IVF0006102 (gene) Melon (IVF77) v1

Overview
NameIVF0006102
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr03: 4242302 .. 4242640 (+)
RNA-Seq ExpressionIVF0006102
SyntenyIVF0006102
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCACACTTAGTTTTTGCCATTTTGATCGTGGCTGTAATTTCAACAAGTTCACCTTGGAGAGCCTTCGCTGACGAACGCTACGACTACCGTCTCTCTTATTCTCCTCTGCCGCCGCTTCATCAACGAATAATCCTCTTCTTCAGCCACCACGTCTCTTCCTCACCGCGGTCGTGGTCGAATAACTGGTCTTCCCGGAAACTACTCCGCCATATAAAGGCTGAGCGTAAATACAACTGCCTCAAAGAACCTGAAAAACAATATAAAGATCCAGCGAATAGTCAAGAACCTTGGCCAAGGTGCCCCATGCCTGCATTTTCACCACCTCCATTCTAG

mRNA sequence

ATGGCGGCACACTTAGTTTTTGCCATTTTGATCGTGGCTGTAATTTCAACAAGTTCACCTTGGAGAGCCTTCGCTGACGAACGCTACGACTACCGTCTCTCTTATTCTCCTCTGCCGCCGCTTCATCAACGAATAATCCTCTTCTTCAGCCACCACGTCTCTTCCTCACCGCGGTCGTGGTCGAATAACTGGTCTTCCCGGAAACTACTCCGCCATATAAAGGCTGAGCGTAAATACAACTGCCTCAAAGAACCTGAAAAACAATATAAAGATCCAGCGAATAGTCAAGAACCTTGGCCAAGGTGCCCCATGCCTGCATTTTCACCACCTCCATTCTAG

Coding sequence (CDS)

ATGGCGGCACACTTAGTTTTTGCCATTTTGATCGTGGCTGTAATTTCAACAAGTTCACCTTGGAGAGCCTTCGCTGACGAACGCTACGACTACCGTCTCTCTTATTCTCCTCTGCCGCCGCTTCATCAACGAATAATCCTCTTCTTCAGCCACCACGTCTCTTCCTCACCGCGGTCGTGGTCGAATAACTGGTCTTCCCGGAAACTACTCCGCCATATAAAGGCTGAGCGTAAATACAACTGCCTCAAAGAACCTGAAAAACAATATAAAGATCCAGCGAATAGTCAAGAACCTTGGCCAAGGTGCCCCATGCCTGCATTTTCACCACCTCCATTCTAG

Protein sequence

MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSWSNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF
Homology
BLAST of IVF0006102 vs. ExPASy TrEMBL
Match: A0A5A7UHY5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00150 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.0e-57
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW 60
           MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW
Sbjct: 1   MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW 60

Query: 61  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 113
           SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF
Sbjct: 61  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 112

BLAST of IVF0006102 vs. ExPASy TrEMBL
Match: A0A0A0KCN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058710 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-42
Identity = 91/112 (81.25%), Postives = 96/112 (85.71%), Query Frame = 0

Query: 1   MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW 60
           MAAH VFAIL+VAVIS +SPWRA ADERYDY LS SPL PLH  IILFFSHHVS SP SW
Sbjct: 1   MAAHFVFAILVVAVISPTSPWRASADERYDYLLSSSPLLPLHHPIILFFSHHVSPSPWSW 60

Query: 61  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 113
           SN  SSRKLLRHI  ERKYNCLKEPEKQ+KDP +SQ+PWPRCPMPAF PPPF
Sbjct: 61  SNR-SSRKLLRHINPERKYNCLKEPEKQFKDPVSSQKPWPRCPMPAFPPPPF 111

BLAST of IVF0006102 vs. ExPASy TrEMBL
Match: A0A0A0KEF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.5e-04
Identity = 36/110 (32.73%), Postives = 52/110 (47.27%), Query Frame = 0

Query: 3   AHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSWSN 62
           A+L  AIL+     + S     A     Y +   P PP   R +LF + H S  P   + 
Sbjct: 6   AYLFLAILLAVASFSPSSLSIAATAAPSYGI---PYPPPLPRPLLFHNDHSSLPPSPAAE 65

Query: 63  NWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 113
            + + K  R +  ERK  C + P    KD   +++PWP+CP+P   PPPF
Sbjct: 66  EYPA-KSPRRVNGERKDKCSEAPRNGNKDAKPNKDPWPKCPVPKSPPPPF 111

BLAST of IVF0006102 vs. NCBI nr
Match: KAA0054910.1 (hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa] >TYK22698.1 hypothetical protein E5676_scaffold1163G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (593), Expect = 3.73e-77
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW 60
           MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW
Sbjct: 1   MAAHLVFAILIVAVISTSSPWRAFADERYDYRLSYSPLPPLHQRIILFFSHHVSSSPRSW 60

Query: 61  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 112
           SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF
Sbjct: 61  SNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQEPWPRCPMPAFSPPPF 112

BLAST of IVF0006102 vs. NCBI nr
Match: KAA0054906.1 (hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22694.1 hypothetical protein E5676_scaffold1163G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 53.9 bits (128), Expect = 1.61e-06
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 0

Query: 37  PLPPLHQRIILFFSHHVSSSPRSWSNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQ 96
           P PP   R +LF + H SS P+S +      K L+ +  ERK  C + P    KD  +S+
Sbjct: 37  PYPPPLPRSLLFHNDH-SSLPQSPAAEEYPAKPLQRVNGERKDKCTEAPRNGNKDAKSSK 96

Query: 97  EPWPRCPMPAFSPPPF 112
           +PWP+CP+    PPPF
Sbjct: 97  DPWPKCPVSKSPPPPF 111

BLAST of IVF0006102 vs. NCBI nr
Match: KAE8646677.1 (hypothetical protein Csa_023590, partial [Cucumis sativus])

HSP 1 Score: 52.8 bits (125), Expect = 3.18e-06
Identity = 28/76 (36.84%), Postives = 40/76 (52.63%), Query Frame = 0

Query: 37  PLPPLHQRIILFFSHHVSSSPRSWSNNWSSRKLLRHIKAERKYNCLKEPEKQYKDPANSQ 96
           P PP   R +LF + H S  P   +  + + K  R +  ERK  C + P    KD   ++
Sbjct: 21  PYPPPLPRPLLFHNDHSSLPPSPAAEEYPA-KSPRRVNGERKDKCSEAPRNGNKDAKPNK 80

Query: 97  EPWPRCPMPAFSPPPF 112
           +PWP+CP+P   PPPF
Sbjct: 81  DPWPKCPVPKSPPPPF 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UHY51.0e-57100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KCN73.5e-4281.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058710 PE=4 SV=1[more]
A0A0A0KEF98.5e-0432.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0054910.13.73e-77100.00hypothetical protein E6C27_scaffold43052G00380 [Cucumis melo var. makuwa] >TYK22... [more]
KAA0054906.11.61e-0639.47hypothetical protein E6C27_scaffold43052G00340 [Cucumis melo var. makuwa] >TYK22... [more]
KAE8646677.13.18e-0636.84hypothetical protein Csa_023590, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0006102.2IVF0006102.2mRNA