IVF0005882 (gene) Melon (IVF77) v1

Overview


Name	IVF0005882
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Tesmin/TSO1-like CXC domain-containing protein
Location	chr07: 23710918 .. 23713183 (+)
RNA-Seq Expression	IVF0005882
Synteny	IVF0005882

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAGGTGATTTTATGATTCTTTACTTTAGATGTTTTAATCAGAACCCACTTTAGATTTAAATTTTCCTTTAAAGTTGGAGGTGAGAAAAAAAATCATAAACTAGCTATCATGATTTAAGTTTATAATTAGGTTTTTATCTTTATGGTAAATTTTGGGTTCTCAGCAACAATAGAGAAGCTGGAATTGGTGATGATCACTTCGACTTGAGCAATTTCCACGAGACTCCAGTTCTTTTTGCTGATCCGACTATCGAGGTGATTAAATTAAATACTTTAATTAATTAAATTAATCACAAATTTATCCATACTATAATTACATTTAGTACTAAATTTTAAATTAGCTCTTTCACATATTGCAGATAAATAGCGATATTGGATATCAAAACTGGAATGATGAGGTTCGATACTTAAATTTTCAGAGCAATGTGGAAATTGAAAATCTTAATAATATGGTAAGGAGTAATTAATTAATTCATTCATTCATTATATATAATATTGTTTAATCGAAAATGTGTTTTTTTTCCTGTATATCAGTGTATTTTTATGGTGCAGGAAATGGTGTCTGTAGGTGTTTCCGCTAATGAGATAAACAATGACGGCACTAGTGGTAGCACCAAAAGAAAGAGGTTAAATTTTCTCTTTTTCTTACTTATTTAGTTATTTATTTTTGGAAAAAAAAAACATTTACTGATTTTAATAAATGGGTAGCTAAATTGTAAGAATTGATATTTTTCAGTTAAAAATCACTTCTGATCGTATGTAACAATTTAATTTCTACTGTAGAAATTAGTATAATAGTTTAATGAGATTGCTGACCTAAATCATTTGATAAACTAATTAGACACAAATATTTTTACAAAATACAAATACTCCCTCGCATAACATAATAGAAGAACTAATTTTGATGAATTTTTTAACTTAGAGAATTAAATTGTTGCACATAAGAACTAAATTTGTAAAATTATTCACAAAAAATATATCAAAATTTTTACAACTTTTTAAGTTTTATTTTACTATATTTTGTAAATAGTTTTTTTTTTTCTAAAAATCATAATTGTTCTTAATATAATACGTTTGAATAATTAACGTTAACGTTGAGGTGGTGTTCAATTTATGTACAGGAAGAAATCAACCGTGGAAAATAAGAGGAAATCCAGCCCAGGTGGTTGCAAATGCAAAAACAGCAAGTGCATAAAACTGTAAGTTAACTAAAACATTATACATATAATATAATTAAGTATGAAGATAACTATTATACATTACAAAATATTAACGATATTTATTGAATAAAAAATGCAGATATTGCGACTGCTTTGCGAGTGAAATGTTTTGCGACGAAAACTGTGGGTGTGTGTAGAATGCCTCAACAAAGTTCTGTACGTAGACACTGTTGTTGCTGCTAAAAAAAAACTTAGAACCAAGAAACCCTCGGCCTTTGATAGAGAAAATGTAATACAATTAATTTAATTTCTTACTAACTATCTATCTATCAATATATATATATATATATACACGATCTCAACATCATGTAATAAATTTGTGAATAAATAGGTAGGAGAGTCATCTACAGAAAGAAAAGGATGCAACTGCAAGAACTCATCGTGTAAAAGAATTATTGTAAATGCTTTCAGGTACTTCCCGTTCCAAATCATTAAAGATCTGTTTAGTATAGAATTCCTATTACTGTGTCATTTTACAATCCTAGAGACCAAATTTGTAACTTGATCATAATTATTATTTTGCATTATGATATGATTTATAGTACTATATGTATTCAATATAATTATGTTTTTTAAAATATAAAATTTGAACTCTAGATACGACGAAAACTTGAATTATCTATCAAATGCATATTTGTTAAATTCAGTGAATCTGAAAATATTAAAACATAATTTGGTATAAACCCCTAAACCTTTTTCTTACAAGAAAATAAATCAAAATTTAATATTATTTTTCTTTGTGTCAAATTAAATTAAACAATTATATAATATATGTATATATATCGTAAATAATGAAATTCAATATTGTTTTAATTTATATTTACAGGCAGGAGTTGCTTGCACGGAAGCATGTAATTGTCAAGGTTGTCAAAATCCTTGCGGCACAGCCTGTGCAGGTAATTTGAATAGCAGTATTGTTTTACATGAAATCGTCAAAAATGACAAATTTACTGTACGTTATAAATATTTAATTTATTTTATTATATTTAAAAATGTTCATTGTTTTATTTTTTTTAAGGGTTTTAAGTTTAATTTTTTATAA

mRNA sequence

ATGACGAGCAACAATAGAGAAGCTGGAATTGGTGATGATCACTTCGACTTGAGCAATTTCCACGAGACTCCAGTTCTTTTTGCTGATCCGACTATCGAGATAAATAGCGATATTGGATATCAAAACTGGAATGATGAGGTTCGATACTTAAATTTTCAGAGCAATGTGGAAATTGAAAATCTTAATAATATGGAAATGGTGTCTGTAGGTGTTTCCGCTAATGAGATAAACAATGACGGCACTAGTGGTAGCACCAAAAGAAAGAGGAAGAAATCAACCGTGGAAAATAAGAGGAAATCCAGCCCAGGTGGTTGCAAATGCAAAAACAGCAAGTGCATAAAACTATATTGCGACTGCTTTGCGAGTGAAATGTTTTGCGACGAAAACTTTCTGTACGTAGACACTGTTGTTGCTGCTAAAAAAAAACTTAGAACCAAGAAACCCTCGGCCTTTGATAGAGAAAATGTAGGAGAGTCATCTACAGAAAGAAAAGGATGCAACTGCAAGAACTCATCGTGTAAAAGAATTATTGCAGGAGTTGCTTGCACGGAAGCATGTAATTGTCAAGGTTGTCAAAATCCTTGCGGCACAGCCTGTGCAGGTAATTTGAATAGCAGTATTGTTTTACATGAAATCGTCAAAAATGACAAATTTACTGTACGTTATAAATATTTAATTTATTTTATTATATTTAAAAATGTTCATTGTTTTATTTTTTTTAAGGGTTTTAAGTTTAATTTTTTATAA

Coding sequence (CDS)

ATGACGAGCAACAATAGAGAAGCTGGAATTGGTGATGATCACTTCGACTTGAGCAATTTCCACGAGACTCCAGTTCTTTTTGCTGATCCGACTATCGAGATAAATAGCGATATTGGATATCAAAACTGGAATGATGAGGTTCGATACTTAAATTTTCAGAGCAATGTGGAAATTGAAAATCTTAATAATATGGAAATGGTGTCTGTAGGTGTTTCCGCTAATGAGATAAACAATGACGGCACTAGTGGTAGCACCAAAAGAAAGAGGAAGAAATCAACCGTGGAAAATAAGAGGAAATCCAGCCCAGGTGGTTGCAAATGCAAAAACAGCAAGTGCATAAAACTATATTGCGACTGCTTTGCGAGTGAAATGTTTTGCGACGAAAACTTTCTGTACGTAGACACTGTTGTTGCTGCTAAAAAAAAACTTAGAACCAAGAAACCCTCGGCCTTTGATAGAGAAAATGTAGGAGAGTCATCTACAGAAAGAAAAGGATGCAACTGCAAGAACTCATCGTGTAAAAGAATTATTGCAGGAGTTGCTTGCACGGAAGCATGTAATTGTCAAGGTTGTCAAAATCCTTGCGGCACAGCCTGTGCAGGTAATTTGAATAGCAGTATTGTTTTACATGAAATCGTCAAAAATGACAAATTTACTGTACGTTATAAATATTTAATTTATTTTATTATATTTAAAAATGTTCATTGTTTTATTTTTTTTAAGGGTTTTAAGTTTAATTTTTTATAA

Protein sequence

MTSNNREAGIGDDHFDLSNFHETPVLFADPTIEINSDIGYQNWNDEVRYLNFQSNVEIENLNNMEMVSVGVSANEINNDGTSGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDENFLYVDTVVAAKKKLRTKKPSAFDRENVGESSTERKGCNCKNSSCKRIIAGVACTEACNCQGCQNPCGTACAGNLNSSIVLHEIVKNDKFTVRYKYLIYFIIFKNVHCFIFFKGFKFNFL

Homology

[Close]

BLAST of IVF0005882 vs. ExPASy Swiss-Prot
Match: Q8L548 (Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana OX=3702 GN=TCX3 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-13
Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 0


Query: 79  DGTSGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDE---------N 138
           D T  S K+KR+KS    +  SS   C CK SKC+KLYC+CFA+  +C E          
Sbjct: 304 DLTPISPKKKRRKSEQSGEGDSSCKRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFNK 363

Query: 139 FLYVDTVVAAKKKLRTKKPSAF----------------DRENVGESSTERKGCNCKNSSC 197
            ++ D V+A +K++ ++ P AF                D      S+  ++GCNCK S+C
Sbjct: 364 PIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVGEDASKTPASARHKRGCNCKKSNC 423

[Close]

BLAST of IVF0005882 vs. ExPASy Swiss-Prot
Match: Q9LUI3 (CRC domain-containing protein TSO1 OS=Arabidopsis thaliana OX=3702 GN=TSO1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 0


Query: 83  GSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDENFLYVD-------- 142
           GS K+K +KS    + +S    C CK SKC+KLYC+CFA+ ++C E    +D        
Sbjct: 382 GSLKKKMRKSEQAGEGESCK-RCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHE 441

Query: 143 -TVVAAKKKLRTKKPSAF----------------DRENVGESSTERKGCNCKNSSCKR-- 197
            TV+A +K++ ++ P AF                D      S+  ++GCNCK S+C +  
Sbjct: 442 ETVLATRKQIESRNPLAFAPKVIRNADSIMEASDDASKTPASARHKRGCNCKKSNCMKKY 501

[Close]

BLAST of IVF0005882 vs. ExPASy Swiss-Prot
Match: F4JIF5 (Protein tesmin/TSO1-like CXC 2 OS=Arabidopsis thaliana OX=3702 GN=TCX2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.1e-12
Identity = 43/139 (30.94%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 88  KRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDE---------NFLYVDTVVA 147
           K+K+  +++    S   C CK SKC+KLYC+CFA+ ++C E           ++ D V+A
Sbjct: 360 KKKRVKLDSGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEDVVLA 419

Query: 148 AKKKLRTKKPSAF----------------DRENVGESSTERKGCNCKNSSCKR-----II 197
            +K++ ++ P AF                D      S+  ++GCNCK S+C +       
Sbjct: 420 TRKQIESRNPLAFAPKVIRNSDSVQETGDDASKTPASARHKRGCNCKKSNCLKKYCECYQ 479

[Close]

BLAST of IVF0005882 vs. ExPASy Swiss-Prot
Match: Q84JZ8 (Protein tesmin/TSO1-like CXC 4 OS=Arabidopsis thaliana OX=3702 GN=TCX4 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-11
Identity = 40/131 (30.53%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 105 CKCKNSKCIKLYCDCFASEMFCDE---------NFLYVDTVVAAKKKLRTKKPSAFDREN 164
           CKC+ S+C+KLYC+CF++ +FC E           ++ D V+ +++ ++ + P AF  + 
Sbjct: 455 CKCRKSQCLKLYCECFSAGLFCGEPCSCQNCFNKPIHEDLVMKSREVIKARNPLAFAPKV 514

Query: 165 VGESST----------------ERKGCNCKNSSCKR-----IIAGVACTEACNCQGCQNP 203
           V  S T                 ++GCNC+ S C +      + GV C+  C C GC+N 
Sbjct: 515 VSTSDTVIDLWVENSKTPASARHKRGCNCRKSGCSKKYCECFMMGVGCSSNCRCMGCKNT 574

[Close]

BLAST of IVF0005882 vs. ExPASy Swiss-Prot
Match: A1Z9E2 (Protein lin-54 homolog OS=Drosophila melanogaster OX=7227 GN=mip120 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10
Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 105 CKCKNSKCIKLYCDCFASEMFCD-----ENFLYVDTVVAAKKKLRT---KKPSAFDRE-- 164
           C C  S+C+KLYCDCFA+  FC      + F  +D  V  ++ +R+   + PSAF  +  
Sbjct: 741 CNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKIT 800

Query: 165 --NVGESSTERKGCNCKNSSCKR-----IIAGVACTEACNCQGCQN 194
             N G+     KGCNCK S C +       A + C+  C C GC+N
Sbjct: 801 APNSGDMRLHNKGCNCKRSGCLKNYCECYEAKIPCSSICKCVGCRN 846

[Close]

BLAST of IVF0005882 vs. ExPASy TrEMBL
Match: A0A0A0KVD1 (CRC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004800 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.8e-73
Identity = 155/229 (67.69%), Postives = 177/229 (77.29%), Query Frame = 0


Query: 1   MTSN-NREAGIGDDHFDLSNFHETPVLFADPT-IEINSDIGYQNWNDEVRYLNFQSNVEI 60
           MTSN NREAGIGDDH ++SNFHE+PV FADP+ IEINSDI Y NWND++ YLNFQSN EI
Sbjct: 1   MTSNDNREAGIGDDHSNMSNFHESPVFFADPSAIEINSDIEYSNWNDDIPYLNFQSNEEI 60

Query: 61  ENLNNMEMVSVGVSANEINNDG-TSGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYC 120
           +N N+ E+VS+GVS NEINNDG +SGSTKRKRKKS VEN+  SSP  C CK S+C+KLYC
Sbjct: 61  QNPNDPEVVSLGVSTNEINNDGNSSGSTKRKRKKSRVENENNSSPRRCNCKKSQCLKLYC 120

Query: 121 DCFASEMFCDE----------NFLYVDTVVAAKKKLRTKKPSAFDRENVGE-------SS 180
           +CFAS  FC+E          N  Y+DTVVAAK+KL+TKK SAFDRENV E       SS
Sbjct: 121 ECFASGAFCNEECGCGENCFNNPRYLDTVVAAKQKLKTKKSSAFDRENVREGVTTTKTSS 180

Query: 181 TERKGCNCKNSSCKR-----IIAGVACTEACNCQGCQNPCGTACAGNLN 205
           TER+GCNCKNS C++       AGVACTEACNCQGCQNPCGTAC GN N
Sbjct: 181 TERRGCNCKNSECRQKYCKCFQAGVACTEACNCQGCQNPCGTACPGNSN 229

[Close]

BLAST of IVF0005882 vs. ExPASy TrEMBL
Match: A0A1S3BY78 (protein tesmin/TSO1-like CXC 2 OS=Cucumis melo OX=3656 GN=LOC103494720 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 84/215 (39.07%), Postives = 122/215 (56.74%), Query Frame = 0


Query: 2   TSNNREAGIGDDHFDLSNFHETPVLFADPTIEINSDIGYQNWNDEVRYLNFQSNVEIENL 61
           ++ N+EA IGD+H  +SNFH+T  + A  ++E N  + Y N N +          E  N+
Sbjct: 46  SNKNKEAPIGDNHSKISNFHKTQNICAGLSVEKNDGVEYHNKNKK----------ENNNI 105

Query: 62  -NNMEMVSVGVSANEINNDGT-SGSTKRKRKKSTVENKRKSSPGGCKC--KNSKCIKLYC 121
            ++ +  S   S N++N + T + +TKRK  K+ VE+ +K+SP  C C  KN++C+ L C
Sbjct: 106 RDHQKQTSPIGSLNDMNYNSTPTTTTKRKSGKAKVEDGKKASP-CCHCANKNTECLTLDC 165

Query: 122 DCFASEMFCDENF-----------LYVDTVVAAKKKLRTKKPSAFDRENVGESSTERKGC 181
           +CFA EMFC E             LY DTV  AK+++R+  PSAFD+  V      R  C
Sbjct: 166 ECFAREMFCSEECGCDDEDCFNTPLYEDTVDVAKEQIRSINPSAFDQNIV------RGAC 225

Query: 182 NCKNSSCKRI-----IAGVACTEACNCQGCQNPCG 197
           NC  S+C++I      AG+ CTEAC+CQ C NP G
Sbjct: 226 NCHKSTCQKIDCPCLRAGLRCTEACHCQVCCNPYG 243

[Close]

BLAST of IVF0005882 vs. ExPASy TrEMBL
Match: A0A6S7NJR0 (CRC domain-containing protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS28619 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-13
Identity = 50/124 (40.32%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 104 GCKCKNSKCIKLYCDCFASEMFCDEN---------FLYVDTVVAAKKKLRTKKPSAFD-- 163
           GCKCK SKC+KLYCDCFA E +C E+           Y DTV  A++K++ + P AFD  
Sbjct: 93  GCKCKKSKCVKLYCDCFAGEFYCGEDCSCTECFNRVEYEDTVEVAREKIKVRDPLAFDPK 152

Query: 164 ---------RENVGESST------ERKGCNCKNSSCKRII-----AGVACTEACNCQGCQ 197
                      N G +         RKGC CKNS C ++      A V CT  C C+GC+
Sbjct: 153 IYPVVQSTRSHNEGGNQVMPVVGKHRKGCTCKNSMCYQLYCECYKANVGCTVGCRCEGCK 212

[Close]

BLAST of IVF0005882 vs. ExPASy TrEMBL
Match: A0A7I4ESU3 (CRC domain-containing protein OS=Physcomitrium patens OX=3218 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.9e-13
Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 84  STKRKRKKSTVENKRKSSPGGCK---CKNSKCIKLYCDCFASEMFCDENFL--------- 143
           S KR+R+KSTV ++ + S  GCK   CK SKC+KLYC+CFA+ ++C  +           
Sbjct: 761 SAKRRRRKSTVSSQSERSGDGCKRCNCKKSKCLKLYCECFAAGLYCVGSCACRDCFNKPE 820

Query: 144 YVDTVVAAKKKLRTKKPSAFDRE----------------NVGESSTERKGCNCKNSSCKR 197
           Y++TV+  ++++ ++ P AF  +                +   S+  ++GCNCK S C +
Sbjct: 821 YIETVINTRQQIESRNPLAFAPKIVQGAESSPVPGDEVLDTPASARHKRGCNCKKSLCLK 880

[Close]

BLAST of IVF0005882 vs. ExPASy TrEMBL
Match: A0A4Y7L837 (CRC domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_043392 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.8e-12
Identity = 57/174 (32.76%), Postives = 87/174 (50.00%), Query Frame = 0


Query: 72  SANEINNDGTSGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDENF- 131
           +A  I+ +   G+ K+K+     ++        C CK SKC+KLYC+CFA+ ++C E+  
Sbjct: 150 AAFRISEEFNQGNLKKKKSSRVEQDGDSEGCKNCNCKKSKCLKLYCECFAAGIYCTESCS 209

Query: 132 --------LYVDTVVAAKKKLRTKKPSAF------DRENVGE--------SSTERKGCNC 191
                    + DTV+A +K++ ++ P AF      + ++V E        S+  +KGCNC
Sbjct: 210 CLECYNIPAHEDTVLATRKQILSRNPLAFAPKVIRNSKSVAEIWEEPSEISARHKKGCNC 269

Query: 192 KNSSC-KRII----AGVACTEACNCQGCQNPCGTACAGNLNSSIVLHEIVKNDK 218
           K S C KR       GV CT  C CQGCQN  G   +  L   + LH+    +K
Sbjct: 270 KKSGCIKRYCECYQGGVGCTIGCKCQGCQNTFGRKDSECLMVVLKLHKPEAEEK 323

[Close]

BLAST of IVF0005882 vs. NCBI nr
Match: KGN52869.1 (hypothetical protein Csa_014688 [Cucumis sativus])

HSP 1 Score: 286 bits (732), Expect = 3.12e-94
Identity = 155/229 (67.69%), Postives = 177/229 (77.29%), Query Frame = 0


Query: 1   MTSN-NREAGIGDDHFDLSNFHETPVLFADPT-IEINSDIGYQNWNDEVRYLNFQSNVEI 60
           MTSN NREAGIGDDH ++SNFHE+PV FADP+ IEINSDI Y NWND++ YLNFQSN EI
Sbjct: 1   MTSNDNREAGIGDDHSNMSNFHESPVFFADPSAIEINSDIEYSNWNDDIPYLNFQSNEEI 60

Query: 61  ENLNNMEMVSVGVSANEINNDG-TSGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYC 120
           +N N+ E+VS+GVS NEINNDG +SGSTKRKRKKS VEN+  SSP  C CK S+C+KLYC
Sbjct: 61  QNPNDPEVVSLGVSTNEINNDGNSSGSTKRKRKKSRVENENNSSPRRCNCKKSQCLKLYC 120

Query: 121 DCFASEMFCDE----------NFLYVDTVVAAKKKLRTKKPSAFDRENVGE-------SS 180
           +CFAS  FC+E          N  Y+DTVVAAK+KL+TKK SAFDRENV E       SS
Sbjct: 121 ECFASGAFCNEECGCGENCFNNPRYLDTVVAAKQKLKTKKSSAFDRENVREGVTTTKTSS 180

Query: 181 TERKGCNCKNSSCKR-----IIAGVACTEACNCQGCQNPCGTACAGNLN 204
           TER+GCNCKNS C++       AGVACTEACNCQGCQNPCGTAC GN N
Sbjct: 181 TERRGCNCKNSECRQKYCKCFQAGVACTEACNCQGCQNPCGTACPGNSN 229

[Close]

BLAST of IVF0005882 vs. NCBI nr
Match: XP_038878069.1 (protein tesmin/TSO1-like CXC 2 [Benincasa hispida])

HSP 1 Score: 160 bits (406), Expect = 4.44e-44
Identity = 103/240 (42.92%), Postives = 140/240 (58.33%), Query Frame = 0


Query: 3   SNNREAGIGDDHFDLSNFHETPVLFADPTIEINSDIGYQNWNDEVRYLNFQSNVEIENLN 62
           SN+REA IG DHF++S FHET  + A+  +E N  + YQNW D+V YLNF+S  +  N N
Sbjct: 61  SNHREAAIGYDHFNMSYFHETRNICAELPVEKNEGVKYQNW-DDVPYLNFESKNKNGNPN 120

Query: 63  N---MEMVSVGVSANEINNDGTSGSTKRKRKKSTVENKRKSSPGG-CKCKNSKCIKLYCD 122
           N      +S  VS + +NN  +S   KRKR+KS VE + K   G  C C  S+C+ L C+
Sbjct: 121 NDVRNNQMSSDVSTDSVNNCSSS---KRKREKSKVEEENKPISGPRCNCTKSECLDLSCE 180

Query: 123 CFASEMFCDE---------NFLYVDTVVAAKKKLRTKKPSAFDRENVGE-----SSTERK 182
           CF S M+C E         N LY DTV   K+++ +  PSAF  + V E     SS+ER+
Sbjct: 181 CFTSGMYCGEDCGCTDCFNNRLYEDTVEVVKQQILSHNPSAFATKKVKERKTIASSSERR 240

Query: 183 GCNCKNSSCKR-----IIAGVACTEACNCQGCQNPCG----TACAGNLNSSIVLHEIVKN 215
           GCNC +S C++       AGV CTEAC+CQ CQNPCG     + AG+ + + +  E+  N
Sbjct: 241 GCNCIHSKCRKKYCPCFQAGVPCTEACHCQNCQNPCGIRPSNSVAGSSHGNSISEEMSDN 296

[Close]

BLAST of IVF0005882 vs. NCBI nr
Match: XP_008454271.1 (PREDICTED: protein tesmin/TSO1-like CXC 2 [Cucumis melo])

HSP 1 Score: 118 bits (296), Expect = 2.88e-28
Identity = 83/216 (38.43%), Postives = 122/216 (56.48%), Query Frame = 0


Query: 1   MTSNNREAGIGDDHFDLSNFHETPVLFADPTIEINSDIGYQNWNDEVRYLNFQSNVEIEN 60
            ++ N+EA IGD+H  +SNFH+T  + A  ++E N  + Y N N +          E  N
Sbjct: 45  QSNKNKEAPIGDNHSKISNFHKTQNICAGLSVEKNDGVEYHNKNKK----------ENNN 104

Query: 61  LNNMEMVSVGV-SANEINNDGT-SGSTKRKRKKSTVENKRKSSPGGCKC--KNSKCIKLY 120
           + + +  +  + S N++N + T + +TKRK  K+ VE+ +K+SP  C C  KN++C+ L 
Sbjct: 105 IRDHQKQTSPIGSLNDMNYNSTPTTTTKRKSGKAKVEDGKKASPC-CHCANKNTECLTLD 164

Query: 121 CDCFASEMFCDENF-----------LYVDTVVAAKKKLRTKKPSAFDRENVGESSTERKG 180
           C+CFA EMFC E             LY DTV  AK+++R+  PSAFD+  V      R  
Sbjct: 165 CECFAREMFCSEECGCDDEDCFNTPLYEDTVDVAKEQIRSINPSAFDQNIV------RGA 224

Query: 181 CNCKNSSCKRII-----AGVACTEACNCQGCQNPCG 196
           CNC  S+C++I      AG+ CTEAC+CQ C NP G
Sbjct: 225 CNCHKSTCQKIDCPCLRAGLRCTEACHCQVCCNPYG 243

[Close]

BLAST of IVF0005882 vs. NCBI nr
Match: CAB4101286.1 (unnamed protein product [Lactuca saligna])

HSP 1 Score: 89.4 bits (220), Expect = 1.27e-16
Identity = 50/124 (40.32%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 104 GCKCKNSKCIKLYCDCFASEMFCDENFL---------YVDTVVAAKKKLRTKKPSAFDRE 163
           GCKCK SKC+KLYCDCFA E +C E+           Y DTV  A++K++ + P AFD +
Sbjct: 93  GCKCKKSKCVKLYCDCFAGEFYCGEDCSCTECFNRVEYEDTVEVAREKIKVRDPLAFDPK 152

Query: 164 -----------NVGESST------ERKGCNCKNSSCKRII-----AGVACTEACNCQGCQ 196
                      N G +         RKGC CKNS C ++      A V CT  C C+GC+
Sbjct: 153 IYPVVQSTRSHNEGGNQVMPVVGKHRKGCTCKNSMCYQLYCECYKANVGCTVGCRCEGCK 212

[Close]

BLAST of IVF0005882 vs. NCBI nr
Match: KAF8088985.1 (hypothetical protein N665_0522s0014 [Sinapis alba])

HSP 1 Score: 89.4 bits (220), Expect = 3.33e-16
Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = 0


Query: 82  SGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDENF---------LY 141
           S S K+KR+KS    + +SS   C CK SKC+KLYC+CFA+ ++C E           ++
Sbjct: 313 SSSPKKKRRKSEQAGEGESSCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCVDCFNKPIH 372

Query: 142 VDTVVAAKKKLRTKKPSAF-------------DRENVGESSTERKGCNCKNSSCKRII-- 196
            DTV+A +K++ ++ P AF             D      S+  ++GCNCK S+C +    
Sbjct: 373 EDTVLATRKQIESRNPLAFAPKVIRNSESIIEDASKTPASARHKRGCNCKKSNCLKKYCE 432

[Close]

BLAST of IVF0005882 vs. TAIR 10
Match: AT3G22760.1 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 0


Query: 79  DGTSGSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDE---------N 138
           D T  S K+KR+KS    +  SS   C CK SKC+KLYC+CFA+  +C E          
Sbjct: 304 DLTPISPKKKRRKSEQSGEGDSSCKRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFNK 363

Query: 139 FLYVDTVVAAKKKLRTKKPSAF----------------DRENVGESSTERKGCNCKNSSC 197
            ++ D V+A +K++ ++ P AF                D      S+  ++GCNCK S+C
Sbjct: 364 PIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVGEDASKTPASARHKRGCNCKKSNC 423

[Close]

BLAST of IVF0005882 vs. TAIR 10
Match: AT3G22780.1 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13
Identity = 48/144 (33.33%), Postives = 71/144 (49.31%), Query Frame = 0


Query: 83  GSTKRKRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDENFLYVD-------- 142
           GS K+K +KS    + +S    C CK SKC+KLYC+CFA+ ++C E    +D        
Sbjct: 382 GSLKKKMRKSEQAGEGESCK-RCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHE 441

Query: 143 -TVVAAKKKLRTKKPSAF----------------DRENVGESSTERKGCNCKNSSCKR-- 197
            TV+A +K++ ++ P AF                D      S+  ++GCNCK S+C +  
Sbjct: 442 ETVLATRKQIESRNPLAFAPKVIRNADSIMEASDDASKTPASARHKRGCNCKKSNCMKKY 501

[Close]

BLAST of IVF0005882 vs. TAIR 10
Match: AT4G14770.1 (TESMIN/TSO1-like CXC 2 )

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-13
Identity = 43/139 (30.94%), Postives = 69/139 (49.64%), Query Frame = 0


Query: 88  KRKKSTVENKRKSSPGGCKCKNSKCIKLYCDCFASEMFCDE---------NFLYVDTVVA 147
           K+K+  +++    S   C CK SKC+KLYC+CFA+ ++C E           ++ D V+A
Sbjct: 360 KKKRVKLDSGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEDVVLA 419

Query: 148 AKKKLRTKKPSAF----------------DRENVGESSTERKGCNCKNSSCKR-----II 197
            +K++ ++ P AF                D      S+  ++GCNCK S+C +       
Sbjct: 420 TRKQIESRNPLAFAPKVIRNSDSVQETGDDASKTPASARHKRGCNCKKSNCLKKYCECYQ 479

[Close]

BLAST of IVF0005882 vs. TAIR 10
Match: AT3G04850.1 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-12
Identity = 40/131 (30.53%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 105 CKCKNSKCIKLYCDCFASEMFCDE---------NFLYVDTVVAAKKKLRTKKPSAFDREN 164
           CKC+ S+C+KLYC+CF++ +FC E           ++ D V+ +++ ++ + P AF  + 
Sbjct: 455 CKCRKSQCLKLYCECFSAGLFCGEPCSCQNCFNKPIHEDLVMKSREVIKARNPLAFAPKV 514

Query: 165 VGESST----------------ERKGCNCKNSSCKR-----IIAGVACTEACNCQGCQNP 203
           V  S T                 ++GCNC+ S C +      + GV C+  C C GC+N 
Sbjct: 515 VSTSDTVIDLWVENSKTPASARHKRGCNCRKSGCSKKYCECFMMGVGCSSNCRCMGCKNT 574

[Close]

BLAST of IVF0005882 vs. TAIR 10
Match: AT2G20110.2 (Tesmin/TSO1-like CXC domain-containing protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 39/118 (33.05%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 105 CKCKNSKCIKLYCDCFASEMFCD-----ENFLYVDTVVAAKKKLRT---KKPSAF----- 164
           C CK+S+C+KLYC+CFAS  +CD       F  V+   A ++ + +   + P+AF     
Sbjct: 121 CNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTLERNPNAFRPKIA 180

Query: 165 --------DRENVGE---SSTERKGCNCKNSSCKR-----IIAGVACTEACNCQGCQN 194
                   +RE VG+    +   KGC+CK S C +       A + C+E C C  C+N
Sbjct: 181 ASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKN 238

The following BLAST results are available for this feature:

BLAST of IVF0005882 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L548	1.5e-13	33.78	Protein tesmin/TSO1-like CXC 3 OS=Arabidopsis thaliana OX=3702 GN=TCX3 PE=1 SV=1	[more]
Q9LUI3	2.1e-12	33.33	CRC domain-containing protein TSO1 OS=Arabidopsis thaliana OX=3702 GN=TSO1 PE=1 ...	[more]
F4JIF5	8.1e-12	30.94	Protein tesmin/TSO1-like CXC 2 OS=Arabidopsis thaliana OX=3702 GN=TCX2 PE=1 SV=1	[more]
Q84JZ8	3.1e-11	30.53	Protein tesmin/TSO1-like CXC 4 OS=Arabidopsis thaliana OX=3702 GN=TCX4 PE=1 SV=1	[more]
A1Z9E2	4.4e-10	36.79	Protein lin-54 homolog OS=Drosophila melanogaster OX=7227 GN=mip120 PE=1 SV=1	[more]

BLAST of IVF0005882 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVD1	3.8e-73	67.69	CRC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004800 PE=3 SV...	[more]
A0A1S3BY78	1.4e-22	39.07	protein tesmin/TSO1-like CXC 2 OS=Cucumis melo OX=3656 GN=LOC103494720 PE=3 SV=1	[more]
A0A6S7NJR0	1.5e-13	40.32	CRC domain-containing protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS28619 PE=...	[more]
A0A7I4ESU3	9.9e-13	34.25	CRC domain-containing protein OS=Physcomitrium patens OX=3218 PE=3 SV=1	[more]
A0A4Y7L837	3.8e-12	32.76	CRC domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_043392 PE=3...	[more]

BLAST of IVF0005882 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN52869.1	3.12e-94	67.69	hypothetical protein Csa_014688 [Cucumis sativus]	[more]
XP_038878069.1	4.44e-44	42.92	protein tesmin/TSO1-like CXC 2 [Benincasa hispida]	[more]
XP_008454271.1	2.88e-28	38.43	PREDICTED: protein tesmin/TSO1-like CXC 2 [Cucumis melo]	[more]
CAB4101286.1	1.27e-16	40.32	unnamed protein product [Lactuca saligna]	[more]
KAF8088985.1	3.33e-16	35.92	hypothetical protein N665_0522s0014 [Sinapis alba]	[more]

BLAST of IVF0005882 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22760.1	1.0e-14	33.78	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT3G22780.1	1.5e-13	33.33	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT4G14770.1	5.8e-13	30.94	TESMIN/TSO1-like CXC 2	[more]
AT3G04850.1	2.2e-12	30.53	Tesmin/TSO1-like CXC domain-containing protein	[more]
AT2G20110.2	1.7e-09	33.05	Tesmin/TSO1-like CXC domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033467	Tesmin/TSO1-like CXC domain	SMART	SM01114	CXC_2	coord: 100..129 e-value: 3.3E-4 score: 25.9 coord: 161..197 e-value: 0.0058 score: 15.8
IPR005172	CRC domain	PFAM	PF03638	TCR	coord: 104..128 e-value: 1.3E-7 score: 31.8
IPR005172	CRC domain	PROSITE	PS51634	CRC	coord: 101..196 score: 14.430696
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..105
IPR044522	CRC domain-containing protein TSO1-like	PANTHER	PTHR46159	PROTEIN TESMIN/TSO1-LIKE CXC 2	coord: 69..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005882.2	IVF0005882.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003700	DNA-binding transcription factor activity