Homology
BLAST of IVF0006035 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 8.3e-44
Identity = 197/816 (24.14%), Postives = 352/816 (43.14%), Query Frame = 0
Query: 185 IYGPAKRKNRPLFWEE-LENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTF 244
IY P N P F E L ++ ++ T I+ GDFN + S+K S + N+
Sbjct: 113 IYAP--NHNAPQFIRETLTDMSNLISSTSIVVGDFNTPLAVLDRSSKKKLSKEILDLNST 172
Query: 245 ISNCNLID------PPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRT 304
I + +L D P T F S A T S++D L H N+ +++
Sbjct: 173 IQHLDLTDIYRTFHPNKTEYTFFSS---AHGTYSKIDHIL--GHKSNLSKFKKIEIIPCI 232
Query: 305 TSDHFPIVLE--------SSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAAG 364
SDH I +E + T +W + + ++ D K+ +F N +Q
Sbjct: 233 FSDHHGIKVELNNNRNLHTHTKTWKLNNLMLKDTWVIDEIKKEITKFLEQNNNQD---TN 292
Query: 365 FEN-QSLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALK-ADLSQITLT 424
++N K + +A++K+ + + G ++ +E+ K + +IT
Sbjct: 293 YQNLWDTAKAVLRGKFIALQAFLKKTEREEVNNLMGHLKQLEKEEHSNPKPSRRKEITKI 352
Query: 425 EAQIWAQKCKRIWVHEGDENSSFFHKI----------CTARQKKCLISKIINNSGQNCLN 484
A++ + KRI S FF KI ++ K LIS I N + + +
Sbjct: 353 RAELNEIENKRIIQQINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEITTD 412
Query: 485 DSDIADAFIQHFEEIYTDNRNSHLFIDN-LDWC---PISNTNSDLLDKPFNEAEIWLTLK 544
S+I ++++++Y+ + ID L+ C +S ++L++P + +EI T++
Sbjct: 413 PSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQ 472
Query: 545 SFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENC 604
+ K K+PGPDG+T +F Q + + ++F++ + E ITLI K
Sbjct: 473 NLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKD 532
Query: 605 ET-VADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKG-------RKITEAI 664
T ++RPISL K++ K L +R++Q + I Q+ F+ G RK I
Sbjct: 533 PTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVI 592
Query: 665 LIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCISSV 724
N+ K + ++ +D EKAFD + F+ L K + K+I + S
Sbjct: 593 QHINKL------KNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKP 652
Query: 725 QYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVNF-SPN 784
+I++NG G RQG PLSP +F + M+ L+ + +++ I G++ S
Sbjct: 653 TANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIR---EEKAIKGIHIGSEE 712
Query: 785 LNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAKS 844
+ L+ LFADD+++++E+ D + L ++ + + SG IN KS F K+
Sbjct: 713 IKLS--LFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKT 772
Query: 845 IADSWGISKGHLPTSYLGMPL--GGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITL 904
+ DS + YLG+ L K ++ + ++I + ++ WK S GRI +
Sbjct: 773 VKDSIPFTVVPKKMKYLGVYLTKDVKDLYKENYETLRKEIAEDVNKWKNIPCSWLGRINI 832
Query: 905 IN-STLESLPYISN-----VPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEK 951
+ S L Y N P + +E +F+WN I + + +
Sbjct: 833 VKMSILPKAIYNFNAIPIKAPLSYFKDLEKIILHFIWN-----QKKPQIAKTLLSNKNKA 892
BLAST of IVF0006035 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 171.8 bits (434), Expect = 5.1e-41
Identity = 189/811 (23.30%), Postives = 337/811 (41.55%), Query Frame = 0
Query: 185 IYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFI 244
IY P R + L LK+ P I+ GDFN ++ S K + + +
Sbjct: 121 IYAPNARA-ATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVM 180
Query: 245 SNCNLID-----PPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTS 304
+L D P T +S T S++D + H + +++ S
Sbjct: 181 KQMDLTDIYRTFYPKTKGYTFFS--APHGTFSKIDHII--GHKTGLNRYKNIEIVPCILS 240
Query: 305 DHFPI-VLESSTISWGPSPF--RFTNAYLKDPDYKKNI-----EFWWGNTSQPGYAAGFE 364
DH + ++ ++ I+ G F + N L D K+ I +F N ++ A +
Sbjct: 241 DHHGLRLIFNNNINNGKPTFTWKLNNTLLNDTLVKEGIKKEIKDFLEFNENE---ATTYP 300
Query: 365 NQ-------------SLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALK 424
N +L KK + A + + ++K EA S R++ I L+
Sbjct: 301 NLWDTMKAFLRGKLIALSASKKKRETAHTSSLTTHLKALEKKEA-NSPKRSRRQEIIKLR 360
Query: 425 ADLSQITLTEAQIWAQKCKRIWVHEG-DENSSFFHKICTARQKKCLISKIINNSGQNCLN 484
+++Q+ T I R W E ++ ++ + K LI+KI N G +
Sbjct: 361 GEINQVE-TRRTIQRINQTRSWFFEKINKIDKPLARLTKGHRDKILINKIRNEKGDITTD 420
Query: 485 DSDIADAFIQHFEEIYTDNRNS----HLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLK 544
+I + ++ +Y+ + F+D ++ D L+ P + EI +
Sbjct: 421 PEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVIN 480
Query: 545 SFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVN---ETLITLIAKK 604
S K+PGPDG++ +F Q +F + I + K FH + N E ITLI K
Sbjct: 481 SLPTKKSPGPDGFSAEFYQ---TFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKP 540
Query: 605 ENCET-VADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIAN 664
+ T + +FRPISL K++ K LA+R+++ + I Q+ F+ G + I +
Sbjct: 541 QKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSI 600
Query: 665 EALDFWRNKKERG-FVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCISSVQYS 724
+ + K++ +I LD EKAFDK+ F+ VL + + MI + S +
Sbjct: 601 NVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVAN 660
Query: 725 ILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVNFSPNLNLT 784
I +NG I G RQG PLSP++F + ++ L+R + +++I G+ +
Sbjct: 661 IKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIR---QQKEIKGIQIGKE-EVK 720
Query: 785 HILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAKSIADS 844
L ADD+++++ D + L +++ F G IN +KS F K I ++
Sbjct: 721 ISLLADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRET 780
Query: 845 WGISKGHLPTSYLGMPLGG--KPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITLIN-S 904
S YLG+ L K + ++ ++I++ L WK S GRI ++ +
Sbjct: 781 TPFSIVTNNIKYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMA 840
Query: 905 TLESLPYISN-----VPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEKGGLG 951
L Y N +P ++E + F+WN SL++ + GG+
Sbjct: 841 ILPKAIYRFNAIPIKIPTQFFNELEGAICKFVWNNKKPRIAKSLLK-----DKRTSGGIT 900
BLAST of IVF0006035 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 1.8e-38
Identity = 197/822 (23.97%), Postives = 350/822 (42.58%), Query Frame = 0
Query: 176 NGASWWLSAIYGPAKRKNRPLFWEEL----ENLKSICFPTWILGGDFNVIRWKEETSTKN 235
+G ++ L +Y P R F+E L E + S I+GGDFN + +
Sbjct: 100 SGRTYNLMNVYAPTTGPERARFFESLSAYMETIDS--DEALIIGGDFNYTLDARDRNVPK 159
Query: 236 PASLSMKRFNTFISNCNLID-----PPLTNAKFTWSNLR-AQATLSRLDRFLFSTHWENI 295
S I++ +L+D P T A FT+ +R + SR+DR S+H +
Sbjct: 160 KRDSSESVLRELIAHFSLVDVWREQNPETVA-FTYVRVRDGHVSQSRIDRIYISSHL--M 219
Query: 296 FPGHTSKVLTRTTSDHFPIVLESSTISWGPSP--FRFTNAYLKDPDYKKNIEFWWGN--- 355
+S + SDH + L S P + F N+ L+D + K++ W
Sbjct: 220 SRAQSSTIRLAPFSDHNCVSLRMSIAPSLPKAAYWHFNNSLLEDEGFAKSVRDTWRGWRA 279
Query: 356 ------TSQPGYAAGFEN-----QSLGKRKKGKNEASKKAWIKEI-DLIDKLEAEGSATE 415
T + G + Q K G+ A +A E+ DL +L GS +
Sbjct: 280 FQDEFATLNQWWDVGKVHLKLLCQEYTKSVSGQRNAEIEALNGEVLDLEQRL--SGSEDQ 339
Query: 416 IHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKII 475
+ + + K L + +A+ + + + + D S FF+ + + + I+ +
Sbjct: 340 ALQCEYLERKEALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITCLF 399
Query: 476 NNSGQNCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNL-DWCP-ISNTNSDLLDKPFNEA 535
G + I D ++ +++ + S + L D P +S + L+ P
Sbjct: 400 AEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPVVSERRKERLETPITLD 459
Query: 536 EIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITL 595
E+ L+ NK+PG DG T++F Q W + + + + + +++L
Sbjct: 460 ELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSL 519
Query: 596 IAKKENCETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGRKITEAIL 655
+ KK + + ++RP+SL + YK++AKA++ RLK L + I Q V GR I + +
Sbjct: 520 LPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVF 579
Query: 656 IANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCISSVQ 715
+ + L F R + LD EKAFD+++ +++ L ++ ++ + + +S +
Sbjct: 580 LIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAE 639
Query: 716 YSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVNFSPNLN 775
+ IN + RG+RQG PLS ++ LA++ LL KR V P++
Sbjct: 640 CLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLLR----KRLTGLVLKEPDMR 699
Query: 776 LTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKST-IFPINVPTDRAKSI 835
+ +ADD+++ +D D + + ++ +AS IN SKS+ + ++ D
Sbjct: 700 VVLSAYADDVILVAQDLVD-LERAQECQEVYAAASSARINWSKSSGLLEGSLKVDFLPPA 759
Query: 836 ADSWGISKGHLPTSYLGMPLGGK--PSSSNFWDNVLQKIQKKLSSWK--YSQLSKGGRIT 895
IS YLG+ L + P S NF + + + + +L WK LS GR
Sbjct: 760 FRD--ISWESKIIKYLGVYLSAEEYPVSQNFIE-LEECVLTRLGKWKGFAKVLSMRGRAL 819
Query: 896 LINSTLES-----LPYISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEK 955
+IN + S L +S + IA KI+ +FLW G H +S P ++
Sbjct: 820 VINQLVASQIWYRLICLSPTQEFIA-KIQRRLLDFLWIGK---HWVSA---GVSSLPLKE 879
Query: 956 GGLGIHSVNSTNFALLCKWLWKFL-TEKDPLWKRLIISKYDQ 958
GG G+ + S + + ++L + P W L S Y Q
Sbjct: 880 GGQGVVCIRSQVHTFRLQQIQRYLYADPSPQWCTLASSFYRQ 899
BLAST of IVF0006035 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 6.8e-38
Identity = 185/788 (23.48%), Postives = 331/788 (42.01%), Query Frame = 0
Query: 213 ILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNLIDPPLT----NAKFTWSNLRAQA 272
++ GDFN + ST+ + + N+ + +LID T + ++T+ +
Sbjct: 141 LIMGDFNTPLSILDRSTRQKVNKDTQELNSALHQTDLIDIYRTLHPKSTEYTFFS-APHH 200
Query: 273 TLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLE--------SSTISWGPSPFRF 332
T S++D + S + ++++T SDH I LE S + +W +
Sbjct: 201 TYSKIDHIVGSK--ALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNL-L 260
Query: 333 TNAYLKDPDYKKNIEFWW-----GNTSQPGYAAGFENQSLGK-----RKKGKNEASK--- 392
N Y + K I+ ++ +T+ F+ GK K K E SK
Sbjct: 261 LNDYWVHNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDT 320
Query: 393 -KAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKC--KRIWVHEG 452
+ +KE++ ++ ++ S R++ ++A+L +I E Q QK R W E
Sbjct: 321 LTSQLKELEKQEQTHSKAS----RRQEITKIRAELKEI---ETQKTLQKINESRSWFFER 380
Query: 453 -DENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDN----RNS 512
++ ++ +++K I I N+ G + ++I ++++ +Y +
Sbjct: 381 INKIDRPLARLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEM 440
Query: 513 HLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMK 572
F+D ++ + L++P +EI + S K+PGPDG+T +F Q+ +
Sbjct: 441 DTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELV 500
Query: 573 QNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVAD-FRPISLTTAIYKLIAKALAD 632
+ +F+ + E I LI K T + FRPISL K++ K LA+
Sbjct: 501 PFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 560
Query: 633 RLKQTLPDTISESQMAFVKG-------RKITEAILIANEALDFWRNKKERGFVIKLDIEK 692
R++Q + I Q+ F+ G RK I N A K + +I +D EK
Sbjct: 561 RIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRA------KDKNHVIISIDAEK 620
Query: 693 AFDKLNWRFIDFVLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPL 752
AFDK+ F+ L K + K+I + +I++NG+ G RQG PL
Sbjct: 621 AFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPL 680
Query: 753 SPFIFVLAMDYLSRLLNNLADKRKINGVNFSPNLNLTHILFADDILIFVEDRDDYVSNLK 812
SP +F + ++ L+R + +++I G+ + LFADD+++++E+ NL
Sbjct: 681 SPLLFNIVLEVLARAIR---QEKEIKGIQLGKE-EVKLSLFADDMIVYLENPIVSAQNLL 740
Query: 813 MILHLFESASGLNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPL--GGKP 872
++ F SG IN+ KS F N I + YLG+ L K
Sbjct: 741 KLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKD 800
Query: 873 SSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITLIN-STLESLPYISN-----VPKGIAQK 932
+ +L++I++ + WK S GRI ++ + L + Y N +P +
Sbjct: 801 LFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTE 860
Query: 933 IEASWRNFLWNGTSNGHNISLIRWNQIVSPKEK-GGLGIHSVNSTNFALLCKWLWKFLTE 950
+E + F+WN I+ I+S K K GG+ + A + K W +
Sbjct: 861 LEKTTLKFIWN--QKRARIA----KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQN 901
BLAST of IVF0006035 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 1.0e-33
Identity = 96/385 (24.94%), Postives = 171/385 (44.42%), Query Frame = 0
Query: 823 MPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITLINSTLESLPYISN----VPK 882
MP+ K + + + +L+++ ++S W+ LS GR+TL + L S+P S +P+
Sbjct: 1 MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60
Query: 883 GIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEKGGLGIHSVNSTNFALLCKWLWK 942
I +++ R FLW T+ L++W+++ SPK++GGLG+ + S N AL+ K W+
Sbjct: 61 SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120
Query: 943 FLTEKDPLWKRLIISKYDQEKMGRFPSRGKFSSNNSPWKAVT----ECISWFYKNISWKV 1002
L EK+ LW ++ KY ++ S +S W+++ + +S + W
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVS---HGVGWIP 180
Query: 1003 NDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVKDFWNPSSNDWHLHINRPLRDHE 1062
DG+ I FW D W PL L + + KD W P W P +
Sbjct: 181 GDGQQIRFWTDRWVSGKPL-LELDNGERPTDCDTVVAKDLWIP-GRGWDFAKIDPYTTNN 240
Query: 1063 KNLWHNIKASLPTPLPNRGLPKPLWKLNSNNIFDTASVKRILSEAPISPANFHPNLYKTL 1122
L ++A + L + WK + + F S +L+ + N + + L
Sbjct: 241 TRL--ELRA-VVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNM-ASFFNCL 300
Query: 1123 WKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWALSPNWCYMCNKSQEDINHLFIHCPY 1182
WKV P++ K F+W + + + T + +R + N C +C E + H+ CP
Sbjct: 301 WKVRVPERVKTFLWLVGNQAVMTEEERHRR---HLSASNVCQVCKGGVESMLHVLRDCPA 360
Query: 1183 SQQLWSK-----------AKALLKW 1189
+W + +K+L +W
Sbjct: 361 QLGIWVRVVPQRRQQGFFSKSLFEW 373
BLAST of IVF0006035 vs. ExPASy TrEMBL
Match:
A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)
HSP 1 Score: 2190.2 bits (5674), Expect = 0.0e+00
Identity = 1054/1144 (92.13%), Postives = 1084/1144 (94.76%), Query Frame = 0
Query: 150 NDRMISILNGPPNVGAFSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICF 209
ND+ SIL+ GAFSVSIQVGSNNGA WWLSAIYGPAKRKNRPLFWEELE+LKSIC
Sbjct: 3 NDQNFSILS--VFKGAFSVSIQVGSNNGAFWWLSAIYGPAKRKNRPLFWEELEHLKSICL 62
Query: 210 PTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQAT 269
PTWILGGDFNVIRWKEET+TKNPA LSM+RFN+FISNCNLIDPPL+NAK+TWSNLRAQAT
Sbjct: 63 PTWILGGDFNVIRWKEETTTKNPALLSMRRFNSFISNCNLIDPPLSNAKYTWSNLRAQAT 122
Query: 270 LSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPD 329
LSRLDRFLF++ WENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPD
Sbjct: 123 LSRLDRFLFTSQWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPD 182
Query: 330 YKKNIEFWWGNTSQPGYAA----------GFENQSLGKRKKGKNEASKKAWIKEIDLIDK 389
YKKNIEFWWGNTSQPGYA ++ G+ KKGKNEASKKA IKEID IDK
Sbjct: 183 YKKNIEFWWGNTSQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDK 242
Query: 390 LEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQ 449
LEAEGSATEIHREKR ALKADLSQI LTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQ
Sbjct: 243 LEAEGSATEIHREKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQ 302
Query: 450 KKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSDLL 509
KKCLISKIINNSGQNCLNDSDIADAFIQHFE+IYTDNRNS LFI+NLDWCPISN NS+LL
Sbjct: 303 KKCLISKIINNSGQNCLNDSDIADAFIQHFEDIYTDNRNSQLFIENLDWCPISNINSELL 362
Query: 510 DKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVV 569
DKPFNEAEIWLTLKSFAKNKAPGPDGY MDFLQKSWSFMKQNICDIFKDFHSTH INKVV
Sbjct: 363 DKPFNEAEIWLTLKSFAKNKAPGPDGYAMDFLQKSWSFMKQNICDIFKDFHSTHIINKVV 422
Query: 570 NETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGR 629
NETLITLIAKKE+CET ADFRPISLTTAIYKLIAK LADRLKQTLPDTISESQMAFVKGR
Sbjct: 423 NETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTLPDTISESQMAFVKGR 482
Query: 630 KITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIA 689
+ITEAILIANEALDFWR+KKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIA
Sbjct: 483 QITEAILIANEALDFWRSKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIA 542
Query: 690 SCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGV 749
SCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGV
Sbjct: 543 SCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGV 602
Query: 750 NFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPT 809
FSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPT
Sbjct: 603 KFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPT 662
Query: 810 DRAKSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGR 869
DRAKSIADSWGISKGHLPTSYLGMPLGG+PSSSNFWDNVLQKIQKKLS+WKYSQLSKGGR
Sbjct: 663 DRAKSIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKIQKKLSNWKYSQLSKGGR 722
Query: 870 ITLINSTLESLPY----ISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKE 929
ITLINSTLESLP + VPKGIAQKIEASWRNFLWNG SNGHNISLIRWNQIVSPKE
Sbjct: 723 ITLINSTLESLPIYQMSVFKVPKGIAQKIEASWRNFLWNGASNGHNISLIRWNQIVSPKE 782
Query: 930 KGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDQEKMGRFPSRGKFSSNNSP 989
KGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYD+EKMG FPS GKFSSNNSP
Sbjct: 783 KGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDKEKMGSFPSHGKFSSNNSP 842
Query: 990 WKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVKDFW 1049
WKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVK+FW
Sbjct: 843 WKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVKEFW 902
Query: 1050 NPSSNDWHLHINRPLRDHEKNLWHNIKASLPTPLPNRGLPKPLWKLNSNNIFDTASVKRI 1109
NPSSNDWHLHINRPLRDHE+NLWHNIKASLPTPLPNRG PKPLW LNSNNIFDTASVKR
Sbjct: 903 NPSSNDWHLHINRPLRDHEENLWHNIKASLPTPLPNRGHPKPLWNLNSNNIFDTASVKRA 962
Query: 1110 LSEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWALSPNWC 1169
++EAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNW LSPNWC
Sbjct: 963 IAEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWTLSPNWC 1022
Query: 1170 YMCNKSQEDINHLFIHCPYSQQLWSKAKALLKWNRTPTDVQSLVQNICSLNIRNQKGLIT 1229
YMCNKSQEDINHLFIHCPYSQQLWSKAKALL WN TPTDVQSL+QNICSLNIRNQKGLIT
Sbjct: 1023 YMCNKSQEDINHLFIHCPYSQQLWSKAKALLNWNSTPTDVQSLIQNICSLNIRNQKGLIT 1082
Query: 1230 FNTSATLLWKIWLERNNRIFKQQGKDSQDLWEDILAQTGLWSCKSKLFSNYDCCSIALNI 1280
FNT+AT+LWKIWLERNNRIFKQQ K QDLWED LAQ GLWSCKSKLFSNYDCCSIALNI
Sbjct: 1083 FNTNATILWKIWLERNNRIFKQQEKAPQDLWEDTLAQIGLWSCKSKLFSNYDCCSIALNI 1142
BLAST of IVF0006035 vs. ExPASy TrEMBL
Match:
A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1)
HSP 1 Score: 1924.4 bits (4984), Expect = 0.0e+00
Identity = 918/1032 (88.95%), Postives = 960/1032 (93.02%), Query Frame = 0
Query: 263 NLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTN 322
NLRAQATLSRLDRFLFS WEN FPGHTSK LTRTTSDHFPIVLESS+ISWGP PFRFTN
Sbjct: 6 NLRAQATLSRLDRFLFSPQWENTFPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTN 65
Query: 323 AYLKDPDYKKNIEFWWGNTSQPGYAA----------GFENQSLGKRKKGKNEASKKAWIK 382
AYLKDPDYK+NIEFWWGNTSQPG+A + ++ GK KKGK+E SKKAWIK
Sbjct: 66 AYLKDPDYKRNIEFWWGNTSQPGFAGYSFMRRLKQLAMKIKAWGKEKKGKDEVSKKAWIK 125
Query: 383 EIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFH 442
EI+LIDKLEAEG+ATEIHR KR+ALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFH
Sbjct: 126 EINLIDKLEAEGTATEIHRVKRLALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFH 185
Query: 443 KICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPIS 502
KICTARQKKCLISK+INN GQNCLNDSDI DAFIQHFEEIYTDN+NS LFIDNLDWCPIS
Sbjct: 186 KICTARQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNLDWCPIS 245
Query: 503 NTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHST 562
NTN LLDKPFNE+EIWLTLKSF KNKAPGPDG+TMDFLQKSWSFMK NICDIFKDFHS
Sbjct: 246 NTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSN 305
Query: 563 HTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQ 622
HTINKVVNETLITLIAKK+NCETV+DFRPISLTTAIYKLIAK LADRLKQTLP TISE Q
Sbjct: 306 HTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTLPYTISELQ 365
Query: 623 MAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQ 682
MAFVKGR+ITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYS
Sbjct: 366 MAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSP 425
Query: 683 KWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLAD 742
KWR MIASCISSVQYSILINGRPRGRIKP+RGIRQGDPLSPFIFVLAMDYLS LL NLA+
Sbjct: 426 KWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYLSHLLINLAE 485
Query: 743 KRKINGVNFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTI 802
K KINGVNF PNLNLTHILFADDILIFVED++DYVSNLKMILHLFESASGLNINLSKSTI
Sbjct: 486 KGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTI 545
Query: 803 FPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYS 862
FPINVPTDRA SI DSWGISKG LPT+YLGMPLGGKPSSSNFWDN+LQKIQKKLSSWKYS
Sbjct: 546 FPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLSSWKYS 605
Query: 863 QLSKGGRITLINSTLESLPY----ISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWN 922
QLSKGGRITLINSTLESLP + VPKGIAQKIEA WRNFLWNGTSNGHNISLIRWN
Sbjct: 606 QLSKGGRITLINSTLESLPIYQLSVFKVPKGIAQKIEAYWRNFLWNGTSNGHNISLIRWN 665
Query: 923 QIVSPKEKGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDQEKMGRFPSRGK 982
Q+VSPKEKGGLGIHSV+STNFALLCKWLWKFLTEK+PLWKRLIISKYDQEKMGRFPSRGK
Sbjct: 666 QVVSPKEKGGLGIHSVHSTNFALLCKWLWKFLTEKEPLWKRLIISKYDQEKMGRFPSRGK 725
Query: 983 FSSNNSPWKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKK 1042
+SSNNSPWKAVT CISWFYKNI WKVNDGEDISFWLDNWNGN+PLSL VPRLFALSTNKK
Sbjct: 726 YSSNNSPWKAVTNCISWFYKNIGWKVNDGEDISFWLDNWNGNSPLSLVVPRLFALSTNKK 785
Query: 1043 GSVKDFWNPSSNDWHLHINRPLRDHEKNLWHNIKASLPTPLPNRGLPKPLWKLNSNNIFD 1102
GSVKD WNPS DW++H+NRPLRDHEKNLWHNIKASLPTPLP+RG KPLWKLNSNNIFD
Sbjct: 786 GSVKDLWNPSLKDWNIHVNRPLRDHEKNLWHNIKASLPTPLPDRGPSKPLWKLNSNNIFD 845
Query: 1103 TASVKRILSEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNW 1162
TAS+K+ LSEA SP NFHP+LYKTLWKV+FPKKCKFFIWTLIHGCINTADRLQKRLPNW
Sbjct: 846 TASIKKDLSEASASPTNFHPSLYKTLWKVDFPKKCKFFIWTLIHGCINTADRLQKRLPNW 905
Query: 1163 ALSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAKALLKWNRTPTDVQSLVQNICSLNIR 1222
LSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKA+ALLKWN TP DV+SL QNICSLNI+
Sbjct: 906 TLSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAQALLKWNSTPNDVKSLAQNICSLNIK 965
Query: 1223 NQKGLITFNTSATLLWKIWLERNNRIFKQQGKDSQDLWEDILAQTGLWSCKSKLFSNYDC 1281
QKGLITFNT A LLWKIWLERNNRIFKQQ K+ QDLWEDILAQTGLWSCKSKLFSNYDC
Sbjct: 966 TQKGLITFNTIAILLWKIWLERNNRIFKQQKKEFQDLWEDILAQTGLWSCKSKLFSNYDC 1025
BLAST of IVF0006035 vs. ExPASy TrEMBL
Match:
A0A5A7TR15 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003050 PE=4 SV=1)
HSP 1 Score: 1760.3 bits (4558), Expect = 0.0e+00
Identity = 837/929 (90.10%), Postives = 875/929 (94.19%), Query Frame = 0
Query: 356 GKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQK 415
GK KKGK+E SKKAWIKEIDLIDKLEAEG+ATEIHR+KR+ALKADLSQITLT+AQ+WAQK
Sbjct: 15 GKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQITLTKAQMWAQK 74
Query: 416 CKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTD 475
CKRIWVHEGDENSSFFHKICT RQKKCLISK+INN GQNCLNDSDI DAFIQHFEEIYTD
Sbjct: 75 CKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTD 134
Query: 476 NRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSW 535
N+NS LFIDN DWCPISNTN LLDKPFNE+EIWLTLKSF KNKAPGPDG+TMDFLQKSW
Sbjct: 135 NKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSW 194
Query: 536 SFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLIAKA 595
SFMK NICDIFKDFHS HTINKVVNETLITLIAKK NCETV+DF+PISLTTAIYKLIAK
Sbjct: 195 SFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLTTAIYKLIAKV 254
Query: 596 LADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIEKAFDK 655
LADRLKQTLPDTISE QMAFVKGR+ITEAILIANEALDFWRNKKERGFVIKLDIEKAFDK
Sbjct: 255 LADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDK 314
Query: 656 LNWRFIDFVLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFI 715
LNWRFIDF+LMKKNYS KWR MIASCISSVQYSILINGRPRGRIKP+RGIRQGDPLS FI
Sbjct: 315 LNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSSFI 374
Query: 716 FVLAMDYLSRLLNNLADKRKINGVNFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILH 775
FVLAMDYLS LL NLA+K KINGVNF PNLNLTHILFADDILIFVED++DYVSNLKMILH
Sbjct: 375 FVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILH 434
Query: 776 LFESASGLNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGKPSSSNFW 835
LFESASGLNINLSKSTIFPINVPTDRA SI DSWGISKG LPT+YLGMPLGGKPSSSNFW
Sbjct: 435 LFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFW 494
Query: 836 DNVLQKIQKKLSSWKYSQLSKGGRITLINSTLESLPY----ISNVPKGIAQKIEASWRNF 895
DN+LQKIQKKLSSWKYSQLSKGGRITLINSTLESLP + VPKGIAQKIEA WRNF
Sbjct: 495 DNILQKIQKKLSSWKYSQLSKGGRITLINSTLESLPIYQLSVFKVPKGIAQKIEAYWRNF 554
Query: 896 LWNGTSNGHNISLIRWNQIVSPKEKGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLI 955
LWNGTSNGHNISLIRWNQ+VSPKEKGGLGIH V+STNFALLCKWLWKFLTEK+PLWKRLI
Sbjct: 555 LWNGTSNGHNISLIRWNQVVSPKEKGGLGIHFVHSTNFALLCKWLWKFLTEKEPLWKRLI 614
Query: 956 ISKYDQEKMGRFPSRGKFSSNNSPWKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNA 1015
ISKYDQEKMGRFPSRGK+SSNNSPWKAVT CISWFYKNI WKVNDGEDISFWLDNWNGN+
Sbjct: 615 ISKYDQEKMGRFPSRGKYSSNNSPWKAVTNCISWFYKNIGWKVNDGEDISFWLDNWNGNS 674
Query: 1016 PLSLAVPRLFALSTNKKGSVKDFWNPSSNDWHLHINRPLRDHEKNLWHNIKASLPTPLPN 1075
PLSLAVPRLFALSTNKKGSVKD WNPS DW++H+NRPLRDHEKNLWHNIKASLPTPLP+
Sbjct: 675 PLSLAVPRLFALSTNKKGSVKDLWNPSLKDWNIHVNRPLRDHEKNLWHNIKASLPTPLPD 734
Query: 1076 RGLPKPLWKLNSNNIFDTASVKRILSEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLI 1135
RG KPLWKLNSNNIFDTAS+K+ LSEA SP NFHP+LYKTLWKV+FPKKCKFFIWTLI
Sbjct: 735 RGPSKPLWKLNSNNIFDTASIKKDLSEASASPTNFHPSLYKTLWKVDFPKKCKFFIWTLI 794
Query: 1136 HGCINTADRLQKRLPNWALSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAKALLKWNRT 1195
HGCINTADRLQKRLPNW LSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKA+ALLKWN T
Sbjct: 795 HGCINTADRLQKRLPNWTLSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAQALLKWNST 854
Query: 1196 PTDVQSLVQNICSLNIRNQKGLITFNTSATLLWKIWLERNNRIFKQQGKDSQDLWEDILA 1255
P DV+SL QNICSLNI+ QKGLITFNT A LLWKIWLERNNRIFKQQ K+ QDLWEDILA
Sbjct: 855 PNDVKSLAQNICSLNIKTQKGLITFNTIAILLWKIWLERNNRIFKQQKKEFQDLWEDILA 914
Query: 1256 QTGLWSCKSKLFSNYDCCSIALNISAFVK 1281
QTGLWSCKSKLFSNYDCCSIALNISAFVK
Sbjct: 915 QTGLWSCKSKLFSNYDCCSIALNISAFVK 943
BLAST of IVF0006035 vs. ExPASy TrEMBL
Match:
A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1)
HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 701/767 (91.40%), Postives = 719/767 (93.74%), Query Frame = 0
Query: 164 GAFSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRW 223
G FSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRW
Sbjct: 15 GNFSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRW 74
Query: 224 KEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWE 283
KEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFST WE
Sbjct: 75 KEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTQWE 134
Query: 284 NIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQ 343
NIFPGHTSKVLTRTTSDHFPIVLESS+ISWGPSPFRFTNAYLKDPDYK+NIEFWWGNTSQ
Sbjct: 135 NIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDYKRNIEFWWGNTSQ 194
Query: 344 PGYAA----------GFENQSLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREK 403
PG+A + ++ G+ KKGK+EASKKAWIKEIDLI+KLEAEG++TEIHREK
Sbjct: 195 PGFAGYSFMHRLKQLAMKIKAWGREKKGKDEASKKAWIKEIDLINKLEAEGTSTEIHREK 254
Query: 404 RIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQ 463
RIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIIN GQ
Sbjct: 255 RIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINICGQ 314
Query: 464 NCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLK 523
NCLNDSDI DAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNS LLDKPFNEAEIWLTLK
Sbjct: 315 NCLNDSDIVDAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSGLLDKPFNEAEIWLTLK 374
Query: 524 SFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENC 583
SFAKNKAPGPDG+TMDFLQKSWSFMKQNICDIFKDFHS HTINKVVNETLIT IAKKENC
Sbjct: 375 SFAKNKAPGPDGFTMDFLQKSWSFMKQNICDIFKDFHSNHTINKVVNETLITFIAKKENC 434
Query: 584 ETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALD 643
ETVADFRPISLTTAIYKLIAK LADRLKQTLPDTISESQMAFVKGR+ITEAILIANEALD
Sbjct: 435 ETVADFRPISLTTAIYKLIAKVLADRLKQTLPDTISESQMAFVKGRQITEAILIANEALD 494
Query: 644 FWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCISSVQYSILING 703
WRNKKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYSQKWRKMIASCISSVQYSILING
Sbjct: 495 LWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSQKWRKMIASCISSVQYSILING 554
Query: 704 RPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVNFSPNLNLTHILFA 763
RPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADK KINGVNF PNLNLTHILFA
Sbjct: 555 RPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKGKINGVNFGPNLNLTHILFA 614
Query: 764 DDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAKSIADSWGISK 823
DDILIFVED+DDYVSNLKMILHLFESASGLNINLSKSTIFPINVP DRA SIADSWGISK
Sbjct: 615 DDILIFVEDKDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPADRANSIADSWGISK 674
Query: 824 GHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITLINSTLESLPY- 883
GHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKG RITLINSTLESLP
Sbjct: 675 GHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGRRITLINSTLESLPIY 734
Query: 884 ---ISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEK 917
+ VPKGIAQKIEA WRNFLWNGTSNGHNIS ++ K K
Sbjct: 735 QLSVFKVPKGIAQKIEAYWRNFLWNGTSNGHNISSSDGTKLSPQKRK 781
BLAST of IVF0006035 vs. ExPASy TrEMBL
Match:
A0A5D3E0F6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001830 PE=4 SV=1)
HSP 1 Score: 1331.2 bits (3444), Expect = 0.0e+00
Identity = 663/683 (97.07%), Postives = 667/683 (97.66%), Query Frame = 0
Query: 1 MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETPQTSRQKDKEKIDPNEFELVVDLGHIS 60
MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETPQTSRQKDKEKIDPNEFELVVDLGHIS
Sbjct: 56 MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETPQTSRQKDKEKIDPNEFELVVDLGHIS 115
Query: 61 PLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEV 120
PLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEV
Sbjct: 116 PLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEV 175
Query: 121 SFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASW 180
SFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASW
Sbjct: 176 SFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASW 235
Query: 181 WLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRF 240
WLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRF
Sbjct: 236 WLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRF 295
Query: 241 NTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSD 300
NTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSD
Sbjct: 296 NTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSD 355
Query: 301 HFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAA----------GF 360
HFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYA
Sbjct: 356 HFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMHRLKQLAL 415
Query: 361 ENQSLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQ 420
+ ++ G+ KKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQ
Sbjct: 416 KIKAWGREKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQ 475
Query: 421 IWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFE 480
IWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFE
Sbjct: 476 IWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFE 535
Query: 481 EIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDF 540
EIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDF
Sbjct: 536 EIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDF 595
Query: 541 LQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYK 600
LQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYK
Sbjct: 596 LQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYK 655
Query: 601 LIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIE 660
LIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIE
Sbjct: 656 LIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIE 715
Query: 661 KAFDKLNWRFIDFVLMKKNYSQK 674
KAFDKLNWRFIDFVLMKKNYSQK
Sbjct: 716 KAFDKLNWRFIDFVLMKKNYSQK 738
BLAST of IVF0006035 vs. NCBI nr
Match:
KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 2179 bits (5646), Expect = 0.0
Identity = 1055/1144 (92.22%), Postives = 1084/1144 (94.76%), Query Frame = 0
Query: 150 NDRMISILNGPPNVGAFSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICF 209
ND+ SIL+ GAFSVSIQVGSNNGA WWLSAIYGPAKRKNRPLFWEELE+LKSIC
Sbjct: 3 NDQNFSILS--VFKGAFSVSIQVGSNNGAFWWLSAIYGPAKRKNRPLFWEELEHLKSICL 62
Query: 210 PTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQAT 269
PTWILGGDFNVIRWKEET+TKNPA LSM+RFN+FISNCNLIDPPL+NAK+TWSNLRAQAT
Sbjct: 63 PTWILGGDFNVIRWKEETTTKNPALLSMRRFNSFISNCNLIDPPLSNAKYTWSNLRAQAT 122
Query: 270 LSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPD 329
LSRLDRFLF++ WENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPD
Sbjct: 123 LSRLDRFLFTSQWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPD 182
Query: 330 YKKNIEFWWGNTSQPGYAAGFENQSL----------GKRKKGKNEASKKAWIKEIDLIDK 389
YKKNIEFWWGNTSQPGYA + L G+ KKGKNEASKKA IKEID IDK
Sbjct: 183 YKKNIEFWWGNTSQPGYAGYSFMRRLKQLALIIKTWGRDKKGKNEASKKACIKEIDQIDK 242
Query: 390 LEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQ 449
LEAEGSATEIHREKR ALKADLSQI LTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQ
Sbjct: 243 LEAEGSATEIHREKRTALKADLSQINLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQ 302
Query: 450 KKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSDLL 509
KKCLISKIINNSGQNCLNDSDIADAFIQHFE+IYTDNRNS LFI+NLDWCPISN NS+LL
Sbjct: 303 KKCLISKIINNSGQNCLNDSDIADAFIQHFEDIYTDNRNSQLFIENLDWCPISNINSELL 362
Query: 510 DKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVV 569
DKPFNEAEIWLTLKSFAKNKAPGPDGY MDFLQKSWSFMKQNICDIFKDFHSTH INKVV
Sbjct: 363 DKPFNEAEIWLTLKSFAKNKAPGPDGYAMDFLQKSWSFMKQNICDIFKDFHSTHIINKVV 422
Query: 570 NETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGR 629
NETLITLIAKKE+CET ADFRPISLTTAIYKLIAK LADRLKQTLPDTISESQMAFVKGR
Sbjct: 423 NETLITLIAKKEHCETAADFRPISLTTAIYKLIAKTLADRLKQTLPDTISESQMAFVKGR 482
Query: 630 KITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIA 689
+ITEAILIANEALDFWR+KKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIA
Sbjct: 483 QITEAILIANEALDFWRSKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIA 542
Query: 690 SCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGV 749
SCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGV
Sbjct: 543 SCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGV 602
Query: 750 NFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPT 809
FSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPT
Sbjct: 603 KFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPT 662
Query: 810 DRAKSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGR 869
DRAKSIADSWGISKGHLPTSYLGMPLGG+PSSSNFWDNVLQKIQKKLS+WKYSQLSKGGR
Sbjct: 663 DRAKSIADSWGISKGHLPTSYLGMPLGGRPSSSNFWDNVLQKIQKKLSNWKYSQLSKGGR 722
Query: 870 ITLINSTLESLPY----ISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKE 929
ITLINSTLESLP + VPKGIAQKIEASWRNFLWNG SNGHNISLIRWNQIVSPKE
Sbjct: 723 ITLINSTLESLPIYQMSVFKVPKGIAQKIEASWRNFLWNGASNGHNISLIRWNQIVSPKE 782
Query: 930 KGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDQEKMGRFPSRGKFSSNNSP 989
KGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYD+EKMG FPS GKFSSNNSP
Sbjct: 783 KGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDKEKMGSFPSHGKFSSNNSP 842
Query: 990 WKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVKDFW 1049
WKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVK+FW
Sbjct: 843 WKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVKEFW 902
Query: 1050 NPSSNDWHLHINRPLRDHEKNLWHNIKASLPTPLPNRGLPKPLWKLNSNNIFDTASVKRI 1109
NPSSNDWHLHINRPLRDHE+NLWHNIKASLPTPLPNRG PKPLW LNSNNIFDTASVKR
Sbjct: 903 NPSSNDWHLHINRPLRDHEENLWHNIKASLPTPLPNRGHPKPLWNLNSNNIFDTASVKRA 962
Query: 1110 LSEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWALSPNWC 1169
++EAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNW LSPNWC
Sbjct: 963 IAEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWTLSPNWC 1022
Query: 1170 YMCNKSQEDINHLFIHCPYSQQLWSKAKALLKWNRTPTDVQSLVQNICSLNIRNQKGLIT 1229
YMCNKSQEDINHLFIHCPYSQQLWSKAKALL WN TPTDVQSL+QNICSLNIRNQKGLIT
Sbjct: 1023 YMCNKSQEDINHLFIHCPYSQQLWSKAKALLNWNSTPTDVQSLIQNICSLNIRNQKGLIT 1082
Query: 1230 FNTSATLLWKIWLERNNRIFKQQGKDSQDLWEDILAQTGLWSCKSKLFSNYDCCSIALNI 1279
FNT+AT+LWKIWLERNNRIFKQQ K QDLWED LAQ GLWSCKSKLFSNYDCCSIALNI
Sbjct: 1083 FNTNATILWKIWLERNNRIFKQQEKAPQDLWEDTLAQIGLWSCKSKLFSNYDCCSIALNI 1142
BLAST of IVF0006035 vs. NCBI nr
Match:
KAA0041397.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1916 bits (4964), Expect = 0.0
Identity = 918/1032 (88.95%), Postives = 960/1032 (93.02%), Query Frame = 0
Query: 263 NLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTN 322
NLRAQATLSRLDRFLFS WEN FPGHTSK LTRTTSDHFPIVLESS+ISWGP PFRFTN
Sbjct: 6 NLRAQATLSRLDRFLFSPQWENTFPGHTSKTLTRTTSDHFPIVLESSSISWGPPPFRFTN 65
Query: 323 AYLKDPDYKKNIEFWWGNTSQPGYAA----------GFENQSLGKRKKGKNEASKKAWIK 382
AYLKDPDYK+NIEFWWGNTSQPG+A + ++ GK KKGK+E SKKAWIK
Sbjct: 66 AYLKDPDYKRNIEFWWGNTSQPGFAGYSFMRRLKQLAMKIKAWGKEKKGKDEVSKKAWIK 125
Query: 383 EIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFH 442
EI+LIDKLEAEG+ATEIHR KR+ALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFH
Sbjct: 126 EINLIDKLEAEGTATEIHRVKRLALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFH 185
Query: 443 KICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPIS 502
KICTARQKKCLISK+INN GQNCLNDSDI DAFIQHFEEIYTDN+NS LFIDNLDWCPIS
Sbjct: 186 KICTARQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEIYTDNKNSQLFIDNLDWCPIS 245
Query: 503 NTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHST 562
NTN LLDKPFNE+EIWLTLKSF KNKAPGPDG+TMDFLQKSWSFMK NICDIFKDFHS
Sbjct: 246 NTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQKSWSFMKHNICDIFKDFHSN 305
Query: 563 HTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQ 622
HTINKVVNETLITLIAKK+NCETV+DFRPISLTTAIYKLIAK LADRLKQTLP TISE Q
Sbjct: 306 HTINKVVNETLITLIAKKDNCETVSDFRPISLTTAIYKLIAKVLADRLKQTLPYTISELQ 365
Query: 623 MAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQ 682
MAFVKGR+ITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYS
Sbjct: 366 MAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSP 425
Query: 683 KWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLAD 742
KWR MIASCISSVQYSILINGRPRGRIKP+RGIRQGDPLSPFIFVLAMDYLS LL NLA+
Sbjct: 426 KWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLSPFIFVLAMDYLSHLLINLAE 485
Query: 743 KRKINGVNFSPNLNLTHILFADDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTI 802
K KINGVNF PNLNLTHILFADDILIFVED++DYVSNLKMILHLFESASGLNINLSKSTI
Sbjct: 486 KGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFESASGLNINLSKSTI 545
Query: 803 FPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYS 862
FPINVPTDRA SI DSWGISKG LPT+YLGMPLGGKPSSSNFWDN+LQKIQKKLSSWKYS
Sbjct: 546 FPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNILQKIQKKLSSWKYS 605
Query: 863 QLSKGGRITLINSTLESLPY----ISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWN 922
QLSKGGRITLINSTLESLP + VPKGIAQKIEA WRNFLWNGTSNGHNISLIRWN
Sbjct: 606 QLSKGGRITLINSTLESLPIYQLSVFKVPKGIAQKIEAYWRNFLWNGTSNGHNISLIRWN 665
Query: 923 QIVSPKEKGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDQEKMGRFPSRGK 982
Q+VSPKEKGGLGIHSV+STNFALLCKWLWKFLTEK+PLWKRLIISKYDQEKMGRFPSRGK
Sbjct: 666 QVVSPKEKGGLGIHSVHSTNFALLCKWLWKFLTEKEPLWKRLIISKYDQEKMGRFPSRGK 725
Query: 983 FSSNNSPWKAVTECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKK 1042
+SSNNSPWKAVT CISWFYKNI WKVNDGEDISFWLDNWNGN+PLSL VPRLFALSTNKK
Sbjct: 726 YSSNNSPWKAVTNCISWFYKNIGWKVNDGEDISFWLDNWNGNSPLSLVVPRLFALSTNKK 785
Query: 1043 GSVKDFWNPSSNDWHLHINRPLRDHEKNLWHNIKASLPTPLPNRGLPKPLWKLNSNNIFD 1102
GSVKD WNPS DW++H+NRPLRDHEKNLWHNIKASLPTPLP+RG KPLWKLNSNNIFD
Sbjct: 786 GSVKDLWNPSLKDWNIHVNRPLRDHEKNLWHNIKASLPTPLPDRGPSKPLWKLNSNNIFD 845
Query: 1103 TASVKRILSEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNW 1162
TAS+K+ LSEA SP NFHP+LYKTLWKV+FPKKCKFFIWTLIHGCINTADRLQKRLPNW
Sbjct: 846 TASIKKDLSEASASPTNFHPSLYKTLWKVDFPKKCKFFIWTLIHGCINTADRLQKRLPNW 905
Query: 1163 ALSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAKALLKWNRTPTDVQSLVQNICSLNIR 1222
LSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKA+ALLKWN TP DV+SL QNICSLNI+
Sbjct: 906 TLSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAQALLKWNSTPNDVKSLAQNICSLNIK 965
Query: 1223 NQKGLITFNTSATLLWKIWLERNNRIFKQQGKDSQDLWEDILAQTGLWSCKSKLFSNYDC 1280
QKGLITFNT A LLWKIWLERNNRIFKQQ K+ QDLWEDILAQTGLWSCKSKLFSNYDC
Sbjct: 966 TQKGLITFNTIAILLWKIWLERNNRIFKQQKKEFQDLWEDILAQTGLWSCKSKLFSNYDC 1025
BLAST of IVF0006035 vs. NCBI nr
Match:
KAA0044556.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1752 bits (4537), Expect = 0.0
Identity = 837/932 (89.81%), Postives = 877/932 (94.10%), Query Frame = 0
Query: 353 QSLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIW 412
++ GK KKGK+E SKKAWIKEIDLIDKLEAEG+ATEIHR+KR+ALKADLSQITLT+AQ+W
Sbjct: 12 KAWGKEKKGKDEVSKKAWIKEIDLIDKLEAEGTATEIHRDKRLALKADLSQITLTKAQMW 71
Query: 413 AQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEI 472
AQKCKRIWVHEGDENSSFFHKICT RQKKCLISK+INN GQNCLNDSDI DAFIQHFEEI
Sbjct: 72 AQKCKRIWVHEGDENSSFFHKICTTRQKKCLISKVINNCGQNCLNDSDIVDAFIQHFEEI 131
Query: 473 YTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQ 532
YTDN+NS LFIDN DWCPISNTN LLDKPFNE+EIWLTLKSF KNKAPGPDG+TMDFLQ
Sbjct: 132 YTDNKNSQLFIDNRDWCPISNTNRCLLDKPFNESEIWLTLKSFTKNKAPGPDGFTMDFLQ 191
Query: 533 KSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLI 592
KSWSFMK NICDIFKDFHS HTINKVVNETLITLIAKK NCETV+DF+PISLTTAIYKLI
Sbjct: 192 KSWSFMKHNICDIFKDFHSNHTINKVVNETLITLIAKKNNCETVSDFQPISLTTAIYKLI 251
Query: 593 AKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIEKA 652
AK LADRLKQTLPDTISE QMAFVKGR+ITEAILIANEALDFWRNKKERGFVIKLDIEKA
Sbjct: 252 AKVLADRLKQTLPDTISELQMAFVKGRQITEAILIANEALDFWRNKKERGFVIKLDIEKA 311
Query: 653 FDKLNWRFIDFVLMKKNYSQKWRKMIASCISSVQYSILINGRPRGRIKPSRGIRQGDPLS 712
FDKLNWRFIDF+LMKKNYS KWR MIASCISSVQYSILINGRPRGRIKP+RGIRQGDPLS
Sbjct: 312 FDKLNWRFIDFMLMKKNYSPKWRNMIASCISSVQYSILINGRPRGRIKPTRGIRQGDPLS 371
Query: 713 PFIFVLAMDYLSRLLNNLADKRKINGVNFSPNLNLTHILFADDILIFVEDRDDYVSNLKM 772
FIFVLAMDYLS LL NLA+K KINGVNF PNLNLTHILFADDILIFVED++DYVSNLKM
Sbjct: 372 SFIFVLAMDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKM 431
Query: 773 ILHLFESASGLNINLSKSTIFPINVPTDRAKSIADSWGISKGHLPTSYLGMPLGGKPSSS 832
ILHLFESASGLNINLSKSTIFPINVPTDRA SI DSWGISKG LPT+YLGMPLGGKPSSS
Sbjct: 432 ILHLFESASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSS 491
Query: 833 NFWDNVLQKIQKKLSSWKYSQLSKGGRITLINSTLESLPY----ISNVPKGIAQKIEASW 892
NFWDN+LQKIQKKLSSWKYSQLSKGGRITLINSTLESLP + VPKGIAQKIEA W
Sbjct: 492 NFWDNILQKIQKKLSSWKYSQLSKGGRITLINSTLESLPIYQLSVFKVPKGIAQKIEAYW 551
Query: 893 RNFLWNGTSNGHNISLIRWNQIVSPKEKGGLGIHSVNSTNFALLCKWLWKFLTEKDPLWK 952
RNFLWNGTSNGHNISLIRWNQ+VSPKEKGGLGIH V+STNFALLCKWLWKFLTEK+PLWK
Sbjct: 552 RNFLWNGTSNGHNISLIRWNQVVSPKEKGGLGIHFVHSTNFALLCKWLWKFLTEKEPLWK 611
Query: 953 RLIISKYDQEKMGRFPSRGKFSSNNSPWKAVTECISWFYKNISWKVNDGEDISFWLDNWN 1012
RLIISKYDQEKMGRFPSRGK+SSNNSPWKAVT CISWFYKNI WKVNDGEDISFWLDNWN
Sbjct: 612 RLIISKYDQEKMGRFPSRGKYSSNNSPWKAVTNCISWFYKNIGWKVNDGEDISFWLDNWN 671
Query: 1013 GNAPLSLAVPRLFALSTNKKGSVKDFWNPSSNDWHLHINRPLRDHEKNLWHNIKASLPTP 1072
GN+PLSLAVPRLFALSTNKKGSVKD WNPS DW++H+NRPLRDHEKNLWHNIKASLPTP
Sbjct: 672 GNSPLSLAVPRLFALSTNKKGSVKDLWNPSLKDWNIHVNRPLRDHEKNLWHNIKASLPTP 731
Query: 1073 LPNRGLPKPLWKLNSNNIFDTASVKRILSEAPISPANFHPNLYKTLWKVEFPKKCKFFIW 1132
LP+RG KPLWKLNSNNIFDTAS+K+ LSEA SP NFHP+LYKTLWKV+FPKKCKFFIW
Sbjct: 732 LPDRGPSKPLWKLNSNNIFDTASIKKDLSEASASPTNFHPSLYKTLWKVDFPKKCKFFIW 791
Query: 1133 TLIHGCINTADRLQKRLPNWALSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAKALLKW 1192
TLIHGCINTADRLQKRLPNW LSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKA+ALLKW
Sbjct: 792 TLIHGCINTADRLQKRLPNWTLSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAQALLKW 851
Query: 1193 NRTPTDVQSLVQNICSLNIRNQKGLITFNTSATLLWKIWLERNNRIFKQQGKDSQDLWED 1252
N TP DV+SL QNICSLNI+ QKGLITFNT A LLWKIWLERNNRIFKQQ K+ QDLWED
Sbjct: 852 NSTPNDVKSLAQNICSLNIKTQKGLITFNTIAILLWKIWLERNNRIFKQQKKEFQDLWED 911
Query: 1253 ILAQTGLWSCKSKLFSNYDCCSIALNISAFVK 1280
ILAQTGLWSCKSKLFSNYDCCSIALNISAFVK
Sbjct: 912 ILAQTGLWSCKSKLFSNYDCCSIALNISAFVK 943
BLAST of IVF0006035 vs. NCBI nr
Match:
TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1419 bits (3674), Expect = 0.0
Identity = 701/767 (91.40%), Postives = 719/767 (93.74%), Query Frame = 0
Query: 164 GAFSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRW 223
G FSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRW
Sbjct: 15 GNFSVSIQVGSNNGASWWLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRW 74
Query: 224 KEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWE 283
KEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFST WE
Sbjct: 75 KEETSTKNPASLSMKRFNTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTQWE 134
Query: 284 NIFPGHTSKVLTRTTSDHFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQ 343
NIFPGHTSKVLTRTTSDHFPIVLESS+ISWGPSPFRFTNAYLKDPDYK+NIEFWWGNTSQ
Sbjct: 135 NIFPGHTSKVLTRTTSDHFPIVLESSSISWGPSPFRFTNAYLKDPDYKRNIEFWWGNTSQ 194
Query: 344 PGYAA----------GFENQSLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREK 403
PG+A + ++ G+ KKGK+EASKKAWIKEIDLI+KLEAEG++TEIHREK
Sbjct: 195 PGFAGYSFMHRLKQLAMKIKAWGREKKGKDEASKKAWIKEIDLINKLEAEGTSTEIHREK 254
Query: 404 RIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQ 463
RIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIIN GQ
Sbjct: 255 RIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINICGQ 314
Query: 464 NCLNDSDIADAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLK 523
NCLNDSDI DAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNS LLDKPFNEAEIWLTLK
Sbjct: 315 NCLNDSDIVDAFIQHFEEIYTDNRNSHLFIDNLDWCPISNTNSGLLDKPFNEAEIWLTLK 374
Query: 524 SFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENC 583
SFAKNKAPGPDG+TMDFLQKSWSFMKQNICDIFKDFHS HTINKVVNETLIT IAKKENC
Sbjct: 375 SFAKNKAPGPDGFTMDFLQKSWSFMKQNICDIFKDFHSNHTINKVVNETLITFIAKKENC 434
Query: 584 ETVADFRPISLTTAIYKLIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALD 643
ETVADFRPISLTTAIYKLIAK LADRLKQTLPDTISESQMAFVKGR+ITEAILIANEALD
Sbjct: 435 ETVADFRPISLTTAIYKLIAKVLADRLKQTLPDTISESQMAFVKGRQITEAILIANEALD 494
Query: 644 FWRNKKERGFVIKLDIEKAFDKLNWRFIDFVLMKKNYSQKWRKMIASCISSVQYSILING 703
WRNKKERGFVIKLDIEKAFDKLNWRFIDF+LMKKNYSQKWRKMIASCISSVQYSILING
Sbjct: 495 LWRNKKERGFVIKLDIEKAFDKLNWRFIDFMLMKKNYSQKWRKMIASCISSVQYSILING 554
Query: 704 RPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVNFSPNLNLTHILFA 763
RPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADK KINGVNF PNLNLTHILFA
Sbjct: 555 RPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKGKINGVNFGPNLNLTHILFA 614
Query: 764 DDILIFVEDRDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPTDRAKSIADSWGISK 823
DDILIFVED+DDYVSNLKMILHLFESASGLNINLSKSTIFPINVP DRA SIADSWGISK
Sbjct: 615 DDILIFVEDKDDYVSNLKMILHLFESASGLNINLSKSTIFPINVPADRANSIADSWGISK 674
Query: 824 GHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITLINSTLESLPY- 883
GHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKG RITLINSTLESLP
Sbjct: 675 GHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGRRITLINSTLESLPIY 734
Query: 884 ---ISNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEK 916
+ VPKGIAQKIEA WRNFLWNGTSNGHNIS ++ K K
Sbjct: 735 QLSVFKVPKGIAQKIEAYWRNFLWNGTSNGHNISSSDGTKLSPQKRK 781
BLAST of IVF0006035 vs. NCBI nr
Match:
TYK29577.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 1325 bits (3429), Expect = 0.0
Identity = 663/683 (97.07%), Postives = 667/683 (97.66%), Query Frame = 0
Query: 1 MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETPQTSRQKDKEKIDPNEFELVVDLGHIS 60
MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETPQTSRQKDKEKIDPNEFELVVDLGHIS
Sbjct: 56 MSYAKMEAKSKRPTQSIKKKVYRVKSRSMERETPQTSRQKDKEKIDPNEFELVVDLGHIS 115
Query: 61 PLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEV 120
PLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEV
Sbjct: 116 PLSDTDFSCPESPSYIPSPTSPTESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEV 175
Query: 121 SFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASW 180
SFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASW
Sbjct: 176 SFKRKLTDWLKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASW 235
Query: 181 WLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRF 240
WLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRF
Sbjct: 236 WLSAIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRF 295
Query: 241 NTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSD 300
NTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSD
Sbjct: 296 NTFISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSD 355
Query: 301 HFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAA----------GF 360
HFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYA
Sbjct: 356 HFPIVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMHRLKQLAL 415
Query: 361 ENQSLGKRKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQ 420
+ ++ G+ KKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQ
Sbjct: 416 KIKAWGREKKGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQ 475
Query: 421 IWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFE 480
IWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFE
Sbjct: 476 IWAQKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFE 535
Query: 481 EIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDF 540
EIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDF
Sbjct: 536 EIYTDNRNSHLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDF 595
Query: 541 LQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYK 600
LQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYK
Sbjct: 596 LQKSWSFMKQNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYK 655
Query: 601 LIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIE 660
LIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIE
Sbjct: 656 LIAKALADRLKQTLPDTISESQMAFVKGRKITEAILIANEALDFWRNKKERGFVIKLDIE 715
Query: 661 KAFDKLNWRFIDFVLMKKNYSQK 673
KAFDKLNWRFIDFVLMKKNYSQK
Sbjct: 716 KAFDKLNWRFIDFVLMKKNYSQK 738
BLAST of IVF0006035 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 114.4 bits (285), Expect = 6.8e-25
Identity = 99/404 (24.50%), Postives = 174/404 (43.07%), Query Frame = 0
Query: 213 ILGGDFNVIRWKEETSTKNPASLSMK---RFNTFISNCNLIDPPLTNAKFTWSNLRAQAT 272
IL GDF+ I + + S+ M+ F + + +L+D P +TWSN +
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNP 281
Query: 273 LSR-LDRFLFSTHWENIFPGHTSKVLTRTTSDHFP-IVLESSTISWGPSPFRFTNAYLKD 332
+ R LDR + + W + FP + SDH P I++ + FR+ +
Sbjct: 282 IIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTH 341
Query: 333 PDYKKNIEFWWGNTSQPGYAAGFENQSLGKRKKGKNEASK--------KAWIKEIDLIDK 392
P + ++ W + G SLG+ K + K K + +D
Sbjct: 342 PTFLVSLTVAW----EEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDS 401
Query: 393 LEAEGS------ATEIHREKRIALKADLSQITLTEAQIWAQKCKRIWVHEGDENSSFFHK 452
LE+ S + + R + +A K + + QK + W+ +GD N+ FFHK
Sbjct: 402 LESIQSQLLTNPSDSLFRVEHVARK-KWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 461
Query: 453 ICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNR-----NSHLFIDNLDW 512
+ A Q K LI + + N + + + + ++ + + +S I ++
Sbjct: 462 VILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHP 521
Query: 513 CPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMKQNICDIFKD 572
++T + L ++ EI + + +NKAPGPD +T +F +SW +K + K+
Sbjct: 522 FRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKE 581
Query: 573 FHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLI 593
F T + K N T ITLI K + ++ FRP+S T +YK+I
Sbjct: 582 FFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620
BLAST of IVF0006035 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 107.8 bits (268), Expect = 6.4e-23
Identity = 88/383 (22.98%), Postives = 157/383 (40.99%), Query Frame = 0
Query: 805 IADSWGISKGHLPTSYLGMPLGGKPSSSNFWDNVLQKIQKKLSSWKYSQLSKGGRITLIN 864
I S+ + G LP YLG+PL K +++ + +++KI+ ++ W LS GR+ LI+
Sbjct: 12 ILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLIS 71
Query: 865 STLESLPYI----SNVPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEKGGLG 924
S + SL +P ++I++ +FLW+G + + W+ + +PK++GGLG
Sbjct: 72 SVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLG 131
Query: 925 IHSVNSTNFALLCKWLWKFLTEKDPLWKRLIISKYDQEKMGRFPSRGKFSSNNSPWKAVT 984
I S+ N K W G + + WK +
Sbjct: 132 IRSLKEAN--------------KGSFWS----------------ISGNTTLGSWMWKKIL 191
Query: 985 ECISWFYKNISWKVNDGEDISFWLDNWNGNAPLSLAVPRLFALSTNKKGSVKDFWNPSSN 1044
+ + + +++G + SFW DNW+ + RL + T +G + ++
Sbjct: 192 KHRALASGFVKHDIHNGSNTSFWFDNWS-------KIGRLIDV-TGHRGCIDMGITLHAS 251
Query: 1045 DWHLHINRPLRDHEKNLWHNIKASLPTPLPNRGLPK----PLWKLNSNNIFDTASVKRIL 1104
+N R H + I+ + + ++GL WK N + + K
Sbjct: 252 VAEAVVNHRPRRHRHDTLLRIE-DVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKE-- 311
Query: 1105 SEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNW-ALSPNWC 1164
+ A N YK +W K W I + T DR+ +W A + + C
Sbjct: 312 TWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRML----SWNAGADSSC 349
Query: 1165 YMCNKSQEDINHLFIHCPYSQQL 1179
+C+ E +HLF CPYS ++
Sbjct: 372 VLCHHLVETRDHLFFTCPYSAEV 349
BLAST of IVF0006035 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 104.4 bits (259), Expect = 7.0e-22
Identity = 91/419 (21.72%), Postives = 165/419 (39.38%), Query Frame = 0
Query: 876 VPKGIAQKIEASWRNFLWNGTSNGHNISLIRWNQIVSPKEKGGLGIHSVNSTNFALLCKW 935
+PK + ++I + +F W + W+ + K +GG+G + + N ALL K
Sbjct: 13 LPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQ 72
Query: 936 LWKFLTEKDPLWKRLIISKYDQEKMGRFPSRGKFSSNNS-PWKAVTECISWFYKNISWKV 995
+W+ L+ + L ++ S+Y + P S S WK++ + V
Sbjct: 73 MWRMLSRPESLMAKVFKSRYFHKS---DPLNAPLGSRPSFVWKSIHASQEILRQGARAVV 132
Query: 996 NDGEDISFWLDNWNGNAPLSLA-----VPRLFALSTNKKGSVKDFWNPSSNDWHLHINRP 1055
+GEDI W W + P S A VP S + V D + S +W +
Sbjct: 133 GNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEM 192
Query: 1056 L-RDHEKNLWHNIKASLPTPLPNRGLPKPLWKLNSNNIFDTAS--------VKRILSEAP 1115
L + E+ L ++ P R L W S+ + S + + S
Sbjct: 193 LFPEVERKLIGELR-----PGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQE 252
Query: 1116 ISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWALSPNWCYMCNK 1175
+S + +P +Y+ +WK + K + F+W + + A L R + C C
Sbjct: 253 VSEPSLNP-IYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYR---HLSKESACIRCPS 312
Query: 1176 SQEDINHLFIHCPYSQQLWSKAKALLKWNRTPTDVQSLVQN---ICSLNIRNQKGLITFN 1235
+E +NHL C +++ W+ + + D S+ N + +L N +
Sbjct: 313 CKETVNHLLFKCTFARLTWAISSIPIPLGGEWAD--SIYVNLYWVFNLGNGNPQWEKASQ 372
Query: 1236 TSATLLWKIWLERNNRIFKQQGKDSQDL-------WEDILAQTGLWSCKSKLFSNYDCC 1270
LLW++W RN +F+ + ++Q++ E+ +T SC +K N C
Sbjct: 373 LVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSC 417
BLAST of IVF0006035 vs. TAIR 10
Match:
AT2G02650.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 71.6 bits (174), Expect = 5.1e-12
Identity = 38/151 (25.17%), Postives = 71/151 (47.02%), Query Frame = 0
Query: 1090 ASVKRILSEAPISPANFHPNLYKTLWKVEFPKKCKFFIWTLIHGCINTADRLQKRLPNWA 1149
A+ + +L E I P + + +WK+ K K F+W + G + T RL+ R N
Sbjct: 13 ATHEDLLEEEAIQPPPGSTEVKQAIWKLHVAPKIKHFLWRCVTGALATNTRLRSR--NID 72
Query: 1150 LSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAKALL--KWNRTPTDVQSLVQNICSLNI 1209
P C C +E I+H+ +CPY+Q +W A ++ +W P+ + + + L+
Sbjct: 73 ADP-ICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWG-PPSSFEDNLNRLIQLSK 132
Query: 1210 RNQKGLITFNTSATLLWKIWLERNNRIFKQQ 1239
+ ++W++W RN +F+Q+
Sbjct: 133 TQTTNSLDRFLPFWIMWRLWKSRNVFLFQQK 159
BLAST of IVF0006035 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 70.9 bits (172), Expect = 8.6e-12
Identity = 31/67 (46.27%), Postives = 46/67 (68.66%), Query Frame = 0
Query: 690 LINGRPRGRIKPSRGIRQGDPLSPFIFVLAMDYLSRLLNNLADKRKINGVNFSPNL-NLT 749
+ING P+G + PSRG+RQGDPLSP++F+L + LS L ++ ++ G+ S N +
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 750 HILFADD 756
H+LFADD
Sbjct: 73 HLLFADD 79
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P08548 | 8.3e-44 | 24.14 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
P11369 | 5.1e-41 | 23.30 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P14381 | 1.8e-38 | 23.97 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
O00370 | 6.8e-38 | 23.48 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P0C2F6 | 1.0e-33 | 24.94 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7T9I7 | 0.0e+00 | 92.13 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TIB8 | 0.0e+00 | 88.95 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TR15 | 0.0e+00 | 90.10 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BJP3 | 0.0e+00 | 91.40 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3E0F6 | 0.0e+00 | 97.07 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
KAA0039950.1 | 0.0 | 92.22 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245... | [more] |
KAA0041397.1 | 0.0 | 88.95 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0044556.1 | 0.0 | 89.81 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYJ99326.1 | 0.0 | 91.40 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
TYK29577.1 | 0.0 | 97.07 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 6.8e-25 | 24.50 | DNAse I-like superfamily protein | [more] |
AT3G24255.1 | 6.4e-23 | 22.98 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT4G29090.1 | 7.0e-22 | 21.72 | Ribonuclease H-like superfamily protein | [more] |
AT2G02650.1 | 5.1e-12 | 25.17 | Ribonuclease H-like superfamily protein | [more] |
ATMG01250.1 | 8.6e-12 | 46.27 | RNA-directed DNA polymerase (reverse transcriptase) | [more] |