IVF0005798 (gene) Melon (IVF77) v1

Overview
NameIVF0005798
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSquamosa promoter-binding-like protein
Locationchr08: 1826772 .. 1829407 (-)
RNA-Seq ExpressionIVF0005798
SyntenyIVF0005798
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCATTCACTTTCGTTTCCATTATAGTTTATATTATATATATAGTCATGTGGTTCTTCTAATTTGTTCTATACATATAAGACTTCTCTTAGGAAAATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTAAGAAAGAAAGCTTACTCTTTTTTCTTTTTTTTTTTTTCCTTTTTTTTTTGTTCAAATGATTTTCTTTTTAGAAAACCCTAATCTGGATCTGTCAAATTATTACTTTTGAGTATTACTTTTGTTAATCTTTACCAAAATGTTTCACTAACTATGGAATAAATTTATATTCAAAGGGTATTCTATTAGGGGGAAAGACATTTTTCCATTTATACAATGCAGTTGAGTCAATCCTTTTTTGAATTTTCTATTGAATATTAAACATGTATATCTTAATATTATCTCTTTTTTAAAAAAAAAAATTGTGTTTTGATAGTGATATATGTCACCACCCCAAATGGTTTTATTACCTATAGTAATTAATTTTCAATCAAGATAGTAAAATGCCCATTAATATAATAGTTATATATTGACTATCAATTTTATTTTTTAAAAAAAGTATTGACCTAATTCGTTTTTAAGGTCTTAAATTTTTAACAAACTAATAGATTAAGAATTGTTATATTAATAGTTAATTAAGTTTGTCTAAAGGTGGTAAATTGAATTTTTTTTTTCTTGAATAGAGATTGAGATCGAGGTTTTAGTGCATTACTACAAGTTTAATTAAAATTGGCTCTTCTTTTTTTCTTTTTTATAGTTAAGACTAAATGAATCAATTTTAGTTGTAATAACTTTTTAATTCAAAGTGGGTTTGAGAGTGAGTGATACAATTAATGTTATATTCTCACAGTGATTTTAAGCTTTCGATCGCTTTCTTAAAATTAGAGAACAATTGTGACATAGCGTTTTTGTGTGATTGGATTCATTTTAGTGTTAACACTTTTAATTATGTTGGACACTTAAAATAGTTTGATTTGGAATTCTAATTAATTAAGTTTACGCATCTTTTTATCCATTTGTTTTTAAAGATTAATTTAGAAGGCTGTTTTTTCTTCTTCCAAAAAAAATTCATTAACATAATTAATAAGCTACTATTTTGATTTTAGTTTTTTTGGTATGCTTTATTAAAAATTGTTTTTAAATATAATAAAATGAATCAAAATATTTAAAATTATAATAAAATATTATTTTCTATCAATAATAGTGTGGTTTAGTGATACCGTGATATCATCTATCTTCGATAATAGATATCGTTAGTAGTTTATAAAGATCTATCTATCACTAATTAACTAGACACTAATATTTTTTTTGCTTATATTTGGTGTAGTTTTACCATTTAAAAATAACCACACTTAATTAATTAAGTTTATTATATATATATATTAAGGTGATAAAATATTATTTTAGCATATCTTCATAAACTTATTTTGTTTTCGTTACTTCGTAAACTTATTTTATTTTAGTTTCATATTTTAAATAAATCTTAAATTTAGTTCGAAGTTAATTGAAGGGTGATGTAGAAGTTTTAATATAACTAATGATATTTTAAAATTGGATAAAATCAATTAAATATTTTGTAACCTATTGAGTTTTTTAGTTTTTATTTATTTATTATATTTTTAGTATCCATAGGAATATTTGTCAGTAGCTATTAACAACAATAATGGAAAAATAAATGAGAGGGAAGTAAAAATTGAAAATTAGAAAGGTGTGAAGGATTGATTAAATGCGCATTAAATGTGAAGTAAATATATTAGATGGGAAATGGAAAAGGGAAATTGTTTAGTTGTATTATGATGAACACAGGTTTCATGCAGTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGAGTCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGAACCACACAACACTCCTCACTGTGTCCACTAATTACCATAATTAATAATAATAAATAACAATAATGATACACTCATTACTAATGAAGAAGAAGATCAAGAAAGAATGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGCTACGCGTCATTGGAGTTAATTTTGTTTTGAGAGAGAGTCACCGGCGGTCCGGCCACCGCGATGAAAAAATGAACTGTTATGCTTCCTCTCTTCTGTCATCAAAAGAAAACCCAATTTATAGCCCTCTTTGTAATATAATTTGAAGTTGTCTCTTCATTATTAGACCAAAACTTTTCATTATATTTACTTAAGTTACACTATATATATTATTATATCTCTATCCACCACTCCTTGTATATTTATATAAACACAGAAATGGTTATTAGCCTATAAAATAAC

mRNA sequence

CTTTCATTCACTTTCGTTTCCATTATAGTTTATATTATATATATAGTCATGTGGTTCTTCTAATTTGTTCTATACATATAAGACTTCTCTTAGGAAAATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGAGTCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGAACCACACAACACTCCTCACTGTGTCCACTAATTACCATAATTAATAATAATAAATAACAATAATGATACACTCATTACTAATGAAGAAGAAGATCAAGAAAGAATGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGCTACGCGTCATTGGAGTTAATTTTGTTTTGAGAGAGAGTCACCGGCGGTCCGGCCACCGCGATGAAAAAATGAACTGTTATGCTTCCTCTCTTCTGTCATCAAAAGAAAACCCAATTTATAGCCCTCTTTGTAATATAATTTGAAGTTGTCTCTTCATTATTAGACCAAAACTTTTCATTATATTTACTTAAGTTACACTATATATATTATTATATCTCTATCCACCACTCCTTGTATATTTATATAAACACAGAAATGGTTATTAGCCTATAAAATAAC

Coding sequence (CDS)

ATGGCAAACTCAAACGATCACAGTTGGGAGGACATGATTTTAGATGACGATGACGACGACGATAACGACACCGAAGAAGTAGGGTTTGTAGATAATGAGAGGAGGAGGAGATCTGGTTTAACCACTGGTCGTGGTGGCGGCGGAGGGGGAAGGTCAACGGTGGCACGTTGCCAAGCCGATGGCTGCAATGCTGATCTGACTGGTGCGAGACCGTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCAGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCGGAATTCGATGACACAAAGAGAAGCTGCCGGAGTCGTTTGGCTGGTCACAATGAACGCCGCCGTAAAATCTTACCGGATTTTCATGGCCAATCCTCCACTAATTGA

Protein sequence

MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSSTN
Homology
BLAST of IVF0005798 vs. ExPASy Swiss-Prot
Match: A2YFT9 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 0

Query: 46  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH 105
           G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH
Sbjct: 170 GFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFH 229

Query: 106 AVSEFDDTKRSCRSRLAGHNERRRK 131
            ++EFD+ KRSCR RLA HN RRRK
Sbjct: 230 VLTEFDEAKRSCRKRLAEHNRRRRK 254

BLAST of IVF0005798 vs. ExPASy Swiss-Prot
Match: Q0DAE8 (Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL10 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 0

Query: 46  GGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH 105
           G GG      RCQA+GC ADL+GA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH
Sbjct: 170 GFGGAHHQPPRCQAEGCKADLSGAKHYHRRHKVCEYHAKASVVAASGKQQRFCQQCSRFH 229

Query: 106 AVSEFDDTKRSCRSRLAGHNERRRK 131
            ++EFD+ KRSCR RLA HN RRRK
Sbjct: 230 VLTEFDEAKRSCRKRLAEHNRRRRK 254

BLAST of IVF0005798 vs. ExPASy Swiss-Prot
Match: Q2R3Y1 (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL19 PE=3 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 59/88 (67.05%), Postives = 66/88 (75.00%), Query Frame = 0

Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G GGGGGG      C  DGC +DL+  R YHRRHKVCE HAK  VV++AG EQRFCQQCS
Sbjct: 79  GSGGGGGGGGGAEACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCS 138

Query: 103 RFHAVSEFDDTKRSCRSRLAGHNERRRK 131
           RFH ++EFDD K+SCR RL GHN RRRK
Sbjct: 139 RFHNLAEFDDGKKSCRKRLDGHNRRRRK 166

BLAST of IVF0005798 vs. ExPASy Swiss-Prot
Match: Q38741 (Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = 0

Query: 14  LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYH 73
           L    +   + +++G  ++ ++ R+   +G+   G   ST   CQ + C A++T A+PYH
Sbjct: 14  LPGSQEQGEEEDDIG--EDSKKTRALTPSGKRASG---STQRSCQVENCAAEMTNAKPYH 73

Query: 74  RRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRKILP 133
           RRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFD+ KRSCR RLAGHNERRRK   
Sbjct: 74  RRHKVCEFHAKAPVVLHSGLQQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKSSH 131

Query: 134 DFH 137
           D H
Sbjct: 134 DTH 131

BLAST of IVF0005798 vs. ExPASy Swiss-Prot
Match: Q8GXL3 (Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-27
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCS
Sbjct: 175 GESGMANSLST-PRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 234

Query: 103 RFHAVSEFDDTKRSCRSRLAGHNERRRK 131
           RFH +SEFD+ KRSCR RLA HN RRRK
Sbjct: 235 RFHLLSEFDNGKRSCRKRLADHNRRRRK 261

BLAST of IVF0005798 vs. ExPASy TrEMBL
Match: A0A1S3AZN8 (squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.6e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120

Query: 121 LAGHNERRRKILPDFHGQSSTN 143
           LAGHNERRRKILPDFHGQSSTN
Sbjct: 121 LAGHNERRRKILPDFHGQSSTN 142

BLAST of IVF0005798 vs. ExPASy TrEMBL
Match: A0A0A0KK74 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.4e-66
Identity = 128/142 (90.14%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+ DDDDDDND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSEDQGWEDMIV-DDDDDDNDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSRFHA+SEFDDTKRSCR R
Sbjct: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMR 120

Query: 121 LAGHNERRRKILPDFHGQSSTN 143
           LAGHNERRRKILPDFHGQSSTN
Sbjct: 121 LAGHNERRRKILPDFHGQSSTN 141

BLAST of IVF0005798 vs. ExPASy TrEMBL
Match: A0A5A7UDV9 (Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007580 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 104
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

BLAST of IVF0005798 vs. ExPASy TrEMBL
Match: A0A6J1KYC6 (Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC111497471 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.1e-48
Identity = 99/142 (69.72%), Postives = 122/142 (85.92%), Query Frame = 0

Query: 1   MANSNDHSWEDMI-LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQA 60
           M NS D  W D +  ++++++++D +EVGFV++ER++R+ +++ R G GGGR++VARCQA
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRA-VSSSRSGSGGGRTSVARCQA 60

Query: 61  DGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRS 120
           D CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFD+TKRSCR 
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRR 120

Query: 121 RLAGHNERRRKILPDFHGQSST 142
           RLAGHNERRRK LPDF GQSST
Sbjct: 121 RLAGHNERRRKNLPDFQGQSST 141

BLAST of IVF0005798 vs. ExPASy TrEMBL
Match: A0A6J1EFR3 (Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433770 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.3e-45
Identity = 96/144 (66.67%), Postives = 118/144 (81.94%), Query Frame = 0

Query: 1   MANSNDHSWEDMI---LDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARC 60
           M +S D  W + +    ++++++D+D +E+GFV +ER++R+  +  R G GGGR++V RC
Sbjct: 1   MEHSGDQGWGEPVEEEEEEEEEEDDDDDEIGFVKDERKKRAA-SGSRSGSGGGRTSVPRC 60

Query: 61  QADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSC 120
           QAD CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFD+TKRSC
Sbjct: 61  QADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSC 120

Query: 121 RSRLAGHNERRRKILPDFHGQSST 142
           R RLAGHNERRRK LPDF GQSST
Sbjct: 121 RRRLAGHNERRRKNLPDFQGQSST 143

BLAST of IVF0005798 vs. NCBI nr
Match: XP_008439842.1 (PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo])

HSP 1 Score: 287 bits (734), Expect = 1.08e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120

Query: 121 LAGHNERRRKILPDFHGQSSTN 142
           LAGHNERRRKILPDFHGQSSTN
Sbjct: 121 LAGHNERRRKILPDFHGQSSTN 142

BLAST of IVF0005798 vs. NCBI nr
Match: XP_004134953.1 (squamosa promoter-binding protein 1 [Cucumis sativus] >KGN49239.1 hypothetical protein Csa_003123 [Cucumis sativus])

HSP 1 Score: 260 bits (664), Expect = 4.97e-87
Identity = 128/142 (90.14%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANS D  WEDMI+DDDDDD ND EE+GFVDNERRRRSGLT+ RGGGGGGRSTVARCQAD
Sbjct: 1   MANSEDQGWEDMIVDDDDDD-NDNEEIGFVDNERRRRSGLTSARGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120
           GCNADLTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQCSRFHA+SEFDDTKRSCR R
Sbjct: 61  GCNADLTGAKPYHRRHKVCEFHSRAAVVILAGLEQRFCQQCSRFHALSEFDDTKRSCRMR 120

Query: 121 LAGHNERRRKILPDFHGQSSTN 142
           LAGHNERRRKILPDFHGQSSTN
Sbjct: 121 LAGHNERRRKILPDFHGQSSTN 141

BLAST of IVF0005798 vs. NCBI nr
Match: XP_038880830.1 (squamosa promoter-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 242 bits (618), Expect = 5.13e-80
Identity = 121/142 (85.21%), Postives = 130/142 (91.55%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           M NS D  WEDM++++DDD+D D EE+GFV++ERRRRS LT GRGG GGGR TVARCQAD
Sbjct: 1   MTNSEDQVWEDMVVEEDDDND-DNEEIGFVEDERRRRSALTGGRGGSGGGRVTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSR 120
           GCNADL+ ARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCR R
Sbjct: 61  GCNADLSCARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRR 120

Query: 121 LAGHNERRRKILPDFHGQSSTN 142
           LAGHNERRRKILPDFHGQSSTN
Sbjct: 121 LAGHNERRRKILPDFHGQSSTN 141

BLAST of IVF0005798 vs. NCBI nr
Match: KAA0052677.1 (squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK13147.1 squamosa promoter-binding protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 208 bits (530), Expect = 3.85e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60
           MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD
Sbjct: 1   MANSNDHSWEDMILDDDDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQAD 60

Query: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103
           GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR
Sbjct: 61  GCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103

BLAST of IVF0005798 vs. NCBI nr
Match: XP_023004048.1 (squamosa promoter-binding-like protein 3 [Cucurbita maxima])

HSP 1 Score: 199 bits (506), Expect = 5.99e-63
Identity = 99/142 (69.72%), Postives = 122/142 (85.92%), Query Frame = 0

Query: 1   MANSNDHSWEDMILDDDDDDD-NDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQA 60
           M NS D  W D + +++++++ +D +EVGFV++ER++R+ +++ R G GGGR++VARCQA
Sbjct: 1   MENSGDQGWGDPVEEEEEEEEEDDDDEVGFVEDERKKRA-VSSSRSGSGGGRTSVARCQA 60

Query: 61  DGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRS 120
           D CN DL GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQQCSRFH+VSEFD+TKRSCR 
Sbjct: 61  DSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRR 120

Query: 121 RLAGHNERRRKILPDFHGQSST 141
           RLAGHNERRRK LPDF GQSST
Sbjct: 121 RLAGHNERRRKNLPDFQGQSST 141

BLAST of IVF0005798 vs. TAIR 10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8 )

HSP 1 Score: 124.4 bits (311), Expect = 7.3e-29
Identity = 61/88 (69.32%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 43  GRGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS 102
           G  G     ST  RCQA+GCNADL+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCS
Sbjct: 175 GESGMANSLST-PRCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCS 234

Query: 103 RFHAVSEFDDTKRSCRSRLAGHNERRRK 131
           RFH +SEFD+ KRSCR RLA HN RRRK
Sbjct: 235 RFHLLSEFDNGKRSCRKRLADHNRRRRK 261

BLAST of IVF0005798 vs. TAIR 10
Match: AT3G60030.1 (squamosa promoter-binding protein-like 12 )

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-28
Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 47  GGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHA 106
           GGG  S    CQ D C ADL+  + YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH 
Sbjct: 117 GGGIPSRAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHV 176

Query: 107 VSEFDDTKRSCRSRLAGHNERRRKILPDFHGQSST 142
           + EFD+ KRSCR RLAGHN+RRRK  PD  G  ++
Sbjct: 177 LEEFDEGKRSCRRRLAGHNKRRRKANPDTIGNGTS 211

BLAST of IVF0005798 vs. TAIR 10
Match: AT1G53160.2 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-28
Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 0

Query: 17  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRH 76
           ++D + DT+E   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRH
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG------SLRLCQVDRCTADMKEAKLYHRRH 79

Query: 77  KVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK 131
           KVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR RLAGHNERRRK
Sbjct: 80  KVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRK 127

BLAST of IVF0005798 vs. TAIR 10
Match: AT1G53160.1 (squamosa promoter binding protein-like 4 )

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-28
Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 0

Query: 17  DDDDDNDTEEVGFVDNERRRRSGLTTGRGGGGGGRSTVARCQADGCNADLTGARPYHRRH 76
           ++D + DT+E   V  +R R S  +  RGG      ++  CQ D C AD+  A+ YHRRH
Sbjct: 20  EEDMETDTDEEEEVGRDRVRGSRGSINRGG------SLRLCQVDRCTADMKEAKLYHRRH 79

Query: 77  KVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRSRLAGHNERRRK 131
           KVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR RLAGHNERRRK
Sbjct: 80  KVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERRRK 127

BLAST of IVF0005798 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 56/90 (62.22%), Postives = 65/90 (72.22%), Query Frame = 0

Query: 44  RGGGGGGRSTVARCQADGCNADLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSR 103
           RGGG G    + RCQ +GC  DLT A+ Y+ RH+VC  H+K   V +AG+EQRFCQQCSR
Sbjct: 61  RGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSR 120

Query: 104 FHAVSEFDDTKRSCRSRLAGHNERRRKILP 134
           FH + EFD  KRSCR RLAGHNERRRK  P
Sbjct: 121 FHQLPEFDLEKRSCRRRLAGHNERRRKPQP 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A2YFT91.6e-2868.24Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. indica OX=39946... [more]
Q0DAE81.6e-2868.24Squamosa promoter-binding-like protein 10 OS=Oryza sativa subsp. japonica OX=399... [more]
Q2R3Y11.6e-2867.05Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japoni... [more]
Q387412.7e-2852.85Squamosa promoter-binding protein 1 OS=Antirrhinum majus OX=4151 GN=SBP1 PE=2 SV... [more]
Q8GXL31.0e-2769.32Squamosa promoter-binding-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=SPL8... [more]
Match NameE-valueIdentityDescription
A0A1S3AZN82.6e-74100.00squamosa promoter-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103484510 PE=4... [more]
A0A0A0KK743.4e-6690.14SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517960 PE... [more]
A0A5A7UDV92.6e-50100.00Squamosa promoter-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A6J1KYC67.1e-4869.72Squamosa promoter-binding-like protein OS=Cucurbita maxima OX=3661 GN=LOC1114974... [more]
A0A6J1EFR33.3e-4566.67Squamosa promoter-binding-like protein OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
Match NameE-valueIdentityDescription
XP_008439842.11.08e-97100.00PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo][more]
XP_004134953.14.97e-8790.14squamosa promoter-binding protein 1 [Cucumis sativus] >KGN49239.1 hypothetical p... [more]
XP_038880830.15.13e-8085.21squamosa promoter-binding protein 1-like [Benincasa hispida][more]
KAA0052677.13.85e-67100.00squamosa promoter-binding protein 1 [Cucumis melo var. makuwa] >TYK13147.1 squam... [more]
XP_023004048.15.99e-6369.72squamosa promoter-binding-like protein 3 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G02065.17.3e-2969.32squamosa promoter binding protein-like 8 [more]
AT3G60030.12.1e-2858.95squamosa promoter-binding protein-like 12 [more]
AT1G53160.22.8e-2857.02squamosa promoter binding protein-like 4 [more]
AT1G53160.12.8e-2857.02squamosa promoter binding protein-like 4 [more]
AT2G42200.11.8e-2762.22squamosa promoter binding protein-like 9 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036893SBP domain superfamilyGENE3D4.10.1100.10coord: 47..118
e-value: 4.8E-34
score: 118.3
IPR036893SBP domain superfamilySUPERFAMILY103612SBT domaincoord: 55..135
IPR004333SBP domainPFAMPF03110SBPcoord: 57..130
e-value: 6.1E-33
score: 113.0
IPR004333SBP domainPROSITEPS51141ZF_SBPcoord: 54..131
score: 31.684092
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
IPR044817Squamosa promoter-binding-like proteinPANTHERPTHR31251SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4coord: 40..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005798.1IVF0005798.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046872 metal ion binding