IVF0006107 (gene) Melon (IVF77) v1

Overview


Name	IVF0006107
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Glutaredoxin domain-containing protein
Location	chr08: 5764480 .. 5766432 (-)
RNA-Seq Expression	IVF0006107
Synteny	IVF0006107

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCGACGCAACCAGAGAAATGCAATCATCAGTTGATTCAAAGAAGAAAGGCGCGGAGGAGGAGAAAGTAGAGAAAGAGGAAGAGAAAGAGAAAGAAAAAGAGAAGATTGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGAGATTGTTGTGGGAGTGGATGTGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCCCAATTCTTGAGATTTCAATTTCAGGCTTTCAGCCAACAGTTTGTAATTGAAAATTGGATCTGTTTGCTGTTGTAAACTCAATGAATTCAAATTGAATCTGTATCTGTTTCGTTAAGAACAATTGTTCAGTGAGATGAAGGCGAATAAACACAATTCATTTATCATGGCACGATATTTATGCTAAACCCTTTAACTGATTGAATTGAGCACTCGATTTCATTGTTTTTTGTGGATCATTCAATTATAATTCTTTAATTTCATTTCATTTCTAAAGAAAAATAAAAAAAAAGGGTCAAAAGATATTATTTCCCTTTTTTAAAATTATAATAAAAAAATTGCTATATTATGAGATGAAGTGTCAGTTTGGTACGGGAGAAACAGAAAGAGAGTGATGACCCGTCAAAAGGCCCAGTAGGCCAAATGGGCCTCATAGTATATTATGGAGATTTAGAGTGTCGAAGGATTGATTGTGTGTAATTTTGGTGGAAGATGATGATGCGGGGATTTCATTTTCAGTTGACTCTGGTTGTGGCGGTGATCACTCTCGCCGCCCTTTATCCGAGAGATGGCCTTCCCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCATAATGTCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCGTATGTTCTCTTCTTCTCTTTCCCTTTTTTAATTAGACAAACACACGCTTTATTATTTTCTTTTTTCCTTTTTCTTATTCCCTGAATTATTCTGTGGCTCGTTGCGGCATGTCTGCACATTGTCATCAGTCGATCAGCAATCATTGTTTTAATGGGTTGTTTGCTGCCAATGAACCTGAAATTCTAATATTACCGAATCCCGGCTTTTCGAGAAATGAATATAGGATATACGAGTTATTCATTCGCTTGTTTTTTTACAGATTTTGGACTTGAATAAGTAGCTTATATCTCCATCTGATCAAATTAGTCGGCCCCATTTTGACAAAGCCAGAAAATTTGCTTCATTGCTATTGGATTGGAATTCTTCATCTCTTTCTTGGTGGTTCCAACTGCCAACTGTTTTCTTTCCTCTCTCTCTTGGTTTTGTAATTTCATCTATCAACCAAACATGCCTTTTGTTTCTTTTAAAATGGAAAGAAGGAATCTTCCTACGAAAAAACTGAAAAACTTCAAAATATGGTCCTTTAAATGGTTTCTCTCTGTTCCTTTCTAATTATCGAGCGACTCATATTCTATTGTTGTTTTATTTTTCTGGAAGATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGGTATTTGTTCTGTTTAATTTTGTTGATCGTTTCTAATATTAATAATTGTTTGAAGAAGCTTTTTCATGACCACATAATGGGTATCTACATTTACTCAGATGATGGACCTCAAATTCAGAGTGTTCTACTAGACCTGACTGGAAAGCGGACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGTTCTGATGGTGAGCTCTCTCAGCTCCTTTATTATTAAGAAATTCTTCATACCTTTTTCTAGTGGAGTAAATTTCTCATTTCCATCACTGTTTGGTTCGGTGCGGTTTTATACTTTTTACAGATCTGAAAGCTGCGGTTGCTAGTGGTCAGTTGCAGAAACTTCTGGCTTCAACTTGA

mRNA sequence

ATGGCTAGCGACGCAACCAGAGAAATGCAATCATCAGTTGATTCAAAGAAGAAAGGCGCGGAGGAGGAGAAAGTAGAGAAAGAGGAAGAGAAAGAGAAAGAAAAAGAGAAGATTGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGAGATTGTTGTGGGAGTGGATGTGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGAGAGTGATGACCCGTCAAAAGGCCCAATGATGATGCGGGGATTTCATTTTCAGTTGACTCTGGTTGTGGCGGTGATCACTCTCGCCGCCCTTTATCCGAGAGATGGCCTTCCCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCATAATGTCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGACCTCAAATTCAGAGTGTTCTACTAGACCTGACTGGAAAGCGGACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGTTCTGATGATCTGAAAGCTGCGGTTGCTAGTGGTCAGTTGCAGAAACTTCTGGCTTCAACTTGA

Coding sequence (CDS)

ATGGCTAGCGACGCAACCAGAGAAATGCAATCATCAGTTGATTCAAAGAAGAAAGGCGCGGAGGAGGAGAAAGTAGAGAAAGAGGAAGAGAAAGAGAAAGAAAAAGAGAAGATTGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGAGATTGTTGTGGGAGTGGATGTGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGAGAGTGATGACCCGTCAAAAGGCCCAATGATGATGCGGGGATTTCATTTTCAGTTGACTCTGGTTGTGGCGGTGATCACTCTCGCCGCCCTTTATCCGAGAGATGGCCTTCCCGGAGCTGAAGCTGCCACTTCCACTTCCGCTTTCGTTCATAATGTCATCTACTCTAACAGGATTGCTATGTTCTCCAAATCCTACTGCCCATATTGCTTGGGTGCCAAACGTATATTCAGTGAACTCCATGAAAAACCTTTTGTTGTGGAGCTTGATCTTCGAGATGATGGACCTCAAATTCAGAGTGTTCTACTAGACCTGACTGGAAAGCGGACTGTTCCTCAAATTTTTGTGAATGGCAAGCACATTGGTGGTTCTGATGATCTGAAAGCTGCGGTTGCTAGTGGTCAGTTGCAGAAACTTCTGGCTTCAACTTGA

Protein sequence

MASDATREMQSSVDSKKKGAEEEKVEKEEEKEKEKEKIVKLPPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKESDDPSKGPMMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAST

Homology

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BLAST of IVF0006107 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.2e-36
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 119 AEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQIQ 178
           A AA S SAFV N I SN+I +FSKSYCPYCL +KRIFS+L E+PFVVELD R+DG QIQ
Sbjct: 27  AGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQ 86

Query: 179 SVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAST 223
             LL+  G+RTVPQ+FVNGKHIGGSDDL AA+ SGQLQKLLA++
Sbjct: 87  YELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

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BLAST of IVF0006107 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.8e-34
Identity = 73/121 (60.33%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 102 VAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHE 161
           +AV  L  L   D    A A  S SAFV N IYSNRI +FSK+YCPY + AKRIF +L E
Sbjct: 10  IAVFLLLVLAEAD---PAAATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKE 69

Query: 162 KPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAS 221
            P++VELDLR+DG +IQSVLLDL G+ TVPQ+FVNG+H+GGSDD   A ++GQLQKLL +
Sbjct: 70  NPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGN 127

Query: 222 T 223
           +
Sbjct: 130 S 127

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BLAST of IVF0006107 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 104 VITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKP 163
           V+ L AL     +  + A++  + FV   I S++I +FSKSYCPYC  AK +F EL + P
Sbjct: 10  VMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVP 69

Query: 164 FVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 220
           +VVELD R+DG  IQ+ L ++ G+RTVPQ+F+NGKH+GGSDD   A  SG+L KLL
Sbjct: 70  YVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125

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BLAST of IVF0006107 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-25
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 103 AVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELH-- 162
           A+I LAAL        A    S S+FV + + ++ + +FSKSYCPYC  AK +F EL   
Sbjct: 15  ALIALAALG-----SAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAVFKELELK 74

Query: 163 EKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 220
           ++P+VVELD R+DG +IQ  L D+ G+RTVPQ+FV+GKH+GGSDD   A  SG+L KLL
Sbjct: 75  KEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESGKLAKLL 128

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BLAST of IVF0006107 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.1e-19
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 132 VIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVP 191
           ++ SN + +FSK+YCPYC   K++  +L  K  VVELD   DG +IQ+ L + TG+RTVP
Sbjct: 9   LVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAEWTGQRTVP 68

Query: 192 QIFVNGKHIGGSDDLKAAVASGQLQKLL 220
            +F+ GKHIGG D   A  + GQL  LL
Sbjct: 69  NVFIGGKHIGGCDSTTAKHSQGQLVPLL 96

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BLAST of IVF0006107 vs. ExPASy TrEMBL
Match: A0A0A0KKK8 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G504670 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 203/236 (86.02%), Postives = 208/236 (88.14%), Query Frame = 0


Query: 1   MASDATREMQSSVDSKKKGAEEEKVEKEEEKEKEKEKIVKLPPPPEKPLPGDCCGSGCVR 60
           MAS+ TREMQSSVDSKKKG EEEK     EKEKEKE++VKLPPPPEKPLPGDCCGSGCVR
Sbjct: 1   MASEGTREMQSSVDSKKKGVEEEKA----EKEKEKEEMVKLPPPPEKPLPGDCCGSGCVR 60

Query: 61  CVWDVYYEELEDYNKLCE-------KESDDPSKGPM-------MMRGFHFQLTLVVAVIT 120
           CVWDVYYEELEDYNKLCE       KE DDPSK  M       MMRGFHFQLTLV+AVIT
Sbjct: 61  CVWDVYYEELEDYNKLCEKGSGGTKKEGDDPSKAQMMTTTTTTMMRGFHFQLTLVLAVIT 120

Query: 121 LAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVV 180
           LAALYPRD L GAEAATSTSAFV NVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVV
Sbjct: 121 LAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVV 180

Query: 181 ELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAST 223
           ELDLRDDG QIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVA+GQLQKLLAST
Sbjct: 181 ELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVANGQLQKLLAST 232

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BLAST of IVF0006107 vs. ExPASy TrEMBL
Match: A0A5A7SKA5 (Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001560 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.3e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 89  MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY 148
           MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY
Sbjct: 1   MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY 60

Query: 149 CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA 208
           CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA
Sbjct: 61  CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA 120

Query: 209 AVASGQLQKLLAST 223
           AVASGQLQKLLAST
Sbjct: 121 AVASGQLQKLLAST 134

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BLAST of IVF0006107 vs. ExPASy TrEMBL
Match: A0A1S3B2P3 (glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.3e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 89  MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY 148
           MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY
Sbjct: 1   MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY 60

Query: 149 CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA 208
           CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA
Sbjct: 61  CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA 120

Query: 209 AVASGQLQKLLAST 223
           AVASGQLQKLLAST
Sbjct: 121 AVASGQLQKLLAST 134

[Close]

BLAST of IVF0006107 vs. ExPASy TrEMBL
Match: A0A251NCG7 (Glutaredoxin domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G163800 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 7.2e-63
Identity = 140/224 (62.50%), Postives = 164/224 (73.21%), Query Frame = 0


Query: 5   ATREMQSSVDSKKKGAEE--------EKVEKEEEKEKEKEKIVKLPPPPEKPLPGDCCGS 64
           AT   Q+S+D ++  A +        E  + +EE+ K  ++ V  PPPPEKP PGDCCGS
Sbjct: 64  ATTTAQNSMDDREGDAAKKTQATQPIEAAKSKEEELKPVKEAVPPPPPPEKPEPGDCCGS 123

Query: 65  GCVRCVWDVYYEELEDYNKLCEKESDDPSKGPMMMRGFHFQLTLVVAVITLAALYPRDGL 124
           GCVRCVWDVYY+EL++YNKL +K S   S     MR F       +A +  AAL     +
Sbjct: 124 GCVRCVWDVYYDELDEYNKLYKKRS---SCRRGKMRRFELLGCAAIAAVA-AALVLLGNV 183

Query: 125 PGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQ 184
             AEA+TS SAFV NVIYSN+IA+FSKSYCPYCL AKRIFSELHE+PFVVELDLRDDG Q
Sbjct: 184 VVAEASTSPSAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQ 243

Query: 185 IQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 221
           IQSVLLD+ G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL+
Sbjct: 244 IQSVLLDIVGRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLLS 283

[Close]

BLAST of IVF0006107 vs. ExPASy TrEMBL
Match: A0A6J5Y0S6 (Glutaredoxin domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS45107 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 133/198 (67.17%), Postives = 151/198 (76.26%), Query Frame = 0


Query: 23  EKVEKEEEKEKEKEKIVKLPPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKESD 82
           E  +  EE+ K  ++    PPPPEKP PGDCCGSGCVRCVWDVYY+EL++YNKL +K S 
Sbjct: 119 EAAKSTEEELKPVKEAAPPPPPPEKPEPGDCCGSGCVRCVWDVYYDELDEYNKLYKKRS- 178

Query: 83  DPSKGPMMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFS 142
             S     MR F       +A +  AAL     +  AEA+TS SAFV NVIYSN+IA+FS
Sbjct: 179 --SCRRGKMRRFELLGGAAIAAVA-AALVLLGNVVVAEASTSPSAFVQNVIYSNKIAIFS 238

Query: 143 KSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGG 202
           KSYCPYCL AKRIFSELHE+PFVVELDLRDDG QIQSVLLD+ G+ TVPQIFVNGKHIGG
Sbjct: 239 KSYCPYCLRAKRIFSELHEQPFVVELDLRDDGAQIQSVLLDIVGRTTVPQIFVNGKHIGG 298

Query: 203 SDDLKAAVASGQLQKLLA 221
           SDDLKAAV SGQLQKLL+
Sbjct: 299 SDDLKAAVLSGQLQKLLS 312

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BLAST of IVF0006107 vs. NCBI nr
Match: XP_008440783.1 (PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis melo var. makuwa] >TYK12574.1 glutaredoxin-C3 [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (683), Expect = 1.17e-88
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 89  MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY 148
           MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY
Sbjct: 1   MMMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPY 60

Query: 149 CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA 208
           CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA
Sbjct: 61  CLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKA 120

Query: 209 AVASGQLQKLLAST 222
           AVASGQLQKLLAST
Sbjct: 121 AVASGQLQKLLAST 134

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BLAST of IVF0006107 vs. NCBI nr
Match: XP_004149976.1 (glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 [Cucumis sativus])

HSP 1 Score: 251 bits (642), Expect = 2.59e-82
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 90  MMRGFHFQLTLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYC 149
           MMRGFHFQLTLV+AVITLAALYPRD L GAEAATSTSAFV NVIYSNRIAMFSKSYCPYC
Sbjct: 9   MMRGFHFQLTLVLAVITLAALYPRDALTGAEAATSTSAFVQNVIYSNRIAMFSKSYCPYC 68

Query: 150 LGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 209
           LGAKRIFSELHEKPFVVELDLRDDG QIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA
Sbjct: 69  LGAKRIFSELHEKPFVVELDLRDDGSQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAA 128

Query: 210 VASGQLQKLLAST 222
           VA+GQLQKLLAST
Sbjct: 129 VANGQLQKLLAST 141

[Close]

BLAST of IVF0006107 vs. NCBI nr
Match: XP_007202718.2 (uncharacterized protein LOC18770257 [Prunus persica] >XP_020423671.1 uncharacterized protein LOC18770257 [Prunus persica] >ONH96996.1 hypothetical protein PRUPE_7G163800 [Prunus persica] >ONH96997.1 hypothetical protein PRUPE_7G163800 [Prunus persica])

HSP 1 Score: 252 bits (644), Expect = 1.53e-80
Identity = 130/181 (71.82%), Postives = 143/181 (79.01%), Query Frame = 0


Query: 39  VKLPPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKESDDPSKGPMMMRGFHFQL 98
           V  PPPPEKP PGDCCGSGCVRCVWDVYY+EL++YNKL +K S   S     MR F    
Sbjct: 106 VPPPPPPEKPEPGDCCGSGCVRCVWDVYYDELDEYNKLYKKRS---SCRRGKMRRFELLG 165

Query: 99  TLVVAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSE 158
              +A +  AAL     +  AEA+TS SAFV NVIYSN+IA+FSKSYCPYCL AKRIFSE
Sbjct: 166 CAAIAAVA-AALVLLGNVVVAEASTSPSAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSE 225

Query: 159 LHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKL 218
           LHE+PFVVELDLRDDG QIQSVLLD+ G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKL
Sbjct: 226 LHEQPFVVELDLRDDGAQIQSVLLDIVGRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKL 282

[Close]

BLAST of IVF0006107 vs. NCBI nr
Match: XP_021815063.1 (uncharacterized protein LOC110757673 [Prunus avium])

HSP 1 Score: 252 bits (643), Expect = 2.10e-80
Identity = 130/178 (73.03%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 42  PPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKESDDPSKGPMMMRGFHFQLTLV 101
           PPPPEKP PGDCCGSGCVRCVWDVYY+ELEDYNKL +K S   S     MR         
Sbjct: 108 PPPPEKPEPGDCCGSGCVRCVWDVYYDELEDYNKLYKKRS---SCRRGKMRRLELLGGAA 167

Query: 102 VAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHE 161
           +A +  AAL     +  AEA+TS SAFV NVIYSN+IA+FSKSYCPYCL AKRIFSELHE
Sbjct: 168 IAAVA-AALVLLGNVVVAEASTSPSAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHE 227

Query: 162 KPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 219
           +PFVVELDLRDDG QIQSVLLD+ G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL
Sbjct: 228 QPFVVELDLRDDGAQIQSVLLDIVGRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLL 281

[Close]

BLAST of IVF0006107 vs. NCBI nr
Match: XP_008241771.1 (PREDICTED: uncharacterized protein LOC103340163 [Prunus mume])

HSP 1 Score: 251 bits (642), Expect = 3.07e-80
Identity = 129/178 (72.47%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 42  PPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKESDDPSKGPMMMRGFHFQLTLV 101
           PPPPEKP PGDCCGSGCVRCVWDVYY+EL++YNKL +K S   S     MR F       
Sbjct: 109 PPPPEKPEPGDCCGSGCVRCVWDVYYDELDEYNKLYKKRS---SCRRGKMRRFELLGGAA 168

Query: 102 VAVITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHE 161
           +A +  AAL     +  AEA+TS SAFV NVIYSN+IA+FSKSYCPYCL AKRIFSELHE
Sbjct: 169 IAAVA-AALVLLGNVVVAEASTSPSAFVQNVIYSNKIAIFSKSYCPYCLRAKRIFSELHE 228

Query: 162 KPFVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 219
           +PFVVELDLRDDG QIQSVLLD+ G+ TVPQIFVNGKHIGGSDDLKAAV SGQLQKLL
Sbjct: 229 QPFVVELDLRDDGAQIQSVLLDIVGRTTVPQIFVNGKHIGGSDDLKAAVLSGQLQKLL 282

[Close]

BLAST of IVF0006107 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.0e-37
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 119 AEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQIQ 178
           A AA S SAFV N I SN+I +FSKSYCPYCL +KRIFS+L E+PFVVELD R+DG QIQ
Sbjct: 27  AGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIFSQLKEEPFVVELDQREDGDQIQ 86

Query: 179 SVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLAST 223
             LL+  G+RTVPQ+FVNGKHIGGSDDL AA+ SGQLQKLLA++
Sbjct: 87  YELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQKLLAAS 130

[Close]

BLAST of IVF0006107 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 104 VITLAALYPRDGLPGAEAATSTSAFVHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKP 163
           V+ L AL     +  + A++  + FV   I S++I +FSKSYCPYC  AK +F EL + P
Sbjct: 10  VMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVP 69

Query: 164 FVVELDLRDDGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLL 220
           +VVELD R+DG  IQ+ L ++ G+RTVPQ+F+NGKH+GGSDD   A  SG+L KLL
Sbjct: 70  YVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGELAKLL 125

[Close]

BLAST of IVF0006107 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 85.9 bits (211), Expect = 4.5e-17
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 132 VIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELDLRDDGPQIQSVLLDLTGKRTVP 191
           ++ S  + +FSK+YCPYC+  K +  +L  K   VELD   DG QIQS L + TG+RTVP
Sbjct: 9   IVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVP 68

Query: 192 QIFVNGKHIGGSDDLKAAVASGQLQKLL 220
            +F+ G HIGG D        G+L  LL
Sbjct: 69  NVFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of IVF0006107 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-16
Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 121 AATSTSAF-------VHNVIYSNRIAMFSKSYCPYCLGAKRIFSELHEKPFVVELD-LRD 180
           A++S+S+F       +   +  N + ++SK++C YC   K +F  L  +P VVELD L  
Sbjct: 58  ASSSSSSFGSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGP 117

Query: 181 DGPQIQSVLLDLTGKRTVPQIFVNGKHIGGSDDLKAAVASGQLQKLLA 221
            GPQ+Q VL  LTG+ TVP +FV GKHIGG  D       G L+ +LA
Sbjct: 118 QGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLA 165

[Close]

BLAST of IVF0006107 vs. TAIR 10
Match: AT5G17280.1 (CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 5   ATREMQSSVDSKKKGAEEEKVEKEEEKEKEKEKIVKLPPPPEKPLPGDCCGSGCVRCVWD 64
           AT E ++ V++ K     E+  K+E ++K KE  V +PPPPEKP PGDCCGSGCVRCVWD
Sbjct: 62  ATTESKNLVEASK-----EETNKKETEDK-KEVGVSVPPPPEKPEPGDCCGSGCVRCVWD 121

Query: 65  VYYEELEDYNKLCEKES 82
           VYY+ELEDYNK    E+
Sbjct: 122 VYYDELEDYNKQLSGET 132

The following BLAST results are available for this feature:

BLAST of IVF0006107 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVX1	4.2e-36	72.12	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	8.8e-34	60.33	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q8LFQ6	2.3e-26	50.86	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	2.6e-25	51.26	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
P55143	6.1e-19	48.86	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]

BLAST of IVF0006107 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK8	1.1e-103	86.02	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G50467...	[more]
A0A5A7SKA5	3.3e-68	100.00	Glutaredoxin-C3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0015...	[more]
A0A1S3B2P3	3.3e-68	100.00	glutaredoxin-C3 OS=Cucumis melo OX=3656 GN=LOC103485100 PE=3 SV=1	[more]
A0A251NCG7	7.2e-63	62.50	Glutaredoxin domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G1638...	[more]
A0A6J5Y0S6	1.2e-62	67.17	Glutaredoxin domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP...	[more]

BLAST of IVF0006107 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440783.1	1.17e-88	100.00	PREDICTED: glutaredoxin-C3 [Cucumis melo] >KAA0025699.1 glutaredoxin-C3 [Cucumis...	[more]
XP_004149976.1	2.59e-82	95.49	glutaredoxin-C3 [Cucumis sativus] >KAE8647600.1 hypothetical protein Csa_003338 ...	[more]
XP_007202718.2	1.53e-80	71.82	uncharacterized protein LOC18770257 [Prunus persica] >XP_020423671.1 uncharacter...	[more]
XP_021815063.1	2.10e-80	73.03	uncharacterized protein LOC110757673 [Prunus avium]	[more]
XP_008241771.1	3.07e-80	72.47	PREDICTED: uncharacterized protein LOC103340163 [Prunus mume]	[more]

BLAST of IVF0006107 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77370.1	3.0e-37	72.12	Glutaredoxin family protein	[more]
AT5G20500.1	1.6e-27	50.86	Glutaredoxin family protein	[more]
AT5G40370.1	4.5e-17	45.45	Glutaredoxin family protein	[more]
AT4G28730.1	1.0e-16	41.67	Glutaredoxin family protein	[more]
AT5G17280.1	2.9e-16	58.44	CONTAINS InterPro DOMAIN/s: Oxidoreductase-like, N-terminal (InterPro:IPR019180)...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 17..38
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 119..222 e-value: 6.3E-35 score: 121.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..42
None	No IPR available	PANTHER	PTHR45694:SF4	GLUTAREDOXIN-C3	coord: 109..221
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 109..221
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 126..222 score: 22.379168
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 137..218 e-value: 1.24378E-41 score: 134.59
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 183..196 score: 52.38 coord: 138..156 score: 40.35 coord: 197..210 score: 47.62
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 138..219 e-value: 1.2E-27 score: 93.9
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 138..200 e-value: 1.3E-15 score: 57.3
IPR019180	Oxidoreductase-like, N-terminal	PFAM	PF09791	Oxidored-like	coord: 39..79 e-value: 2.0E-14 score: 53.0
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 140..155
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 128..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006107.1	IVF0006107.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity