Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCAGGGGACGTATTTTGAGGATAACAAACATCATTTGGTGAGTAGTATCATTCCTTCCCTTTCACAGCCCAAACTACTCAAGAACCAAGGGAACAACTTAGGTGGTAAAGAAATTCGCTTGGTTGAGGCGATGGCTACTACTCTTGAGGAGGAGATAAATGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAATAAAGCGAAGGTATCAGGTGATGATCTCGACAGAAGGGGTCCAAGGGAAGTCCCTAATGTTTCACCACTGGTTTGCACATTTTCTATTCTTAAATTTTTTTTTGTTCATCTTCTTCACAAATGACTTATTAATTGTTTACTTCTGCAGTCACCTTTGAACGCTCATCTTGAAGGCCTTATAGAGCTAGGCAGCGATGAATCTTTGACGGGACCTCATGCAATTGATTCTACCATTGAGGAAGTTGGTACCTCGAAGACTCCCGCCTCTAAACCAACCGAATAG
mRNA sequence
ATGAGGCAGGGGACGTATTTTGAGGATAACAAACATCATTTGGTGAGTAGTATCATTCCTTCCCTTTCACAGCCCAAACTACTCAAGAACCAAGGGAACAACTTAGGTGGTAAAGAAATTCGCTTGGTTGAGGCGATGGCTACTACTCTTGAGGAGGAGATAAATGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAATAAAGCGAAGGTATCAGGTGATGATCTCGACAGAAGGGGTCCAAGGGAAGTCCCTAATGTTTCACCACTGTCACCTTTGAACGCTCATCTTGAAGGCCTTATAGAGCTAGGCAGCGATGAATCTTTGACGGGACCTCATGCAATTGATTCTACCATTGAGGAAGTTGGTACCTCGAAGACTCCCGCCTCTAAACCAACCGAATAG
Coding sequence (CDS)
ATGAGGCAGGGGACGTATTTTGAGGATAACAAACATCATTTGGTGAGTAGTATCATTCCTTCCCTTTCACAGCCCAAACTACTCAAGAACCAAGGGAACAACTTAGGTGGTAAAGAAATTCGCTTGGTTGAGGCGATGGCTACTACTCTTGAGGAGGAGATAAATGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAATAAAGCGAAGGTATCAGGTGATGATCTCGACAGAAGGGGTCCAAGGGAAGTCCCTAATGTTTCACCACTGTCACCTTTGAACGCTCATCTTGAAGGCCTTATAGAGCTAGGCAGCGATGAATCTTTGACGGGACCTCATGCAATTGATTCTACCATTGAGGAAGTTGGTACCTCGAAGACTCCCGCCTCTAAACCAACCGAATAG
Protein sequence
MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDESDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGPHAIDSTIEEVGTSKTPASKPTE
Homology
BLAST of IVF0005831 vs. ExPASy TrEMBL
Match:
A0A5D3E6F4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00890 PE=4 SV=1)
HSP 1 Score: 260.0 bits (663), Expect = 5.8e-66
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query: 1 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 60
MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE
Sbjct: 10 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 69
Query: 61 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGP 120
SDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGP
Sbjct: 70 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGP 129
Query: 121 HAIDSTIEEV 131
HAIDSTIEEV
Sbjct: 130 HAIDSTIEEV 139
BLAST of IVF0005831 vs. ExPASy TrEMBL
Match:
A0A5D3BCT1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2750G00050 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 9.6e-53
Identity = 113/144 (78.47%), Postives = 120/144 (83.33%), Query Frame = 0
Query: 1 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 60
MR GTYFEDN HHLVSS IP SQPKL KN+G+NLGGKEIRLVE MA TL+EEI EHKDE
Sbjct: 1 MRHGTYFEDNIHHLVSSTIPPPSQPKLTKNRGSNLGGKEIRLVEVMAATLKEEIKEHKDE 60
Query: 61 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPRE--VPNVSPLSPLNAHLEGLIELGSDESLT 120
SDSSKSDRHWKRPL KAKVSGDD D RG VPNV PLSPLNAHLEGL+EL SD+SLT
Sbjct: 61 SDSSKSDRHWKRPLKKAKVSGDDPDGRGSSAFGVPNVPPLSPLNAHLEGLVELDSDKSLT 120
Query: 121 GPHAIDSTIEEVGTSKTPASKPTE 143
GP+A+DSTIE VGT KT SKP E
Sbjct: 121 GPYAVDSTIEGVGTLKTTVSKPIE 144
BLAST of IVF0005831 vs. ExPASy TrEMBL
Match:
A0A5A7SQC9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00140 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 9.6e-53
Identity = 110/143 (76.92%), Postives = 121/143 (84.62%), Query Frame = 0
Query: 2 RQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDES 61
+ GTYFEDN+HHLVSS+IP SQP+L KN+G+NLGGKEIRLVEAMA LEEE+ EHKDES
Sbjct: 214 KHGTYFEDNRHHLVSSVIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKEHKDES 273
Query: 62 DSSKSDRHWKRPLNKAKVSGDDLDRRG--PREVPNVSPLSPLNAHLEGLIELGSDESLTG 121
DSSKSDRHWKRPL KAKVSGD D RG EVP+V PLSPLN HLEGLIE SDESLTG
Sbjct: 274 DSSKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDHLEGLIEPDSDESLTG 333
Query: 122 PHAIDSTIEEVGTSKTPASKPTE 143
PHA+DS EEVGTS+TP +KPTE
Sbjct: 334 PHAVDSAFEEVGTSRTPVNKPTE 356
BLAST of IVF0005831 vs. ExPASy TrEMBL
Match:
A0A5A7UVX0 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00390 PE=4 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 1.4e-51
Identity = 110/144 (76.39%), Postives = 120/144 (83.33%), Query Frame = 0
Query: 1 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 60
MR TYFE+N+HHLVSS IP SQP+L KN+G+NLGGKEIRLVEAMA LEEE+NEHKDE
Sbjct: 219 MRHMTYFEENRHHLVSSAIPPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVNEHKDE 278
Query: 61 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPRE--VPNVSPLSPLNAHLEGLIELGSDESLT 120
SDSSKSDRHWKRPL KAKVSGD+ D RG VP+V PLSPLN HLEGLI L SDESL
Sbjct: 279 SDSSKSDRHWKRPLKKAKVSGDNPDGRGLSALIVPDVPPLSPLNDHLEGLIALDSDESLM 338
Query: 121 GPHAIDSTIEEVGTSKTPASKPTE 143
GPHA+DS EEVGTSKTP +KPTE
Sbjct: 339 GPHAVDSAFEEVGTSKTPVNKPTE 362
BLAST of IVF0005831 vs. ExPASy TrEMBL
Match:
A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51
Identity = 109/143 (76.22%), Postives = 119/143 (83.22%), Query Frame = 0
Query: 2 RQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDES 61
+ GTYFEDN+HHLVSS IP SQP+L KN+G+NLGGKEIRLVEAMA LEEE+ E KDES
Sbjct: 533 KHGTYFEDNRHHLVSSAIPPSSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKERKDES 592
Query: 62 DSSKSDRHWKRPLNKAKVSGDDLDRRG--PREVPNVSPLSPLNAHLEGLIELGSDESLTG 121
DSSKSDRHWKRPL KAKVSGD D RG EVP+V PLSPLN HLEGLIE SDESLTG
Sbjct: 593 DSSKSDRHWKRPLKKAKVSGDHPDGRGLSALEVPDVPPLSPLNDHLEGLIEPDSDESLTG 652
Query: 122 PHAIDSTIEEVGTSKTPASKPTE 143
PHA+DS EEVGTS+TP +KPTE
Sbjct: 653 PHAVDSAFEEVGTSRTPVNKPTE 675
BLAST of IVF0005831 vs. NCBI nr
Match:
KAA0035658.1 (hypothetical protein E6C27_scaffold285G003540 [Cucumis melo var. makuwa] >TYK30885.1 hypothetical protein E5676_scaffold455G00890 [Cucumis melo var. makuwa])
HSP 1 Score: 260 bits (664), Expect = 3.10e-86
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
Query: 1 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 60
MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE
Sbjct: 10 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 69
Query: 61 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGP 120
SDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGP
Sbjct: 70 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPREVPNVSPLSPLNAHLEGLIELGSDESLTGP 129
Query: 121 HAIDSTIEEV 130
HAIDSTIEEV
Sbjct: 130 HAIDSTIEEV 139
BLAST of IVF0005831 vs. NCBI nr
Match:
KAA0054388.1 (hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa] >TYJ96814.1 hypothetical protein E5676_scaffold2750G00050 [Cucumis melo var. makuwa])
HSP 1 Score: 216 bits (549), Expect = 1.21e-66
Identity = 113/144 (78.47%), Postives = 120/144 (83.33%), Query Frame = 0
Query: 1 MRQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDE 60
MR GTYFEDN HHLVSS IP SQPKL KN+G+NLGGKEIRLVE MA TL+EEI EHKDE
Sbjct: 1 MRHGTYFEDNIHHLVSSTIPPPSQPKLTKNRGSNLGGKEIRLVEVMAATLKEEIKEHKDE 60
Query: 61 SDSSKSDRHWKRPLNKAKVSGDDLDRRGPRE--VPNVSPLSPLNAHLEGLIELGSDESLT 120
SDSSKSDRHWKRPL KAKVSGDD D RG VPNV PLSPLNAHLEGL+EL SD+SLT
Sbjct: 61 SDSSKSDRHWKRPLKKAKVSGDDPDGRGSSAFGVPNVPPLSPLNAHLEGLVELDSDKSLT 120
Query: 121 GPHAIDSTIEEVGTSKTPASKPTE 142
GP+A+DSTIE VGT KT SKP E
Sbjct: 121 GPYAVDSTIEGVGTLKTTVSKPIE 144
BLAST of IVF0005831 vs. NCBI nr
Match:
KAA0052877.1 (hypothetical protein E6C27_scaffold1184G00090 [Cucumis melo var. makuwa] >TYK14483.1 hypothetical protein E5676_scaffold186G001530 [Cucumis melo var. makuwa])
HSP 1 Score: 208 bits (529), Expect = 8.79e-65
Identity = 107/137 (78.10%), Postives = 119/137 (86.86%), Query Frame = 0
Query: 6 YFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDESDSSK 65
YFE+N+HHLVSS+IP SQ KL KN+G+NLGGKEIRLVEA+A TLEEEI EHKD+SD SK
Sbjct: 3 YFENNRHHLVSSVIPPPSQSKLPKNRGSNLGGKEIRLVEAVAATLEEEIKEHKDKSDRSK 62
Query: 66 SDRHWKRPLNKAKVSGDDLDRRGPRE--VPNVSPLSPLNAHLEGLIELGSDESLTGPHAI 125
SDRHWKRPL K KVS DDLD +G VP+VSPLSPLNAH +GLIELGSDESL GP+A+
Sbjct: 63 SDRHWKRPLKKTKVSDDDLDGKGSSALGVPDVSPLSPLNAHFKGLIELGSDESLMGPYAV 122
Query: 126 DSTIEEVGTSKTPASKP 140
DSTIEEVGTSKTPASKP
Sbjct: 123 DSTIEEVGTSKTPASKP 139
BLAST of IVF0005831 vs. NCBI nr
Match:
KAA0062878.1 (hypothetical protein E6C27_scaffold4427G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 208 bits (530), Expect = 2.19e-64
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 0
Query: 2 RQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDES 61
R TYFEDN HHLVSSIIP SQPKL KNQG+NL GKEI LVEAMA TLE+E+ EHKDES
Sbjct: 34 RHETYFEDNIHHLVSSIIPPPSQPKLPKNQGSNLSGKEICLVEAMAPTLEKEVKEHKDES 93
Query: 62 DSSKSDRHWKRPLNKAKVSGDDLDRRGPRE--VPNVSPLSPLNAHLEGLIELGSDESLTG 121
DSSKSDRHWKRPL KAKVSGDD D G VP+V PLSPLN HLEGLIEL SDE LTG
Sbjct: 94 DSSKSDRHWKRPLKKAKVSGDDPDGMGSSALGVPDVPPLSPLNDHLEGLIELDSDECLTG 153
Query: 122 PHAIDSTIEEVGTSKTPASKPTE 142
PHA++ST EEVGTSKTP +KP E
Sbjct: 154 PHAVNSTFEEVGTSKTPVTKPAE 176
BLAST of IVF0005831 vs. NCBI nr
Match:
TYK22511.1 (hypothetical protein E5676_scaffold387G00090 [Cucumis melo var. makuwa])
HSP 1 Score: 208 bits (530), Expect = 2.19e-64
Identity = 110/143 (76.92%), Postives = 117/143 (81.82%), Query Frame = 0
Query: 2 RQGTYFEDNKHHLVSSIIPSLSQPKLLKNQGNNLGGKEIRLVEAMATTLEEEINEHKDES 61
R TYFEDN HHLVSSIIP SQPKL KNQG+NL GKEI LVEAMA TLE+E+ EHKDES
Sbjct: 34 RHETYFEDNIHHLVSSIIPPPSQPKLPKNQGSNLSGKEICLVEAMAPTLEKEVKEHKDES 93
Query: 62 DSSKSDRHWKRPLNKAKVSGDDLDRRGPRE--VPNVSPLSPLNAHLEGLIELGSDESLTG 121
DSSKSDRHWKRPL KAKVSGDD D G VP+V PLSPLN HLEGLIEL SDE LTG
Sbjct: 94 DSSKSDRHWKRPLKKAKVSGDDPDGMGSSALGVPDVPPLSPLNDHLEGLIELDSDECLTG 153
Query: 122 PHAIDSTIEEVGTSKTPASKPTE 142
PHA++ST EEVGTSKTP +KP E
Sbjct: 154 PHAVNSTFEEVGTSKTPVTKPAE 176
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3E6F4 | 5.8e-66 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BCT1 | 9.6e-53 | 78.47 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SQC9 | 9.6e-53 | 76.92 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7UVX0 | 1.4e-51 | 76.39 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7TX42 | 1.8e-51 | 76.22 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0035658.1 | 3.10e-86 | 100.00 | hypothetical protein E6C27_scaffold285G003540 [Cucumis melo var. makuwa] >TYK308... | [more] |
KAA0054388.1 | 1.21e-66 | 78.47 | hypothetical protein E6C27_scaffold24G001310 [Cucumis melo var. makuwa] >TYJ9681... | [more] |
KAA0052877.1 | 8.79e-65 | 78.10 | hypothetical protein E6C27_scaffold1184G00090 [Cucumis melo var. makuwa] >TYK144... | [more] |
KAA0062878.1 | 2.19e-64 | 76.92 | hypothetical protein E6C27_scaffold4427G00080 [Cucumis melo var. makuwa] | [more] |
TYK22511.1 | 2.19e-64 | 76.92 | hypothetical protein E5676_scaffold387G00090 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |