAATTATATGTATAACTCTATATGCATTACCTTACCTAAGTTAAACTGCGAAGTTAATTACCACTTATGACTAAAGGGATCATTGGTGGTTGTTAGGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGCGCCAGTTACTCATGCGGATCTAGCTGCCATGGAGCAGAGGTTTAGGGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCTCCTACTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTATCGTCTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTTCGAGCCTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGGCCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGTTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTGGTGACAGGTACGCTTCCAGTATTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGATCGTCACATTCTTTTATCTCTTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAGTGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGTTAGTCCTGGATATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGCAGTCACTATACAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAAGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAAGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGTTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAAGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAAGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAACTCCTTTGGTTAAGTCTTATGGCGGAATCACCAGGTGGAAGAGGCTACATGGGAGCGAGAAGATGACATGA

mRNA sequence

ATGGCTAAAACGATCCTTGCCACTCGTCAGGGATCATTGGTGGTTGTTAGGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGCGCCAGTTACTCATGCGGATCTAGCTGCCATGGAGCAGAGGTTTAGGGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCTCCTACTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTATCGTCTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTTCGAGCCTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGGCCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGTTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTGGTGACAGGTACGCTTCCAGTATTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGATCGTCACATTCTTTTATCTCTTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAGTGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGTTAGTCCTGGATATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAAGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAAGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGTTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAAGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAAGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAACTCCTTTGGTTAAGTCTTATGGCGGAATCACCAGGTGGAAGAGGCTACATGGGAGCGAGAAGATGACATGA

Coding sequence (CDS)

ATGGCTAAAACGATCCTTGCCACTCGTCAGGGATCATTGGTGGTTGTTAGGGAAATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGTGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCACTGACCCGGCTGCGCCAGTTACTCATGCGGATCTAGCTGCCATGGAGCAGAGGTTTAGGGATTTGATTATGCAGATGCGGGAGCAGCAGCAGCCTGCCCCGCCAGCTCCAGCTCCTACTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACATTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGCTGTGGTTATCGTCTTTGGAGACCATATTCCGATACATGAAGTGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTCAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTTCGAGCCTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGGCCGCTGGTAGAGGTTCAACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAACTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAAGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGAAAGCACCATCTGGGCCGTTGTTTATTCGGGACCAGGACTTGCTTTAAGTGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAGGGCAGGCACGGTGGTGACAGGTACGCTTCCAGTATTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGATCGTCACATTCTTTTATCTCTTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAGTGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAGATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGTTAGTCCTGGATATGCTCGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCCCGTAAGGAGGTAGCGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAGTTACAAGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAAGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAAGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTTCAAATTCTGGAAAGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGTTGGGGTGAGGTGGGTGAGCAGAGATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGATCTTGAGTTTGAGGTAAGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAAAGGAAGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCATGATGTGTTTCATGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGAGCTATACTGAACAACCCGTTGAGGTGCTGGCTAGAGAGGTGAAAATGTTGAGGAATAGAGAAACTCCTTTGGTTAAGTCTTATGGCGGAATCACCAGGTGGAAGAGGCTACATGGGAGCGAGAAGATGACATGA

Protein sequence

MAKTILATRQGSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVKSYGGITRWKRLHGSEKMT
Homology
[Close]
BLAST of IVF0006205 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.3e-144
Identity = 296/878 (33.71%), Postives = 476/878 (54.21%), Query Frame = 0 

Query: 584  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 643
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 644  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 703
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 704  QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 763
             +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 764  LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 823
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 824  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 883
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 884  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 943
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 944  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 1003
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 1004 KDYDCEILYHPGKANVVADALSR------------------KLAQLTVQPTLRQRIIDAQ 1063
            +D++ EI Y PG AN +ADALSR                   + Q+++    + +++   
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEY 870

Query: 1064 SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSM 1123
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 871  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 930

Query: 1124 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1183
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 931  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 990

Query: 1184 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1243
            +SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 991  LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1050

Query: 1244 SIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1303
             I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +LR      P 
Sbjct: 1051 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1110

Query: 1304 SWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNE 1363
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +
Sbjct: 1111 TWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQ 1170

Query: 1364 AIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVRDKVFLKVAPMRGVLRFERKGKLSPRFV 1423
              Q ++  ++T   + K Y D++ +++ EF+  D V +K     G L   +  KL+P F 
Sbjct: 1171 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFA 1230

Query: 1424 GPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1430
            GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006205 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.3e-144
Identity = 296/878 (33.71%), Postives = 476/878 (54.21%), Query Frame = 0 

Query: 584  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 643
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 644  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 703
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 704  QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 763
             +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 764  LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 823
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 824  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 883
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 884  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 943
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 944  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 1003
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 1004 KDYDCEILYHPGKANVVADALSR------------------KLAQLTVQPTLRQRIIDAQ 1063
            +D++ EI Y PG AN +ADALSR                   + Q+++    + +++   
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEY 870

Query: 1064 SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSM 1123
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 871  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 930

Query: 1124 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1183
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 931  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 990

Query: 1184 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1243
            +SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 991  LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1050

Query: 1244 SIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1303
             I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +LR      P 
Sbjct: 1051 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1110

Query: 1304 SWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNE 1363
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +
Sbjct: 1111 TWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQ 1170

Query: 1364 AIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVRDKVFLKVAPMRGVLRFERKGKLSPRFV 1423
              Q ++  ++T   + K Y D++ +++ EF+  D V +K     G L   +  KL+P F 
Sbjct: 1171 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFA 1230

Query: 1424 GPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1430
            GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006205 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.3e-144
Identity = 296/878 (33.71%), Postives = 476/878 (54.21%), Query Frame = 0 

Query: 584  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 643
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 644  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 703
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 704  QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 763
             +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 764  LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 823
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 824  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 883
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 884  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 943
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 944  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 1003
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 1004 KDYDCEILYHPGKANVVADALSR------------------KLAQLTVQPTLRQRIIDAQ 1063
            +D++ EI Y PG AN +ADALSR                   + Q+++    + +++   
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEY 870

Query: 1064 SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSM 1123
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 871  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 930

Query: 1124 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1183
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 931  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 990

Query: 1184 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1243
            +SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 991  LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1050

Query: 1244 SIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1303
             I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +LR      P 
Sbjct: 1051 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1110

Query: 1304 SWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNE 1363
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +
Sbjct: 1111 TWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQ 1170

Query: 1364 AIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVRDKVFLKVAPMRGVLRFERKGKLSPRFV 1423
              Q ++  ++T   + K Y D++ +++ EF+  D V +K     G L   +  KL+P F 
Sbjct: 1171 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFA 1230

Query: 1424 GPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1430
            GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006205 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.3e-144
Identity = 296/878 (33.71%), Postives = 476/878 (54.21%), Query Frame = 0 

Query: 584  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 643
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 644  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 703
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 704  QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 763
             +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 764  LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 823
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 824  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 883
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 884  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 943
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 944  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 1003
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 1004 KDYDCEILYHPGKANVVADALSR------------------KLAQLTVQPTLRQRIIDAQ 1063
            +D++ EI Y PG AN +ADALSR                   + Q+++    + +++   
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEY 870

Query: 1064 SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSM 1123
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 871  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 930

Query: 1124 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1183
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 931  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 990

Query: 1184 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1243
            +SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 991  LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1050

Query: 1244 SIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1303
             I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +LR      P 
Sbjct: 1051 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1110

Query: 1304 SWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNE 1363
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +
Sbjct: 1111 TWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQ 1170

Query: 1364 AIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVRDKVFLKVAPMRGVLRFERKGKLSPRFV 1423
              Q ++  ++T   + K Y D++ +++ EF+  D V +K     G L   +  KL+P F 
Sbjct: 1171 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFA 1230

Query: 1424 GPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1430
            GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006205 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 6.3e-144
Identity = 296/878 (33.71%), Postives = 476/878 (54.21%), Query Frame = 0 

Query: 584  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 643
            E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391  EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 644  GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 703
              PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451  ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 704  QLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 763
             +R++ GD  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511  LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 764  LIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 823
            LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571  LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 824  AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQN 883
             V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + +N
Sbjct: 631  KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 884  LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 943
            +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691  IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 944  YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 1003
            Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751  YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 1004 KDYDCEILYHPGKANVVADALSR------------------KLAQLTVQPTLRQRIIDAQ 1063
            +D++ EI Y PG AN +ADALSR                   + Q+++    + +++   
Sbjct: 811  QDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEY 870

Query: 1064 SNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSM 1123
            +ND  L+    L    + VE +I    GLL   +  + +P+D+ +   ++ + H     +
Sbjct: 871  TNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLI 930

Query: 1124 HPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWEN 1183
            HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE+
Sbjct: 931  HPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWES 990

Query: 1184 VSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPV 1243
            +SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P 
Sbjct: 991  LSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPK 1050

Query: 1244 SIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPG 1303
             I++D D  FT + WK         + FS  + PQTDGQTER NQ +E +LR      P 
Sbjct: 1051 EIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPN 1110

Query: 1304 SWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNE 1363
            +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +
Sbjct: 1111 TWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPL---ELPSFSDKTDENSQETIQ 1170

Query: 1364 AIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVRDKVFLKVAPMRGVLRFERKGKLSPRFV 1423
              Q ++  ++T   + K Y D++ +++ EF+  D V +K     G L   +  KL+P F 
Sbjct: 1171 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSFA 1230

Query: 1424 GPFEILERIGPVAYRLALPPSLSTV-HDVFHVSMLRKY 1430
            GPF +L++ GP  Y L LP S+  +    FHVS L KY
Sbjct: 1231 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]
BLAST of IVF0006205 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 2752.2 bits (7133), Expect = 0.0e+00
Identity = 1391/1499 (92.80%), Postives = 1406/1499 (93.80%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 79   QQQPAPPAPAPTPAP----------APVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQ+PA P PAP PAP          APVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTVVTGTLPVLGHYALVLFD   
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFD--- 420

Query: 439  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLD 498
                                    SVSTPSGECMLSKEKVK CQIEIAGHVIEVTLLVLD
Sbjct: 421  ------------------------SVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAA+HASIDCSRKEV FNPPS ASFKFKG GSRSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 678
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 679  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 738
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------- 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK          
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1039 -----------------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1098
                                   LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1099 EFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1158
            EFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1140

Query: 1159 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWV 1218
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWV
Sbjct: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT KFWK LQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATI 1320

Query: 1339 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1458
            RRKDLEFEV DKVFLKVAPMRGVLRFER+GKLSPRF+GPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLS 1440

Query: 1459 TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1475
            TVHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSYTEQPVEVLAREVK LRN+E PLVK
Sbjct: 1441 TVHDVFHVSMLRKYVPDPSHVVDYKPLKIDENLSYTEQPVEVLAREVKTLRNKEIPLVK 1472

[Close]
BLAST of IVF0006205 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)

HSP 1 Score: 2741.1 bits (7104), Expect = 0.0e+00
Identity = 1382/1466 (94.27%), Postives = 1396/1466 (95.23%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRF+DLIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFKDLIMQMRE 60

Query: 79   QQQPAPPA----------PAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQ+PA PA          PAP PAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPAPAPAPAPAPVPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQLWLSSLETIFRYMKCPED KVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQLWLSSLETIFRYMKCPEDPKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQP 318
            KFVRGL LDIQGLVRAFRP THADALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLWLDIQGLVRAFRPPTHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGNA NQGAGAPHQGRVFATNKTEAE+AGTVVT                  
Sbjct: 361  TADRCPLRLTGNAPNQGAGAPHQGRVFATNKTEAEKAGTVVT------------------ 420

Query: 439  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLD 498
                           EVEPLHHVLSVSTPSGECMLSKE+VKACQIEIAGHVIEVTLLVLD
Sbjct: 421  ---------------EVEPLHHVLSVSTPSGECMLSKERVKACQIEIAGHVIEVTLLVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEV FNPPSMASFKFKG GS+SLPQVISAI+ASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIKASKLL 540

Query: 559  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYSDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 619  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 678
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID RELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNK 660

Query: 679  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 738
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSD 900

Query: 919  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            A KKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  AFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTL 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTL
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTL 1020

Query: 1039 RQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAH 1098
            RQRIIDAQSNDPYLVEKRGLAE  QAVEFS+SSDGGLLFERRLCVPSD AVKTELLSEAH
Sbjct: 1021 RQRIIDAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAH 1080

Query: 1099 SSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP 1158
            SSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP
Sbjct: 1081 SSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP 1140

Query: 1159 EWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR 1218
            EWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEIVR
Sbjct: 1141 EWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVR 1200

Query: 1219 LHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC 1278
            LHGVPVSIVSDRDAR T KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC
Sbjct: 1201 LHGVPVSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC 1260

Query: 1279 ALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1338
            ALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELV
Sbjct: 1261 ALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELV 1320

Query: 1339 QSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLS 1398
            QSTNEAIQKI+SRM TAQSRQKSYADVRRKDLEFEV DKVFLKVAPMRGVLRFER+GKLS
Sbjct: 1321 QSTNEAIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLS 1380

Query: 1399 PRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL 1458
              FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL
Sbjct: 1381 SHFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL 1433

Query: 1459 SYTEQPVEVLAREVKMLRNRETPLVK 1475
            SYTEQPVEVLAREVK LR++E PLVK
Sbjct: 1441 SYTEQPVEVLAREVKTLRSKEIPLVK 1433

[Close]
BLAST of IVF0006205 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)

HSP 1 Score: 2734.9 bits (7088), Expect = 0.0e+00
Identity = 1382/1490 (92.75%), Postives = 1400/1490 (93.96%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPE +P +    PA                        
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE-KPASPTPAPA------------------------ 60

Query: 79   QQQPAP-PAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQL 138
               PAP PAP P PAPA VPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+
Sbjct: 61   ---PAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQM 120

Query: 139  WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA 198
            WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA
Sbjct: 121  WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA 180

Query: 199  KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD 258
            KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD
Sbjct: 181  KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD 240

Query: 259  IQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVPVPQRNFR 318
            IQGLVRAFRPATHADALRLAVDLSLQE ANSSK AGRGSTSGQKRKAEQQPVPVPQRNFR
Sbjct: 241  IQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFR 300

Query: 319  SGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL 378
            SGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL
Sbjct: 301  SGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL 360

Query: 379  TGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 438
            TG AQNQGAGAPHQGRVFATN+TEAE+AGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF
Sbjct: 361  TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 420

Query: 439  VLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILG 498
            V HARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIEIAGHVIEVTL+VLDMLDFDVILG
Sbjct: 421  VSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILG 480

Query: 499  MDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILA 558
            MDWLAANHASIDCSRK+V FNPPSMASFKFKG GS+SLPQVISAIRASKLLSQGTWGILA
Sbjct: 481  MDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA 540

Query: 559  SVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 618
            SVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP
Sbjct: 541  SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 600

Query: 619  AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 678
            AELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL
Sbjct: 601  AELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 660

Query: 679  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP 738
            PRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAP
Sbjct: 661  PRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAP 720

Query: 739  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCE 798
            AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCE
Sbjct: 721  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCE 780

Query: 799  FWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 858
            FWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI
Sbjct: 781  FWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 840

Query: 859  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 918
            ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV
Sbjct: 841  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 900

Query: 919  LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF 978
            LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF
Sbjct: 901  LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF 960

Query: 979  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK------------------- 1038
            FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                   
Sbjct: 961  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE 1020

Query: 1039 --------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGG 1098
                          LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGG
Sbjct: 1021 RAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGG 1080

Query: 1099 LLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK 1158
            L FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK
Sbjct: 1081 LSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK 1140

Query: 1159 CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSA 1218
            CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSA
Sbjct: 1141 CLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA 1200

Query: 1219 HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFST 1278
            HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQTAMGTRLDFST
Sbjct: 1201 HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST 1260

Query: 1279 AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1338
            AFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
Sbjct: 1261 AFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1320

Query: 1339 GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEV 1398
            GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+
Sbjct: 1321 GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEI 1380

Query: 1399 RDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 1458
            RDKVFLKVAPM+GVLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS
Sbjct: 1381 RDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 1440

Query: 1459 MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1475
            MLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN+E PLVK
Sbjct: 1441 MLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVK 1462

[Close]
BLAST of IVF0006205 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 2718.3 bits (7045), Expect = 0.0e+00
Identity = 1377/1499 (91.86%), Postives = 1397/1499 (93.20%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 79   QQQ---------PAP-PAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQ+         PAP PAP P PAPAPVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFRSGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAE+AGT+VTGTLPVLGHYALVLF SGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTIVTGTLPVLGHYALVLFYSGS 420

Query: 439  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLD 498
            SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTL+VLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEV FNPPSMASFKFKG GS+SLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 619  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 678
            SRAPYRMAPAELK+LKVQLQELLDKG                              ELNK
Sbjct: 601  SRAPYRMAPAELKDLKVQLQELLDKG------------------------------ELNK 660

Query: 679  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 738
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTTFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRD K
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDYK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLVGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------- 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK          
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSVALITR 1020

Query: 1039 -----------------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1098
                                   LA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSMGAVTMQLARLAVQPTLRQRIIDAQGNDPYLVEKRGLVEAGQTA 1080

Query: 1099 EFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1158
            EFS+SSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMHPGSTK+YQDLKRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSAVKIELLSEAHSSPFSMHPGSTKIYQDLKRVYWWRNMK 1140

Query: 1159 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWV 1218
            REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1320

Query: 1339 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1458
            RRKDLEFEV DKVFLKVAPMRGV+RFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1440

Query: 1459 TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1475
            TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTE+PV+VLAREVK LRN+E PLVK
Sbjct: 1441 TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTERPVKVLAREVKTLRNKEIPLVK 1469

[Close]
BLAST of IVF0006205 vs. ExPASy TrEMBL
Match: A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)

HSP 1 Score: 2712.2 bits (7029), Expect = 0.0e+00
Identity = 1375/1493 (92.10%), Postives = 1387/1493 (92.90%), Query Frame = 0 

Query: 15   VVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIM 74
            V  EMPPRRGAR   RGGRGRGAGRVQPEVQPVA+ATDPAAP                  
Sbjct: 153  VFLEMPPRRGAR---RGGRGRGAGRVQPEVQPVAKATDPAAP------------------ 212

Query: 75   QMREQQQPAPPAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTR 134
                                       VVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTR
Sbjct: 213  ---------------------------VVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTR 272

Query: 135  AQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKES 194
            AQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQI WQQFKES
Sbjct: 273  AQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQIMWQQFKES 332

Query: 195  FYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGL 254
            FY+KFFSASLRDA+RQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARADKFVRGL
Sbjct: 333  FYSKFFSASLRDAERQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARADKFVRGL 392

Query: 255  RLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVPVPQR 314
            RLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQPVPVPQR
Sbjct: 393  RLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQR 452

Query: 315  NFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP 374
            NFRS GEFRRFQQKPFE GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP
Sbjct: 453  NFRSCGEFRRFQQKPFEVGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCP 512

Query: 375  LRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFIS 434
            LRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFIS
Sbjct: 513  LRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFIS 572

Query: 435  SAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDV 494
            SAFVLHARLEVEPLHHVLSVSTPS ECMLSKEKVKACQIEIA HVIEVTLLVLDMLDFDV
Sbjct: 573  SAFVLHARLEVEPLHHVLSVSTPSRECMLSKEKVKACQIEIADHVIEVTLLVLDMLDFDV 632

Query: 495  ILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWG 554
            ILGMDWLAANHASIDCSRKEV FNPPSMASFKFKG GSRSLPQVISAIRASKLLSQGTWG
Sbjct: 633  ILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWG 692

Query: 555  ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYR 614
            ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYR
Sbjct: 693  ILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYR 752

Query: 615  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 674
            MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR
Sbjct: 753  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNR 812

Query: 675  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 734
            YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT
Sbjct: 813  YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLT 872

Query: 735  NAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFS 794
            NAPAVFMDLMNRVF+EFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFS
Sbjct: 873  NAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFS 932

Query: 795  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 854
            KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF
Sbjct: 933  KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENF 992

Query: 855  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 914
            SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Sbjct: 993  SRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 1052

Query: 915  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSL 974
            G VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQIFTDHKSL
Sbjct: 1053 GFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIFTDHKSL 1112

Query: 975  KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------------- 1034
            KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                
Sbjct: 1113 KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRHAPLHR 1172

Query: 1035 -----------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS 1094
                             LAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FSISS
Sbjct: 1173 DLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISS 1232

Query: 1095 DGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF 1154
            DGGL+FERRLCVPSDSA+K ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEF
Sbjct: 1233 DGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMKREVAEF 1292

Query: 1155 VSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLT 1214
            VS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLT
Sbjct: 1293 VSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLT 1352

Query: 1215 KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLD 1274
            KSAHFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDARFT +FWKGLQTAMGTRLD
Sbjct: 1353 KSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTAMGTRLD 1412

Query: 1275 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1334
            FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE
Sbjct: 1413 FSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFE 1472

Query: 1335 ALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLE 1394
            ALY KCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLE
Sbjct: 1473 ALYDKCCRSLVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLE 1532

Query: 1395 FEVRDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVF 1454
            FEV DKVFLKVAPMRGVLRFER+GKLSPRFVG FEILERIGPVAYR+ALPPSLSTVHDVF
Sbjct: 1533 FEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERIGPVAYRVALPPSLSTVHDVF 1592

Query: 1455 HVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1475
            HVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRE PLVK
Sbjct: 1593 HVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVK 1597

[Close]
BLAST of IVF0006205 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2744 bits (7113), Expect = 0.0
Identity = 1391/1499 (92.80%), Postives = 1406/1499 (93.80%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRDLIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 79   QQQPAPPAPAPTPAPAP----------VPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQ+PA P PAP PAPAP          VPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPTPAPAPAPAPAPAPAPALAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRG TSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARWKPLCTICGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAE+AGTVVTGTLPVLGHYALVLFDS  
Sbjct: 361  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDS-- 420

Query: 439  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLD 498
                                     VSTPSGECMLSKEKVK CQIEIAGHVIEVTLLVLD
Sbjct: 421  -------------------------VSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAA+HASIDCSRKEV FNPPS ASFKFKG GSRSLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 619  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 678
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 660

Query: 679  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 738
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------- 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK          
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1020

Query: 1039 -----------------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1098
                                   LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1021 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1080

Query: 1099 EFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1158
            EFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMK 1140

Query: 1159 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWV 1218
            REVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWV
Sbjct: 1141 REVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT KFWK LQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFPGSWDSHLHLMEFVYNNSYQATI 1320

Query: 1339 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1458
            RRKDLEFEV DKVFLKVAPMRGVLRFER+GKLSPRF+GPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFIGPFEILERIGPVAYRLALPPSLS 1440

Query: 1459 TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1474
            TVHDVFHVSMLRKYVPDPSHVVDY+PL+IDENLSYTEQPVEVLAREVK LRN+E PLVK
Sbjct: 1441 TVHDVFHVSMLRKYVPDPSHVVDYKPLKIDENLSYTEQPVEVLAREVKTLRNKEIPLVK 1472

[Close]
BLAST of IVF0006205 vs. NCBI nr
Match: KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 2732 bits (7082), Expect = 0.0
Identity = 1382/1466 (94.27%), Postives = 1396/1466 (95.23%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRF+DLIMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFKDLIMQMRE 60

Query: 79   QQQPAPPAPAPTPAPAPVP----------VAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQ+PA PAPAP PAPAPVP          VAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPASPAPAPAPAPAPVPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQLWLSSLETIFRYMKCPED KVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQLWLSSLETIFRYMKCPEDPKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQP 318
            KFVRGL LDIQGLVRAFRP THADALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLWLDIQGLVRAFRPPTHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTGNA NQGAGAPHQGRVFATNKTEAE+AGTVVT                  
Sbjct: 361  TADRCPLRLTGNAPNQGAGAPHQGRVFATNKTEAEKAGTVVT------------------ 420

Query: 439  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLD 498
                           EVEPLHHVLSVSTPSGECMLSKE+VKACQIEIAGHVIEVTLLVLD
Sbjct: 421  ---------------EVEPLHHVLSVSTPSGECMLSKERVKACQIEIAGHVIEVTLLVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEV FNPPSMASFKFKG GS+SLPQVISAI+ASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIKASKLL 540

Query: 559  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTRE DVSLSSEPVVRDY DVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYSDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 619  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 678
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCID RELNK
Sbjct: 601  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDNRELNK 660

Query: 679  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 738
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNK
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVP+GSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPNGSGSFVIYSD 900

Query: 919  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            A KKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  AFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTL 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTL
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTL 1020

Query: 1039 RQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAH 1098
            RQRIIDAQSNDPYLVEKRGLAE  QAVEFS+SSDGGLLFERRLCVPSD AVKTELLSEAH
Sbjct: 1021 RQRIIDAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAH 1080

Query: 1099 SSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP 1158
            SSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP
Sbjct: 1081 SSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIP 1140

Query: 1159 EWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVR 1218
            EWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHF+PGKSTYTASKWAQLYMSEIVR
Sbjct: 1141 EWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVR 1200

Query: 1219 LHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC 1278
            LHGVPVSIVSDRDAR T KFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC
Sbjct: 1201 LHGVPVSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRAC 1260

Query: 1279 ALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELV 1338
            ALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQRLMGPELV
Sbjct: 1261 ALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELV 1320

Query: 1339 QSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLS 1398
            QSTNEAIQKI+SRM TAQSRQKSYADVRRKDLEFEV DKVFLKVAPMRGVLRFER+GKLS
Sbjct: 1321 QSTNEAIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLS 1380

Query: 1399 PRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL 1458
              FVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL
Sbjct: 1381 SHFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENL 1433

Query: 1459 SYTEQPVEVLAREVKMLRNRETPLVK 1474
            SYTEQPVEVLAREVK LR++E PLVK
Sbjct: 1441 SYTEQPVEVLAREVKTLRSKEIPLVK 1433

[Close]
BLAST of IVF0006205 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2726 bits (7067), Expect = 0.0
Identity = 1382/1490 (92.75%), Postives = 1400/1490 (93.96%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPE +P +    PA                        
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPE-KPASPTPAPA------------------------ 60

Query: 79   QQQPAP-PAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQL 138
               PAP PAP P PAPA VPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQ+
Sbjct: 61   ---PAPAPAPVPAPAPALVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQM 120

Query: 139  WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA 198
            WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA
Sbjct: 121  WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA 180

Query: 199  KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD 258
            KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD
Sbjct: 181  KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD 240

Query: 259  IQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVPVPQRNFR 318
            IQGLVRAFRPATHADALRLAVDLSLQE ANSSK AGRGSTSGQKRKAEQQPVPVPQRNFR
Sbjct: 241  IQGLVRAFRPATHADALRLAVDLSLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFR 300

Query: 319  SGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL 378
            SGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL
Sbjct: 301  SGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL 360

Query: 379  TGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 438
            TG AQNQGAGAPHQGRVFATN+TEAE+AGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF
Sbjct: 361  TGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 420

Query: 439  VLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILG 498
            V HARLEVEPLHHVLSVSTPSGECMLS+EKVKACQIEIAGHVIEVTL+VLDMLDFDVILG
Sbjct: 421  VSHARLEVEPLHHVLSVSTPSGECMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILG 480

Query: 499  MDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILA 558
            MDWLAANHASIDCSRK+V FNPPSMASFKFKG GS+SLPQVISAIRASKLLSQGTWGILA
Sbjct: 481  MDWLAANHASIDCSRKDVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILA 540

Query: 559  SVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 618
            SVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP
Sbjct: 541  SVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 600

Query: 619  AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 678
            AELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL
Sbjct: 601  AELKELKVQLQELLDKGFIRPNVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 660

Query: 679  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP 738
            PRIDDLFDQLQGATVFSKIDLRSGY+QLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAP
Sbjct: 661  PRIDDLFDQLQGATVFSKIDLRSGYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAP 720

Query: 739  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCE 798
            AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCE
Sbjct: 721  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCE 780

Query: 799  FWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 858
            FWLKQVSFLGHVVSKA VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI
Sbjct: 781  FWLKQVSFLGHVVSKARVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 840

Query: 859  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 918
            ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV
Sbjct: 841  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 900

Query: 919  LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF 978
            LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF
Sbjct: 901  LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF 960

Query: 979  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK------------------- 1038
            FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                   
Sbjct: 961  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE 1020

Query: 1039 --------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGG 1098
                          LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFS+SSDGG
Sbjct: 1021 RAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGG 1080

Query: 1099 LLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK 1158
            L FE RLCVPSDSAVKTELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK
Sbjct: 1081 LSFEGRLCVPSDSAVKTELLFEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK 1140

Query: 1159 CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSA 1218
            CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSA
Sbjct: 1141 CLVCQQVKEPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA 1200

Query: 1219 HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFST 1278
            HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQTAMGTRLDFST
Sbjct: 1201 HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST 1260

Query: 1279 AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1338
            AFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
Sbjct: 1261 AFHPQADGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1320

Query: 1339 GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEV 1398
            GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+
Sbjct: 1321 GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEI 1380

Query: 1399 RDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 1458
            RDKVFLKVAPM+GVLRFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS
Sbjct: 1381 RDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 1440

Query: 1459 MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1474
            MLRKYVPDPSHVVDYEPLEIDENLSY EQPVEVLAREVK LRN+E PLVK
Sbjct: 1441 MLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLAREVKTLRNKEIPLVK 1462

[Close]
BLAST of IVF0006205 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2712 bits (7030), Expect = 0.0
Identity = 1377/1499 (91.86%), Postives = 1397/1499 (93.20%), Query Frame = 0 

Query: 19   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMRE 78
            MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQA DPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1    MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 79   QQQP---------AP-PAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 138
            QQ+P         AP PAP P PAPAPVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61   QQKPVSPNPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 139  LEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 198
            LEDPTRAQ+WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121  LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 199  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 258
            QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD
Sbjct: 181  QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 259  KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQP 318
            KFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQP
Sbjct: 241  KFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 319  VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 378
            VPVPQRNFRSGGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301  VPVPQRNFRSGGEFRYFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 379  TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGS 438
            TADRCPLRLTG AQNQGAGAPHQGRVFATN+TEAE+AGT+VTGTLPVLGHYALVLF SGS
Sbjct: 361  TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTIVTGTLPVLGHYALVLFYSGS 420

Query: 439  SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLD 498
            SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTL+VLD
Sbjct: 421  SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 499  MLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLL 558
            MLDFDVILGMDWLAANHASIDCSRKEV FNPPSMASFKFKG GS+SLPQVISAIRASKLL
Sbjct: 481  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 559  SQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 618
            SQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELE GTVPI
Sbjct: 541  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELESGTVPI 600

Query: 619  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 678
            SRAPYRMAPAELK+LKVQLQELLDKG                              ELNK
Sbjct: 601  SRAPYRMAPAELKDLKVQLQELLDKG------------------------------ELNK 660

Query: 679  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIV 738
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT FRSRYGHYEFIV
Sbjct: 661  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTTFRSRYGHYEFIV 720

Query: 739  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNK 798
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRD K
Sbjct: 721  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDYK 780

Query: 799  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 858
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL GYYR
Sbjct: 781  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLVGYYR 840

Query: 859  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 918
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 841  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 900

Query: 919  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 978
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 901  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 960

Query: 979  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK---------- 1038
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK          
Sbjct: 961  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSVALITR 1020

Query: 1039 -----------------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1098
                                   LA+L VQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  
Sbjct: 1021 QAPLHRDLERAEIAVSMGAVTMQLARLAVQPTLRQRIIDAQGNDPYLVEKRGLVEAGQTA 1080

Query: 1099 EFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMK 1158
            EFS+SSDGGLLFERRLCVPSDSAVK ELLSEAHSSPFSMHPGSTK+YQDLKRVYWWRNMK
Sbjct: 1081 EFSLSSDGGLLFERRLCVPSDSAVKIELLSEAHSSPFSMHPGSTKIYQDLKRVYWWRNMK 1140

Query: 1159 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWV 1218
            REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWV
Sbjct: 1141 REVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWV 1200

Query: 1219 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTA 1278
            VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFT KFWKGLQTA
Sbjct: 1201 VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTA 1260

Query: 1279 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1338
            MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI
Sbjct: 1261 MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATI 1320

Query: 1339 GMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1398
            GMAPFEALYG+CCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV
Sbjct: 1321 GMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADV 1380

Query: 1399 RRKDLEFEVRDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1458
            RRKDLEFEV DKVFLKVAPMRGV+RFER+GKLSPRFVGPFEILERIGPVAYRLALPPSLS
Sbjct: 1381 RRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLS 1440

Query: 1459 TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1474
            TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTE+PV+VLAREVK LRN+E PLVK
Sbjct: 1441 TVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYTERPVKVLAREVKTLRNKEIPLVK 1469

[Close]
BLAST of IVF0006205 vs. NCBI nr
Match: KAA0040188.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2702 bits (7005), Expect = 0.0
Identity = 1374/1490 (92.21%), Postives = 1386/1490 (93.02%), Query Frame = 0 

Query: 18   EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMR 77
            EMPPRRGARRGGRG   RGAGRVQPEVQPVA+ATDPAAPV                    
Sbjct: 156  EMPPRRGARRGGRG---RGAGRVQPEVQPVAKATDPAAPV-------------------- 215

Query: 78   EQQQPAPPAPAPTPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQL 137
                                     VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQL
Sbjct: 216  -------------------------VPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQL 275

Query: 138  WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYA 197
            WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQI WQQFKESFY+
Sbjct: 276  WLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQIMWQQFKESFYS 335

Query: 198  KFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLD 257
            KFFSASLRDA+RQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARADKFVRGLRLD
Sbjct: 336  KFFSASLRDAERQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARADKFVRGLRLD 395

Query: 258  IQGLVRAFRPATHADALRLAVDLSLQERANSSKAAGRGSTSGQKRKAEQQPVPVPQRNFR 317
            IQGLVRAFRPATHADALRLAVDLSLQERANSSK AGRGSTSGQKRKAEQQPVPVPQRNFR
Sbjct: 396  IQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFR 455

Query: 318  SGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL 377
            S GEFRRFQQKPFE GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL
Sbjct: 456  SCGEFRRFQQKPFEVGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRL 515

Query: 378  TGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 437
            TGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF
Sbjct: 516  TGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAF 575

Query: 438  VLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILG 497
            VLHARLEVEPLHHVLSVSTPS ECMLSKEKVKACQIEIA HVIEVTLLVLDMLDFDVILG
Sbjct: 576  VLHARLEVEPLHHVLSVSTPSRECMLSKEKVKACQIEIADHVIEVTLLVLDMLDFDVILG 635

Query: 498  MDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISAIRASKLLSQGTWGILA 557
            MDWLAANHASIDCSRKEV FNPPSMASFKFKG GSRSLPQVISAIRASKLLSQGTWGILA
Sbjct: 636  MDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILA 695

Query: 558  SVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 617
            SVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP
Sbjct: 696  SVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAP 755

Query: 618  AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 677
            AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL
Sbjct: 756  AELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPL 815

Query: 678  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP 737
            PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP
Sbjct: 816  PRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAP 875

Query: 738  AVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCE 797
            AVFMDLMNRVF+EFLDTFVIVFIDDILIYSK EAEHEEHLRIVLQTLRDNKLYAKFSKCE
Sbjct: 876  AVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQTLRDNKLYAKFSKCE 935

Query: 798  FWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 857
            FWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI
Sbjct: 936  FWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRI 995

Query: 858  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 917
            ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLG V
Sbjct: 996  ATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGFV 1055

Query: 918  LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYF 977
            LMQQGKVVAYASRQLKSHEQNYPTHDLELAAV+FALKIWRHYLYGEKIQIFTDHKSLKYF
Sbjct: 1056 LMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGEKIQIFTDHKSLKYF 1115

Query: 978  FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK------------------- 1037
            FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK                   
Sbjct: 1116 FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRHAPLHRDLE 1175

Query: 1038 --------------LAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISSDGG 1097
                          LAQLTVQPTLRQRII AQSNDPYLVEKRGLAEAGQA  FSISSDGG
Sbjct: 1176 RAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAEAGQAEGFSISSDGG 1235

Query: 1098 LLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK 1157
            L+FERRLCVPSDSA+K ELLSEAHSSPF MHPGSTKMYQDLKRVYWWRNMKREVAEFVS+
Sbjct: 1236 LVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYWWRNMKREVAEFVSR 1295

Query: 1158 CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLKGFTVIWVVVDRLTKSA 1217
            CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+GFTVIWVVVDRLTKSA
Sbjct: 1296 CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSA 1355

Query: 1218 HFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGTRLDFST 1277
            HFVPGKSTY ASKWAQLYMSEIVRLHGVPVSIVSDRDARFT +FWKGLQTAMGTRLDFST
Sbjct: 1356 HFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWKGLQTAMGTRLDFST 1415

Query: 1278 AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1337
            AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
Sbjct: 1416 AFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 1475

Query: 1338 GKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEV 1397
             KCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEV
Sbjct: 1476 DKCCRSLVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEV 1535

Query: 1398 RDKVFLKVAPMRGVLRFERKGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 1457
             DKVFLKVAPMRGVLRFER+GKLSPRFVG FEILERIGPVAYR+ALPPSLSTVHDVFHVS
Sbjct: 1536 GDKVFLKVAPMRGVLRFERRGKLSPRFVGSFEILERIGPVAYRVALPPSLSTVHDVFHVS 1595

Query: 1458 MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRETPLVK 1474
            MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNRE PLVK
Sbjct: 1596 MLRKYVPDPSHVVDYEPLEIDENLSYTEQPVEVLAREVKMLRNREIPLVK 1597

[Close]
BLAST of IVF0006205 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 8.5e-27
Identity = 59/131 (45.04%), Postives = 83/131 (63.36%), Query Frame = 0 

Query: 776 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 835
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 836 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 895
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 896 LTVPDGSGSFV 905
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:
BLAST of IVF0006205 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0CT416.3e-14433.71Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT346.3e-14433.71Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT356.3e-14433.71Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT366.3e-14433.71Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT376.3e-14433.71Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of IVF0006205 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3300.0e+0092.80Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7UDB10.0e+0094.27Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10... [more]
A0A5A7UAA80.0e+0092.75Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... [more]
A0A5A7VJE20.0e+0091.86Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21... [more]
A0A5A7TB420.0e+0092.10Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11... [more]
BLAST of IVF0006205 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048687.10.092.80pol protein [Cucumis melo var. makuwa][more]
KAA0053234.10.094.27DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0051357.10.092.75pol protein [Cucumis melo var. makuwa][more]
KAA0066456.10.091.86pol protein [Cucumis melo var. makuwa][more]
KAA0040188.10.092.21pol protein [Cucumis melo var. makuwa][more]
BLAST of IVF0006205 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.18.5e-2745.04DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 675..810
e-value: 8.4E-94
score: 314.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 820..909
e-value: 2.2E-30
score: 106.5
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 901..997
e-value: 7.2E-34
score: 116.3
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 1077..1133
e-value: 8.0E-17
score: 61.1
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 650..809
e-value: 2.5E-28
score: 99.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 631..810
score: 11.233002
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 396..526
e-value: 1.3E-21
score: 78.7
IPR021109Aspartic peptidase domain superfamilySUPERFAMILY50630Acid proteasescoord: 413..509
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 159..255
e-value: 3.7E-15
score: 56.0
NoneNo IPR availableGENE3D1.10.340.70coord: 1043..1132
e-value: 1.0E-17
score: 66.2
NoneNo IPR availablePFAMPF08284RVP_2coord: 391..519
e-value: 1.4E-41
score: 141.5
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 596..735
e-value: 8.4E-94
score: 314.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..54
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 121..1233
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 121..1233
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 442..502
e-value: 2.85437E-12
score: 61.9688
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 904..1018
e-value: 2.15745E-58
score: 195.019
NoneNo IPR availableCDDcd01647RT_LTRcoord: 634..810
e-value: 1.37631E-93
score: 297.585
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1142..1349
e-value: 2.4E-44
score: 153.0
IPR001969Aspartic peptidase, active sitePROSITEPS00141ASP_PROTEASEcoord: 422..433
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 360..374
score: 9.438442
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1144..1307
score: 18.581999
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 574..1003
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 1145..1304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006205.2IVF0006205.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding