IVF0005751 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTTCTTCAACTCTTGCGTTTACCCACTTGGATCTACACAAAACAGGAAAAGAAAAAATGTCCGATGCAGAGAGAAAAACTGCCAACCCTGCGCCCACGAGGCTGCAGAGCCAGGCTCCGGCATCGATCGAGATAAAGAGGGTGCTGGATTGGAACGTGGTTATACCATTATTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATTCAGGGCCAGAGAAAGTGTTGTCAATGGCTGATAATAATGCGAGGGAGGAAAACAAAGGGCTAACCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCTGTCCCAAGGGCTAACGCCTTTGTGCCTGTGTGAATATTTCGTTTCTTCTCTTTTAACAATTATTGTTCTGCTTAA AACTTCTTCAACTCTTGCGTTTACCCACTTGGATCTACACAAAACAGGAAAAGAAAAAATGTCCGATGCAGAGAGAAAAACTGCCAACCCTGCGCCCACGAGGCTGCAGAGCCAGGCTCCGGCATCGATCGAGATAAAGAGGGTGCTGGATTGGAACGTGGTTATACCATTATTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATTCAGGGCCAGAGAAAGTGTTGTCAATGGCTGATAATAATGCGAGGGAGGAAAACAAAGGGCTAACCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCTGTCCCAAGGGCTAACGCCTTTGTGCCTGTGTGAATATTTCGTTTCTTCTCTTTTAACAATTATTGTTCTGCTTAA ATGTCCGATGCAGAGAGAAAAACTGCCAACCCTGCGCCCACGAGGCTGCAGAGCCAGGCTCCGGCATCGATCGAGATAAAGAGGGTGCTGGATTGGAACGTGGTTATACCATTATTATCCCCTCTTGTATCACCTTCGTCTTGTGGGAATTCAGGGCCAGAGAAAGTGTTGTCAATGGCTGATAATAATGCGAGGGAGGAAAACAAAGGGCTAACCTTTACCAAATGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCTGTCCCAAGGGCTAACGCCTTTGTGCCTGTGTGA MSDAERKTANPAPTRLQSQAPASIEIKRVLDWNVVIPLLSPLVSPSSCGNSGPEKVLSMADNNAREENKGLTFTKWQHPAAPFYYEPVPRANAFVPV Homology
BLAST of IVF0005751 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.8e-06 Identity = 35/88 (39.77%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of IVF0005751 vs. ExPASy TrEMBL
Match: A0A5D3D1A6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001320 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 6.3e-48 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of IVF0005751 vs. ExPASy TrEMBL
Match: A0A0A0L8D3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141830 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.3e-40 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of IVF0005751 vs. ExPASy TrEMBL
Match: A0A6J1E8H9 (AT-hook motif nuclear-localized protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111431828 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.8e-19 Identity = 55/87 (63.22%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of IVF0005751 vs. ExPASy TrEMBL
Match: A0A6J1CRZ0 (uncharacterized protein At4g14450, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111013769 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16 Identity = 57/106 (53.77%), Postives = 68/106 (64.15%), Query Frame = 0
BLAST of IVF0005751 vs. ExPASy TrEMBL
Match: A0A2P5A713 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_362290 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.9e-16 Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of IVF0005751 vs. NCBI nr
Match: KAA0049279.1 (hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa] >TYK17278.1 hypothetical protein E5676_scaffold434G001320 [Cucumis melo var. makuwa]) HSP 1 Score: 200 bits (508), Expect = 1.15e-64 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of IVF0005751 vs. NCBI nr
Match: KAE8650334.1 (hypothetical protein Csa_009641 [Cucumis sativus]) HSP 1 Score: 176 bits (445), Expect = 1.39e-51 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of IVF0005751 vs. NCBI nr
Match: XP_023526926.1 (AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 106 bits (264), Expect = 7.03e-25 Identity = 56/87 (64.37%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of IVF0005751 vs. NCBI nr
Match: XP_022924297.1 (AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata]) HSP 1 Score: 105 bits (261), Expect = 1.86e-24 Identity = 55/87 (63.22%), Postives = 62/87 (71.26%), Query Frame = 0
BLAST of IVF0005751 vs. NCBI nr
Match: KAG6582368.1 (AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018779.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102 bits (255), Expect = 1.34e-23 Identity = 57/97 (58.76%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of IVF0005751 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 6.1e-11 Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of IVF0005751 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 4.9e-08 Identity = 37/89 (41.57%), Postives = 44/89 (49.44%), Query Frame = 0
BLAST of IVF0005751 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 4.1e-07 Identity = 35/88 (39.77%), Postives = 45/88 (51.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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