IVF0006055 (gene) Melon (IVF77) v1

Overview


Name	IVF0006055
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Calcium-binding EF-hand
Location	chr04: 23711939 .. 23712853 (+)
RNA-Seq Expression	IVF0006055
Synteny	IVF0006055

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGGTCCCTACTCTATAAATACAAAACAAAAACGTAACAAACCCATTTCAAACATTTATCTCACGACCGAGTCCCCACCCCACACACACACACACACACACACACCGACTCTCACACTACTCCCATTTAATCAACCCACACACAATTATGGCGGTGGTCGTTATCGACGGATCCACGGTTAGGAACTTCGTCAACGACGAACCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGCAAGGCCTTCGAGACCCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTTGCTACTACCCCCGAACAACTCACCCAACTCTACGATTCCATCTTCGAGCAGTTCGATTGTGATAAAAGCGGTACTGTTGATGCCGAAGAGTTCCGTACGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCGGAGCTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCGGCCAATCGTCCACCTGATCGCGATTGCTACCGGTTTGCTGGTTCCCTTTCGTTTTTCTGCTAATTTTCTTCAGATATGAACATGTGTGTGAATCTGATTTCAGAATAAAATAGATCTTTATTCGCCGTTTACGGTGGATGGAATGATCGATTTAGATTTTAACATGTAGAGATTTAGACGATTAGATGAATATGGACTCTAATGATCAATATTGCTCTCGTCTTTTTTACGATTTTCGGAATTCTTTTTTATTTTTCCTTGATAAATATGTCCTCCATTACTACATCCATCTTTGTGAGTGAGGAATTTTCTTACTATCTTATATATATATAAAAAGAATACATTGATTTTTTTT

mRNA sequence

CGCGGTCCCTACTCTATAAATACAAAACAAAAACGTAACAAACCCATTTCAAACATTTATCTCACGACCGAGTCCCCACCCCACACACACACACACACACACACACCGACTCTCACACTACTCCCATTTAATCAACCCACACACAATTATGGCGGTGGTCGTTATCGACGGATCCACGGTTAGGAACTTCGTCAACGACGAACCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGCAAGGCCTTCGAGACCCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTTGCTACTACCCCCGAACAACTCACCCAACTCTACGATTCCATCTTCGAGCAGTTCGATTGTGATAAAAGCGGTACTGTTGATGCCGAAGAGTTCCGTACGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCGGAGCTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCGGCCAATCGTCCACCTGATCGCGATTGCTACCGGTTTGCTGGTTCCCTTTCGTTTTTCTGCTAATTTTCTTCAGATATGAACATGTGTGTGAATCTGATTTCAGAATAAAATAGATCTTTATTCGCCGTTTACGGTGGATGGAATGATCGATTTAGATTTTAACATGTAGAGATTTAGACGATTAGATGAATATGGACTCTAATGATCAATATTGCTCTCGTCTTTTTTACGATTTTCGGAATTCTTTTTTATTTTTCCTTGATAAATATGTCCTCCATTACTACATCCATCTTTGTGAGTGAGGAATTTTCTTACTATCTTATATATATATAAAAAGAATACATTGATTTTTTTT

Coding sequence (CDS)

ATGGCGGTGGTCGTTATCGACGGATCCACGGTTAGGAACTTCGTCAACGACGAACCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGCAAGGCCTTCGAGACCCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTTGCTACTACCCCCGAACAACTCACCCAACTCTACGATTCCATCTTCGAGCAGTTCGATTGTGATAAAAGCGGTACTGTTGATGCCGAAGAGTTCCGTACGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCGGAGCTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAGCTCGGCCAATCGTCCACCTGA

Protein sequence

MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDRSFLKQAADLEASKLGQSST

Homology

[Close]

BLAST of IVF0006055 vs. ExPASy Swiss-Prot
Match: Q99828 (Calcium and integrin-binding protein 1 OS=Homo sapiens OX=9606 GN=CIB1 PE=1 SV=4)

HSP 1 Score: 45.1 bits (105), Expect = 7.9e-04
Identity = 23/68 (33.82%), Postives = 37/68 (54.41%), Query Frame = 0


Query: 28  AFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSG 87
           AF   D ++DG L+R +L +    L    T  G D   +  ++ QL D+I E+ D D+ G
Sbjct: 111 AFRIFDFDDDGTLNREDLSRLVNCL----TGEGEDTRLSASEMKQLIDNILEESDIDRDG 170

Query: 88  TVDAEEFR 96
           T++  EF+
Sbjct: 171 TINLSEFQ 174

[Close]

BLAST of IVF0006055 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 143
           GDRSFLKQAADLEASKLGQSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of IVF0006055 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 143
           GDRSFLKQAADLEASKLGQSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of IVF0006055 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.5e-69
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 143
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of IVF0006055 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSS 142
           GD+SFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of IVF0006055 vs. ExPASy TrEMBL
Match: A0A6J1F6Q4 (uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC111441377 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 6.4e-65
Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFE+FDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSS 142
           GD+SFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of IVF0006055 vs. NCBI nr
Match: XP_008461751.1 (PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo] >KAA0052807.1 Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK04161.1 Calcium-binding EF-hand [Cucumis melo var. makuwa])

HSP 1 Score: 276 bits (707), Expect = 1.42e-93
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 142
           GDRSFLKQAADLEASKLGQSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of IVF0006055 vs. NCBI nr
Match: XP_004153292.1 (uncharacterized protein LOC101213961 [Cucumis sativus])

HSP 1 Score: 268 bits (685), Expect = 3.23e-90
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 142
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of IVF0006055 vs. NCBI nr
Match: KAE8650949.1 (hypothetical protein Csa_002692 [Cucumis sativus])

HSP 1 Score: 268 bits (685), Expect = 2.75e-89
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 64  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 123

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 124 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 183

Query: 121 GDRSFLKQAADLEASKLGQSST 142
           GD+SFLKQAADLEASKL QSST
Sbjct: 184 GDQSFLKQAADLEASKLRQSST 205

[Close]

BLAST of IVF0006055 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida])

HSP 1 Score: 262 bits (669), Expect = 8.89e-88
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KSID+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSIDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV TTPEQLTQLYDSIFEQFDCDKSGTVDA+EFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVTTTPEQLTQLYDSIFEQFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 142
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLAQSST 142

[Close]

BLAST of IVF0006055 vs. NCBI nr
Match: XP_023526874.1 (uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258 bits (659), Expect = 2.98e-86
Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           MAVVVIDGSTVRNFVNDE HF KS+D+AFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 121 GDRSFLKQAADLEASKLGQSS 141
           GD+SFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of IVF0006055 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 203.0 bits (515), Expect = 1.6e-52
Identity = 101/142 (71.13%), Postives = 123/142 (86.62%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M VV+IDGSTVR+FV+DE  F KS+D+ FA+LDLN DGVLSRSELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120
           VDV T  ++LT LYDSIFE+FD D+SG+VD EEFR+EMK I+LAIADGLGS PI M LDD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 GDRSFLKQAADLEASKLGQSST 143
            D +FLK+AADLEASKL ++S+
Sbjct: 121 DDDNFLKKAADLEASKLEKASS 142

[Close]

BLAST of IVF0006055 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 34/119 (28.57%), Postives = 58/119 (48.74%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           + V ++DG+ ++ F+ DE  F    ++ F  LD  + G L +SE+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALD 120
           V++   P     + D I ++ D D    +   +F   ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]

BLAST of IVF0006055 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.9e-09
Identity = 45/140 (32.14%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60
           M   VI   T+  F++D   F    +D F  LDL+ +G+LS SELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMAL-D 120
                  ++   +Y++IFE+F  D    +  + FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 120

Query: 121 DGDRSFLKQAADLEASKLGQ 140
           DG    L   A L  SK G+
Sbjct: 121 DG----LIMKAVLHESKQGK 127

[Close]

BLAST of IVF0006055 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-08
Identity = 36/118 (30.51%), Postives = 55/118 (46.61%), Query Frame = 0


Query: 5   VIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVA 64
           V+DGS +   V +E  F+K ++  F  LD + DG LS +EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 65  TTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGD 123
            T      +Y  +  +F       V   EF+  + +ILL +A GL   PI +   DG+
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

The following BLAST results are available for this feature:

BLAST of IVF0006055 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99828	7.9e-04	33.82	Calcium and integrin-binding protein 1 OS=Homo sapiens OX=9606 GN=CIB1 PE=1 SV=4	[more]

BLAST of IVF0006055 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UE76	2.7e-71	100.00	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGR2	2.7e-71	100.00	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]
A0A0A0L9X6	9.5e-69	97.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
A0A6J1J7W5	2.2e-65	92.91	uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160...	[more]
A0A6J1F6Q4	6.4e-65	92.20	uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]

BLAST of IVF0006055 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461751.1	1.42e-93	100.00	PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo] >KAA0052807.1 Cal...	[more]
XP_004153292.1	3.23e-90	97.18	uncharacterized protein LOC101213961 [Cucumis sativus]	[more]
KAE8650949.1	2.75e-89	97.18	hypothetical protein Csa_002692 [Cucumis sativus]	[more]
XP_038905172.1	8.89e-88	94.37	uncharacterized protein LOC120091281 [Benincasa hispida]	[more]
XP_023526874.1	2.98e-86	93.62	uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0006055 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	1.6e-52	71.13	Calcium-binding EF-hand family protein	[more]
AT5G28830.1	1.3e-09	28.57	calcium-binding EF hand family protein	[more]
AT1G54530.1	2.9e-09	32.14	Calcium-binding EF hand family protein	[more]
AT4G38810.2	1.1e-08	30.51	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.0056 score: 25.9 coord: 73..101 e-value: 0.011 score: 24.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 25..98 e-value: 3.0E-11 score: 43.6
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 10.691735
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 69..104 score: 11.110167
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 25..99 e-value: 1.58353E-8 score: 46.3869
None	No IPR available	GENE3D	1.10.238.10		coord: 9..104 e-value: 3.9E-15 score: 58.0
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..139
None	No IPR available	PANTHER	PTHR34574:SF5	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 1..139
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 82..94
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 25..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006055.2	IVF0006055.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding