IVF0006135 (gene) Melon (IVF77) v1

Overview


Name	IVF0006135
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gibberellin-regulated family protein
Location	chr03: 720587 .. 724651 (-)
RNA-Seq Expression	IVF0006135
Synteny	IVF0006135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATCAACATTTCCATTACAACCTTAAAGTGTCTATTTATAGTCTTAAAAGAAAAGAACACAATTAGCTAATCACTAATTAATCTAAATTAACAACTAAAGTATTACACATTAAATTTATACAAGTTCATCCCTTTTTTTCTCTACTATTTTTTCTTTTTTAGTTTAAATTGATTCTCATTCCTCTAATTATTTTGTTCTTTTAAATTAGAAAAAAAAATTATATAAACTACCACTGAAAATAATATTTATGTGGCCATTGTTACATGTTTGGAAGTGATTTTGAAATTGTTAAAACAATTTGTGATGTCTTTAATTGCTTTAAAATTAATTTAAAAATTAACAGATTTTAGATGCAAATTTCAAATCTATCGAAATTGGTTTGAAATGATTAAAAGCAACTTTTAAGTGATTTTAAAAAAAGGATATACTGAAAATCATAAAAATATTCAAAATTTTACTTTATTGCCCAAATTGGTCCATTGAAATATACAAGATTGTATGATATGGCCCTTCTGCTGCTGATGGAATTCCTTCCTTTTTCATTCTTGTAAGTTCGAAAAAACTTTTGGCATAGAATGAAGATGCCAACTTTTACGAAGTTATTATAACCAAATCGAGTTTCATACTATAATAACTAACATAATCTTCTTTTTAAGAAGTTAAATTCATTGAATGTTTGATCTCTTAATTCGCAGTCGAAAAATAAAAAGAAACTTTTATAGATGGATAAAAAATTTATTAATGAATTTAACTCAAGGCCGAATGACCTATATTTTTACCTTTTGGCAAAGTTCGATTTTAGGATTTTTAATCGACGAATGCCATTTTCCAATCTTGTAATTTTAAGAATTTAATTGTAATTGCTTTTCAACTTATTCTTAAACAATCCAATGAAAATGAACTTCAGAGTAAGAAAATACGAGAAATTGATCAAACCAACTATAATCTTAGTTAATAAAATAAAATAAAATCAACAAACTTATATGGTGAAAAAAACACGGGAAAAATAATCCTTTTTGGTCTTTAGATTTTCGAGTTTGTTTTTTTCTTGGTTCCAGGGTTTTAAAATCTTATACCTCTATGTTTTGAATTTGATTACGACGTAACGAAGATATACATATATGTGTGTAGAAGGCTCGCGTAATTGATAATGTTGGAGTGTTTTTGTGGTAGGAGAATGACCCAACCTAAGTGTATGGGTGTATGTCTTTTTGCTTTATATATGTTGGCCTTTTGGATTCATGCAAAGAATCACTAAACACAGCTGTTTATTCTCATCTCTGTAAAGCCAAAACAAATTATAAAGATACCGACATCAATCGCTTGATTACTATTGAATTACAAAACTTGTAGGATCAAAAGATCGGAATCTACAACAAATACTTTATGCCAATCGAACTAAATTTATATTATTGACACATTTATTATCCAAACTAACACACCTAATTCATCATTAACAACATGATATGAGAACACCATCTTTCAAATCAAACTAAATTTTGTCTGATTTGAAATTGCTAGGTTTTGGAAATACTAGAGGTTCTCAATTGTCCTCGTCTTCAAGTTAAGTGAGAAGGTTCAAATAAGCAAATACTTGATTTCTAATCATTGCAATTTGAAGCACTTTTAAGTTGGTTATAATTAGGGTTGTAGGGAGAGATTTTGTGTGCATTGTAAGAATTTTTTTTTTACTCATGTATAGCTTTCCTCAGGTTTGGAGTTTCTTTACTATTTTTCTACTTATTTCTACCGTATGTAGTGGTAGAAGGATGAAGACGAGCTTAGAGTTTTTGTGAGAGAGGTGTTTCTTTTGAACCACTCCACCTTGTAAACAAGCCTTTGAATTGTATGCATGAGAATGTGGAAAAGTGATACGATTGGCATAAAGTTAAAAGGAACAAAACTTTGCTTGGATGACCTTTTTTTTCTCTCTTCCTTTTTAACACTTAATGGCAGGAAGAAGACAATAAAAAAAAAAAAAAAACAAATAATATATGTAAATTAGAGGACAAATATGTAATTTTACTCGTTTTTGTCTTAAGATGGAAAAAGAAAAACCCATATACATTGGAGAGGCATTGCACCTATATATATCCCACCATCTTCGCCACCTGAGTTCATCAATCAAATTATCTTTTCAGACATATCCTTTTAGAGAAATGAAGCCACTCAGTCTTCTTTGCATTTTCATTATTCTTTCCTTTCTCCTGCAGGTAATATTTCTATTTTTATGTATATATATTTTTTACATGTTTACATTTTTATTTAACAAATTTCATTTAATGAATTTAATTCTTTTATGCATTTTGTTGTAGGGTTTTTCAGAGGCTATCACTACTGTGAGTGTTCACCATCCATATTATATATCTCTTGCTTTACTTTTTACCTTTCCATCATTACCTTTTCTATGTTTTGCAATCCATTGAATTGAAATTTTGAGATTATTGTTAAGGCTTATTATATCTAATAATTGTTGGGAACAACCACCACTTAACAACTCCAACTTGTTATTCTAATCTCTTAAAAGTTAGTGGAGTGGACTACCTCACTCCATGTTCGAGGCTCTAATTAAGTTGTCGTTTTAAACTATATATCATATTTTACAATTGACTATAACATCAGTATTTTGAAACCCTATTTGCTACATTACTAACTATTTTTTACGGTATTTACTATATTTACCCAGACTAAAATAATATACACCTCAAGCACATACAATTTTACGAGACTAAATAGTTTATACCCAAACACGAACAATTACGATCTATAAACTATTATACCTCACAAACTTTAATAACTCTACTCTACATACCCCTTAATCACTGAAATTAATTTGGTCGAGTAGGGTTTAACATCGCAAGAGTATCAAGGAACGAGATACAATTTCGGCTTAATATATAAGAAAAATGATGAGCATATAAACATAGTTTGAACAAATGAAGAGTTAAAGAAGAATATATGGGATTTCTAAGCCTAGTTCTCAACCTTAACTAATTAAGCTAAAGTCATGATAACATGTCCTAAATTATTAGGAAAACAAAAAGTTAGGTGAATGAAAATAATTATAACAATCATATGAATACTGACATTATATTGGATTCAGGTGGATGCAGGGACCAATACAGTAGCACTCAGCAAAAAGTATCACTATCAGCCAAAAATCAGTAAGTTGCCATAAAATATAATAGTAATAATACATAGAGAATTACAAATTTATTCTTTCAACTTAAATGAGTGTTAGAATAGGTTTTCAAATCGTAAGTTAGTCAAATAAGTCTTTAAACTTTCAATTAATATAGGTATAACCTATTTAAATTTTAGGACGGTCAAATAAGTCTTTAAACTTTCGATTAATATAGGTATAAATTATTGTTTTCTGCATCCTTGAAATTGTAATTTTTAAATTAGCAATTTTACGGAGAGTGAATTTTGTATCTAATAGAACATTAAACTTTTAATTTGTGGTCATATTTAAAAAAAAAAAAAAAACCAAATGGTTATCGAACGCGATTTTCAAAACCTTAATATAAAATAGATAACAAAACAATAAAAATTGGTGCAAAATGGGTGTTGTTTATATGCTTAATTTTCAAAAAACAAAAAATTACAAAACGGAACTATAGTTTTCAAAAACTTCTTTTCATTCATACAATTTGACAAAAGTTTCAAGTGGTTCTTGAAGAAATCTGAAAATAAGCGTAAGCAATTTAGGAGAAAACAAGCATAAACGTCAAGAACAAAATAGTCACCCAACGGAGATTTTAAAAACTAAACACGTAACAGAACATTTTTTTTTCTTTTTTTATATAAAGAAACTTATAACACAAAATTTGGAGTGAAATTAACAATCAGGTTGGGTTGAATTGGTTTGGGGTAGATTGCAAAAGTGAATGTTCAAGGAGATGCAGCAAAGTGTTCAGAAAGAAGATATGTATGCGTGCTTGTGGGACTTGCTGCAGTCGGTGTCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCATGGCAATAAGCCCAAGTGCCCCTAA

mRNA sequence

ATGATGATCAACATTTCCATTACAACCTTAAAGTGTCTATTTATAGTCTTAAAAGAAAAGAACACAATTAGTTCTCAATTGTCCTCGTCTTCAAGGACCAATACAGTAGCACTCAGCAAAAAGTATCACTATCAGCCAAAAATCAATTGCAAAAGTGAATGTTCAAGGAGATGCAGCAAAGTGTTCAGAAAGAAGATATGTATGCGTGCTTGTGGGACTTGCTGCAGTCGGTGTCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCATGGCAATAAGCCCAAGTGCCCCTAA

Coding sequence (CDS)

ATGATGATCAACATTTCCATTACAACCTTAAAGTGTCTATTTATAGTCTTAAAAGAAAAGAACACAATTAGTTCTCAATTGTCCTCGTCTTCAAGGACCAATACAGTAGCACTCAGCAAAAAGTATCACTATCAGCCAAAAATCAATTGCAAAAGTGAATGTTCAAGGAGATGCAGCAAAGTGTTCAGAAAGAAGATATGTATGCGTGCTTGTGGGACTTGCTGCAGTCGGTGTCACTGCGTCCCGCCCGGCACTTACGGCAACCACCAAGCTTGCCCTTGCTATGCTCGCCTCAGGACCCATGGCAATAAGCCCAAGTGCCCCTAA

Protein sequence

MMINISITTLKCLFIVLKEKNTISSQLSSSSRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP

Homology

[Close]

BLAST of IVF0006135 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.3e-26
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 5   ISITTLKCLFIVLKE-----KNTISSQLSSSSRTN----TVALSKKYHYQPKINCKSECS 64
           ++  TL   F++L +      ++ +++ SS S+TN    T A  + YH++P+INC   C+
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 65  RRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           RRCSK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of IVF0006135 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.7e-19
Identity = 47/100 (47.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 11  KCLFIVLKEKNTISSQLSS--SSRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICM 70
           K LF  L     +  Q+ S  + +  + A+S+  +   KI+C   C+ RC    R ++C 
Sbjct: 5   KALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRPRLCN 64

Query: 71  RACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           RACGTCC+RC+CVPPGT GN + CPCYA L THGNK KCP
Sbjct: 65  RACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of IVF0006135 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-18
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 40  KKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLR 99
           KK  Y  KI+C S C  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 100 THGNKPKCP 109
           THG + KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of IVF0006135 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-18
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 46  PKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKP 105
           PKI+C S C  RCS   R  +C RACGTCC+RC+CV PGT GN+  CPCY  L THG + 
Sbjct: 32  PKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRR 91

Query: 106 KCP 109
           KCP
Sbjct: 92  KCP 94

[Close]

BLAST of IVF0006135 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.6e-18
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 47  KINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPK 106
           KI+C   C  RCSK  R K+C+RAC +CCSRC+CVPPGT GN   CPCYA + THG + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 107 CP 109
           CP
Sbjct: 98  CP 99

[Close]

BLAST of IVF0006135 vs. ExPASy TrEMBL
Match: A0A1S3B2G6 (gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 9.2e-40
Identity = 81/102 (79.41%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 9   TLKCLFIVLK--EKNTISSQLSSSSRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 68
           +L C+FI+L    +    +  +  + TNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI
Sbjct: 5   SLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 64

Query: 69  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 65  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of IVF0006135 vs. ExPASy TrEMBL
Match: A0A0A0LMS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.7e-39
Identity = 80/102 (78.43%), Postives = 87/102 (85.29%), Query Frame = 0


Query: 9   TLKCLFIVLK--EKNTISSQLSSSSRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 68
           +L C+FI+L    +    +  +    TNTVAL+KKYHYQPKINCKSECSRRCSKVFRKKI
Sbjct: 5   SLLCIFIILSFLLQGFSEAIATVDEGTNTVALTKKYHYQPKINCKSECSRRCSKVFRKKI 64

Query: 69  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 65  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of IVF0006135 vs. ExPASy TrEMBL
Match: A0A6J1FFC2 (gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-31
Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 33  TNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQAC 92
           TNT AL KK+ Y PKINCK  CSRRC KV RKKICMRACG+CCSRCHCVPPGTYGNHQAC
Sbjct: 31  TNTAALDKKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQAC 90

Query: 93  PCYARLRTHGNKPKCP 109
           PCYARLRTHGN+ KCP
Sbjct: 91  PCYARLRTHGNRLKCP 106

[Close]

BLAST of IVF0006135 vs. ExPASy TrEMBL
Match: A0A6J1JZB3 (gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.6e-31
Identity = 69/102 (67.65%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 7   ITTLKCLFIVLKEKNTISSQLSSSSRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 66
           + T   L + L+  +  S+ ++    TNT AL KK+ Y PKINCK  CSRRC KV RKKI
Sbjct: 27  LCTFVLLLLFLQGLSEASTNVNEG--TNTAALDKKHIYSPKINCKYACSRRCMKVRRKKI 86

Query: 67  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           CMRACG+CCSRCHCVPPGTYGNHQACPCYARLRTHGNK KCP
Sbjct: 87  CMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of IVF0006135 vs. ExPASy TrEMBL
Match: A0A6J1DG94 (gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 9.6e-29
Identity = 64/106 (60.38%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 3   INISITTLKCLFIVLKEKNTISSQLSSSSRTNTVALSKKYHYQPKINCKSECSRRCSKVF 62
           I+     L  LF++        S  + +  +N VA+ KK+   PKINCK  CSRRC K  
Sbjct: 4   ISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCMKAS 63

Query: 63  RKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+TH NKPKCP
Sbjct: 64  RKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of IVF0006135 vs. NCBI nr
Match: XP_008441216.1 (PREDICTED: gibberellin-regulated protein 9 [Cucumis melo])

HSP 1 Score: 171 bits (433), Expect = 6.65e-53
Identity = 82/102 (80.39%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 9   TLKCLFIVLKEKNTISSQLSSS--SRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 68
           +L C+FI+L       S+  ++  + TNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI
Sbjct: 5   SLLCIFIILSFLLQGFSEAITTVDAGTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 64

Query: 69  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 108
           CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 65  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of IVF0006135 vs. NCBI nr
Match: XP_004138815.1 (gibberellin-regulated protein 9 [Cucumis sativus])

HSP 1 Score: 169 bits (429), Expect = 2.71e-52
Identity = 81/102 (79.41%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 9   TLKCLFIVLKEKNTISSQLSSS--SRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 68
           +L C+FI+L       S+  ++    TNTVAL+KKYHYQPKINCKSECSRRCSKVFRKKI
Sbjct: 5   SLLCIFIILSFLLQGFSEAIATVDEGTNTVALTKKYHYQPKINCKSECSRRCSKVFRKKI 64

Query: 69  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 108
           CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP
Sbjct: 65  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of IVF0006135 vs. NCBI nr
Match: XP_038885058.1 (gibberellin-regulated protein 9-like [Benincasa hispida])

HSP 1 Score: 164 bits (416), Expect = 2.60e-50
Identity = 78/102 (76.47%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 9   TLKCLFIVLKEKNTISSQLSSS--SRTNTVALSKKYHYQPKINCKSECSRRCSKVFRKKI 68
           +L C+FI+L       S+  ++    TNTVAL+KKYHY PKINCK ECSRRCSKVFRKKI
Sbjct: 5   SLLCIFIILSILLQGFSEAFTTVDEGTNTVALTKKYHYHPKINCKRECSRRCSKVFRKKI 64

Query: 69  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 108
           CMRACGTCCSRCHCVPPGTYGNHQACPCYARL+THGNKPKCP
Sbjct: 65  CMRACGTCCSRCHCVPPGTYGNHQACPCYARLKTHGNKPKCP 106

[Close]

BLAST of IVF0006135 vs. NCBI nr
Match: XP_022993114.1 (gibberellin-regulated protein 9-like [Cucurbita maxima])

HSP 1 Score: 144 bits (362), Expect = 8.13e-42
Identity = 65/76 (85.53%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 33  TNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQAC 92
           TNT AL KK+ Y PKINCK  CSRRC KV RKKICMRACG+CCSRCHCVPPGTYGNHQAC
Sbjct: 51  TNTAALDKKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQAC 110

Query: 93  PCYARLRTHGNKPKCP 108
           PCYARLRTHGNK KCP
Sbjct: 111 PCYARLRTHGNKLKCP 126

[Close]

BLAST of IVF0006135 vs. NCBI nr
Match: XP_022938854.1 (gibberellin-regulated protein 9 [Cucurbita moschata] >KAG6578328.1 Gibberellin-regulated protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142 bits (359), Expect = 1.26e-41
Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = 0


Query: 33  TNTVALSKKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQAC 92
           TNT AL KK+ Y PKINCK  CSRRC KV RKKICMRACG+CCSRCHCVPPGTYGNHQAC
Sbjct: 31  TNTAALDKKHIYSPKINCKYACSRRCMKVRRKKICMRACGSCCSRCHCVPPGTYGNHQAC 90

Query: 93  PCYARLRTHGNKPKCP 108
           PCYARLRTHGN+ KCP
Sbjct: 91  PCYARLRTHGNRLKCP 106

[Close]

BLAST of IVF0006135 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.2e-27
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 5   ISITTLKCLFIVLKE-----KNTISSQLSSSSRTN----TVALSKKYHYQPKINCKSECS 64
           ++  TL   F++L +      ++ +++ SS S+TN    T A  + YH++P+INC   C+
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 65  RRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           RRCSK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of IVF0006135 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.2e-27
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 5   ISITTLKCLFIVLKE-----KNTISSQLSSSSRTN----TVALSKKYHYQPKINCKSECS 64
           ++  TL   F++L +      ++ +++ SS S+TN    T A  + YH++P+INC   C+
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 65  RRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           RRCSK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of IVF0006135 vs. TAIR 10
Match: AT1G22690.3 (Gibberellin-regulated family protein )

HSP 1 Score: 117.9 bits (294), Expect = 5.2e-27
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 5   ISITTLKCLFIVLKE-----KNTISSQLSSSSRTN----TVALSKKYHYQPKINCKSECS 64
           ++  TL   F++L +      ++ +++ SS S+TN    T A  + YH++P+INC   C+
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 65  RRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 109
           RRCSK  RKK+C RACG+CC++C CVPPGT GN  +CPCYA +RTHGNK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of IVF0006135 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 40  KKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLR 99
           KK  Y  KI+C S C  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 30  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 89

Query: 100 THGNKPKCP 109
           THG + KCP
Sbjct: 90  THGGRRKCP 98

[Close]

BLAST of IVF0006135 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-19
Identity = 41/69 (59.42%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 40  KKYHYQPKINCKSECSRRCSKVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLR 99
           KK  Y  KI+C S C  RC    R ++C RACGTCC RC+CVPPGTYGN+  C CYA L 
Sbjct: 29  KKNGYAKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLT 88

Query: 100 THGNKPKCP 109
           THG + KCP
Sbjct: 89  THGGRRKCP 97

The following BLAST results are available for this feature:

BLAST of IVF0006135 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK5	7.3e-26	49.56	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]
Q93X17	8.7e-19	47.00	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	1.9e-18	59.42	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
F4IQJ4	3.3e-18	60.32	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46688	5.6e-18	61.29	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]

BLAST of IVF0006135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B2G6	9.2e-40	79.41	gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=...	[more]
A0A0A0LMS4	2.7e-39	78.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1	[more]
A0A6J1FFC2	2.1e-31	84.21	gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE...	[more]
A0A6J1JZB3	4.6e-31	67.65	gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231...	[more]
A0A6J1DG94	9.6e-29	60.38	gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 P...	[more]

BLAST of IVF0006135 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441216.1	6.65e-53	80.39	PREDICTED: gibberellin-regulated protein 9 [Cucumis melo]	[more]
XP_004138815.1	2.71e-52	79.41	gibberellin-regulated protein 9 [Cucumis sativus]	[more]
XP_038885058.1	2.60e-50	76.47	gibberellin-regulated protein 9-like [Benincasa hispida]	[more]
XP_022993114.1	8.13e-42	85.53	gibberellin-regulated protein 9-like [Cucurbita maxima]	[more]
XP_022938854.1	1.26e-41	84.21	gibberellin-regulated protein 9 [Cucurbita moschata] >KAG6578328.1 Gibberellin-r...	[more]

BLAST of IVF0006135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22690.1	5.2e-27	49.56	Gibberellin-regulated family protein	[more]
AT1G22690.2	5.2e-27	49.56	Gibberellin-regulated family protein	[more]
AT1G22690.3	5.2e-27	49.56	Gibberellin-regulated family protein	[more]
AT1G75750.1	1.4e-19	59.42	GAST1 protein homolog 1	[more]
AT1G75750.2	1.4e-19	59.42	GAST1 protein homolog 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 49..108 e-value: 8.0E-22 score: 77.1
None	No IPR available	PANTHER	PTHR23201:SF20	GIBBERELLIN-REGULATED PROTEIN 9	coord: 28..108
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 28..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006135.2	IVF0006135.2	mRNA