IVF0006163 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACATTCTAATCCTAATATCTTATAAGTACACATTGATCTCCATAACTATGTACACTTCACATACTATAAGCAGCTGCAGCTTAAACTCCCCTTGAGAGTGTTCTCCAATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAAGGAGCTTCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTTAAGAGTTTTGGATTCCAATTCCCTCTCCCTTGGTTTGAATTTGAAGCATAATGAAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTCATGGTGAGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAGATAATTTCTTCACCTAGTATTTCTGTTAGCTTTATTTGCTTGGTTCTCTCCCCACCTAAGAATGAAAAAACGTGTGTTGAATTGATATCTGATGTGATCAATATGCATTCTATTGATGATGTCCTAGACATTTTGTAAGATGTCTATTTGCTTGGTTAGTTTAGCTCCAGGAATGTGCATAATGAGAGAGAGAGAGAGGGAAGGAAGGGAAGTGATGGAAAAAACAACTCTTAAGTGAGACCATGTCTTTTACCAATTCCATTATGTTTAAATCTCTCTCTTTGGGTATCCTAGTTTCAACATTCTTCTCTGTATGAAAGCTCTATGTCTATGTCAAGGTGTGCATAAA AAAACATTCTAATCCTAATATCTTATAAGTACACATTGATCTCCATAACTATGTACACTTCACATACTATAAGCAGCTGCAGCTTAAACTCCCCTTGAGAGTGTTCTCCAATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAAGGAGCTTCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTTAAGAGTTTTGGATTCCAATTCCCTCTCCCTTGGTTTGAATTTGAAGCATAATGAAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTCATGGTGAGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAGATAATTTCTTCACCTAGTATTTCTGTTAGCTTTATTTGCTTGGTTCTCTCCCCACCTAAGAATGAAAAAACGTGTGTTGAATTGATATCTGATGTGATCAATATGCATTCTATTGATGATGTCCTAGACATTTTGTAAGATGTCTATTTGCTTGGTTAGTTTAGCTCCAGGAATGTGCATAATGAGAGAGAGAGAGAGGGAAGGAAGGGAAGTGATGGAAAAAACAACTCTTAAGTGAGACCATGTCTTTTACCAATTCCATTATGTTTAAATCTCTCTCTTTGGGTATCCTAGTTTCAACATTCTTCTCTGTATGAAAGCTCTATGTCTATGTCAAGGTGTGCATAAA ATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTCAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAAGGAGCTTCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTTAAGAGTTTTGGATTCCAATTCCCTCTCCCTTGGTTTGAATTTGAAGCATAATGAAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTCATGGTGAGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAG MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTLRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDTKFGPENSFMVSTLRSFDTNVDTTLHL Homology
BLAST of IVF0006163 vs. ExPASy TrEMBL
Match: A0A5D3E685 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00780 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.4e-62 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of IVF0006163 vs. ExPASy TrEMBL
Match: A0A0A0K617 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.7e-48 Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of IVF0006163 vs. ExPASy TrEMBL
Match: G7KEN3 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11418701 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0
BLAST of IVF0006163 vs. ExPASy TrEMBL
Match: A0A2N9FNY6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16854 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.8e-14 Identity = 60/132 (45.45%), Postives = 79/132 (59.85%), Query Frame = 0
BLAST of IVF0006163 vs. ExPASy TrEMBL
Match: A0A6P6A4C9 (uncharacterized protein LOC111306214 OS=Durio zibethinus OX=66656 GN=LOC111306214 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13 Identity = 58/132 (43.94%), Postives = 78/132 (59.09%), Query Frame = 0
BLAST of IVF0006163 vs. NCBI nr
Match: KAA0048752.1 (hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa] >TYK31583.1 hypothetical protein E5676_scaffold172G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 243 bits (620), Expect = 8.02e-81 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of IVF0006163 vs. NCBI nr
Match: KAE8646145.1 (hypothetical protein Csa_016195, partial [Cucumis sativus]) HSP 1 Score: 172 bits (437), Expect = 3.47e-53 Identity = 94/109 (86.24%), Postives = 99/109 (90.83%), Query Frame = 0
BLAST of IVF0006163 vs. NCBI nr
Match: KAG6589104.1 (hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105 bits (261), Expect = 5.00e-26 Identity = 72/121 (59.50%), Postives = 89/121 (73.55%), Query Frame = 0
BLAST of IVF0006163 vs. NCBI nr
Match: KAG6572236.1 (hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.8 bits (242), Expect = 1.72e-23 Identity = 70/131 (53.44%), Postives = 80/131 (61.07%), Query Frame = 0
BLAST of IVF0006163 vs. NCBI nr
Match: XP_003617949.1 (uncharacterized protein LOC11418701 [Medicago truncatula] >AET00908.1 hypothetical protein MTR_5g097300 [Medicago truncatula] >RHN58110.1 hypothetical protein MtrunA17_Chr5g0447571 [Medicago truncatula]) HSP 1 Score: 85.5 bits (210), Expect = 1.33e-18 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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