IVF0005454 (gene) Melon (IVF77) v1

Overview


Name	IVF0005454
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	WD repeat-containing protein RUP2-like
Location	chr04: 95271 .. 96537 (+)
RNA-Seq Expression	IVF0005454
Synteny	IVF0005454

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACATCACACAGGTTTCCAAATAAGAAAAAAAAAAAAAAAAAGCGTAGTTGAATATTGGAGGGCGTAGATCGGTTCGAAAACCCCCAAATGTCGTGGTTTCAATTTCCTTTTTCCCTTCCACTCCTTATGAATGGGAAATGAGAAGCGTCTCCTCTCCCAGTTCCCCAACCCCACAAAACCAAAACCCAGAAAAACTCAAACAACAATCCCCCCTTCCATGCGAATGGGATTTCACCCTCGCCTCCGTCGTCTCCTCACCCACCAATTGCGCCGCTTCTGACACTCTCGGCGTTCTCGAATTCGACCCTTCCGATTCCCTCATAGCCACCGCCGGAATCGCTAGAAAAATTCGTGGCTACCGTCTTCATAATCTCCTGCCCCAAGACATTCACCATAACGCTACTACTATTACTCAATTGGACCACTCCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAGCCCAATGCTAACGCTCGAATCTTAGGCTCCGGCGATTACGATGGGGTGGTCACGGAGTACGATCTCGAGATGAAAGTACCGATTTTCGAACGGGATGAACATGGGGGCCGACGTGTCTGGAGTGTGGATTACTCAACAGTAGAGCCTGTAGTGGGGGCGTCCGGGTCAGACGATGGCACAGTGCAAGTATGGGATACGCGGTGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTAAGGAGTCCGGTTTGTTGCGTGGAATTCAACCCGTACGGAGGGGGGTTGGTGGCGGTTGGATGCGCGGACAGGAAAGCGTATGGGTACGACAGAAGGAAAATGAGGGAACCGGTAGTGGTATTCGAAGGGCATGGGAAGACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGCACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGCGGGGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAACGGGAGGAGCTTTGTGGGGTTGTCAGTGTGGAGGAAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGGTGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGGATGGGGTCGGGTTATGGGTTGGTCAGTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGACACAAGAAGAGGTCCTTTTGA

mRNA sequence

CCACATCACACAGGTTTCCAAATAAGAAAAAAAAAAAAAAAAAGCGTAGTTGAATATTGGAGGGCGTAGATCGGTTCGAAAACCCCCAAATGTCGTGGTTTCAATTTCCTTTTTCCCTTCCACTCCTTATGAATGGGAAATGAGAAGCGTCTCCTCTCCCAGTTCCCCAACCCCACAAAACCAAAACCCAGAAAAACTCAAACAACAATCCCCCCTTCCATGCGAATGGGATTTCACCCTCGCCTCCGTCGTCTCCTCACCCACCAATTGCGCCGCTTCTGACACTCTCGGCGTTCTCGAATTCGACCCTTCCGATTCCCTCATAGCCACCGCCGGAATCGCTAGAAAAATTCGTGGCTACCGTCTTCATAATCTCCTGCCCCAAGACATTCACCATAACGCTACTACTATTACTCAATTGGACCACTCCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAGCCCAATGCTAACGCTCGAATCTTAGGCTCCGGCGATTACGATGGGGTGGTCACGGAGTACGATCTCGAGATGAAAGTACCGATTTTCGAACGGGATGAACATGGGGGCCGACGTGTCTGGAGTGTGGATTACTCAACAGTAGAGCCTGTAGTGGGGGCGTCCGGGTCAGACGATGGCACAGTGCAAGTATGGGATACGCGGTGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTAAGGAGTCCGGTTTGTTGCGTGGAATTCAACCCGTACGGAGGGGGGTTGGTGGCGGTTGGATGCGCGGACAGGAAAGCGTATGGGTACGACAGAAGGAAAATGAGGGAACCGGTAGTGGTATTCGAAGGGCATGGGAAGACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGCACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGCGGGGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAACGGGAGGAGCTTTGTGGGGTTGTCAGTGTGGAGGAAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGGTGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGGATGGGGTCGGGTTATGGGTTGGTCAGTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGACACAAGAAGAGGTCCTTTTGA

Coding sequence (CDS)

ATGAGAAGCGTCTCCTCTCCCAGTTCCCCAACCCCACAAAACCAAAACCCAGAAAAACTCAAACAACAATCCCCCCTTCCATGCGAATGGGATTTCACCCTCGCCTCCGTCGTCTCCTCACCCACCAATTGCGCCGCTTCTGACACTCTCGGCGTTCTCGAATTCGACCCTTCCGATTCCCTCATAGCCACCGCCGGAATCGCTAGAAAAATTCGTGGCTACCGTCTTCATAATCTCCTGCCCCAAGACATTCACCATAACGCTACTACTATTACTCAATTGGACCACTCCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAGCCCAATGCTAACGCTCGAATCTTAGGCTCCGGCGATTACGATGGGGTGGTCACGGAGTACGATCTCGAGATGAAAGTACCGATTTTCGAACGGGATGAACATGGGGGCCGACGTGTCTGGAGTGTGGATTACTCAACAGTAGAGCCTGTAGTGGGGGCGTCCGGGTCAGACGATGGCACAGTGCAAGTATGGGATACGCGGTGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTAAGGAGTCCGGTTTGTTGCGTGGAATTCAACCCGTACGGAGGGGGGTTGGTGGCGGTTGGATGCGCGGACAGGAAAGCGTATGGGTACGACAGAAGGAAAATGAGGGAACCGGTAGTGGTATTCGAAGGGCATGGGAAGACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGCACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGCGGGGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAACGGGAGGAGCTTTGTGGGGTTGTCAGTGTGGAGGAAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGGTGGGGAGAGCCAATATGGGTAAAGGAATTTGATGGGGGGATGGGGTCGGGTTATGGGTTGGTCAGTAGTGTGTGTTGGAGGCAAGTGGGAGAGCAAGAATGCACCTTGGTAGCTGGCGGGTCGGATGGCGTTTTGCAAGTTTTTGTCGGACACAAGAAGAGGTCCTTTTGA

Protein sequence

MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKKRSF

Homology

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BLAST of IVF0005454 vs. ExPASy Swiss-Prot
Match: Q9FFA7 (WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 3.3e-126
Identity = 222/367 (60.49%), Postives = 278/367 (75.75%), Query Frame = 0


Query: 12  PQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIATAGIARKI 71
           P  Q  E+ +QQ     EWD +L++VVSS ++ +ASD +G +EFDP+D+++ATAGI+RKI
Sbjct: 6   PHKQQQEQAQQQEEARYEWDLSLSTVVSS-SSSSASDVIGAIEFDPTDNIVATAGISRKI 65

Query: 72  RGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDG 131
           R Y L +LL  +   + T ++ +D + A ++ ICTPAKLSSLRW+P +  R++GSGDYDG
Sbjct: 66  RFYGLPSLLRNNA-VSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYDG 125

Query: 132 VVTEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRCESGEC 191
           VV EYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC   E 
Sbjct: 126 VVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEES 185

Query: 192 VAVVQPS-VVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTY 251
           V VV+P+ + RS VCCVEF+P GG  VAVGCADRK Y YD RK+ +P +  +GH KTV+Y
Sbjct: 186 VGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSY 245

Query: 252 VKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGS 311
           V+F+DGGTVV+A TDG LK+W  E+G   RV+RTYEGHVN R+FVGLSVWR G L GCGS
Sbjct: 246 VRFLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGALFGCGS 305

Query: 312 EDKRVFVYDKRWGEPIWVKEFDG-GMGSGYG--LVSSVCWRQVGEQECTLVAGGSDGVLQ 371
           E+ RVFVYD+RWG+P+WV  F+  GM SG     VSSVCWRQ G  +CTLVAGGSDGVLQ
Sbjct: 306 ENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQ 365

Query: 372 VFVGHKK 373
           V+VG +K
Sbjct: 366 VYVGKRK 367

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BLAST of IVF0005454 vs. ExPASy Swiss-Prot
Match: Q9LTJ6 (WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 6.3e-109
Identity = 203/368 (55.16%), Postives = 257/368 (69.84%), Query Frame = 0


Query: 5   SSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIAT 64
           SS SS +P   N E + +     C+WD +L++VVSS +    SD +G +EFDP+  +IAT
Sbjct: 36  SSSSSSSPTIMNIENIPR-----CDWDLSLSAVVSSAS--TGSDAIGAIEFDPTGEIIAT 95

Query: 65  AGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARIL 124
            GIARKIR YRL +LL           ++ DH  AS+  ICTPAKLSSL+W+P+ + R++
Sbjct: 96  GGIARKIRSYRLSSLLE----------SRDDHVTASESYICTPAKLSSLKWRPDFSGRVI 155

Query: 125 GSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVE-PVVGASGSDDGTVQVWDTR 184
           GSGDYDGVVTEYD+E +VP+ ERDEHGGRR+WSVDY+     ++GASGSDDGTVQ+WD R
Sbjct: 156 GSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR 215

Query: 185 CESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHG 244
              G     V+P    + +C VEF+P+GG  +AVGCADR AY YD R++ +P++V +GH 
Sbjct: 216 -NGGTLEETVRPG-GGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHT 275

Query: 245 KTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGL 304
           KTVTY +F+D  T+V+ STDGSLK W  +   G RVVRTY GHVN R+FVGLSVWR GGL
Sbjct: 276 KTVTYARFMDSHTIVTGSTDGSLKQWDID--NGRRVVRTYRGHVNSRNFVGLSVWRHGGL 335

Query: 305 IGCGSEDKRVFVYDKRWGEPIWV--KEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSD 364
           +  GSE+ +VFVYDKRW EP+WV         GS    VSSVC RQV E  CTLVAGGSD
Sbjct: 336 VVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSD 382

Query: 365 GVLQVFVG 370
           G L++F G
Sbjct: 396 GALEIFSG 382

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BLAST of IVF0005454 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.7e-50
Identity = 118/331 (35.65%), Postives = 177/331 (53.47%), Query Frame = 0


Query: 46  ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLL--PQDIHHNATTITQLDHSRASDFC 105
           +++ +  +EFD  D L ATAG++R+I+ +    ++  P D H     +T           
Sbjct: 367 SANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMT----------- 426

Query: 106 ICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTV 165
             T +KLS L W   A  +I  S DY+G+VT + +  +  + E +EH  +R WSVD+S  
Sbjct: 427 --TRSKLSCLSWNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEH-EKRAWSVDFSRT 486

Query: 166 EPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRK 225
           +P +  SGSDD  V+VW T  E     A V    +++ +CCV++NP  G  +AVG AD  
Sbjct: 487 DPSMLVSGSDDCKVKVWCTNQE-----ASVLNIDMKANICCVKYNPGSGNYIAVGSADHH 546

Query: 226 AYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTY 285
            + YD R +  PV VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+
Sbjct: 547 IHYYDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQN---LPVRTF 606

Query: 286 EGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGY 345
            GH N ++FVGL+V  +   I CGSE   VFVY K   +P+    F      D    +G 
Sbjct: 607 RGHANEKNFVGLTV--RSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGS 666

Query: 346 GLVSSVCWRQVGEQECTLVAGGSDGVLQVFV 369
             +S+VCW+       T++   S G ++V V
Sbjct: 667 YFISAVCWK---SDRPTILTANSQGTIKVLV 669

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BLAST of IVF0005454 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 2.8e-48
Identity = 112/329 (34.04%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 46  ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCIC 105
           +++ +  +EFD  D L ATAG++R I+ +   +++ +        +            + 
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVE-----------MS 429

Query: 106 TPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEP 165
           T +KLS L W  +    I  S DY+G+VT +D+  +  + E +EH  +R WSVD+S  EP
Sbjct: 430 TRSKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEP 489

Query: 166 VVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAY 225
            +  SGSDD  V+VW TR E     A V    +++ +CCV++NP     +AVG AD   +
Sbjct: 490 SMLVSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIH 549

Query: 226 GYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEG 285
            YD R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ G
Sbjct: 550 YYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRG 609

Query: 286 HVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGL 345
           H N ++FVGL+V      + CGSE   V+VY K    P+    F      D    +G   
Sbjct: 610 HTNEKNFVGLTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYF 669

Query: 346 VSSVCWRQVGEQECTLVAGGSDGVLQVFV 369
           +S+VCW+       T++   S G ++V V
Sbjct: 670 ISAVCWK---SDSPTMLTANSQGTIKVLV 672

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BLAST of IVF0005454 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.0e-47
Identity = 118/333 (35.44%), Postives = 177/333 (53.15%), Query Frame = 0


Query: 46  ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLL--PQDIHHNATTITQLDHSRASDFC 105
           +S+ +  L FD    L ATAG+ +KI+ +  ++++   +DIH+                 
Sbjct: 533 SSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVE------------- 592

Query: 106 ICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTV 165
           +   +KLSSL W     ++I  S ++DGVV  +D+     + E  EH  +RVWS+D S+ 
Sbjct: 593 LAGRSKLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSA 652

Query: 166 EPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRK 225
           +P + ASGSDDGTV++W      G  +  ++    ++ VCCV+F    G  +A G AD K
Sbjct: 653 DPTLLASGSDDGTVKLWS--INQGVSIGTIK---TKANVCCVQFPSDSGRSLAFGSADHK 712

Query: 226 AYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMW---KTEEGGGARVV 285
            Y YD R  + P+    GH KTV+YVKFVD  T+VS+STD +LK+W    +  G     +
Sbjct: 713 VYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPL 772

Query: 286 RTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG-------GM 345
            ++ GH N ++FVGLSV    G I  GSE   VFVY K +  P+    F+         +
Sbjct: 773 HSFTGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEV 832

Query: 346 GSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV 367
                 +SS+CWR    Q  TLVA  S+G +++
Sbjct: 833 DDASQFISSICWR---GQSSTLVAANSNGNIKI 840

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BLAST of IVF0005454 vs. ExPASy TrEMBL
Match: A0A5A7T553 (WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00140 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 6.8e-223
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 60
           MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS
Sbjct: 1   MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 60

Query: 61  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 120
           LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN
Sbjct: 61  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 120

Query: 121 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 180
           ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW
Sbjct: 121 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 180

Query: 181 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 240
           DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE
Sbjct: 181 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 240

Query: 241 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 300
           GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK
Sbjct: 241 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 300

Query: 301 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGS 360
           GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGS
Sbjct: 301 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGS 360

Query: 361 DGVLQVFVGHKKRSF 376
           DGVLQVFVGHKKRSF
Sbjct: 361 DGVLQVFVGHKKRSF 375

[Close]

BLAST of IVF0005454 vs. ExPASy TrEMBL
Match: A0A0A0LHK2 (Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 1.1e-207
Identity = 359/383 (93.73%), Postives = 364/383 (95.04%), Query Frame = 0


Query: 3   SVSSPSSPTPQNQNPEKLKQQSPLP--CEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 62
           S+SSPSSPTPQ QN EKL QQSP P  CEWDFTLASVVSSPTNCAASDTLGV+EFDPSDS
Sbjct: 4   SLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDS 63

Query: 63  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 122
           LIATAGIARKIRGYRLHNLLPQDI HNA TITQLDH+RASDFCICTPAKLSSLRWKPNAN
Sbjct: 64  LIATAGIARKIRGYRLHNLLPQDIDHNA-TITQLDHTRASDFCICTPAKLSSLRWKPNAN 123

Query: 123 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 182
            RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW
Sbjct: 124 GRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 183

Query: 183 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 242
           DTRCESGECVAVVQPSVVRS VCCVEFNP+GGGLVAVGCADRKAYGYDRRKMREPVVVFE
Sbjct: 184 DTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFE 243

Query: 243 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 302
           GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWR+
Sbjct: 244 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRE 303

Query: 303 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG--------GMGSGYGLVSSVCWRQVGEQE 362
           GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDG        GMGSGYGLVSSVCWRQVGEQE
Sbjct: 304 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQVGEQE 363

Query: 363 CTLVAGGSDGVLQVFVGHKKRSF 376
           CTLVAGGSDGVLQVFVGHKKRSF
Sbjct: 364 CTLVAGGSDGVLQVFVGHKKRSF 385

[Close]

BLAST of IVF0005454 vs. ExPASy TrEMBL
Match: A0A6J1GKZ5 (WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC111455289 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.9e-170
Identity = 297/359 (82.73%), Postives = 316/359 (88.02%), Query Frame = 0


Query: 22  QQSPLPCEWDFTLASVVSSPTNCA-ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLL 81
           + +PL  EW F+LASVVSS +    ASDTLGV+EFDPSDSLIATAGIARKIRGY L NLL
Sbjct: 4   ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 82  PQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEM 141
           P D      T+  LDHSRAS+FCICTPAKLSSLRWKP A  RILGSGDYDGVV EYDLE 
Sbjct: 64  PHD-----GTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEK 123

Query: 142 KVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRS 201
           KVP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVVRS
Sbjct: 124 KVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRS 183

Query: 202 PVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSA 261
           PVCCVEFNPYGG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSA
Sbjct: 184 PVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSA 243

Query: 262 STDGSLKMWKTEE----GGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVY 321
           STDGSLKMWK EE    GGGARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVY
Sbjct: 244 STDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVY 303

Query: 322 DKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKKRSF 376
           DKRWGE +WV+EFD  +GSGYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG KKRSF
Sbjct: 304 DKRWGEAVWVEEFD-RVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 356

[Close]

BLAST of IVF0005454 vs. ExPASy TrEMBL
Match: A0A6J1I327 (WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470535 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.8e-167
Identity = 293/358 (81.84%), Postives = 313/358 (87.43%), Query Frame = 0


Query: 22  QQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLLP 81
           + +PL  EW F+LASVVSS     ASDTLGV+EFDPSDSLIATAGIARKIRGY L +LLP
Sbjct: 4   EPTPLRREWSFSLASVVSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSSLLP 63

Query: 82  QDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMK 141
            D      T+  LDHSRA +FCICTPAKLSSLRWKP    RILGSGDYDGVV EYDLE K
Sbjct: 64  HD-----GTVALLDHSRACEFCICTPAKLSSLRWKPGGGGRILGSGDYDGVVMEYDLEKK 123

Query: 142 VPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSP 201
           VP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPS+VRSP
Sbjct: 124 VPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSP 183

Query: 202 VCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSAS 261
           VCCVEFNPYGG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSAS
Sbjct: 184 VCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSAS 243

Query: 262 TDGSLKMWKTEEG--GGAR--VVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYD 321
           TDGSLKMWK EEG  GGAR  VVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYD
Sbjct: 244 TDGSLKMWKAEEGGDGGARAGVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYD 303

Query: 322 KRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKKRSF 376
           KRWGE +WV+EFD  +GSGYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG KKRSF
Sbjct: 304 KRWGEAVWVEEFD-RVGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 355

[Close]

BLAST of IVF0005454 vs. ExPASy TrEMBL
Match: A0A6P9F4N4 (WD repeat-containing protein RUP2 OS=Juglans regia OX=51240 GN=LOC108998670 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.5e-142
Identity = 242/362 (66.85%), Postives = 287/362 (79.28%), Query Frame = 0


Query: 13  QNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIATAGIARKIR 72
           + +  E+ ++++   CEW+F L++ VSS T  A SDTLGV+EFDPSDS +AT GIARKIR
Sbjct: 40  EKEEEEEEEEETRAICEWEFNLSTTVSSSTAGAVSDTLGVIEFDPSDSFVATGGIARKIR 99

Query: 73  GYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDGV 132
            Y L +LLPQ    N T  T LDH+ A +F ICTPAKLSS+RWKP +  R+LGSGDYDGV
Sbjct: 100 IYSLRSLLPQGERSN-TASTLLDHASACEFYICTPAKLSSMRWKPGSGGRVLGSGDYDGV 159

Query: 133 VTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAV 192
           V EYDLE ++PIFERDEHGGRRVWSVDYS  +PV+GASGSDDGT+Q+WD RCE G CV  
Sbjct: 160 VMEYDLERRMPIFERDEHGGRRVWSVDYSHCDPVIGASGSDDGTMQMWDPRCEGGRCVGT 219

Query: 193 VQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFV 252
           VQPSV RSPVCCVEFNP  G L+AVGCADRKAYGYD R+M +PVVVF+GH KTVTYV+F+
Sbjct: 220 VQPSVGRSPVCCVEFNPVAGALIAVGCADRKAYGYDIRRMADPVVVFDGHSKTVTYVRFL 279

Query: 253 DGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKR 312
           D   +VSA+TDG LK+W   +   +RV+RTY+GHVN R+FVGLSVWR GGL GCGSE+ +
Sbjct: 280 DAQMIVSAATDGCLKLWNIND---SRVIRTYKGHVNNRNFVGLSVWRNGGLFGCGSENNQ 339

Query: 313 VFVYDKRWGEPIWVKEFD--GGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGH 372
           V+VYD RWGEPIWV  F+     G  YG VSSVCWRQVG++ CTLVAGGSDGVLQVFVG 
Sbjct: 340 VYVYDLRWGEPIWVHGFEPVSRAGREYGFVSSVCWRQVGDESCTLVAGGSDGVLQVFVGK 397

[Close]

BLAST of IVF0005454 vs. NCBI nr
Match: KAA0038490.1 (WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 774 bits (1998), Expect = 1.33e-282
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 60
           MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS
Sbjct: 1   MRSVSSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 60

Query: 61  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 120
           LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN
Sbjct: 61  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 120

Query: 121 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 180
           ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW
Sbjct: 121 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 180

Query: 181 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 240
           DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE
Sbjct: 181 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 240

Query: 241 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 300
           GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK
Sbjct: 241 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 300

Query: 301 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGS 360
           GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGS
Sbjct: 301 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGS 360

Query: 361 DGVLQVFVGHKKRSF 375
           DGVLQVFVGHKKRSF
Sbjct: 361 DGVLQVFVGHKKRSF 375

[Close]

BLAST of IVF0005454 vs. NCBI nr
Match: XP_004148378.3 (LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus])

HSP 1 Score: 723 bits (1865), Expect = 3.64e-262
Identity = 359/383 (93.73%), Postives = 363/383 (94.78%), Query Frame = 0


Query: 3   SVSSPSSPTPQNQNPEKLKQQSPLP--CEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 62
           S+SSPSSPTPQ QN EKL QQSP P  CEWDFTLASVVSSPTNCAASDTLGV+EFDPSDS
Sbjct: 4   SLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDS 63

Query: 63  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 122
           LIATAGIARKIRGYRLHNLLPQDI HNAT ITQLDH+RASDFCICTPAKLSSLRWKPNAN
Sbjct: 64  LIATAGIARKIRGYRLHNLLPQDIDHNAT-ITQLDHTRASDFCICTPAKLSSLRWKPNAN 123

Query: 123 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 182
            RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW
Sbjct: 124 GRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 183

Query: 183 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 242
           DTRCESGECVAVVQPSVVRS VCCVEFNP+GGGLVAVGCADRKAYGYDRRKMREPVVVFE
Sbjct: 184 DTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFE 243

Query: 243 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 302
           GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWR 
Sbjct: 244 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRX 303

Query: 303 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGG--------MGSGYGLVSSVCWRQVGEQE 362
           GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGG        MGSGYGLVSSVCWRQVGEQE
Sbjct: 304 GGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGVGVGVGVGMGSGYGLVSSVCWRQVGEQE 363

Query: 363 CTLVAGGSDGVLQVFVGHKKRSF 375
           CTLVAGGSDGVLQVFVGHKKRSF
Sbjct: 364 CTLVAGGSDGVLQVFVGHKKRSF 385

[Close]

BLAST of IVF0005454 vs. NCBI nr
Match: XP_038887335.1 (WD repeat-containing protein RUP2-like [Benincasa hispida])

HSP 1 Score: 644 bits (1661), Expect = 2.93e-231
Identity = 326/380 (85.79%), Postives = 343/380 (90.26%), Query Frame = 0


Query: 1   MRSVSSPSSPTPQNQNPEK-----LKQQSPLP--CEWDFTLASVVSSPTNC-AASDTLGV 60
           M+S+ +P+SP  QNQNPEK     L+Q    P  CEWDFTLA++VSS +   AASDTLGV
Sbjct: 1   MKSLCTPNSP--QNQNPEKQLHNKLQQNETTPPRCEWDFTLAALVSSSSAIGAASDTLGV 60

Query: 61  LEFDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSS 120
           +EFDPSDSLIATAGIARKIRGYRLHNLLP++IH+   TI QLDHSRAS+FCICTPAKLSS
Sbjct: 61  VEFDPSDSLIATAGIARKIRGYRLHNLLPENIHNG--TINQLDHSRASEFCICTPAKLSS 120

Query: 121 LRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGS 180
           LRWKP  N RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYS V+PVVGASGS
Sbjct: 121 LRWKPGVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSMVDPVVGASGS 180

Query: 181 DDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKM 240
           DDGTVQVWDTRC+ GECVAVVQPSVVRSPVCCVEFNPYGG LVAVGCADRKAYGYDRRKM
Sbjct: 181 DDGTVQVWDTRCDGGECVAVVQPSVVRSPVCCVEFNPYGGALVAVGCADRKAYGYDRRKM 240

Query: 241 REPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSF 300
           REPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE   ARVVRTYEGHVNGRSF
Sbjct: 241 REPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE---ARVVRTYEGHVNGRSF 300

Query: 301 VGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQE 360
           VGLSVWR GGLIGCGSEDKRVFVYDKRWGEPIWVKEFD  +GSGYGLVSSVCWRQVGE E
Sbjct: 301 VGLSVWRNGGLIGCGSEDKRVFVYDKRWGEPIWVKEFDR-VGSGYGLVSSVCWRQVGEHE 360

Query: 361 CTLVAGGSDGVLQVFVGHKK 372
           CTLVAGGSDGVLQVFVG K+
Sbjct: 361 CTLVAGGSDGVLQVFVGQKR 372

[Close]

BLAST of IVF0005454 vs. NCBI nr
Match: XP_022952662.1 (WD repeat-containing protein RUP2-like [Cucurbita moschata])

HSP 1 Score: 599 bits (1544), Expect = 9.94e-214
Identity = 297/359 (82.73%), Postives = 316/359 (88.02%), Query Frame = 0


Query: 22  QQSPLPCEWDFTLASVVSSPTNCA-ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLL 81
           + +PL  EW F+LASVVSS +    ASDTLGV+EFDPSDSLIATAGIARKIRGY L NLL
Sbjct: 4   ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 82  PQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEM 141
           P D      T+  LDHSRAS+FCICTPAKLSSLRWKP A  RILGSGDYDGVV EYDLE 
Sbjct: 64  PHD-----GTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEK 123

Query: 142 KVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRS 201
           KVP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVVRS
Sbjct: 124 KVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRS 183

Query: 202 PVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSA 261
           PVCCVEFNPYGG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSA
Sbjct: 184 PVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSA 243

Query: 262 STDGSLKMWKTEEGG----GARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVY 321
           STDGSLKMWK EEGG    GARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVY
Sbjct: 244 STDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVY 303

Query: 322 DKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKKRSF 375
           DKRWGE +WV+EFD  +GSGYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG KKRSF
Sbjct: 304 DKRWGEAVWVEEFDR-VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKKRSF 356

[Close]

BLAST of IVF0005454 vs. NCBI nr
Match: KAG6571808.1 (WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011503.1 WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 595 bits (1535), Expect = 2.33e-212
Identity = 295/359 (82.17%), Postives = 315/359 (87.74%), Query Frame = 0


Query: 22  QQSPLPCEWDFTLASVVSSPTNCA-ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLL 81
           + +PL  EW F+LASVVSS +    ASDTLGV+EFDPSDSLIATAGIARKIRGY L NLL
Sbjct: 4   ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL 63

Query: 82  PQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEM 141
           P D      T+  LDHSRAS+FCICTPAKLSSLRWKP A  RILGSGDYDGVV EYDLE 
Sbjct: 64  PND-----GTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEK 123

Query: 142 KVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRS 201
           KVP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPS+VRS
Sbjct: 124 KVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRS 183

Query: 202 PVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSA 261
           PVCCVEFNPYGG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSA
Sbjct: 184 PVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSA 243

Query: 262 STDGSLKMWKTEEGG----GARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVY 321
           STDGSLKMWK EEGG    GARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVY
Sbjct: 244 STDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVY 303

Query: 322 DKRWGEPIWVKEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKKRSF 375
           DKRWGE +WV+EFD  +GSGYGLVSSVCWRQVGE ECTLVAGGSDGVL+VFVG K RSF
Sbjct: 304 DKRWGEAVWVEEFDR-VGSGYGLVSSVCWRQVGEDECTLVAGGSDGVLKVFVGEKTRSF 356

[Close]

BLAST of IVF0005454 vs. TAIR 10
Match: AT5G23730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 453.0 bits (1164), Expect = 2.4e-127
Identity = 222/367 (60.49%), Postives = 278/367 (75.75%), Query Frame = 0


Query: 12  PQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIATAGIARKI 71
           P  Q  E+ +QQ     EWD +L++VVSS ++ +ASD +G +EFDP+D+++ATAGI+RKI
Sbjct: 6   PHKQQQEQAQQQEEARYEWDLSLSTVVSS-SSSSASDVIGAIEFDPTDNIVATAGISRKI 65

Query: 72  RGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARILGSGDYDG 131
           R Y L +LL  +   + T ++ +D + A ++ ICTPAKLSSLRW+P +  R++GSGDYDG
Sbjct: 66  RFYGLPSLLRNNA-VSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYDG 125

Query: 132 VVTEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRCESGEC 191
           VV EYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC   E 
Sbjct: 126 VVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEES 185

Query: 192 VAVVQPS-VVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTY 251
           V VV+P+ + RS VCCVEF+P GG  VAVGCADRK Y YD RK+ +P +  +GH KTV+Y
Sbjct: 186 VGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSY 245

Query: 252 VKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGLIGCGS 311
           V+F+DGGTVV+A TDG LK+W  E+G   RV+RTYEGHVN R+FVGLSVWR G L GCGS
Sbjct: 246 VRFLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGALFGCGS 305

Query: 312 EDKRVFVYDKRWGEPIWVKEFDG-GMGSGYG--LVSSVCWRQVGEQECTLVAGGSDGVLQ 371
           E+ RVFVYD+RWG+P+WV  F+  GM SG     VSSVCWRQ G  +CTLVAGGSDGVLQ
Sbjct: 306 ENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQ 365

Query: 372 VFVGHKK 373
           V+VG +K
Sbjct: 366 VYVGKRK 367

[Close]

BLAST of IVF0005454 vs. TAIR 10
Match: AT5G52250.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 395.6 bits (1015), Expect = 4.5e-110
Identity = 203/368 (55.16%), Postives = 257/368 (69.84%), Query Frame = 0


Query: 5   SSPSSPTPQNQNPEKLKQQSPLPCEWDFTLASVVSSPTNCAASDTLGVLEFDPSDSLIAT 64
           SS SS +P   N E + +     C+WD +L++VVSS +    SD +G +EFDP+  +IAT
Sbjct: 36  SSSSSSSPTIMNIENIPR-----CDWDLSLSAVVSSAS--TGSDAIGAIEFDPTGEIIAT 95

Query: 65  AGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNANARIL 124
            GIARKIR YRL +LL           ++ DH  AS+  ICTPAKLSSL+W+P+ + R++
Sbjct: 96  GGIARKIRSYRLSSLLE----------SRDDHVTASESYICTPAKLSSLKWRPDFSGRVI 155

Query: 125 GSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVE-PVVGASGSDDGTVQVWDTR 184
           GSGDYDGVVTEYD+E +VP+ ERDEHGGRR+WSVDY+     ++GASGSDDGTVQ+WD R
Sbjct: 156 GSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR 215

Query: 185 CESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHG 244
              G     V+P    + +C VEF+P+GG  +AVGCADR AY YD R++ +P++V +GH 
Sbjct: 216 -NGGTLEETVRPG-GGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHT 275

Query: 245 KTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRKGGL 304
           KTVTY +F+D  T+V+ STDGSLK W  +   G RVVRTY GHVN R+FVGLSVWR GGL
Sbjct: 276 KTVTYARFMDSHTIVTGSTDGSLKQWDID--NGRRVVRTYRGHVNSRNFVGLSVWRHGGL 335

Query: 305 IGCGSEDKRVFVYDKRWGEPIWV--KEFDGGMGSGYGLVSSVCWRQVGEQECTLVAGGSD 364
           +  GSE+ +VFVYDKRW EP+WV         GS    VSSVC RQV E  CTLVAGGSD
Sbjct: 336 VVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSD 382

Query: 365 GVLQVFVG 370
           G L++F G
Sbjct: 396 GALEIFSG 382

[Close]

BLAST of IVF0005454 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-49
Identity = 112/329 (34.04%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 46  ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCIC 105
           +++ +  +EFD  D L ATAG++R I+ +   +++ +        +            + 
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVE-----------MS 429

Query: 106 TPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEP 165
           T +KLS L W  +    I  S DY+G+VT +D+  +  + E +EH  +R WSVD+S  EP
Sbjct: 430 TRSKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEP 489

Query: 166 VVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAY 225
            +  SGSDD  V+VW TR E     A V    +++ +CCV++NP     +AVG AD   +
Sbjct: 490 SMLVSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIH 549

Query: 226 GYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEG 285
            YD R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ G
Sbjct: 550 YYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRG 609

Query: 286 HVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF------DGGMGSGYGL 345
           H N ++FVGL+V      + CGSE   V+VY K    P+    F      D    +G   
Sbjct: 610 HTNEKNFVGLTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYF 669

Query: 346 VSSVCWRQVGEQECTLVAGGSDGVLQVFV 369
           +S+VCW+       T++   S G ++V V
Sbjct: 670 ISAVCWK---SDSPTMLTANSQGTIKVLV 672

[Close]

BLAST of IVF0005454 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 181.8 bits (460), Expect = 1.0e-45
Identity = 111/333 (33.33%), Postives = 175/333 (52.55%), Query Frame = 0


Query: 46  ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLLP--QDIHHNATTITQLDHSRASDFC 105
           +S+ +  + FD      ATAG+ +KI+ +   +++   +DIH+                 
Sbjct: 483 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVE------------- 542

Query: 106 ICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTV 165
           + + +KLS + W     +++  S +++GVV  +D+     + E  EH  +RVWS+DYS+ 
Sbjct: 543 LASRSKLSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEH-EKRVWSIDYSSA 602

Query: 166 EPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRK 225
           +P + ASGSDDG+V++W      G  +  ++    ++ +CCV+F    G  +A G AD K
Sbjct: 603 DPTLLASGSDDGSVKLWS--INQGVSIGTIK---TKANICCVQFPSETGRSLAFGSADHK 662

Query: 226 AYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTE---EGGGARVV 285
            Y YD R  + P+    GH KTV+YV+FVD  T+VS+STD +LK+W       G     +
Sbjct: 663 VYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPL 722

Query: 286 RTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF-------DGGM 345
            ++ GH N ++FVGLSV    G I  GSE   VFVY K +  P+   +F       +  +
Sbjct: 723 HSFMGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEV 782

Query: 346 GSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV 367
                 +SSVCWR    Q  TLVA  S G +++
Sbjct: 783 DDASQFISSVCWR---GQSSTLVAANSTGNIKI 790

[Close]

BLAST of IVF0005454 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 181.8 bits (460), Expect = 1.0e-45
Identity = 111/333 (33.33%), Postives = 175/333 (52.55%), Query Frame = 0


Query: 46  ASDTLGVLEFDPSDSLIATAGIARKIRGYRLHNLLP--QDIHHNATTITQLDHSRASDFC 105
           +S+ +  + FD      ATAG+ +KI+ +   +++   +DIH+                 
Sbjct: 483 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVE------------- 542

Query: 106 ICTPAKLSSLRWKPNANARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTV 165
           + + +KLS + W     +++  S +++GVV  +D+     + E  EH  +RVWS+DYS+ 
Sbjct: 543 LASRSKLSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEH-EKRVWSIDYSSA 602

Query: 166 EPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRK 225
           +P + ASGSDDG+V++W      G  +  ++    ++ +CCV+F    G  +A G AD K
Sbjct: 603 DPTLLASGSDDGSVKLWS--INQGVSIGTIK---TKANICCVQFPSETGRSLAFGSADHK 662

Query: 226 AYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTE---EGGGARVV 285
            Y YD R  + P+    GH KTV+YV+FVD  T+VS+STD +LK+W       G     +
Sbjct: 663 VYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPL 722

Query: 286 RTYEGHVNGRSFVGLSVWRKGGLIGCGSEDKRVFVYDKRWGEPIWVKEF-------DGGM 345
            ++ GH N ++FVGLSV    G I  GSE   VFVY K +  P+   +F       +  +
Sbjct: 723 HSFMGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEV 782

Query: 346 GSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQV 367
                 +SSVCWR    Q  TLVA  S G +++
Sbjct: 783 DDASQFISSVCWR---GQSSTLVAANSTGNIKI 790

The following BLAST results are available for this feature:

BLAST of IVF0005454 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA7	3.3e-126	60.49	WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 S...	[more]
Q9LTJ6	6.3e-109	55.16	WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 S...	[more]
P93471	8.7e-50	35.65	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
P43254	2.8e-48	34.04	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
Q9LJR3	9.0e-47	35.44	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1	[more]

BLAST of IVF0005454 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T553	6.8e-223	100.00	WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LHK2	1.1e-207	93.73	Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV...	[more]
A0A6J1GKZ5	3.9e-170	82.73	WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I327	1.8e-167	81.84	WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC1114705...	[more]
A0A6P9F4N4	4.5e-142	66.85	WD repeat-containing protein RUP2 OS=Juglans regia OX=51240 GN=LOC108998670 PE=4...	[more]

BLAST of IVF0005454 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038490.1	1.33e-282	100.00	WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]	[more]
XP_004148378.3	3.64e-262	93.73	LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus]	[more]
XP_038887335.1	2.93e-231	85.79	WD repeat-containing protein RUP2-like [Benincasa hispida]	[more]
XP_022952662.1	9.94e-214	82.73	WD repeat-containing protein RUP2-like [Cucurbita moschata]	[more]
KAG6571808.1	2.33e-212	82.17	WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0005454 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23730.1	2.4e-127	60.49	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52250.1	4.5e-110	55.16	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	2.0e-49	34.04	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G53090.1	1.0e-45	33.33	SPA1-related 4	[more]
AT1G53090.2	1.0e-45	33.33	SPA1-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 232..270 e-value: 1.7E-5 score: 34.3 coord: 140..181 e-value: 0.036 score: 23.2 coord: 276..317 e-value: 1.2 score: 16.6 coord: 31..75 e-value: 320.0 score: 1.2 coord: 186..228 e-value: 0.027 score: 23.6 coord: 100..137 e-value: 46.0 score: 6.5 coord: 322..368 e-value: 170.0 score: 2.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 234..270 e-value: 6.5E-4 score: 20.5 coord: 149..181 e-value: 0.0075 score: 17.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 169..183 score: 8.770704
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 239..279 score: 10.608706
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 31..368 e-value: 1.6E-82 score: 279.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 239..274 score: 8.676514
IPR044616	WD repeat-containing protein RUP1/2	PANTHER	PTHR45389	WD REPEAT-CONTAINING PROTEIN RUP1	coord: 9..373
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 51..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005454.1	IVF0005454.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010224	response to UV-B
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding