Homology
BLAST of IVF0006141 vs. ExPASy Swiss-Prot
Match:
P69243 (DNA-directed RNA polymerase 3A, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPOT3-SYL PE=3 SV=1)
HSP 1 Score: 1374.4 bits (3556), Expect = 0.0e+00
Identity = 687/995 (69.05%), Postives = 824/995 (82.81%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCER----------KTQTSFTSTFNSSLSSVS 60
M +TAS+ P+ PT +W+ ++ Q + +SSL + S
Sbjct: 1 MASTASYSPS-------------PTSQWRTQKLPKRFNFYVIHNQEFGKLSQSSSLPTSS 60
Query: 61 FPINFDSTSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRG----ESGQRIFI 120
FP + P P+ +++ T + NL+ + +I G ES +R+FI
Sbjct: 61 FP---KTLKLPVIQMPINNNIQSQTTVCVSTDENLE-ELVNLQKIANGVLTKESNKRVFI 120
Query: 121 QDPPWIASLFLKGLY---KCVQKEVKLEFMKIE-KRKYNLLRRRQIKAETEAWEKMVKEY 180
QDPPW++SLF+ L+ K VQ V+ EF +IE +R+Y +LRRRQIKAETEAWE+MV+EY
Sbjct: 121 QDPPWVSSLFMNSLFVRAKQVQ-GVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEY 180
Query: 181 KELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSAD 240
+ELEREMCEKKLAPNLPYVK L LGWFEPL+QAIEKEQ + + K +AAFAPHI+ L AD
Sbjct: 181 RELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPAD 240
Query: 241 KLAVIVMYKMMGLLMV-AQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPA 300
K+AVIVM+K+MGLLM+ +++ CVQVVQAAVQIG A+E EVRI +FLEK + Q+ A
Sbjct: 241 KMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGA 300
Query: 301 DT-ECLSKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIES 360
+ E +S+E +LRKRV LI+R R+ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+
Sbjct: 301 QSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTET 360
Query: 361 AFIQPPVSQSADSPPDVRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHM 420
A++QPPV QSAD+PPD+RPAF H F+ + PG++ VKKYGVIECDP+V+AG+D+T K M
Sbjct: 361 AYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQM 420
Query: 421 LIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDML 480
+IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS RQQDA++++ KQMQ+V+EALD L
Sbjct: 421 MIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTL 480
Query: 481 GSTKWRVNRRVLSVVESLWAQGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKI 540
GSTKWRVN+R+LSVVES+WA GGN AGLVDRKDVPIPE D+ E ++W+W ++K+KKI
Sbjct: 481 GSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKI 540
Query: 541 NQELHSQRCDVELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEF 600
NQELHSQRCD ELKLSVARK+KDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG+LEF
Sbjct: 541 NQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEF 600
Query: 601 AEGRPLGKSGLHWLKIHLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWL 660
AEGRPLGKSGL WLKIHLA+L+AGG+EKL YD RLAFV++H+D+I DSA+NP+NG+RWWL
Sbjct: 601 AEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWL 660
Query: 661 TAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNL 720
AEDPFQCLAAC+NLSEALKSS+PHTV S+LPIHQDGSCNGLQHYAALGRD++EAAAVNL
Sbjct: 661 NAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNL 720
Query: 721 VAGEKPADVYSEIAARVHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYG 780
VAG+KPADVY+EIA RV I+ D+ KDP T+PNA LAKLLIDQVDRKLVKQTVMTSVYG
Sbjct: 721 VAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYG 780
Query: 781 VTYVGAREQIKKRLEEKGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAK 840
VTYVGAREQIK+RLEEKGLI DDRLLF ASCYAAKVTLAALGE+F+AARG M WLGDCAK
Sbjct: 781 VTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAK 840
Query: 841 VIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNF 900
VIA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLAL+REG++V+VRKQRTAFPPNF
Sbjct: 841 VIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNF 900
Query: 901 VHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESL 960
VHSLDGSHMM+TA+ACRDAGL+FAGVHDSFWTHACDVD+MN ILREKFVELYSMP+LE L
Sbjct: 901 VHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDL 960
Query: 961 LEGFETTYPGLTFPSLPERGDFDLQEVLRSPYFFN 976
LE F+ +YP LTFP LP+RGDFDL EVL SPYFFN
Sbjct: 961 LESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977
BLAST of IVF0006141 vs. ExPASy Swiss-Prot
Match:
P69242 (DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=RPOT3 PE=2 SV=1)
HSP 1 Score: 1374.4 bits (3556), Expect = 0.0e+00
Identity = 687/995 (69.05%), Postives = 824/995 (82.81%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCER----------KTQTSFTSTFNSSLSSVS 60
M +TAS+ P+ PT +W+ ++ Q + +SSL + S
Sbjct: 1 MASTASYSPS-------------PTSQWRTQKLPKRFNFYVIHNQEFGKLSQSSSLPTSS 60
Query: 61 FPINFDSTSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRG----ESGQRIFI 120
FP + P P+ +++ T + NL+ + +I G ES +R+FI
Sbjct: 61 FP---KTLKLPVIQMPINNNIQSQTTVCVSTDENLE-ELVNLQKIANGVLTKESNKRVFI 120
Query: 121 QDPPWIASLFLKGLY---KCVQKEVKLEFMKIE-KRKYNLLRRRQIKAETEAWEKMVKEY 180
QDPPW++SLF+ L+ K VQ V+ EF +IE +R+Y +LRRRQIKAETEAWE+MV+EY
Sbjct: 121 QDPPWVSSLFMNSLFVRAKQVQ-GVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEY 180
Query: 181 KELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSAD 240
+ELEREMCEKKLAPNLPYVK L LGWFEPL+QAIEKEQ + + K +AAFAPHI+ L AD
Sbjct: 181 RELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPAD 240
Query: 241 KLAVIVMYKMMGLLMV-AQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPA 300
K+AVIVM+K+MGLLM+ +++ CVQVVQAAVQIG A+E EVRI +FLEK + Q+ A
Sbjct: 241 KMAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGA 300
Query: 301 DT-ECLSKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIES 360
+ E +S+E +LRKRV LI+R R+ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+
Sbjct: 301 QSQEDMSRETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTET 360
Query: 361 AFIQPPVSQSADSPPDVRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHM 420
A++QPPV QSAD+PPD+RPAF H F+ + PG++ VKKYGVIECDP+V+AG+D+T K M
Sbjct: 361 AYVQPPVDQSADTPPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQM 420
Query: 421 LIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDML 480
+IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS RQQDA++++ KQMQ+V+EALD L
Sbjct: 421 MIPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTL 480
Query: 481 GSTKWRVNRRVLSVVESLWAQGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKI 540
GSTKWRVN+R+LSVVES+WA GGN AGLVDRKDVPIPE D+ E ++W+W ++K+KKI
Sbjct: 481 GSTKWRVNKRILSVVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKI 540
Query: 541 NQELHSQRCDVELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEF 600
NQELHSQRCD ELKLSVARK+KDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG+LEF
Sbjct: 541 NQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEF 600
Query: 601 AEGRPLGKSGLHWLKIHLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWL 660
AEGRPLGKSGL WLKIHLA+L+AGG+EKL YD RLAFV++H+D+I DSA+NP+NG+RWWL
Sbjct: 601 AEGRPLGKSGLRWLKIHLASLYAGGIEKLCYDARLAFVENHIDDILDSANNPLNGNRWWL 660
Query: 661 TAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNL 720
AEDPFQCLAAC+NLSEALKSS+PHTV S+LPIHQDGSCNGLQHYAALGRD++EAAAVNL
Sbjct: 661 NAEDPFQCLAACINLSEALKSSSPHTVFSHLPIHQDGSCNGLQHYAALGRDSMEAAAVNL 720
Query: 721 VAGEKPADVYSEIAARVHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYG 780
VAG+KPADVY+EIA RV I+ D+ KDP T+PNA LAKLLIDQVDRKLVKQTVMTSVYG
Sbjct: 721 VAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLIDQVDRKLVKQTVMTSVYG 780
Query: 781 VTYVGAREQIKKRLEEKGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAK 840
VTYVGAREQIK+RLEEKGLI DDRLLF ASCYAAKVTLAALGE+F+AARG M WLGDCAK
Sbjct: 781 VTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAK 840
Query: 841 VIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNF 900
VIA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQVLAL+REG++V+VRKQRTAFPPNF
Sbjct: 841 VIASENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQVLALQREGDTVEVRKQRTAFPPNF 900
Query: 901 VHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESL 960
VHSLDGSHMM+TA+ACRDAGL+FAGVHDSFWTHACDVD+MN ILREKFVELYSMP+LE L
Sbjct: 901 VHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSMPILEDL 960
Query: 961 LEGFETTYPGLTFPSLPERGDFDLQEVLRSPYFFN 976
LE F+ +YP LTFP LP+RGDFDL EVL SPYFFN
Sbjct: 961 LESFQNSYPALTFPPLPKRGDFDLVEVLESPYFFN 977
BLAST of IVF0006141 vs. ExPASy Swiss-Prot
Match:
Q8L6J1 (DNA-directed RNA polymerase 3B, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPOT3-TOM PE=2 SV=2)
HSP 1 Score: 1366.3 bits (3535), Expect = 0.0e+00
Identity = 689/995 (69.25%), Postives = 825/995 (82.91%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCER----------KTQTSFTSTFNSSLSSVS 60
M +TAS+ P+ PT +W+ ++ Q + +SSLS+ S
Sbjct: 1 MASTASYSPS-------------PTSQWRTQKLPKRFNFYVIHNQEFGKLSQSSSLSTSS 60
Query: 61 FP--INFDSTSQPFHLQPLADSVHENFTETLDNSMNLQ-IPTSEIHQITRGESGQRIFIQ 120
FP + P + +V + E L+ +NLQ IP +++ ES +R+FIQ
Sbjct: 61 FPKTLKLPVIHMPINNIQSQTTVCVSTDENLEELVNLQKIPNGFLNK----ESNKRVFIQ 120
Query: 121 DPPWIASLFLKGLY---KCVQKEVKLEFMKIE-KRKYNLLRRRQIKAETEAWEKMVKEYK 180
DPPW++SLF+ L+ K VQ V+ EF +IE +R+Y +LRRRQIKAETEAWE+MV+EY+
Sbjct: 121 DPPWVSSLFMNSLFVRAKQVQ-GVRREFREIERRRRYAMLRRRQIKAETEAWEQMVEEYR 180
Query: 181 ELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADK 240
ELEREMCEKKLAPNLPYVK L LGWFEPL+QAIEKEQ + + K +AAFAPHI+ L ADK
Sbjct: 181 ELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFAPHIDSLPADK 240
Query: 241 LAVIVMYKMMGLLMV-AQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPAD 300
+AVIVM+K+MGLLM+ +++ CVQVVQAAVQIG A+E EVRI +FLEK + Q+ A
Sbjct: 241 MAVIVMHKLMGLLMMGGKEERCVQVVQAAVQIGMAVENEVRIHNFLEKTKKLQKHMTGAQ 300
Query: 301 T-ECLSKEKEVLRKRVNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESA 360
+ E +SKE +LRKRV LI+R R+ EV+KL+K EE ++WGRDTQAKLG RL+ELL E+A
Sbjct: 301 SQEDMSKETMILRKRVKSLIKRNRVVEVRKLMKSEEPESWGRDTQAKLGCRLLELLTETA 360
Query: 361 FIQPPVSQSADSPPDVRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHML 420
++Q PV QSAD+PPD+RPAF H FK + PG+N VKKYGVIECDP+V+AG+D+T K M+
Sbjct: 361 YVQRPVDQSADTPPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMM 420
Query: 421 IPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLG 480
IPY+PMLVPPKKW+GYDKGG+ FLPSY+MRTHGS RQQDA++ + KQMQ+V+EALD LG
Sbjct: 421 IPYVPMLVPPKKWRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLG 480
Query: 481 STKWRVNRRVLSVVESLWAQGGNTAGLVDRKDVPIPE-KQLGDLTETQEWRWSMKKAKKI 540
STKWRVN+R+L+VVES+WA GGN AGLVDRKDVPIPE D+ E ++W+W ++K+KKI
Sbjct: 481 STKWRVNKRILNVVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKI 540
Query: 541 NQELHSQRCDVELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEF 600
NQELHSQRCD ELKLSVARK+KDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG+LEF
Sbjct: 541 NQELHSQRCDTELKLSVARKLKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEF 600
Query: 601 AEGRPLGKSGLHWLKIHLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWL 660
AEGRPLGKSGL WLKIHLA+L+AGGVEKL YD RLAFV++H+ +I DSA+NP+NG+RWWL
Sbjct: 601 AEGRPLGKSGLRWLKIHLASLYAGGVEKLCYDARLAFVENHIHDILDSANNPLNGNRWWL 660
Query: 661 TAEDPFQCLAACMNLSEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNL 720
AEDPFQCLAAC+NLSEALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRD++EAAAVNL
Sbjct: 661 NAEDPFQCLAACINLSEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDSMEAAAVNL 720
Query: 721 VAGEKPADVYSEIAARVHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYG 780
VAGEKPADVY+EIA RV I+ D+ KDP +PNA LAKLLIDQVDRKLVKQTVMTSVYG
Sbjct: 721 VAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLIDQVDRKLVKQTVMTSVYG 780
Query: 781 VTYVGAREQIKKRLEEKGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAK 840
VTYVGAREQIK+RLEEKGLI DDRLLF ASCYAAKVTLAALGE+F+AARG M WLGDCAK
Sbjct: 781 VTYVGAREQIKRRLEEKGLIDDDRLLFTASCYAAKVTLAALGELFQAARGTMTWLGDCAK 840
Query: 841 VIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNF 900
VIA +NQPVRWTTPLGLPVVQPY+K++RH+IRTSLQ+LAL+REG++V+VRKQRTAFPPNF
Sbjct: 841 VIALENQPVRWTTPLGLPVVQPYFKTQRHVIRTSLQILALQREGDAVEVRKQRTAFPPNF 900
Query: 901 VHSLDGSHMMLTALACRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESL 960
VHSLDGSHMM+TA+ACRDAGL+FAGVHDSFWTHACDVD+MN ILREKFVELYS+P+LE L
Sbjct: 901 VHSLDGSHMMMTAVACRDAGLQFAGVHDSFWTHACDVDQMNRILREKFVELYSLPILEDL 960
Query: 961 LEGFETTYPGLTFPSLPERGDFDLQEVLRSPYFFN 976
LE F+ +YP LTFP LP+RGDF+L+EVL SPYFFN
Sbjct: 961 LENFQKSYPALTFPPLPKRGDFNLREVLESPYFFN 977
BLAST of IVF0006141 vs. ExPASy Swiss-Prot
Match:
O24600 (DNA-directed RNA polymerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPOT3 PE=2 SV=1)
HSP 1 Score: 1344.3 bits (3478), Expect = 0.0e+00
Identity = 670/970 (69.07%), Postives = 799/970 (82.37%), Query Frame = 0
Query: 21 WKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQPFHLQPLADSV--HENFTET 80
W KP R+ F + +S+ S + STS H +P+++SV H N E+
Sbjct: 28 WLKPPPSSALFRRKTLPFFERHSLPISASSSSSSSSSTSLSVHEKPISNSVHFHGNLIES 87
Query: 81 LDNSMNLQIPT----SEIHQI-----TRGESG-QRIFIQDPPWIASLFLKGLYKCVQKEV 140
+N + T S I ++ G SG +R+F+QDPPWI++LFLKGL K V + +
Sbjct: 88 FENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTL 147
Query: 141 KLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGW 200
K+E I+KRK++ LRRRQ+K ETEAWE+MV EY++LE+EMCEK LAPNLPYVK +FLGW
Sbjct: 148 KIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGW 207
Query: 201 FEPLKQAIEKEQKTQ--RSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQQDCCVQ 260
F+PLK IE+EQK Q +SKK +AA+APHIELL ADK+AVIVM+KMMGL+M +D C+Q
Sbjct: 208 FQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQ 267
Query: 261 VVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGLIRRRRL 320
VVQAAV IG AIEQEVRI +FL++ R N D++ KEK++LRKRVN LIRR+R+
Sbjct: 268 VVQAAVSIGIAIEQEVRIHNFLKRTRKNN----AGDSQEELKEKQLLRKRVNSLIRRKRI 327
Query: 321 KEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFK 380
+ K++K E K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF H FK
Sbjct: 328 IDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 387
Query: 381 PVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLP 440
V K PG V++YGVIECD ++LAGLD++AKHMLIPY+PMLVPPK+WKGYDKGG+ FLP
Sbjct: 388 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 447
Query: 441 SYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQGGNTA 500
SY+MRTHGS +QQDA+K+IS K +VFEALD LG+TKWRVNR +L VVE LWA GGN A
Sbjct: 448 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 507
Query: 501 GLVDRKDVPIPEKQLG-DLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEE 560
GLV+R+DVPIPEK D E Q W+WS +KA KIN+E HS RCDVELKLSVARKMKDEE
Sbjct: 508 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 567
Query: 561 GFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLHAGG 620
GFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG LEFAEGRPLGKSGLHWLKIHLANL+AGG
Sbjct: 568 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 627
Query: 621 VEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPH 680
VEKLS+D RLAFV++HLD+I DSA NP++G RWWL AEDPFQCLAAC+ L++ALKS +P+
Sbjct: 628 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 687
Query: 681 TVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDA 740
+VIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAGEKPADVYSEI+ RVH IM +D+
Sbjct: 688 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 747
Query: 741 NKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLISDDRL 800
+KDP +NP A+LAK+LI QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLEEKG+I+D+R+
Sbjct: 748 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 807
Query: 801 LFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYK 860
LF A+CY+AKVTLAALGEIFEAAR IM WLGDCAK+IA DN PVRW TPLGLPVVQPY +
Sbjct: 808 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 867
Query: 861 SERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAG 920
SERHLIRTSLQVLAL+REGN+VDVRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGL FAG
Sbjct: 868 SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 927
Query: 921 VHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERGDFDLQ 976
VHDS+WTHACDVD MN ILREKFVELY+ P+LE LL+ F+ +YP L FP +P+RGDFDL+
Sbjct: 928 VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 987
BLAST of IVF0006141 vs. ExPASy Swiss-Prot
Match:
Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)
HSP 1 Score: 1148.7 bits (2970), Expect = 0.0e+00
Identity = 556/842 (66.03%), Postives = 687/842 (81.59%), Query Frame = 0
Query: 138 RKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIE 197
RKY L+RRQ+K ETEAWE+ KEYKEL +MCE+KLAPNLPYVK+LFLGWFEPL+ I
Sbjct: 181 RKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIA 240
Query: 198 KEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQQDCCVQVVQAAVQIGGA 257
+EQ+ K KAA+A ++ L AD +AVI M+K+MGLLM +VVQAA+ IG A
Sbjct: 241 EEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDA 300
Query: 258 IEQEVRIQSFLEKARSN--QRTKVPADTECLSKEKEVLRKRVNGLIRRRRLKEVQKLLKK 317
IEQEVRI +FLEK + ++ K D E +++E+E LRK+V L+++++L+ V +++++
Sbjct: 301 IEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRR 360
Query: 318 -EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFKPVAKTPGQ 377
++ K WG+D +AK+GSRLIELL+++A+IQPP +Q A PPD+RPAF H + VAK +
Sbjct: 361 QDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKET-K 420
Query: 378 NFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTHG 437
+ ++YG+I+CD +V GL++TA+HM+IPY+PMLVPP KW GYDKGGH +LPSYVMRTHG
Sbjct: 421 SASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHG 480
Query: 438 SSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQGGNTAGLVDRKDV 497
+ +Q++A+K S Q+Q VFEALD LGSTKWR+N+RVLSV++ +WA GG A LVDR D
Sbjct: 481 ARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDA 540
Query: 498 PIPEK-QLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHNV 557
P+PE+ D +WRW +K KK N+E HSQRCD+ELKL+VARKMKDEEGF+YPHNV
Sbjct: 541 PLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNV 600
Query: 558 DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLHAGGVEKLSYDR 617
DFRGRAYPMHPHLNHL SD+CRGVL FAEGRPLG+SGL WLKIHLANL AGGVEKLS +
Sbjct: 601 DFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEG 660
Query: 618 RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLPI 677
R+AF ++H+D+IFDSA P+ G RWWL AEDPFQCLA C+NLSEA++SS+P T IS++P+
Sbjct: 661 RIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPV 720
Query: 678 HQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDANKDPTTNP 737
HQDGSCNGLQHYAALGRD L AAAVNLVAGEKPADVYS IAARV IM RDA +DP P
Sbjct: 721 HQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFP 780
Query: 738 NASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLISDDRLLFRASCYA 797
+A A+ L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+G I+DD LF A+CYA
Sbjct: 781 DAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYA 840
Query: 798 AKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIRT 857
AKVTL ALGE+FEAAR IM WLG+CAK+IA +N+PVRWTTPLGLPVVQPY K RHLI+T
Sbjct: 841 AKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKT 900
Query: 858 SLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWTH 917
SLQ+L L++E V V++QRTAFPPNF+HSLDGSHMM+TA+ACR AGL FAGVHDS+WTH
Sbjct: 901 SLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTH 960
Query: 918 ACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERGDFDLQEVLRSPYF 976
ACDVD++N ILREKFVELY P+LE LLE F+T+YP L FP LPERGDFDL++VL SPYF
Sbjct: 961 ACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYF 1020
BLAST of IVF0006141 vs. ExPASy TrEMBL
Match:
A0A1S3BU26 (DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493541 PE=3 SV=1)
HSP 1 Score: 1950.6 bits (5052), Expect = 0.0e+00
Identity = 971/975 (99.59%), Postives = 973/975 (99.79%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ
Sbjct: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
Query: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITR ESGQRIFIQDPPWIASLFLKGL
Sbjct: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITREESGQRIFIQDPPWIASLFLKGL 120
Query: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
Query: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
Query: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNG
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGF 300
Query: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
Query: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
Query: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
Query: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
Query: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
L+AGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
Query: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
Query: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
Query: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
Query: 961 DFDLQEVLRSPYFFN 976
DF+LQEVLRSPYFFN
Sbjct: 961 DFNLQEVLRSPYFFN 975
BLAST of IVF0006141 vs. ExPASy TrEMBL
Match:
A0A5D3BDV2 (DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00250 PE=3 SV=1)
HSP 1 Score: 1941.0 bits (5027), Expect = 0.0e+00
Identity = 967/968 (99.90%), Postives = 967/968 (99.90%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ
Sbjct: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
Query: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL
Sbjct: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
Query: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
Query: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
Query: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
Query: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
Query: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
Query: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
Query: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
Query: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
Query: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
Query: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
Query: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
Query: 961 DFDLQEVL 969
DFDLQE L
Sbjct: 961 DFDLQENL 968
BLAST of IVF0006141 vs. ExPASy TrEMBL
Match:
A0A0A0LH38 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G036610 PE=3 SV=1)
HSP 1 Score: 1885.2 bits (4882), Expect = 0.0e+00
Identity = 934/975 (95.79%), Postives = 955/975 (97.95%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
MT TASFFPTLQAPIHGSNAWKKPTKRWKCERKT TSFTSTFNS LSSVSFP+NFDSTSQ
Sbjct: 1 MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDSTSQ 60
Query: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
HLQPLADSVHENFTETLDNSMNLQIP SEIHQITRGES +RIFIQDPPWIASLFLKGL
Sbjct: 61 SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
Query: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
YKCVQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELEREMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPY 180
Query: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
VK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLM+A
Sbjct: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
Query: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
QD CVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV ADTECL+KEKEVLRK+VNGL
Sbjct: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
Query: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
IRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPA
Sbjct: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
Query: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
FWHGFKPVAKTPGQNFVKKYGV+ECDPIVLAGLD+TAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
Query: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
QGGNTAGLVDRKDVPIPEK LGDLTE QEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
Query: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
Query: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
L+AGGVEKLSYD RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
Query: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
MIRDA+KDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEEKGLI
Sbjct: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
Query: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
SDDRL FRASCYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
Query: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
QPYYKSERHLIRTSLQVLAL+REGN VDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLP RG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
Query: 961 DFDLQEVLRSPYFFN 976
DFDLQEVL+SPYFFN
Sbjct: 961 DFDLQEVLKSPYFFN 975
BLAST of IVF0006141 vs. ExPASy TrEMBL
Match:
A0A6J1E061 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111024704 PE=3 SV=1)
HSP 1 Score: 1793.1 bits (4643), Expect = 0.0e+00
Identity = 892/979 (91.11%), Postives = 930/979 (94.99%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTF----NSSLSSVSFPINFD 60
MT+TASFFPTLQAPI+G NAW+KPTKR CER+T SFTSTF NS LSSVSFP N D
Sbjct: 1 MTSTASFFPTLQAPIYGGNAWRKPTKRCNCERRTHLSFTSTFNSLSNSPLSSVSFPTNSD 60
Query: 61 STSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLF 120
ST++P LQPLADSV ENFTETLDNSMNLQ+PT ES QRIFIQDPPWIASLF
Sbjct: 61 STAEPVRLQPLADSVQENFTETLDNSMNLQVPTR--------ESCQRIFIQDPPWIASLF 120
Query: 121 LKGLYKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAP 180
LKGLYK VQKEVKLEF +IEKRKYNLLRRRQIKAETEAWE+MV+EYKELEREMCEKKLAP
Sbjct: 121 LKGLYKSVQKEVKLEFKEIEKRKYNLLRRRQIKAETEAWERMVEEYKELEREMCEKKLAP 180
Query: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLL 240
NLPYVKTLFLGWFEPLKQAIEKEQ TQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLL
Sbjct: 181 NLPYVKTLFLGWFEPLKQAIEKEQNTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240
Query: 241 MVAQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKR 300
MVAQQD CVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTK+PAD +CLSKEKE+LRKR
Sbjct: 241 MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKIPADAQCLSKEKEILRKR 300
Query: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPD
Sbjct: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADCPPD 360
Query: 361 VRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKG 420
+RPAFWH FKPV KTPGQ VK YGVIECDPIVLAGLD+TAKH+LIPYIPMLVPPKKWKG
Sbjct: 361 IRPAFWHRFKPVTKTPGQKIVKTYGVIECDPIVLAGLDRTAKHVLIPYIPMLVPPKKWKG 420
Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
YDKGGH FLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE
Sbjct: 421 YDKGGHLFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
Query: 481 SLWAQGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLS 540
S+WAQGGNTAGLVDRKDVPIPE+ LGDLTE QEW+WS++KAKKINQELHSQRCDVELKLS
Sbjct: 481 SIWAQGGNTAGLVDRKDVPIPEQPLGDLTEMQEWKWSVRKAKKINQELHSQRCDVELKLS 540
Query: 541 VARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
VARKM+DEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI
Sbjct: 541 VARKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
Query: 601 HLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 660
HLANL+AGGVEKLSYDRRLAFVDDHLD+IFDSASNPVNG+RWWLTAEDPFQCLAAC+NLS
Sbjct: 601 HLANLYAGGVEKLSYDRRLAFVDDHLDSIFDSASNPVNGNRWWLTAEDPFQCLAACINLS 660
Query: 661 EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720
EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDT EAAAVNLVAGEKPADVY+EIAAR
Sbjct: 661 EALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTFEAAAVNLVAGEKPADVYTEIAAR 720
Query: 721 VHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 780
VH IMIRD NKDP TNPNA LAK+LIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE
Sbjct: 721 VHNIMIRDGNKDPATNPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 780
Query: 781 KGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 840
KGLISDDRLLFRA+CYAAKVTLAALGEIFEAARGIM WLGDCAKVIA DNQPVRWTTPLG
Sbjct: 781 KGLISDDRLLFRAACYAAKVTLAALGEIFEAARGIMSWLGDCAKVIAADNQPVRWTTPLG 840
Query: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 900
LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRK RTAFPPNFVHSLDGSHMMLTALAC
Sbjct: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKHRTAFPPNFVHSLDGSHMMLTALAC 900
Query: 901 RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 960
RDAGLRFAGVHDSFWTHACDVD+MN+ILRE FVELY+MPVLESLLEGFETTYPGLTFPSL
Sbjct: 901 RDAGLRFAGVHDSFWTHACDVDQMNVILRETFVELYNMPVLESLLEGFETTYPGLTFPSL 960
Query: 961 PERGDFDLQEVLRSPYFFN 976
P+RGDFDL+EVL SPYFFN
Sbjct: 961 PDRGDFDLREVLNSPYFFN 971
BLAST of IVF0006141 vs. ExPASy TrEMBL
Match:
A0A6J1I1C4 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111468549 PE=3 SV=1)
HSP 1 Score: 1751.5 bits (4535), Expect = 0.0e+00
Identity = 875/980 (89.29%), Postives = 923/980 (94.18%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTF----NSSLSSVSFPINFD 60
M +TASFFPT QA I+G NAW++P+KR KC+RKT SFTSTF NS +SSVSFPINFD
Sbjct: 1 MHSTASFFPTHQALIYGGNAWREPSKRCKCQRKTHLSFTSTFNSLSNSHISSVSFPINFD 60
Query: 61 STSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLF 120
ST++P LQP ADSV ENFTE LDNSMNLQI SEIHQIT GE QRIFI+DPPWIASLF
Sbjct: 61 STAEPLRLQPPADSVQENFTEALDNSMNLQISKSEIHQITPGEPCQRIFIRDPPWIASLF 120
Query: 121 LKGLYKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAP 180
LKGLYK +QK VKLEF +IEKRKYNLLRRRQ+KAETEAWEK V+EYKELEREMCEKKLAP
Sbjct: 121 LKGLYKSLQKGVKLEFREIEKRKYNLLRRRQLKAETEAWEKTVEEYKELEREMCEKKLAP 180
Query: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLL 240
NLPYVK+LFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSA+K+AVIVMYKMMGLL
Sbjct: 181 NLPYVKSLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSAEKMAVIVMYKMMGLL 240
Query: 241 MVAQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKR 300
MVAQQD CV VVQAAVQIG AIEQEVRIQSFL KARSNQRTKVPAD +C ++EKE+LRKR
Sbjct: 241 MVAQQDGCVLVVQAAVQIGSAIEQEVRIQSFL-KARSNQRTKVPADAQCSNQEKELLRKR 300
Query: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
VN LIRRRRLKEVQKLLKKEEFK WGRDTQAKLGSRLIELLIESAFIQPPV+QSADSPPD
Sbjct: 301 VNSLIRRRRLKEVQKLLKKEEFKDWGRDTQAKLGSRLIELLIESAFIQPPVTQSADSPPD 360
Query: 361 VRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKG 420
+RPAFWH FKPVAKTPG+N VK YGVIECDPIVL GLD+TAKHMLIPYIPML+PPKKWKG
Sbjct: 361 IRPAFWHKFKPVAKTPGKNIVKNYGVIECDPIVLTGLDRTAKHMLIPYIPMLIPPKKWKG 420
Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
YDKGGH FLPSYVMRTHGSSRQQDA+K ISGK MQKVFEALDMLGSTKWRVNRRVLSVVE
Sbjct: 421 YDKGGHLFLPSYVMRTHGSSRQQDALKKISGKPMQKVFEALDMLGSTKWRVNRRVLSVVE 480
Query: 481 SLWAQGGNTAGLVDRKDVPIPEKQL-GDLTETQEWRWSMKKAKKINQELHSQRCDVELKL 540
S+W QGGNTAGLVDRKDVPIPEK L GDLTE QEW+WSM+KAKKINQELHSQRCD+ELKL
Sbjct: 481 SIWEQGGNTAGLVDRKDVPIPEKPLGGDLTEMQEWKWSMRKAKKINQELHSQRCDIELKL 540
Query: 541 SVARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLK 600
SVARKMKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLK
Sbjct: 541 SVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLK 600
Query: 601 IHLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNL 660
IHLANL+AGGVEKLSYDRRLAFVDDHLD+IFDSASNPV GDRWWLTAEDPFQCLAAC+NL
Sbjct: 601 IHLANLYAGGVEKLSYDRRLAFVDDHLDSIFDSASNPVKGDRWWLTAEDPFQCLAACINL 660
Query: 661 SEALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAA 720
EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGE+ ADVYSEIAA
Sbjct: 661 FEALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEEFADVYSEIAA 720
Query: 721 RVHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLE 780
RVH IMIRD NKDPT NPNA LAK+LIDQVDRKLVKQTVMTSVYGVTYVGAREQIK+RLE
Sbjct: 721 RVHDIMIRDGNKDPTANPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLE 780
Query: 781 EKGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPL 840
EKG+ISDDRLLFRA+CYAAKVTLAALGEIFEAARGIM WLGDCAKVIA DNQPVRWTTPL
Sbjct: 781 EKGIISDDRLLFRAACYAAKVTLAALGEIFEAARGIMSWLGDCAKVIAADNQPVRWTTPL 840
Query: 841 GLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALA 900
GLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALA
Sbjct: 841 GLPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALA 900
Query: 901 CRDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPS 960
CRDAGLRFAGVHDSFWTHACDVD+MNLILREKFVELY+MPVLE+LLE FETTYPGLTFP
Sbjct: 901 CRDAGLRFAGVHDSFWTHACDVDQMNLILREKFVELYNMPVLETLLEDFETTYPGLTFPP 960
Query: 961 LPERGDFDLQEVLRSPYFFN 976
LPERG+FDL+EVL+S YFFN
Sbjct: 961 LPERGNFDLREVLKSRYFFN 979
BLAST of IVF0006141 vs. NCBI nr
Match:
XP_008452554.1 (PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis melo])
HSP 1 Score: 1939 bits (5022), Expect = 0.0
Identity = 971/975 (99.59%), Postives = 973/975 (99.79%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ
Sbjct: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
Query: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITR ESGQRIFIQDPPWIASLFLKGL
Sbjct: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITREESGQRIFIQDPPWIASLFLKGL 120
Query: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
Query: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
Query: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNG
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGF 300
Query: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
Query: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
Query: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
Query: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
Query: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
L+AGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
Query: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
Query: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
Query: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
Query: 961 DFDLQEVLRSPYFFN 975
DF+LQEVLRSPYFFN
Sbjct: 961 DFNLQEVLRSPYFFN 975
BLAST of IVF0006141 vs. NCBI nr
Match:
KAA0056119.1 (DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa] >TYJ96398.1 DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa])
HSP 1 Score: 1929 bits (4997), Expect = 0.0
Identity = 967/968 (99.90%), Postives = 967/968 (99.90%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ
Sbjct: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
Query: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL
Sbjct: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
Query: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
Query: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ
Sbjct: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
Query: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL
Sbjct: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
Query: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA
Sbjct: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
Query: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
Query: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
Query: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
Query: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
Query: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI
Sbjct: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
Query: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
Query: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
Query: 961 DFDLQEVL 968
DFDLQE L
Sbjct: 961 DFDLQENL 968
BLAST of IVF0006141 vs. NCBI nr
Match:
XP_004144791.2 (DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Cucumis sativus] >KGN61063.1 hypothetical protein Csa_021248 [Cucumis sativus])
HSP 1 Score: 1873 bits (4852), Expect = 0.0
Identity = 934/975 (95.79%), Postives = 955/975 (97.95%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQ 60
MT TASFFPTLQAPIHGSNAWKKPTKRWKCERKT TSFTSTFNS LSSVSFP+NFDSTSQ
Sbjct: 1 MTATASFFPTLQAPIHGSNAWKKPTKRWKCERKTHTSFTSTFNSPLSSVSFPVNFDSTSQ 60
Query: 61 PFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLFLKGL 120
HLQPLADSVHENFTETLDNSMNLQIP SEIHQITRGES +RIFIQDPPWIASLFLKGL
Sbjct: 61 SLHLQPLADSVHENFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGL 120
Query: 121 YKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPY 180
YKCVQKEVKLEFM+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELEREMCEKKLAPNLPY
Sbjct: 121 YKCVQKEVKLEFMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPY 180
Query: 181 VKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQ 240
VK LFLGWFEPLK AIE+EQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLLM+A
Sbjct: 181 VKKLFLGWFEPLKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAA 240
Query: 241 QDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGL 300
QD CVQVVQAAVQIGGAIEQEVRIQS LEKARSNQRTKV ADTECL+KEKEVLRK+VNGL
Sbjct: 241 QDGCVQVVQAAVQIGGAIEQEVRIQSILEKARSNQRTKVRADTECLTKEKEVLRKQVNGL 300
Query: 301 IRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPA 360
IRRR+LKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD+RPA
Sbjct: 301 IRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDIRPA 360
Query: 361 FWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKG 420
FWHGFKPVAKTPGQNFVKKYGV+ECDPIVLAGLD+TAKHMLIPYIPMLVPPKKWKGYDKG
Sbjct: 361 FWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKKWKGYDKG 420
Query: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWA 480
GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNR VLSVVESLWA
Sbjct: 421 GHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLSVVESLWA 480
Query: 481 QGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
QGGNTAGLVDRKDVPIPEK LGDLTE QEWRWSMKKAKKINQELHSQRCDVELKLSVARK
Sbjct: 481 QGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 540
Query: 541 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN
Sbjct: 541 MKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 600
Query: 601 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
L+AGGVEKLSYD RLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK
Sbjct: 601 LYAGGVEKLSYDERLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 660
Query: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI
Sbjct: 661 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 720
Query: 721 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 780
MIRDA+KDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTY+GAREQIK+RLEEKGLI
Sbjct: 721 MIRDASKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLEEKGLI 780
Query: 781 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
SDDRL FRASCYAAKVTL+ALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV
Sbjct: 781 SDDRLRFRASCYAAKVTLSALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 840
Query: 841 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
QPYYKSERHLIRTSLQVLAL+REGN VDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG
Sbjct: 841 QPYYKSERHLIRTSLQVLALQREGNLVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 900
Query: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 960
LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLP RG
Sbjct: 901 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPGRG 960
Query: 961 DFDLQEVLRSPYFFN 975
DFDLQEVL+SPYFFN
Sbjct: 961 DFDLQEVLKSPYFFN 975
BLAST of IVF0006141 vs. NCBI nr
Match:
XP_038889744.1 (DNA-directed RNA polymerase 3, chloroplastic [Benincasa hispida])
HSP 1 Score: 1840 bits (4765), Expect = 0.0
Identity = 920/979 (93.97%), Postives = 950/979 (97.04%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNS----SLSSVSFPINFD 60
MTT ASFFPTLQAPIHG NAWKKPTKR KCERKT SF STFNS LSSVSFPINFD
Sbjct: 1 MTTAASFFPTLQAPIHGGNAWKKPTKRCKCERKTHLSFISTFNSLSNSPLSSVSFPINFD 60
Query: 61 STSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLF 120
STS+P LQPLADSV ENFTETLD SMNLQIP SE+ QITRGES QRIFIQDPPWIASLF
Sbjct: 61 STSEPVQLQPLADSVQENFTETLDGSMNLQIPMSEVRQITRGESSQRIFIQDPPWIASLF 120
Query: 121 LKGLYKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAP 180
LKGLYK VQKEVKLE+M+IEKRKYNLLRRRQIKAETEAWEKMV+EYKELEREMCEKKLAP
Sbjct: 121 LKGLYKSVQKEVKLEYMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAP 180
Query: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLL 240
NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLL
Sbjct: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240
Query: 241 MVAQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKR 300
MVAQQD CVQVVQAAVQIGGAIEQEVRIQSFL+KARSNQRTKVPADTECLSKEKEVLRKR
Sbjct: 241 MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLDKARSNQRTKVPADTECLSKEKEVLRKR 300
Query: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD
Sbjct: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
Query: 361 VRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKG 420
+RPAFWH FKPVAKTPGQN VK YGVIECDPIVLAGLD+TAKHMLIPYIPMLVPP+KWKG
Sbjct: 361 IRPAFWHRFKPVAKTPGQNIVKNYGVIECDPIVLAGLDRTAKHMLIPYIPMLVPPRKWKG 420
Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE
Sbjct: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
Query: 481 SLWAQGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLS 540
S+WAQGGNTAGLVDRKDVPIPEK LGDLT+ QEW+WSM+KAKKINQELHSQRCDVELKLS
Sbjct: 481 SIWAQGGNTAGLVDRKDVPIPEKPLGDLTDMQEWKWSMRKAKKINQELHSQRCDVELKLS 540
Query: 541 VARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
VAR+MKDEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGL WLKI
Sbjct: 541 VARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKI 600
Query: 601 HLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 660
HLANL+AGGVEKLSYDRR+AFVDDHLD+IFDSASNPVNGDRWWLTAEDPFQCLAAC+NLS
Sbjct: 601 HLANLYAGGVEKLSYDRRVAFVDDHLDSIFDSASNPVNGDRWWLTAEDPFQCLAACINLS 660
Query: 661 EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720
EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR
Sbjct: 661 EALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720
Query: 721 VHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 780
VHTIMIRD NKDPTTNPNA LAK+LIDQVDRKLVKQTVMTSVYGVTYVGAREQIK+RLEE
Sbjct: 721 VHTIMIRDGNKDPTTNPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEE 780
Query: 781 KGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 840
KG+ISDDRLLFRA+CYAAKVTLAALGEIFEAARGIMGWLGDCAKVIA DNQPVRWTTPLG
Sbjct: 781 KGVISDDRLLFRAACYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAADNQPVRWTTPLG 840
Query: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 900
LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTA+AC
Sbjct: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTAVAC 900
Query: 901 RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 960
RDAGLRFAGVHDSFWTHACDVD+MNLILREKFVELY+MPVLESLLEGFETTYPGLTFPSL
Sbjct: 901 RDAGLRFAGVHDSFWTHACDVDQMNLILREKFVELYNMPVLESLLEGFETTYPGLTFPSL 960
Query: 961 PERGDFDLQEVLRSPYFFN 975
PERGDFDLQEVL+SPYFFN
Sbjct: 961 PERGDFDLQEVLKSPYFFN 979
BLAST of IVF0006141 vs. NCBI nr
Match:
XP_022158151.1 (DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Momordica charantia])
HSP 1 Score: 1781 bits (4612), Expect = 0.0
Identity = 892/979 (91.11%), Postives = 930/979 (94.99%), Query Frame = 0
Query: 1 MTTTASFFPTLQAPIHGSNAWKKPTKRWKCERKTQTSFTSTFNS----SLSSVSFPINFD 60
MT+TASFFPTLQAPI+G NAW+KPTKR CER+T SFTSTFNS LSSVSFP N D
Sbjct: 1 MTSTASFFPTLQAPIYGGNAWRKPTKRCNCERRTHLSFTSTFNSLSNSPLSSVSFPTNSD 60
Query: 61 STSQPFHLQPLADSVHENFTETLDNSMNLQIPTSEIHQITRGESGQRIFIQDPPWIASLF 120
ST++P LQPLADSV ENFTETLDNSMNLQ+PT E S QRIFIQDPPWIASLF
Sbjct: 61 STAEPVRLQPLADSVQENFTETLDNSMNLQVPTRE--------SCQRIFIQDPPWIASLF 120
Query: 121 LKGLYKCVQKEVKLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAP 180
LKGLYK VQKEVKLEF +IEKRKYNLLRRRQIKAETEAWE+MV+EYKELEREMCEKKLAP
Sbjct: 121 LKGLYKSVQKEVKLEFKEIEKRKYNLLRRRQIKAETEAWERMVEEYKELEREMCEKKLAP 180
Query: 181 NLPYVKTLFLGWFEPLKQAIEKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLL 240
NLPYVKTLFLGWFEPLKQAIEKEQ TQRSKKQKAAFAPHIELLSADK+AVIVMYKMMGLL
Sbjct: 181 NLPYVKTLFLGWFEPLKQAIEKEQNTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLL 240
Query: 241 MVAQQDCCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKR 300
MVAQQD CVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTK+PAD +CLSKEKE+LRKR
Sbjct: 241 MVAQQDGCVQVVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKIPADAQCLSKEKEILRKR 300
Query: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPD 360
VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSAD PPD
Sbjct: 301 VNGLIRRRRLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADCPPD 360
Query: 361 VRPAFWHGFKPVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKG 420
+RPAFWH FKPV KTPGQ VK YGVIECDPIVLAGLD+TAKH+LIPYIPMLVPPKKWKG
Sbjct: 361 IRPAFWHRFKPVTKTPGQKIVKTYGVIECDPIVLAGLDRTAKHVLIPYIPMLVPPKKWKG 420
Query: 421 YDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
YDKGGH FLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE
Sbjct: 421 YDKGGHLFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVE 480
Query: 481 SLWAQGGNTAGLVDRKDVPIPEKQLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLS 540
S+WAQGGNTAGLVDRKDVPIPE+ LGDLTE QEW+WS++KAKKINQELHSQRCDVELKLS
Sbjct: 481 SIWAQGGNTAGLVDRKDVPIPEQPLGDLTEMQEWKWSVRKAKKINQELHSQRCDVELKLS 540
Query: 541 VARKMKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
VARKM+DEEGFYYPHN+DFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI
Sbjct: 541 VARKMRDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKI 600
Query: 601 HLANLHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLS 660
HLANL+AGGVEKLSYDRRLAFVDDHLD+IFDSASNPVNG+RWWLTAEDPFQCLAAC+NLS
Sbjct: 601 HLANLYAGGVEKLSYDRRLAFVDDHLDSIFDSASNPVNGNRWWLTAEDPFQCLAACINLS 660
Query: 661 EALKSSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAAR 720
EALKSS+PHTVIS+LPIHQDGSCNGLQHYAALGRDT EAAAVNLVAGEKPADVY+EIAAR
Sbjct: 661 EALKSSSPHTVISHLPIHQDGSCNGLQHYAALGRDTFEAAAVNLVAGEKPADVYTEIAAR 720
Query: 721 VHTIMIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 780
VH IMIRD NKDP TNPNA LAK+LIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE
Sbjct: 721 VHNIMIRDGNKDPATNPNALLAKILIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEE 780
Query: 781 KGLISDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLG 840
KGLISDDRLLFRA+CYAAKVTLAALGEIFEAARGIM WLGDCAKVIA DNQPVRWTTPLG
Sbjct: 781 KGLISDDRLLFRAACYAAKVTLAALGEIFEAARGIMSWLGDCAKVIAADNQPVRWTTPLG 840
Query: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALAC 900
LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRK RTAFPPNFVHSLDGSHMMLTALAC
Sbjct: 841 LPVVQPYYKSERHLIRTSLQVLALRREGNSVDVRKHRTAFPPNFVHSLDGSHMMLTALAC 900
Query: 901 RDAGLRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSL 960
RDAGLRFAGVHDSFWTHACDVD+MN+ILRE FVELY+MPVLESLLEGFETTYPGLTFPSL
Sbjct: 901 RDAGLRFAGVHDSFWTHACDVDQMNVILRETFVELYNMPVLESLLEGFETTYPGLTFPSL 960
Query: 961 PERGDFDLQEVLRSPYFFN 975
P+RGDFDL+EVL SPYFFN
Sbjct: 961 PDRGDFDLREVLNSPYFFN 971
BLAST of IVF0006141 vs. TAIR 10
Match:
AT2G24120.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1344.3 bits (3478), Expect = 0.0e+00
Identity = 670/970 (69.07%), Postives = 799/970 (82.37%), Query Frame = 0
Query: 21 WKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQPFHLQPLADSV--HENFTET 80
W KP R+ F + +S+ S + STS H +P+++SV H N E+
Sbjct: 28 WLKPPPSSALFRRKTLPFFERHSLPISASSSSSSSSSTSLSVHEKPISNSVHFHGNLIES 87
Query: 81 LDNSMNLQIPT----SEIHQI-----TRGESG-QRIFIQDPPWIASLFLKGLYKCVQKEV 140
+N + T S I ++ G SG +R+F+QDPPWI++LFLKGL K V + +
Sbjct: 88 FENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTL 147
Query: 141 KLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGW 200
K+E I+KRK++ LRRRQ+K ETEAWE+MV EY++LE+EMCEK LAPNLPYVK +FLGW
Sbjct: 148 KIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGW 207
Query: 201 FEPLKQAIEKEQKTQ--RSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQQDCCVQ 260
F+PLK IE+EQK Q +SKK +AA+APHIELL ADK+AVIVM+KMMGL+M +D C+Q
Sbjct: 208 FQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQ 267
Query: 261 VVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGLIRRRRL 320
VVQAAV IG AIEQEVRI +FL++ R N D++ KEK++LRKRVN LIRR+R+
Sbjct: 268 VVQAAVSIGIAIEQEVRIHNFLKRTRKNN----AGDSQEELKEKQLLRKRVNSLIRRKRI 327
Query: 321 KEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFK 380
+ K++K E K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF H FK
Sbjct: 328 IDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 387
Query: 381 PVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLP 440
V K PG V++YGVIECD ++LAGLD++AKHMLIPY+PMLVPPK+WKGYDKGG+ FLP
Sbjct: 388 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 447
Query: 441 SYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQGGNTA 500
SY+MRTHGS +QQDA+K+IS K +VFEALD LG+TKWRVNR +L VVE LWA GGN A
Sbjct: 448 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 507
Query: 501 GLVDRKDVPIPEKQLG-DLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEE 560
GLV+R+DVPIPEK D E Q W+WS +KA KIN+E HS RCDVELKLSVARKMKDEE
Sbjct: 508 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 567
Query: 561 GFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLHAGG 620
GFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG LEFAEGRPLGKSGLHWLKIHLANL+AGG
Sbjct: 568 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 627
Query: 621 VEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPH 680
VEKLS+D RLAFV++HLD+I DSA NP++G RWWL AEDPFQCLAAC+ L++ALKS +P+
Sbjct: 628 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 687
Query: 681 TVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDA 740
+VIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAGEKPADVYSEI+ RVH IM +D+
Sbjct: 688 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 747
Query: 741 NKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLISDDRL 800
+KDP +NP A+LAK+LI QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLEEKG+I+D+R+
Sbjct: 748 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 807
Query: 801 LFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYK 860
LF A+CY+AKVTLAALGEIFEAAR IM WLGDCAK+IA DN PVRW TPLGLPVVQPY +
Sbjct: 808 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 867
Query: 861 SERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAG 920
SERHLIRTSLQVLAL+REGN+VDVRKQRTAFPPNFVHSLDG+HMM+TA+ACR+AGL FAG
Sbjct: 868 SERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNFAG 927
Query: 921 VHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERGDFDLQ 976
VHDS+WTHACDVD MN ILREKFVELY+ P+LE LL+ F+ +YP L FP +P+RGDFDL+
Sbjct: 928 VHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQESYPNLVFPPVPKRGDFDLK 987
BLAST of IVF0006141 vs. TAIR 10
Match:
AT2G24120.2 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 587/862 (68.10%), Postives = 702/862 (81.44%), Query Frame = 0
Query: 21 WKKPTKRWKCERKTQTSFTSTFNSSLSSVSFPINFDSTSQPFHLQPLADSV--HENFTET 80
W KP R+ F + +S+ S + STS H +P+++SV H N E+
Sbjct: 28 WLKPPPSSALFRRKTLPFFERHSLPISASSSSSSSSSTSLSVHEKPISNSVHFHGNLIES 87
Query: 81 LDNSMNLQIPT----SEIHQI-----TRGESG-QRIFIQDPPWIASLFLKGLYKCVQKEV 140
+N + T S I ++ G SG +R+F+QDPPWI++LFLKGL K V + +
Sbjct: 88 FENQDSSYAGTIKGASLIEELENPVERNGLSGRRRLFMQDPPWISALFLKGLSKMVDQTL 147
Query: 141 KLEFMKIEKRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGW 200
K+E I+KRK++ LRRRQ+K ETEAWE+MV EY++LE+EMCEK LAPNLPYVK +FLGW
Sbjct: 148 KIERKDIDKRKFDSLRRRQVKEETEAWERMVDEYRDLEKEMCEKNLAPNLPYVKHMFLGW 207
Query: 201 FEPLKQAIEKEQKTQ--RSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQQDCCVQ 260
F+PLK IE+EQK Q +SKK +AA+APHIELL ADK+AVIVM+KMMGL+M +D C+Q
Sbjct: 208 FQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMSGHEDGCIQ 267
Query: 261 VVQAAVQIGGAIEQEVRIQSFLEKARSNQRTKVPADTECLSKEKEVLRKRVNGLIRRRRL 320
VVQAAV IG AIEQEVRI +FL++ R N D++ KEK++LRKRVN LIRR+R+
Sbjct: 268 VVQAAVSIGIAIEQEVRIHNFLKRTRKNN----AGDSQEELKEKQLLRKRVNSLIRRKRI 327
Query: 321 KEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFK 380
+ K++K E K WGR TQAKLGSRL+ELLIE+A++QPP++QS DS P+ RPAF H FK
Sbjct: 328 IDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHRFK 387
Query: 381 PVAKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLP 440
V K PG V++YGVIECD ++LAGLD++AKHMLIPY+PMLVPPK+WKGYDKGG+ FLP
Sbjct: 388 TVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLFLP 447
Query: 441 SYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQGGNTA 500
SY+MRTHGS +QQDA+K+IS K +VFEALD LG+TKWRVNR +L VVE LWA GGN A
Sbjct: 448 SYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGNIA 507
Query: 501 GLVDRKDVPIPEKQLG-DLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEE 560
GLV+R+DVPIPEK D E Q W+WS +KA KIN+E HS RCDVELKLSVARKMKDEE
Sbjct: 508 GLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKDEE 567
Query: 561 GFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLHAGG 620
GFYYPHN+DFRGRAYPMHPHLNHLSSDLCRG LEFAEGRPLGKSGLHWLKIHLANL+AGG
Sbjct: 568 GFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGG 627
Query: 621 VEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPH 680
VEKLS+D RLAFV++HLD+I DSA NP++G RWWL AEDPFQCLAAC+ L++ALKS +P+
Sbjct: 628 VEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSPY 687
Query: 681 TVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDA 740
+VIS+LPIHQDGSCNGLQHYAALGRD+ EAAAVNLVAGEKPADVYSEI+ RVH IM +D+
Sbjct: 688 SVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDS 747
Query: 741 NKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLISDDRL 800
+KDP +NP A+LAK+LI QVDRKLVKQTVMTSVYGVTYVGAREQIK+RLEEKG+I+D+R+
Sbjct: 748 SKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDERM 807
Query: 801 LFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYK 860
LF A+CY+AKVTLAALGEIFEAAR IM WLGDCAK+IA DN PVRW TPLGLPVVQPY +
Sbjct: 808 LFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPYCR 867
Query: 861 SERHLIRTSLQVLALRREGNSV 868
SERHLIRTSLQVLAL+REGN+V
Sbjct: 868 SERHLIRTSLQVLALQREGNTV 885
BLAST of IVF0006141 vs. TAIR 10
Match:
AT1G68990.1 (male gametophyte defective 3 )
HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 535/848 (63.09%), Postives = 667/848 (78.66%), Query Frame = 0
Query: 138 RKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIE 197
+K+ +L++RQ+K ETE WE+ +E +E+ +MCE+KLAPNLPY+K+LFLGWFEP++ AI+
Sbjct: 130 QKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQ 189
Query: 198 KEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMV-AQQDCCVQVVQAAVQIGG 257
+ T + KK K +AP +E L ADK+AVI M+KMMGLLM A+ V++V AA QIG
Sbjct: 190 DDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGE 249
Query: 258 AIEQEVRIQSFLEKARSNQRTKVPADTEC-------LSKEKEVLRKRVNGLIRRRRLKEV 317
A+EQEVRI SFL+K T +TE ++KE E RK+V L+ + +L++V
Sbjct: 250 AVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQV 309
Query: 318 QKLLKK-EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFKPV 377
+ L++K + FK WG++ Q K+G+RLI+LL+E+A+IQPP Q D PPD+RPAF F+ V
Sbjct: 310 KALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTV 369
Query: 378 AKTPGQNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSY 437
++YG IECDP+VL GLD++A+HM+IPY+PML+PP+ W GYD+G HFFLPSY
Sbjct: 370 T-LENTKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSY 429
Query: 438 VMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQGGNTAGL 497
VMRTHG+ +Q+ MK +Q++ V+EALD LG+TKW++N++VLS+V+ +WA GG GL
Sbjct: 430 VMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGL 489
Query: 498 VDRKDVPIPEK-QLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGF 557
VDR+DVPIPE+ + D + + WRW KKA K N E HSQRCD+ELKL VARKMKDEEGF
Sbjct: 490 VDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGF 549
Query: 558 YYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLHAGGVE 617
YYPHNVDFRGRAYP+HP+LNHL SDLCRG+LEF EG+PLGKSGL WLKIH+ANL+AGGV+
Sbjct: 550 YYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVD 609
Query: 618 KLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTV 677
KL+Y+ R+AF + HL++IFDS+ P+ G RWWL AEDPFQCLAAC+NLSEAL+S P
Sbjct: 610 KLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAA 669
Query: 678 ISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDANK 737
IS++PIHQDGSCNGLQHYAALGRD L A AVNLV GEKPADVY+EIAARV IM +DA +
Sbjct: 670 ISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEE 729
Query: 738 DPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLISDDRLLF 797
DP T PNA+ AKL++DQVDRKLVKQTVMTSVYGVTY GAR+QIKKRL+E+G DD L F
Sbjct: 730 DPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTF 789
Query: 798 RASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSE 857
ASCYAAK+TL AL E+FEAAR I W GDCAK+IA +N V WTTPLGLPVVQPY K
Sbjct: 790 HASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPG 849
Query: 858 RHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVH 917
RHL++T+LQVL L RE + V R+Q TAF PNF+HSLDGSHMM+TA+AC AGL FAGVH
Sbjct: 850 RHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVH 909
Query: 918 DSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERGDFDLQEV 976
DSFWTHACDVD MN ILREKFVELY P+LE+LLE F+ ++P ++FP LPERGDFDL++V
Sbjct: 910 DSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERGDFDLRKV 969
BLAST of IVF0006141 vs. TAIR 10
Match:
AT1G68990.2 (male gametophyte defective 3 )
HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 535/855 (62.57%), Postives = 667/855 (78.01%), Query Frame = 0
Query: 138 RKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAIE 197
+K+ +L++RQ+K ETE WE+ +E +E+ +MCE+KLAPNLPY+K+LFLGWFEP++ AI+
Sbjct: 130 QKFYMLKQRQVKMETEEWERAARECREILADMCEQKLAPNLPYMKSLFLGWFEPVRNAIQ 189
Query: 198 KEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMV-AQQDCCVQVVQAAVQIGG 257
+ T + KK K +AP +E L ADK+AVI M+KMMGLLM A+ V++V AA QIG
Sbjct: 190 DDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNAEGVGIVKLVNAATQIGE 249
Query: 258 AIEQEVRIQSFLEKARSNQRTKVPADTEC-------LSKEKEVLRKRVNGLIRRRRLKEV 317
A+EQEVRI SFL+K T +TE ++KE E RK+V L+ + +L++V
Sbjct: 250 AVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQV 309
Query: 318 QKLLKK-EEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFKPV 377
+ L++K + FK WG++ Q K+G+RLI+LL+E+A+IQPP Q D PPD+RPAF F+ V
Sbjct: 310 KALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTV 369
Query: 378 AKTPGQNFVKKYGVIECDPIVLAGLDQT-------AKHMLIPYIPMLVPPKKWKGYDKGG 437
++YG IECDP+VL GLD++ A+HM+IPY+PML+PP+ W GYD+G
Sbjct: 370 T-LENTKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGA 429
Query: 438 HFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQ 497
HFFLPSYVMRTHG+ +Q+ MK +Q++ V+EALD LG+TKW++N++VLS+V+ +WA
Sbjct: 430 HFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWAN 489
Query: 498 GGNTAGLVDRKDVPIPEK-QLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARK 557
GG GLVDR+DVPIPE+ + D + + WRW KKA K N E HSQRCD+ELKL VARK
Sbjct: 490 GGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARK 549
Query: 558 MKDEEGFYYPHNVDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLAN 617
MKDEEGFYYPHNVDFRGRAYP+HP+LNHL SDLCRG+LEF EG+PLGKSGL WLKIH+AN
Sbjct: 550 MKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIAN 609
Query: 618 LHAGGVEKLSYDRRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALK 677
L+AGGV+KL+Y+ R+AF + HL++IFDS+ P+ G RWWL AEDPFQCLAAC+NLSEAL+
Sbjct: 610 LYAGGVDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALR 669
Query: 678 SSAPHTVISYLPIHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTI 737
S P IS++PIHQDGSCNGLQHYAALGRD L A AVNLV GEKPADVY+EIAARV I
Sbjct: 670 SPFPEAAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKI 729
Query: 738 MIRDANKDPTTNPNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLI 797
M +DA +DP T PNA+ AKL++DQVDRKLVKQTVMTSVYGVTY GAR+QIKKRL+E+G
Sbjct: 730 MQQDAEEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTF 789
Query: 798 SDDRLLFRASCYAAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVV 857
DD L F ASCYAAK+TL AL E+FEAAR I W GDCAK+IA +N V WTTPLGLPVV
Sbjct: 790 EDDSLTFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVV 849
Query: 858 QPYYKSERHLIRTSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAG 917
QPY K RHL++T+LQVL L RE + V R+Q TAF PNF+HSLDGSHMM+TA+AC AG
Sbjct: 850 QPYRKPGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAG 909
Query: 918 LRFAGVHDSFWTHACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERG 976
L FAGVHDSFWTHACDVD MN ILREKFVELY P+LE+LLE F+ ++P ++FP LPERG
Sbjct: 910 LSFAGVHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQKSFPDISFPPLPERG 969
BLAST of IVF0006141 vs. TAIR 10
Match:
AT5G15700.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 533/843 (63.23%), Postives = 668/843 (79.24%), Query Frame = 0
Query: 137 KRKYNLLRRRQIKAETEAWEKMVKEYKELEREMCEKKLAPNLPYVKTLFLGWFEPLKQAI 196
+ K+ L RRQ+K ETE WE+ EY EL +MCE+KLAPNLPYVK+LFLGWFEPL+ AI
Sbjct: 171 RTKFQNLWRRQVKIETEEWERAAAEYMELLTDMCEQKLAPNLPYVKSLFLGWFEPLRDAI 230
Query: 197 EKEQKTQRSKKQKAAFAPHIELLSADKLAVIVMYKMMGLLMVAQQDCCVQVVQAAVQIGG 256
K+Q+ R K KA +A +++ L ADK++VI M+K+MG LM + CV+VV AA +G
Sbjct: 231 AKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGGDNGCVKVVHAACTVGD 290
Query: 257 AIEQEVRIQSFLEKARSNQRTKVP--ADTECLSKEKEVLRKRVNGLIRRRRLKEVQKLLK 316
AIEQE+RI +FL+K + + + E KE++ LRK+VN LI++++L V+K+L+
Sbjct: 291 AIEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKVNELIKKQKLSAVRKILQ 350
Query: 317 KEEF-KAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDVRPAFWHGFKPVAKTPG 376
++ K W D +AK+GSRLIELL+ +A+IQ P Q + PDVRPAF H FK VAK
Sbjct: 351 SHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPDVRPAFVHTFK-VAK-GS 410
Query: 377 QNFVKKYGVIECDPIVLAGLDQTAKHMLIPYIPMLVPPKKWKGYDKGGHFFLPSYVMRTH 436
N +KYGVIECDP+V GL+++ ++ ++PY+PMLVPP KW GYDKG + FL SY+M+TH
Sbjct: 411 MNSGRKYGVIECDPLVRKGLEKSGRYAVMPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTH 470
Query: 437 GSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRRVLSVVESLWAQGGNTAGLVDRKD 496
G+ +Q++A+K+ Q+Q VFEALD LGSTKWRVN+RVL+VV+ +W+ GG A +VDR D
Sbjct: 471 GAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCVADMVDRSD 530
Query: 497 VPIPEK-QLGDLTETQEWRWSMKKAKKINQELHSQRCDVELKLSVARKMKDEEGFYYPHN 556
VP+PEK D ++W+W +K AKK+N E HSQRCD ELKLSVARKMKDEE FYYPHN
Sbjct: 531 VPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQRCDTELKLSVARKMKDEEAFYYPHN 590
Query: 557 VDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLHWLKIHLANLHAGGVEKLSYD 616
+DFRGRAYPM PHLNHL SDLCRGVLEFAEGRP+G SGL WLKIHLANL+AGGV+KLS D
Sbjct: 591 MDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMGISGLRWLKIHLANLYAGGVDKLSLD 650
Query: 617 RRLAFVDDHLDNIFDSASNPVNGDRWWLTAEDPFQCLAACMNLSEALKSSAPHTVISYLP 676
RLAF ++HLD+IFDSA P+ G RWWL AEDPFQCLA C++L+EAL+S +P TV+S++P
Sbjct: 651 GRLAFTENHLDDIFDSADRPLEGSRWWLQAEDPFQCLAVCISLTEALRSPSPETVLSHIP 710
Query: 677 IHQDGSCNGLQHYAALGRDTLEAAAVNLVAGEKPADVYSEIAARVHTIMIRDANKDPTTN 736
IHQDGSCNGLQHYAALGRDTL A AVNLVAGEKPADVYS IA RV IM RDA++DP
Sbjct: 711 IHQDGSCNGLQHYAALGRDTLGAEAVNLVAGEKPADVYSGIATRVLDIMRRDADRDPEVF 770
Query: 737 PNASLAKLLIDQVDRKLVKQTVMTSVYGVTYVGAREQIKKRLEEKGLISDDRLLFRASCY 796
P A A+ L++QVDRKLVKQTVMTSVYGVTY+GAR+QIK+RL+E+ D++ +F A+CY
Sbjct: 771 PEALRARKLLNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERSDFGDEKEVFGAACY 830
Query: 797 AAKVTLAALGEIFEAARGIMGWLGDCAKVIAKDNQPVRWTTPLGLPVVQPYYKSERHLIR 856
AAKVTLAA+ E+F+AAR IM W G+CAK+IA +N+ VRWTTPLGLPVVQPY++ L++
Sbjct: 831 AAKVTLAAIDEMFQAARAIMRWFGECAKIIASENETVRWTTPLGLPVVQPYHQMGTKLVK 890
Query: 857 TSLQVLALRREGNSVDVRKQRTAFPPNFVHSLDGSHMMLTALACRDAGLRFAGVHDSFWT 916
TSLQ L+L+ E + V VR+QRTAFPPNF+HSLDGSHMM+TA+AC+ AG+ FAGVHDSFWT
Sbjct: 891 TSLQTLSLQHETDQVIVRRQRTAFPPNFIHSLDGSHMMMTAVACKRAGVCFAGVHDSFWT 950
Query: 917 HACDVDRMNLILREKFVELYSMPVLESLLEGFETTYPGLTFPSLPERGDFDLQEVLRSPY 976
HACDVD++N+ILREKFVELYS P+LE+LLE FE ++P L FP LPERGD DL+ VL SPY
Sbjct: 951 HACDVDKLNIILREKFVELYSQPILENLLESFEQSFPHLDFPPLPERGDLDLKVVLDSPY 1010
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P69243 | 0.0e+00 | 69.05 | DNA-directed RNA polymerase 3A, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RP... | [more] |
P69242 | 0.0e+00 | 69.05 | DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=... | [more] |
Q8L6J1 | 0.0e+00 | 69.25 | DNA-directed RNA polymerase 3B, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RP... | [more] |
O24600 | 0.0e+00 | 69.07 | DNA-directed RNA polymerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... | [more] |
Q8L6J3 | 0.0e+00 | 66.03 | DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BU26 | 0.0e+00 | 99.59 | DNA-directed RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493541 PE=3 SV=1 | [more] |
A0A5D3BDV2 | 0.0e+00 | 99.90 | DNA-directed RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A0A0LH38 | 0.0e+00 | 95.79 | DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G036610 PE=3 SV=1 | [more] |
A0A6J1E061 | 0.0e+00 | 91.11 | DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111024704 PE=3 ... | [more] |
A0A6J1I1C4 | 0.0e+00 | 89.29 | DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111468549 PE=3 SV=... | [more] |
Match Name | E-value | Identity | Description | |
XP_008452554.1 | 0.0 | 99.59 | PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Cucumis melo] | [more] |
KAA0056119.1 | 0.0 | 99.90 | DNA-directed RNA polymerase 3 [Cucumis melo var. makuwa] >TYJ96398.1 DNA-directe... | [more] |
XP_004144791.2 | 0.0 | 95.79 | DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Cucumis sativus] >KGN61... | [more] |
XP_038889744.1 | 0.0 | 93.97 | DNA-directed RNA polymerase 3, chloroplastic [Benincasa hispida] | [more] |
XP_022158151.1 | 0.0 | 91.11 | DNA-directed RNA polymerase 3, chloroplastic isoform X1 [Momordica charantia] | [more] |