Homology
BLAST of IVF0005421 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 3.0e-10
Identity = 31/92 (33.70%), Postives = 53/92 (57.61%), Query Frame = 0
Query: 67 LPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWASVFVLPA 126
+P+L R+ + + +++R++SR+ W + LSFAGRL L +VL S V+ S +LP
Sbjct: 1 MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60
Query: 127 YVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV 159
+ N +D++ R++LW E + V W V
Sbjct: 61 SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKV 92
BLAST of IVF0005421 vs. ExPASy TrEMBL
Match:
A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1)
HSP 1 Score: 658.7 bits (1698), Expect = 1.5e-185
Identity = 325/383 (84.86%), Postives = 326/383 (85.12%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL
Sbjct: 452 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 511
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS
Sbjct: 512 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 571
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV---------------------- 180
VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV
Sbjct: 572 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIAST 631
Query: 181 -----------------------------------LGKSWCLRAILRKREKLKHLVRMKV 240
+GKSWCLRAILRKREKLKHLVRMKV
Sbjct: 632 LKILWLMLTNSGSLWVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKV 691
Query: 241 GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID 300
GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID
Sbjct: 692 GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID 751
Query: 301 LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF 327
LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF
Sbjct: 752 LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF 811
BLAST of IVF0005421 vs. ExPASy TrEMBL
Match:
A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)
HSP 1 Score: 547.4 bits (1409), Expect = 4.7e-152
Identity = 292/437 (66.82%), Postives = 305/437 (69.79%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAA+E SI FIRECLQKFGE SGLFANPRKSSIFV GVNNE ASHLA C+G
Sbjct: 657 MIFCAADELSISFIRECLQKFGEFSGLFANPRKSSIFVVGVNNEYASHLAACIGC--SWK 716
Query: 61 SVRYLGLPLLA-GRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWA 120
S L P + LRS D APLIQRITSRIRSWTARVLSFAGRLQLV SVLRS QVYWA
Sbjct: 717 SPCSLSWPSSSHWWLRSIDCAPLIQRITSRIRSWTARVLSFAGRLQLVRSVLRSLQVYWA 776
Query: 121 SVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV--------------------- 180
SVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV
Sbjct: 777 SVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIAN 836
Query: 181 ---------------------------------LGKSWCLRAILRKREKLKHLVRMKVGN 240
+G+SWCLRAILRKREK+KH
Sbjct: 837 TLKILLTNLGSLWVAWMEAYILKGKSLWDVDSRVGRSWCLRAILRKREKMKH-------- 896
Query: 241 GNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLW 300
VGERV+YDAASRR+A+LSDFIDP+GEWLWPRVSLELIDLW
Sbjct: 897 -------------------HVGERVLYDAASRREAKLSDFIDPNGEWLWPRVSLELIDLW 956
Query: 301 ERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHFFC 360
ERVQEVSPCLSVSDSWVWVPGR+GGFSIASAWEA+ PRGGRVLWDGLLWGGGNI KH FC
Sbjct: 957 ERVQEVSPCLSVSDSWVWVPGRQGGFSIASAWEAICPRGGRVLWDGLLWGGGNIPKHSFC 1016
Query: 361 AWLAIKDRLGTIDRLHRWDSS-------------SRDHLFFSCSFGGGGDVWSRVLRIMG 370
AWLAIKDRL T DRLHRWDSS SRDHLFFSC F GGDVWSRV +IM
Sbjct: 1017 AWLAIKDRLDTRDRLHRWDSSIPLSCILCQGGVESRDHLFFSCPF--GGDVWSRVFQIME 1062
BLAST of IVF0005421 vs. ExPASy TrEMBL
Match:
A0A5A7TKU4 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00080 PE=4 SV=1)
HSP 1 Score: 540.0 bits (1390), Expect = 7.5e-150
Identity = 271/412 (65.78%), Postives = 305/412 (74.03%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFC A+EPS+ F+RE LQKFGEL GL+AN K SIFVAG NE AS LA MGF+ GNL
Sbjct: 704 MIFCVADEPSLSFVRETLQKFGELLGLYANLGKISIFVAGSTNEVASRLAANMGFILGNL 763
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
VRYL LPLL GRLR +D APLIQRITSRIRSW ARVLSFAGR QLV SV RS QVYWAS
Sbjct: 764 PVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNARVLSFAGRFQLVRSVFRSLQVYWAS 823
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKE----------------EGRGGIKVAWVDV------ 180
VFVLP+ VHN+VDKILRSYLWR ++ + VAWV+
Sbjct: 824 VFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTLKILWLLTSLSSLWVAWVEAYILKRK 883
Query: 181 --------LGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERV 240
+ +SWCLRAILRKR+ LK+ V ++VG+G+S RVWLDPWL ILEQVGERV
Sbjct: 884 SLWAVDSGVCRSWCLRAILRKRDSLKYHVWIEVGDGSSCRVWLDPWLQGVPILEQVGERV 943
Query: 241 MYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERVQEVSPCLSVSDSWVWVPGRRGG 300
+YDAASRR+ARLS+FI PDGEW WPRVS+ELIDLW+RVQ V PCLSV D WVWVPG +GG
Sbjct: 944 LYDAASRREARLSEFIGPDGEWQWPRVSIELIDLWDRVQAVRPCLSVRDRWVWVPGHQGG 1003
Query: 301 FSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRWDSS---- 360
FSIASA + +RPRGGRV W GLLWGGGN+ KH FCAWL IK++LGT DRLHRWDSS
Sbjct: 1004 FSIASALDTIRPRGGRVRWVGLLWGGGNVPKHSFCAWLTIKNKLGTRDRLHRWDSSVPMS 1063
Query: 361 ---------SRDHLFFSCSFGGGGDVWSRVLRIMGSSHRIGHWRVELSWICH 370
SRDHLFFSC F G DVWSRVL++M SSHRI +W VELSWICH
Sbjct: 1064 FILCQGGVESRDHLFFSCPF--GRDVWSRVLQVMASSHRIRYWGVELSWICH 1113
BLAST of IVF0005421 vs. ExPASy TrEMBL
Match:
A0A5D3CLU1 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00420 PE=4 SV=1)
HSP 1 Score: 526.6 bits (1355), Expect = 8.6e-146
Identity = 275/390 (70.51%), Postives = 289/390 (74.10%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAA+EPSIRFIRECLQKFGELSGLFANPRKS IFVAGVNNENAS LA CMGFVRGNL
Sbjct: 384 MIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNL 443
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
VRYLGLPLL GRLRSND AP+IQRITSRIRSW ARVLSFAGRLQLV SVLRS QVYWAS
Sbjct: 444 PVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWAS 503
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEE---------------GRGGIKVAWVDV------- 180
VFVLPAYVHNEVDKILRSYLWR G + VAWV+
Sbjct: 504 VFVLPAYVHNEVDKILRSYLWRDGPSWNIASTLKILWLMLTSLGSLWVAWVEAYILKGRS 563
Query: 181 -------LGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVM 240
+G+SWCLRAILR GAILEQVGERV+
Sbjct: 564 LWDVDSRVGRSWCLRAILR-----------------------------GAILEQVGERVL 623
Query: 241 YDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERVQEVSPCLSVSDSWVWVPGRRGGF 300
YDAASRR+ARLSDFI +GEWLW RV LELI+LW+RVQEVSPCLSVSDSWVWVPGR+GGF
Sbjct: 624 YDAASRREARLSDFIGSNGEWLWSRVFLELINLWDRVQEVSPCLSVSDSWVWVPGRQGGF 683
Query: 301 SIASAWEAVRPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRWDSS----- 349
SIASAW+A+RPRGGRVLWDGLLWGG NI KH FCAWLAIKDRLGT DRLHRWDSS
Sbjct: 684 SIASAWKAIRPRGGRVLWDGLLWGGRNIPKHSFCAWLAIKDRLGTRDRLHRWDSSVPMWC 742
BLAST of IVF0005421 vs. ExPASy TrEMBL
Match:
A0A5A7UV01 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 SV=1)
HSP 1 Score: 505.8 bits (1301), Expect = 1.6e-139
Identity = 267/386 (69.17%), Postives = 276/386 (71.50%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAA+EPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLA CMGFVRGNL
Sbjct: 346 MIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNL 405
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
+RYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLV VLRS QVYWAS
Sbjct: 406 PIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWAS 465
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV---------------------- 180
VFVLPAYVH+EVDKIL SYLWRGKEEGRGGIKVAWVDV
Sbjct: 466 VFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIAST 525
Query: 181 -----------------------------------LGKSWCLRAILRKREKLKHLVRMKV 240
+G+SW LRAILRKREKLKHLV MKV
Sbjct: 526 LKILLLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVGRSWRLRAILRKREKLKHLVWMKV 585
Query: 241 GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID 300
GN NS RVWLD WL AILEQVGERVMYDAAS R+ARLSDFIDPDGEWLWP
Sbjct: 586 GNSNSCRVWLDSWLLGDAILEQVGERVMYDAASWREARLSDFIDPDGEWLWP-------- 645
Query: 301 LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF 329
RGGFSIASAWEAVRPRGG+VLWDGLLWGGGNI K+
Sbjct: 646 ------------------------RGGFSIASAWEAVRPRGGQVLWDGLLWGGGNIPKYS 699
BLAST of IVF0005421 vs. NCBI nr
Match:
KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa])
HSP 1 Score: 654 bits (1686), Expect = 2.44e-227
Identity = 325/383 (84.86%), Postives = 326/383 (85.12%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL
Sbjct: 452 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 511
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS
Sbjct: 512 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 571
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV---------------------- 180
VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV
Sbjct: 572 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIAST 631
Query: 181 -----------------------------------LGKSWCLRAILRKREKLKHLVRMKV 240
+GKSWCLRAILRKREKLKHLVRMKV
Sbjct: 632 LKILWLMLTNSGSLWVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKV 691
Query: 241 GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID 300
GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID
Sbjct: 692 GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID 751
Query: 301 LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF 326
LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF
Sbjct: 752 LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF 811
BLAST of IVF0005421 vs. NCBI nr
Match:
KAA0046851.1 (uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa])
HSP 1 Score: 543 bits (1398), Expect = 3.77e-181
Identity = 292/437 (66.82%), Postives = 305/437 (69.79%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAA+E SI FIRECLQKFGE SGLFANPRKSSIFV GVNNE ASHLA C+G
Sbjct: 657 MIFCAADELSISFIRECLQKFGEFSGLFANPRKSSIFVVGVNNEYASHLAACIGC--SWK 716
Query: 61 SVRYLGLPLLAGR-LRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWA 120
S L P + LRS D APLIQRITSRIRSWTARVLSFAGRLQLV SVLRS QVYWA
Sbjct: 717 SPCSLSWPSSSHWWLRSIDCAPLIQRITSRIRSWTARVLSFAGRLQLVRSVLRSLQVYWA 776
Query: 121 SVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV--------------------- 180
SVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV
Sbjct: 777 SVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIAN 836
Query: 181 ---------------------------------LGKSWCLRAILRKREKLKHLVRMKVGN 240
+G+SWCLRAILRKREK+KH
Sbjct: 837 TLKILLTNLGSLWVAWMEAYILKGKSLWDVDSRVGRSWCLRAILRKREKMKH-------- 896
Query: 241 GNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLW 300
VGERV+YDAASRR+A+LSDFIDP+GEWLWPRVSLELIDLW
Sbjct: 897 -------------------HVGERVLYDAASRREAKLSDFIDPNGEWLWPRVSLELIDLW 956
Query: 301 ERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHFFC 360
ERVQEVSPCLSVSDSWVWVPGR+GGFSIASAWEA+ PRGGRVLWDGLLWGGGNI KH FC
Sbjct: 957 ERVQEVSPCLSVSDSWVWVPGRQGGFSIASAWEAICPRGGRVLWDGLLWGGGNIPKHSFC 1016
Query: 361 AWLAIKDRLGTIDRLHRWDSS-------------SRDHLFFSCSFGGGGDVWSRVLRIMG 369
AWLAIKDRL T DRLHRWDSS SRDHLFFSC FGG DVWSRV +IM
Sbjct: 1017 AWLAIKDRLDTRDRLHRWDSSIPLSCILCQGGVESRDHLFFSCPFGG--DVWSRVFQIME 1062
BLAST of IVF0005421 vs. NCBI nr
Match:
TYK12108.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 522 bits (1344), Expect = 9.74e-178
Identity = 275/390 (70.51%), Postives = 289/390 (74.10%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAA+EPSIRFIRECLQKFGELSGLFANPRKS IFVAGVNNENAS LA CMGFVRGNL
Sbjct: 384 MIFCAADEPSIRFIRECLQKFGELSGLFANPRKSFIFVAGVNNENASQLAACMGFVRGNL 443
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
VRYLGLPLL GRLRSND AP+IQRITSRIRSW ARVLSFAGRLQLV SVLRS QVYWAS
Sbjct: 444 PVRYLGLPLLTGRLRSNDCAPMIQRITSRIRSWIARVLSFAGRLQLVCSVLRSLQVYWAS 503
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEEGR---------------GGIKVAWVDV------- 180
VFVLPAYVHNEVDKILRSYLWR G + VAWV+
Sbjct: 504 VFVLPAYVHNEVDKILRSYLWRDGPSWNIASTLKILWLMLTSLGSLWVAWVEAYILKGRS 563
Query: 181 -------LGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVM 240
+G+SWCLRAILR GAILEQVGERV+
Sbjct: 564 LWDVDSRVGRSWCLRAILR-----------------------------GAILEQVGERVL 623
Query: 241 YDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERVQEVSPCLSVSDSWVWVPGRRGGF 300
YDAASRR+ARLSDFI +GEWLW RV LELI+LW+RVQEVSPCLSVSDSWVWVPGR+GGF
Sbjct: 624 YDAASRREARLSDFIGSNGEWLWSRVFLELINLWDRVQEVSPCLSVSDSWVWVPGRQGGF 683
Query: 301 SIASAWEAVRPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRWDSS----- 348
SIASAW+A+RPRGGRVLWDGLLWGG NI KH FCAWLAIKDRLGT DRLHRWDSS
Sbjct: 684 SIASAWKAIRPRGGRVLWDGLLWGGRNIPKHSFCAWLAIKDRLGTRDRLHRWDSSVPMWC 742
BLAST of IVF0005421 vs. NCBI nr
Match:
KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 534 bits (1375), Expect = 3.60e-177
Identity = 272/412 (66.02%), Postives = 305/412 (74.03%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFC A+EPS+ F+RE LQKFGEL GL+AN K SIFVAG NE AS LA MGF+ GNL
Sbjct: 704 MIFCVADEPSLSFVRETLQKFGELLGLYANLGKISIFVAGSTNEVASRLAANMGFILGNL 763
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
VRYL LPLL GRLR +D APLIQRITSRIRSW ARVLSFAGR QLV SV RS QVYWAS
Sbjct: 764 PVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNARVLSFAGRFQLVRSVFRSLQVYWAS 823
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK----------------VAWVDV------ 180
VFVLP+ VHN+VDKILRSYLWR ++ I VAWV+
Sbjct: 824 VFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTLKILWLLTSLSSLWVAWVEAYILKRK 883
Query: 181 --------LGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERV 240
+ +SWCLRAILRKR+ LK+ V ++VG+G+S RVWLDPWL ILEQVGERV
Sbjct: 884 SLWAVDSGVCRSWCLRAILRKRDSLKYHVWIEVGDGSSCRVWLDPWLQGVPILEQVGERV 943
Query: 241 MYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERVQEVSPCLSVSDSWVWVPGRRGG 300
+YDAASRR+ARLS+FI PDGEW WPRVS+ELIDLW+RVQ V PCLSV D WVWVPG +GG
Sbjct: 944 LYDAASRREARLSEFIGPDGEWQWPRVSIELIDLWDRVQAVRPCLSVRDRWVWVPGHQGG 1003
Query: 301 FSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRWDSS---- 360
FSIASA + +RPRGGRV W GLLWGGGN+ KH FCAWL IK++LGT DRLHRWDSS
Sbjct: 1004 FSIASALDTIRPRGGRVRWVGLLWGGGNVPKHSFCAWLTIKNKLGTRDRLHRWDSSVPMS 1063
Query: 361 ---------SRDHLFFSCSFGGGGDVWSRVLRIMGSSHRIGHWRVELSWICH 369
SRDHLFFSC FG DVWSRVL++M SSHRI +W VELSWICH
Sbjct: 1064 FILCQGGVESRDHLFFSCPFGR--DVWSRVLQVMASSHRIRYWGVELSWICH 1113
BLAST of IVF0005421 vs. NCBI nr
Match:
KAA0059752.1 (F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa])
HSP 1 Score: 502 bits (1293), Expect = 7.22e-170
Identity = 267/386 (69.17%), Postives = 276/386 (71.50%), Query Frame = 0
Query: 1 MIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLATCMGFVRGNL 60
MIFCAA+EPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLA CMGFVRGNL
Sbjct: 346 MIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNL 405
Query: 61 SVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVHSVLRSFQVYWAS 120
+RYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLV VLRS QVYWAS
Sbjct: 406 PIRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWAS 465
Query: 121 VFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVDV---------------------- 180
VFVLPAYVH+EVDKIL SYLWRGKEEGRGGIKVAWVDV
Sbjct: 466 VFVLPAYVHHEVDKILISYLWRGKEEGRGGIKVAWVDVCLPFEESGLGIRDGPSWNIAST 525
Query: 181 -----------------------------------LGKSWCLRAILRKREKLKHLVRMKV 240
+G+SW LRAILRKREKLKHLV MKV
Sbjct: 526 LKILLLMLTNSGSLWVAWVKAYILKGRSLWDVDSRVGRSWRLRAILRKREKLKHLVWMKV 585
Query: 241 GNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELID 300
GN NS RVWLD WL AILEQVGERVMYDAAS R+ARLSDFIDPDGEWLWPR
Sbjct: 586 GNSNSCRVWLDSWLLGDAILEQVGERVMYDAASWREARLSDFIDPDGEWLWPR------- 645
Query: 301 LWERVQEVSPCLSVSDSWVWVPGRRGGFSIASAWEAVRPRGGRVLWDGLLWGGGNIQKHF 328
GGFSIASAWEAVRPRGG+VLWDGLLWGGGNI K+
Sbjct: 646 -------------------------GGFSIASAWEAVRPRGGQVLWDGLLWGGGNIPKYS 699
BLAST of IVF0005421 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 111/351 (31.62%), Postives = 158/351 (45.01%), Query Frame = 0
Query: 38 VAGVNNENASHLATCMGFVRGNLSVRYLGLPLLAGRLRSNDYAPLIQRITSRIRSWTARV 97
+AGV + + + + F G L VRYLGLPLL ++ ++DY PL+++I RI WTAR
Sbjct: 1 MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60
Query: 98 LSFAGRLQLVHSVLRSFQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIKVAWVD 157
LSFAGRLQL+ SV+ S +W S F LP+ E+D I S+LW G E KVAW D
Sbjct: 61 LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSD 120
Query: 158 V--------LG---------------------KSWCLRAILRKREKLKHLVRMKVGNGNS 217
V LG SW + IL+ R V+ + NG++
Sbjct: 121 VCTPKDEGGLGIRSLKEANKGSFWSISGNTTLGSWMWKKILKHRALASGFVKHDIHNGSN 180
Query: 218 FRVWLDPWLPEGAILEQVGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERV 277
W D W G +++ G R D A +++ + + R D R+
Sbjct: 181 TSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAV------VNHRPRRHRHDTLLRI 240
Query: 278 QEV------SPCLSVSDSWVWVPGR---RGGFSIASAWEAVRPRGGRVLWDGLLWGGGNI 337
++V S D+ W + F+ W A R +V W +W
Sbjct: 241 EDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAATREPKLKVNWYKGVWFSHAT 300
BLAST of IVF0005421 vs. TAIR 10
Match:
AT1G60720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 91.7 bits (226), Expect = 1.4e-18
Identity = 66/223 (29.60%), Postives = 97/223 (43.50%), Query Frame = 0
Query: 168 ILRKREKLKHLVRMKVGNGNSFRVWLDPWLPEGAILEQVGERVMYDAASRR---KARLSD 227
+L R + V+ +GNG W D W G +++ +G+ Y + S R AR+ +
Sbjct: 2 LLFLRPLAEQFVKCNLGNGRIAHFWHDSWTSLGPLIKVMGD---YGSRSLRIPLNARVVE 61
Query: 228 FIDPDGEWLWP----RVSLELIDLWERVQEVSPCLSVSDSWVWVPGR--RGGFSIASAWE 287
+ +G W P + + D + SP ++ DS+ WV G GFS A W+
Sbjct: 62 ALGVNG-WKLPLSRSAPAQAIHDHISTITTPSPA-TIEDSFDWVVGGVVCQGFSSARTWD 121
Query: 288 AVRPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRW-------------DS 347
A+RPR + W +W G + KH F W++ DRL T RL W ++
Sbjct: 122 AIRPRAPELDWAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIET 181
Query: 348 SSRDHLFFSCSFGGGGDVWSRVL-RIMGSSHRIGHWRVELSWI 368
SRDHL FSC F VW R+ W LSW+
Sbjct: 182 ESRDHLLFSCEF--AAQVWRLAFSRLCPRQRLFCSWAELLSWM 217
BLAST of IVF0005421 vs. TAIR 10
Match:
AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 55.1 bits (131), Expect = 1.4e-07
Identity = 29/83 (34.94%), Postives = 38/83 (45.78%), Query Frame = 0
Query: 275 SAWEAVRPRGGRVLWDGLLWGGGNIQKHFFCAWLAIKDRLGTIDRLHRW----------- 334
+ W + P G RV W +W G I KH F AW+ ++ RL T DR+ W
Sbjct: 29 ATWLHLNPIGERVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFC 88
Query: 335 --DSSSRDHLFFSCSFGGGGDVW 345
+R HLFF C F +VW
Sbjct: 89 NTHDETRQHLFFDCEF--AREVW 109
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 3.0e-10 | 33.70 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V3Z0 | 1.5e-185 | 84.86 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7TZS0 | 4.7e-152 | 66.82 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7TKU4 | 7.5e-150 | 65.78 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
A0A5D3CLU1 | 8.6e-146 | 70.51 | Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. mak... | [more] |
A0A5A7UV01 | 1.6e-139 | 69.17 | F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
KAA0062318.1 | 2.44e-227 | 84.86 | uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa] | [more] |
KAA0046851.1 | 3.77e-181 | 66.82 | uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa] | [more] |
TYK12108.1 | 9.74e-178 | 70.51 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
KAA0042317.1 | 3.60e-177 | 66.02 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
KAA0059752.1 | 7.22e-170 | 69.17 | F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa... | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 1.4e-39 | 31.62 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT1G60720.1 | 1.4e-18 | 29.60 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT2G02520.1 | 1.4e-07 | 34.94 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |