IVF0005875 (gene) Melon (IVF77) v1

Overview


Name	IVF0005875
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box/kelch-repeat protein SKIP25
Location	tig00001378: 313371 .. 314874 (+)
RNA-Seq Expression	IVF0005875
Synteny	IVF0005875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGTGGTAACATTAAATAATAAAGGCAATTGGAAGAGTAAGCTTTGGCTTTTGGTATCCGCCGAATAATGACTTTACGCCGTCTAATACAAGAAATGATTTATCCCCATTTTCAGATATGAACGCCGCCTCCTCCGCTGTCTCCACCGCCTGTCTTCTTCTCCACCTCCCTTCTCATGGTCACCACTGCCACCGCCGATTCCCCCACTCCCCCTTCCTCCAAGCGCAATAAACTGGCTTCCACCAACACCCCTCTTCGCCCCTCCTCCCCGGCCTCCCCGATCACGTAGCTCAATTCTGCCTCTCCCATGTCCCCCCTTCTCTCCTCTTCTCCGTAAGCCGCTCATGGCGGCGCCTCCTCTATTCCCTTCCTTTCCCCCTTTCTCCTCCCTTTACGCCCTTCTTTCTTCCTCCTCTAATTCCCTCGATTTCTTCAATTTCGATCCAATCTCTTCGAAATGGAGTCCTCTCCCTCCTCCACCGAATTCCCCTTCTTCCCATCTCTTGATCCACCACCCTTCTTTCCTCTCCCGCCACCTCCCTGTTCAATCTCTCTCTGTTTCCGGCCACCTCCTCCTCCTCGCCGCCACCACCCATAACCTCCTCCCCGCTCTCCCTCGCCCTCTCCTCTTTTCCCCCTTTTCCAATTCCTGGCGTTTAGCCCCTCCTCTCCCCACCCCTCGCCGTTGGTGCGCTGCCGGCGCTCTCCGTGGCTCTGTTTATGTCGCTAGTGGAATTGGATCTTTCTTCTCTACTGATGTAGCTAGATCTGTTGAGAGATGGGATTTGAAAGCCAACGGTGCTGGTGACTGGGAGAAGGTTAGTGGGCTTAAGGACGGAAGATTTAGTAGAGACGCCATTGATGCAGTGGGATGGAAAGGTAAACTCTGTATGGTGAATGTGAAAGGGCATGCGCTTAAAGAAGGATTGGTTTATGATTTGGAAAAGGATGAGTGGGAAGATATGCCGGAAGGGATGATCGGAGGGTGGAGAGGACCGGCGGCCGCCATGGATGAGGAAGATATGTATGTGGTGGATGAAGTAAGTGGAAGTTTGAGAAGGTATGATCCAGAGAGGGATTTTTGGGAAGACGTAATGGAATCCAATCGGCTGAAAGGGGCGGTGCAGATGGCGGCCGGCGGTGGAAGAGTGTGCGTCGTGTGCGGTGGAAGTAGAGGGGAAATAGTGGTGGTGGATGTGGTGGCGTCGCCGGCGCGGTTGTGGGTGGAGCCGACGCCGCCGGGAACAGAGGTGGTCGCCGTTCACGTGCTGCCGAGAATGAATTGGGCTGCGGACTCATGATTGGCCGCCGTTTACCGCCGGGAAGTGATTTTTCTTCCTTCCTTTCTTTTTTCTTTTTTGGATTTTTTCTTTTTAAATTAAAAATATTGTGTTATTGTTTAATATATTAATAGAAAGATAATACGGAGAATTTAATTGATTATTTATTATTATTTTTTTTTGGGGTAAGTAAAGGAAAAGTGGAAATTTGTCGGTTTAAAG

mRNA sequence

AATTGTGGTAACATTAAATAATAAAGGCAATTGGAAGAGTAAGCTTTGGCTTTTGGTATCCGCCGAATAATGACTTTACGCCGTCTAATACAAGAAATGATTTATCCCCATTTTCAGATATGAACGCCGCCTCCTCCGCTGTCTCCACCGCCTGTCTTCTTCTCCACCTCCCTTCTCATGGTCACCACTGCCACCGCCGATTCCCCCACTCCCCCTTCCTCCAAGCGCAATAAACTGGCTTCCACCAACACCCCTCTTCGCCCCTCCTCCCCGGCCTCCCCGATCACGTAGCTCAATTCTGCCTCTCCCATGTCCCCCCTTCTCTCCTCTTCTCCGTAAGCCGCTCATGGCGGCGCCTCCTCTATTCCCTTCCTTTCCCCCTTTCTCCTCCCTTTACGCCCTTCTTTCTTCCTCCTCTAATTCCCTCGATTTCTTCAATTTCGATCCAATCTCTTCGAAATGGAGTCCTCTCCCTCCTCCACCGAATTCCCCTTCTTCCCATCTCTTGATCCACCACCCTTCTTTCCTCTCCCGCCACCTCCCTGTTCAATCTCTCTCTGTTTCCGGCCACCTCCTCCTCCTCGCCGCCACCACCCATAACCTCCTCCCCGCTCTCCCTCGCCCTCTCCTCTTTTCCCCCTTTTCCAATTCCTGGCGTTTAGCCCCTCCTCTCCCCACCCCTCGCCGTTGGTGCGCTGCCGGCGCTCTCCGTGGCTCTGTTTATGTCGCTAGTGGAATTGGATCTTTCTTCTCTACTGATGTAGCTAGATCTGTTGAGAGATGGGATTTGAAAGCCAACGGTGCTGGTGACTGGGAGAAGGTTAGTGGGCTTAAGGACGGAAGATTTAGTAGAGACGCCATTGATGCAGTGGGATGGAAAGGTAAACTCTGTATGGTGAATGTGAAAGGGCATGCGCTTAAAGAAGGATTGGTTTATGATTTGGAAAAGGATGAGTGGGAAGATATGCCGGAAGGGATGATCGGAGGGTGGAGAGGACCGGCGGCCGCCATGGATGAGGAAGATATGTATGTGGTGGATGAAGTAAGTGGAAGTTTGAGAAGGTATGATCCAGAGAGGGATTTTTGGGAAGACGTAATGGAATCCAATCGGCTGAAAGGGGCGGTGCAGATGGCGGCCGGCGGTGGAAGAGTGTGCGTCGTGTGCGGTGGAAGTAGAGGGGAAATAGTGGTGGTGGATGTGGTGGCGTCGCCGGCGCGGTTGTGGGTGGAGCCGACGCCGCCGGGAACAGAGGTGGTCGCCGTTCACGTGCTGCCGAGAATGAATTGGGCTGCGGACTCATGATTGGCCGCCGTTTACCGCCGGGAAGTGATTTTTCTTCCTTCCTTTCTTTTTTCTTTTTTGGATTTTTTCTTTTTAAATTAAAAATATTGTGTTATTGTTTAATATATTAATAGAAAGATAATACGGAGAATTTAATTGATTATTTATTATTATTTTTTTTTGGGGTAAGTAAAGGAAAAGTGGAAATTTGTCGGTTTAAAG

Coding sequence (CDS)

ATGGCGGCGCCTCCTCTATTCCCTTCCTTTCCCCCTTTCTCCTCCCTTTACGCCCTTCTTTCTTCCTCCTCTAATTCCCTCGATTTCTTCAATTTCGATCCAATCTCTTCGAAATGGAGTCCTCTCCCTCCTCCACCGAATTCCCCTTCTTCCCATCTCTTGATCCACCACCCTTCTTTCCTCTCCCGCCACCTCCCTGTTCAATCTCTCTCTGTTTCCGGCCACCTCCTCCTCCTCGCCGCCACCACCCATAACCTCCTCCCCGCTCTCCCTCGCCCTCTCCTCTTTTCCCCCTTTTCCAATTCCTGGCGTTTAGCCCCTCCTCTCCCCACCCCTCGCCGTTGGTGCGCTGCCGGCGCTCTCCGTGGCTCTGTTTATGTCGCTAGTGGAATTGGATCTTTCTTCTCTACTGATGTAGCTAGATCTGTTGAGAGATGGGATTTGAAAGCCAACGGTGCTGGTGACTGGGAGAAGGTTAGTGGGCTTAAGGACGGAAGATTTAGTAGAGACGCCATTGATGCAGTGGGATGGAAAGGTAAACTCTGTATGGTGAATGTGAAAGGGCATGCGCTTAAAGAAGGATTGGTTTATGATTTGGAAAAGGATGAGTGGGAAGATATGCCGGAAGGGATGATCGGAGGGTGGAGAGGACCGGCGGCCGCCATGGATGAGGAAGATATGTATGTGGTGGATGAAGTAAGTGGAAGTTTGAGAAGGTATGATCCAGAGAGGGATTTTTGGGAAGACGTAATGGAATCCAATCGGCTGAAAGGGGCGGTGCAGATGGCGGCCGGCGGTGGAAGAGTGTGCGTCGTGTGCGGTGGAAGTAGAGGGGAAATAGTGGTGGTGGATGTGGTGGCGTCGCCGGCGCGGTTGTGGGTGGAGCCGACGCCGCCGGGAACAGAGGTGGTCGCCGTTCACGTGCTGCCGAGAATGAATTGGGCTGCGGACTCATGA

Protein sequence

MAAPPLFPSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVKGHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFWEDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVHVLPRMNWAADS

Homology

[Close]

BLAST of IVF0005875 vs. ExPASy Swiss-Prot
Match: Q8GX29 (F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-85
Identity = 166/322 (51.55%), Postives = 220/322 (68.32%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSN-------SLDFFNFDPISSKWSPLPPPPNSPSSH-LLIHHPS 67
           P FP F SLYAL   S++       S+ F  F+P+SSKW PLPPPP  P  H +L  HPS
Sbjct: 71  PEFPSFPSLYALFVDSTSDTGRVNPSVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPS 130

Query: 68  FLSRHLPVQSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAG 127
           F+S +LP+Q +S +G L+L+A +   L PA+  PL+F P S+SW   P + +PRRWCA G
Sbjct: 131 FISFNLPIQCVSAAGKLILIAGSNQQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATG 190

Query: 128 ALRGSVYVASGIGSFFSTDVARSVERWDL----KANGAGDWEKVSGLKDGRFSRDAIDAV 187
           A  G++Y+ASGI S FS+ VA+SVE+ DL    + N   +WEK+  ++D RFSR+AIDAV
Sbjct: 191 ACDGAIYIASGISSQFSSTVAKSVEKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAV 250

Query: 188 GWKGKLCMVNVKGHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSG 247
           G++ KL MVNVKG A+KEG +YD+ KD+WE MPE M+ GWRGP AAM+EE +Y VDE  G
Sbjct: 251 GYRRKLLMVNVKGDAVKEGAIYDVVKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRG 310

Query: 248 SLRRYDPERDFWEDVM----ESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPAR 307
           ++R+YD E+  W +V+        LKGA Q+ A  G++CVV G   G+IVVVDV A PA+
Sbjct: 311 TVRKYDDEKREWREVVVVEGGEEMLKGATQVTADSGKLCVVTGD--GKIVVVDVAAEPAK 370

Query: 308 LWVEPTPPGTEVVAVHVLPRMN 314
           +W    P G E V+VHVLPRM+
Sbjct: 371 IWNVEIPDGLEPVSVHVLPRMS 390

[Close]

BLAST of IVF0005875 vs. ExPASy Swiss-Prot
Match: Q93W93 (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 59/239 (24.69%), Postives = 94/239 (39.33%), Query Frame = 0


Query: 16  LYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLSVSGH 75
           +Y         + +  FDPIS  W PLPP P               S  +      +SG 
Sbjct: 132 VYVFKRDRDGKISWNTFDPISQLWQPLPPVPRE------------YSEAVGFGCAVLSGC 191

Query: 76  LLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASGIGSFF 135
            L L      L  ++ R + ++  +N W  AP +   R +     +   +YVA G     
Sbjct: 192 HLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGI 251

Query: 136 STDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVKGHALKEGL 195
              + RS E +D   N      + S + D   +   +  V +  K  +  +  H L    
Sbjct: 252 QRTL-RSAEVYDPNKN------RWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSE 311

Query: 196 VYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSG-SLRRYDPERDFWEDVMES 254
            YD E + W  + +GM+ GWR P  +++   +Y +D   G  LR +D   D W   M+S
Sbjct: 312 AYDPEVNSWSPVSDGMVAGWRNPCTSLNGR-LYGLDCRDGCKLRVFDESTDSWNKFMDS 350

[Close]

BLAST of IVF0005875 vs. ExPASy Swiss-Prot
Match: Q9C6Z0 (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-07
Identity = 43/162 (26.54%), Postives = 67/162 (41.36%), Query Frame = 0


Query: 94  LLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASG-IGSFFSTDVARSVERWDLKANG 153
           L +    N W +   + T R + A+G + G +Y A G     +  D A  +   D     
Sbjct: 178 LKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAEVLNPLD----- 237

Query: 154 AGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVN---VKGHALKEGLVYDLEKDEWEDMPE 213
            G+W  VS +     S    D     GKL +             G VYD   D+WE M  
Sbjct: 238 -GNWRPVSNMVAHMAS---YDTAVLNGKLLVTEGWLWPFFVSPRGQVYDPRTDQWETMSM 297

Query: 214 GMIGGWRGPAAAMDEEDMYVVDEVSG-SLRRYDPERDFWEDV 251
           G+  GW G +  + +  +++V E+    ++ YDP  D WE +
Sbjct: 298 GLREGWTGTSVVIYDR-LFIVSELERMKMKVYDPVTDSWETI 329

[Close]

BLAST of IVF0005875 vs. ExPASy Swiss-Prot
Match: Q9LM55 (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.5e-06
Identity = 67/294 (22.79%), Postives = 110/294 (37.41%), Query Frame = 0


Query: 16  LYALLSSSSNSLDFFNFDPISSKWSPLPPPP------------------NSPSSHLLIHH 75
           LY L     + L ++  DP+S+KW  LPP P                   +PS ++    
Sbjct: 97  LYVLTKGHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIV 156

Query: 76  PSFLSRHLPVQSL--------SVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPL 135
            SFL R    + +        +V G L ++   + +    +     F P  NSW     +
Sbjct: 157 RSFLGRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRS--KTVSCVWRFDPILNSWSEVSSM 216

Query: 136 PTPRRWCAAGALRGSVYVASGIG-SFFSTDVARSVERWDLKANGAGDWEKVSGLKDGR-- 195
              R +   G L   +YV  G+          +S E +D   +    W +V  +   +  
Sbjct: 217 LASRAYSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDA---WSEVPSMPFSKAQ 276

Query: 196 -----FSRDAIDAVG-----WKGKLCM----------VNVKGHALKEGLVYDLEKDEWED 252
                F  D +  +      + G+LC+          V+V G       VYD E + W +
Sbjct: 277 VLPNAFLADLLKPIATGMTCYNGRLCVPQSLYSWPFFVDVGGE------VYDPETNLWVE 336

[Close]

BLAST of IVF0005875 vs. ExPASy TrEMBL
Match: A0A5A7UHG3 (F-box/kelch-repeat protein SKIP25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00900 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.8e-179
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV
Sbjct: 65  PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 124

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV
Sbjct: 125 QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 184

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK
Sbjct: 185 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 244

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW
Sbjct: 245 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 304

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH
Sbjct: 305 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 364

Query: 308 VLPRMNWAADS 319
           VLPRMNWAADS
Sbjct: 365 VLPRMNWAADS 375

[Close]

BLAST of IVF0005875 vs. ExPASy TrEMBL
Match: A0A1S3BK00 (F-box/kelch-repeat protein SKIP25 OS=Cucumis melo OX=3656 GN=LOC103490713 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 1.8e-179
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV
Sbjct: 65  PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 124

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV
Sbjct: 125 QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 184

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK
Sbjct: 185 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 244

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW
Sbjct: 245 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 304

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH
Sbjct: 305 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 364

Query: 308 VLPRMNWAADS 319
           VLPRMNWAADS
Sbjct: 365 VLPRMNWAADS 375

[Close]

BLAST of IVF0005875 vs. ExPASy TrEMBL
Match: A0A0A0L136 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G003480 PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 6.2e-169
Identity = 293/311 (94.21%), Postives = 302/311 (97.11%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV
Sbjct: 65  PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 124

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATT+NLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGAL GSVYV
Sbjct: 125 QSLTVSGHLLLLAATTYNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALHGSVYV 184

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWD K+NGA  WEKVSGLKDG+FSRDAIDAVGWKGKLCMVNVK
Sbjct: 185 ASGIGSFFSTDVARSVERWDFKSNGADGWEKVSGLKDGKFSRDAIDAVGWKGKLCMVNVK 244

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           GHALKEGLVYDLEKDEWE+MPEGMI GWRGP AAMDE+DMYVVDE+SGSLRRYD E+DFW
Sbjct: 245 GHALKEGLVYDLEKDEWEEMPEGMIEGWRGPVAAMDEKDMYVVDEISGSLRRYDSEKDFW 304

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+VMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVV SPARLWVEPTPPGTEVVAVH
Sbjct: 305 EEVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVTSPARLWVEPTPPGTEVVAVH 364

Query: 308 VLPRMNWAADS 319
           VLPRMN AADS
Sbjct: 365 VLPRMNGAADS 375

[Close]

BLAST of IVF0005875 vs. ExPASy TrEMBL
Match: A0A6J1E5V4 (F-box/kelch-repeat protein SKIP25-like OS=Cucurbita moschata OX=3662 GN=LOC111430994 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.9e-152
Identity = 268/306 (87.58%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPF SLYALLSSS +S+DFFNFDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPV
Sbjct: 64  PSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPV 123

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATTHNLLPALPRPLLFSP SNSWR APPLPTPRRWCAAGALRGSVYV
Sbjct: 124 QSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYV 183

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLK    G WEKVSGLKDGRFSRDA DAVGW+GKLCMVNVK
Sbjct: 184 ASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVK 243

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           G A KEGLVYDLE+DEWE+M EGMIGGWRGP A M+EE+MYVVDEV+GSLRRYDPERDFW
Sbjct: 244 GDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDPERDFW 303

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+V ESNRLKGAVQMAAGGGRVCVVC GSR EIVVVDVVASP RLWVE TPPG EVVAVH
Sbjct: 304 EEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVH 363

Query: 308 VLPRMN 314
           VLPRM+
Sbjct: 364 VLPRMS 369

[Close]

BLAST of IVF0005875 vs. ExPASy TrEMBL
Match: A0A6J1HK01 (F-box/kelch-repeat protein SKIP25-like OS=Cucurbita maxima OX=3661 GN=LOC111465215 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.5e-151
Identity = 267/306 (87.25%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPF SLYALLSSS +S+DFFNFDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPV
Sbjct: 62  PSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPV 121

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATTHNLLPALPRPLLFSP SNSWR APPLPTPRRWCAAG+LRGSVYV
Sbjct: 122 QSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGSLRGSVYV 181

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLK    G WEKVSGLKDGRFSRDA DAVGW+GKLCMVNVK
Sbjct: 182 ASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVK 241

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           G A KEGLVYDLE+DEWE+M EGMIGGWRGP A M+EE+MYVVDEV+GSLRRYDPERDFW
Sbjct: 242 GDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDPERDFW 301

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+V ESNRLKGAVQMAAGGGRVCVVC GSR EIVVVDVVASP RLWVE TPPG EVVAVH
Sbjct: 302 EEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVH 361

Query: 308 VLPRMN 314
           VLPRM+
Sbjct: 362 VLPRMS 367

[Close]

BLAST of IVF0005875 vs. NCBI nr
Match: XP_008448576.1 (PREDICTED: F-box/kelch-repeat protein SKIP25 [Cucumis melo] >KAA0052979.1 F-box/kelch-repeat protein SKIP25 [Cucumis melo var. makuwa] >TYK11435.1 F-box/kelch-repeat protein SKIP25 [Cucumis melo var. makuwa])

HSP 1 Score: 635 bits (1637), Expect = 1.40e-228
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV
Sbjct: 65  PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 124

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV
Sbjct: 125 QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 184

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK
Sbjct: 185 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 244

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW
Sbjct: 245 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 304

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH
Sbjct: 305 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 364

Query: 308 VLPRMNWAADS 318
           VLPRMNWAADS
Sbjct: 365 VLPRMNWAADS 375

[Close]

BLAST of IVF0005875 vs. NCBI nr
Match: XP_004146198.1 (F-box/kelch-repeat protein SKIP25 [Cucumis sativus] >KGN55680.1 hypothetical protein Csa_009702 [Cucumis sativus])

HSP 1 Score: 600 bits (1546), Expect = 1.02e-214
Identity = 293/311 (94.21%), Postives = 302/311 (97.11%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV
Sbjct: 65  PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 124

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATT+NLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGAL GSVYV
Sbjct: 125 QSLTVSGHLLLLAATTYNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALHGSVYV 184

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWD K+NGA  WEKVSGLKDG+FSRDAIDAVGWKGKLCMVNVK
Sbjct: 185 ASGIGSFFSTDVARSVERWDFKSNGADGWEKVSGLKDGKFSRDAIDAVGWKGKLCMVNVK 244

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           GHALKEGLVYDLEKDEWE+MPEGMI GWRGP AAMDE+DMYVVDE+SGSLRRYD E+DFW
Sbjct: 245 GHALKEGLVYDLEKDEWEEMPEGMIEGWRGPVAAMDEKDMYVVDEISGSLRRYDSEKDFW 304

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+VMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVV SPARLWVEPTPPGTEVVAVH
Sbjct: 305 EEVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVTSPARLWVEPTPPGTEVVAVH 364

Query: 308 VLPRMNWAADS 318
           VLPRMN AADS
Sbjct: 365 VLPRMNGAADS 375

[Close]

BLAST of IVF0005875 vs. NCBI nr
Match: XP_038876619.1 (LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP25 [Benincasa hispida])

HSP 1 Score: 578 bits (1490), Expect = 7.46e-206
Identity = 287/311 (92.28%), Postives = 294/311 (94.53%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPFSSLYALLSSSSNSLDFFNFDPISSKW+PLPPPPNS   HLLIHHPSFLSRHLPV
Sbjct: 89  PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWTPLPPPPNS---HLLIHHPSFLSRHLPV 148

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATTHNLLPALPRPLLFSPFSNSWR APPLPTPRRWCAAGALRGSVYV
Sbjct: 149 QSLTVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRFAPPLPTPRRWCAAGALRGSVYV 208

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLK NG G WEKV GLKDGRFSRDAIDAVGWKGKLCMVNVK
Sbjct: 209 ASGIGSFFSTDVARSVERWDLKPNGGGGWEKVCGLKDGRFSRDAIDAVGWKGKLCMVNVK 268

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           G A KEGLVYDLE+ EWE+MPEGMIGGWRGPAAAMDEE+MYVVDEVSGSLRRYD E DFW
Sbjct: 269 GDAPKEGLVYDLERGEWEEMPEGMIGGWRGPAAAMDEEEMYVVDEVSGSLRRYDSETDFW 328

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+VM SNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASP RLWVE TPPGTEVVAVH
Sbjct: 329 EEVMASNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPRLWVEATPPGTEVVAVH 388

Query: 308 VLPRMNWAADS 318
           VLPRMN AA+S
Sbjct: 389 VLPRMNGAAES 396

[Close]

BLAST of IVF0005875 vs. NCBI nr
Match: XP_023552710.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 543 bits (1400), Expect = 1.63e-192
Identity = 268/306 (87.58%), Postives = 281/306 (91.83%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPF SLYALLSSS +S+DFFNFDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPV
Sbjct: 64  PSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPV 123

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATTHNLLPALPRPLLFSP SNSWRLAPPLPTPRRWCAAG+LRGSVYV
Sbjct: 124 QSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRLAPPLPTPRRWCAAGSLRGSVYV 183

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLK    G WEKVSGLKDGRFSRDA DAVGW+GKLCMVNVK
Sbjct: 184 ASGIGSFFSTDVARSVERWDLKPMDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVK 243

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           G A KEGLVYDLE+DEWE+M EGMIGGWRGP A M+EE+MYVVDEV+GSLRRYDPERDFW
Sbjct: 244 GDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDPERDFW 303

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+V ESNRLKGAVQMAAGGGRVCVVC GSR EIVVVDVVASP RLWVE TPPG EVVAVH
Sbjct: 304 EEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVH 363

Query: 308 VLPRMN 313
           VLPRM+
Sbjct: 364 VLPRMS 369

[Close]

BLAST of IVF0005875 vs. NCBI nr
Match: XP_022923249.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita moschata] >KAG6577762.1 F-box/kelch-repeat protein SKIP25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543 bits (1398), Expect = 3.30e-192
Identity = 268/306 (87.58%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPV 67
           PSFPPF SLYALLSSS +S+DFFNFDPISSKW+ LPP PN PS  LLIHHPSFLSRHLPV
Sbjct: 64  PSFPPFFSLYALLSSSPDSIDFFNFDPISSKWTSLPPHPNPPSLQLLIHHPSFLSRHLPV 123

Query: 68  QSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYV 127
           QSL+VSGHLLLLAATTHNLLPALPRPLLFSP SNSWR APPLPTPRRWCAAGALRGSVYV
Sbjct: 124 QSLAVSGHLLLLAATTHNLLPALPRPLLFSPLSNSWRFAPPLPTPRRWCAAGALRGSVYV 183

Query: 128 ASGIGSFFSTDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVK 187
           ASGIGSFFSTDVARSVERWDLK    G WEKVSGLKDGRFSRDA DAVGW+GKLCMVNVK
Sbjct: 184 ASGIGSFFSTDVARSVERWDLKPIDGGAWEKVSGLKDGRFSRDATDAVGWRGKLCMVNVK 243

Query: 188 GHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSGSLRRYDPERDFW 247
           G A KEGLVYDLE+DEWE+M EGMIGGWRGP A M+EE+MYVVDEV+GSLRRYDPERDFW
Sbjct: 244 GDARKEGLVYDLERDEWEEMSEGMIGGWRGPVATMEEEEMYVVDEVTGSLRRYDPERDFW 303

Query: 248 EDVMESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPARLWVEPTPPGTEVVAVH 307
           E+V ESNRLKGAVQMAAGGGRVCVVC GSR EIVVVDVVASP RLWVE TPPG EVVAVH
Sbjct: 304 EEVTESNRLKGAVQMAAGGGRVCVVCSGSRREIVVVDVVASPPRLWVEATPPGMEVVAVH 363

Query: 308 VLPRMN 313
           VLPRM+
Sbjct: 364 VLPRMS 369

[Close]

BLAST of IVF0005875 vs. TAIR 10
Match: AT1G31350.1 (KAR-UP F-box 1 )

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-86
Identity = 166/322 (51.55%), Postives = 220/322 (68.32%), Query Frame = 0


Query: 8   PSFPPFSSLYALLSSSSN-------SLDFFNFDPISSKWSPLPPPPNSPSSH-LLIHHPS 67
           P FP F SLYAL   S++       S+ F  F+P+SSKW PLPPPP  P  H +L  HPS
Sbjct: 71  PEFPSFPSLYALFVDSTSDTGRVNPSVRFMCFNPVSSKWYPLPPPPPDPPLHRILYRHPS 130

Query: 68  FLSRHLPVQSLSVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAG 127
           F+S +LP+Q +S +G L+L+A +   L PA+  PL+F P S+SW   P + +PRRWCA G
Sbjct: 131 FISFNLPIQCVSAAGKLILIAGSNQQLSPAISHPLIFDPISSSWSSGPRIGSPRRWCATG 190

Query: 128 ALRGSVYVASGIGSFFSTDVARSVERWDL----KANGAGDWEKVSGLKDGRFSRDAIDAV 187
           A  G++Y+ASGI S FS+ VA+SVE+ DL    + N   +WEK+  ++D RFSR+AIDAV
Sbjct: 191 ACDGAIYIASGISSQFSSTVAKSVEKLDLTEQNRNNHRFNWEKLRDMRDLRFSREAIDAV 250

Query: 188 GWKGKLCMVNVKGHALKEGLVYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSG 247
           G++ KL MVNVKG A+KEG +YD+ KD+WE MPE M+ GWRGP AAM+EE +Y VDE  G
Sbjct: 251 GYRRKLLMVNVKGDAVKEGAIYDVVKDDWEPMPEEMLVGWRGPVAAMEEEILYSVDERRG 310

Query: 248 SLRRYDPERDFWEDVM----ESNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPAR 307
           ++R+YD E+  W +V+        LKGA Q+ A  G++CVV G   G+IVVVDV A PA+
Sbjct: 311 TVRKYDDEKREWREVVVVEGGEEMLKGATQVTADSGKLCVVTGD--GKIVVVDVAAEPAK 370

Query: 308 LWVEPTPPGTEVVAVHVLPRMN 314
           +W    P G E V+VHVLPRM+
Sbjct: 371 IWNVEIPDGLEPVSVHVLPRMS 390

[Close]

BLAST of IVF0005875 vs. TAIR 10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 8.2e-12
Identity = 59/239 (24.69%), Postives = 94/239 (39.33%), Query Frame = 0


Query: 16  LYALLSSSSNSLDFFNFDPISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLSVSGH 75
           +Y         + +  FDPIS  W PLPP P               S  +      +SG 
Sbjct: 132 VYVFKRDRDGKISWNTFDPISQLWQPLPPVPRE------------YSEAVGFGCAVLSGC 191

Query: 76  LLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASGIGSFF 135
            L L      L  ++ R + ++  +N W  AP +   R +     +   +YVA G     
Sbjct: 192 HLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGECEGI 251

Query: 136 STDVARSVERWDLKANGAGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVNVKGHALKEGL 195
              + RS E +D   N      + S + D   +   +  V +  K  +  +  H L    
Sbjct: 252 QRTL-RSAEVYDPNKN------RWSFIADMSTAMVPLIGVVYDKKWFLKGLGSHQLVMSE 311

Query: 196 VYDLEKDEWEDMPEGMIGGWRGPAAAMDEEDMYVVDEVSG-SLRRYDPERDFWEDVMES 254
            YD E + W  + +GM+ GWR P  +++   +Y +D   G  LR +D   D W   M+S
Sbjct: 312 AYDPEVNSWSPVSDGMVAGWRNPCTSLNGR-LYGLDCRDGCKLRVFDESTDSWNKFMDS 350

[Close]

BLAST of IVF0005875 vs. TAIR 10
Match: AT1G30090.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-08
Identity = 43/162 (26.54%), Postives = 67/162 (41.36%), Query Frame = 0


Query: 94  LLFSPFSNSWRLAPPLPTPRRWCAAGALRGSVYVASG-IGSFFSTDVARSVERWDLKANG 153
           L +    N W +   + T R + A+G + G +Y A G     +  D A  +   D     
Sbjct: 178 LKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLYELDCAEVLNPLD----- 237

Query: 154 AGDWEKVSGLKDGRFSRDAIDAVGWKGKLCMVN---VKGHALKEGLVYDLEKDEWEDMPE 213
            G+W  VS +     S    D     GKL +             G VYD   D+WE M  
Sbjct: 238 -GNWRPVSNMVAHMAS---YDTAVLNGKLLVTEGWLWPFFVSPRGQVYDPRTDQWETMSM 297

Query: 214 GMIGGWRGPAAAMDEEDMYVVDEVSG-SLRRYDPERDFWEDV 251
           G+  GW G +  + +  +++V E+    ++ YDP  D WE +
Sbjct: 298 GLREGWTGTSVVIYDR-LFIVSELERMKMKVYDPVTDSWETI 329

[Close]

BLAST of IVF0005875 vs. TAIR 10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-07
Identity = 67/294 (22.79%), Postives = 110/294 (37.41%), Query Frame = 0


Query: 16  LYALLSSSSNSLDFFNFDPISSKWSPLPPPP------------------NSPSSHLLIHH 75
           LY L     + L ++  DP+S+KW  LPP P                   +PS ++    
Sbjct: 97  LYVLTKGHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIV 156

Query: 76  PSFLSRHLPVQSL--------SVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRLAPPL 135
            SFL R    + +        +V G L ++   + +    +     F P  NSW     +
Sbjct: 157 RSFLGRRDSSEQMPFCGCAIGAVDGGLYVIGGLSRS--KTVSCVWRFDPILNSWSEVSSM 216

Query: 136 PTPRRWCAAGALRGSVYVASGIG-SFFSTDVARSVERWDLKANGAGDWEKVSGLKDGR-- 195
              R +   G L   +YV  G+          +S E +D   +    W +V  +   +  
Sbjct: 217 LASRAYSKTGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDA---WSEVPSMPFSKAQ 276

Query: 196 -----FSRDAIDAVG-----WKGKLCM----------VNVKGHALKEGLVYDLEKDEWED 252
                F  D +  +      + G+LC+          V+V G       VYD E + W +
Sbjct: 277 VLPNAFLADLLKPIATGMTCYNGRLCVPQSLYSWPFFVDVGGE------VYDPETNLWVE 336

The following BLAST results are available for this feature:

BLAST of IVF0005875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GX29	2.4e-85	51.55	F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1...	[more]
Q93W93	1.1e-10	24.69	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]
Q9C6Z0	2.6e-07	26.54	F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g3009...	[more]
Q9LM55	6.5e-06	22.79	F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g2204...	[more]

BLAST of IVF0005875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHG3	1.8e-179	100.00	F-box/kelch-repeat protein SKIP25 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BK00	1.8e-179	100.00	F-box/kelch-repeat protein SKIP25 OS=Cucumis melo OX=3656 GN=LOC103490713 PE=4 S...	[more]
A0A0A0L136	6.2e-169	94.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G003480 PE=4 SV=1	[more]
A0A6J1E5V4	6.9e-152	87.58	F-box/kelch-repeat protein SKIP25-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1HK01	1.5e-151	87.25	F-box/kelch-repeat protein SKIP25-like OS=Cucurbita maxima OX=3661 GN=LOC1114652...	[more]

BLAST of IVF0005875 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448576.1	1.40e-228	100.00	PREDICTED: F-box/kelch-repeat protein SKIP25 [Cucumis melo] >KAA0052979.1 F-box/...	[more]
XP_004146198.1	1.02e-214	94.21	F-box/kelch-repeat protein SKIP25 [Cucumis sativus] >KGN55680.1 hypothetical pro...	[more]
XP_038876619.1	7.46e-206	92.28	LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP25 [Benincasa hispida]	[more]
XP_023552710.1	1.63e-192	87.58	F-box/kelch-repeat protein SKIP25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923249.1	3.30e-192	87.58	F-box/kelch-repeat protein SKIP25-like [Cucurbita moschata] >KAG6577762.1 F-box/...	[more]

BLAST of IVF0005875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31350.1	1.7e-86	51.55	KAR-UP F-box 1	[more]
AT1G55270.1	8.2e-12	24.69	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G30090.1	1.9e-08	26.54	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G22040.1	4.6e-07	22.79	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 16..264 e-value: 3.4E-26 score: 93.8
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 22..286
None	No IPR available	PANTHER	PTHR47590	F-BOX/KELCH-REPEAT PROTEIN SKIP25	coord: 8..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005875.1	IVF0005875.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding