IVF0005404 (gene) Melon (IVF77) v1

Overview
NameIVF0005404
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposase
Locationchr05: 7271518 .. 7271760 (+)
RNA-Seq ExpressionIVF0005404
SyntenyIVF0005404
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACAATCAATCTTTAAATATAAAATTGGACAAATTGATTATGGAGGTCGAAGGTGTGAGAAATATATCGAAAGAGAAGGAAAGGGAAAGAGTGGAAACAAATGAAACCATACAAAGGGATGAAAATAATGAGAATGATGAAGGTGAAGGTGATAGAAATAATGGTGAAGAAAGGAGAAGGAGGGATAAAGGAGAAATGGATGGGAAATCTGGAAATGAAAGTGAAGGAAAAAAATGA

mRNA sequence

ATGGCCAACAATCAATCTTTAAATATAAAATTGGACAAATTGATTATGGAGGTCGAAGGTGTGAGAAATATATCGAAAGAGAAGGAAAGGGAAAGAGTGGAAACAAATGAAACCATACAAAGGGATGAAAATAATGAGAATGATGAAGGTGAAGGTGATAGAAATAATGGTGAAGAAAGGAGAAGGAGGGATAAAGGAGAAATGGATGGGAAATCTGGAAATGAAAGTGAAGGAAAAAAATGA

Coding sequence (CDS)

ATGGCCAACAATCAATCTTTAAATATAAAATTGGACAAATTGATTATGGAGGTCGAAGGTGTGAGAAATATATCGAAAGAGAAGGAAAGGGAAAGAGTGGAAACAAATGAAACCATACAAAGGGATGAAAATAATGAGAATGATGAAGGTGAAGGTGATAGAAATAATGGTGAAGAAAGGAGAAGGAGGGATAAAGGAGAAATGGATGGGAAATCTGGAAATGAAAGTGAAGGAAAAAAATGA

Protein sequence

MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEERRRRDKGEMDGKSGNESEGKK
Homology
BLAST of IVF0005404 vs. ExPASy TrEMBL
Match: A0A5D3DV63 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00030 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEER 60
           M NNQ+LN+KLDKLI+EVEG++++ KEKERE VE NETIQRDENNEND GEG RNNGEE 
Sbjct: 150 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 209

Query: 61  RRRDKGEMDGKSGNESEGK 80
             RDKGE DGKSGNESEGK
Sbjct: 210 GMRDKGEQDGKSGNESEGK 228

BLAST of IVF0005404 vs. ExPASy TrEMBL
Match: A0A5A7UQS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001240 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEER 60
           M NNQ+LN+KLDKLI+EVEG++++ KEKERE VE NETIQRDENNEND GEG RNNGEE 
Sbjct: 188 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 247

Query: 61  RRRDKGEMDGKSGNESEGK 80
             RDKGE DGKSGNESEGK
Sbjct: 248 GMRDKGEQDGKSGNESEGK 266

BLAST of IVF0005404 vs. ExPASy TrEMBL
Match: A0A5A7TCN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001720 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-10
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEER 60
           M NNQ+LN+KLDKL++E+EG +N+ KEKE   VE NE +QRDEN+END G+G RNNGEE 
Sbjct: 91  MTNNQALNVKLDKLLLEIEGPKNLLKEKESATVEPNENMQRDENDENDRGQGVRNNGEES 150

Query: 61  RRRDKG 67
              DKG
Sbjct: 151 GMGDKG 156

BLAST of IVF0005404 vs. ExPASy TrEMBL
Match: A0A5D3BRM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00800 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEE 60
          MANNQ+L++KLDKL++EV G+RN+ K+KE   V+ NETIQRDEN+END GE DRNNGEE
Sbjct: 2  MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEE 60

BLAST of IVF0005404 vs. ExPASy TrEMBL
Match: A0A5D3DQK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00170 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.4e-08
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDE 50
           MANNQSLNIKLDKLI+EVEG++N+ KEKER+ VE NETI+RDENN+  E
Sbjct: 152 MANNQSLNIKLDKLILEVEGLKNMLKEKERKTVENNETIERDENNDGGE 200

BLAST of IVF0005404 vs. NCBI nr
Match: TYK27677.1 (uncharacterized protein E5676_scaffold225G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 104 bits (259), Expect = 3.66e-25
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEER 60
           M NNQ+LN+KLDKLI+EVEG++++ KEKERE VE NETIQRDENNEND GEG RNNGEE 
Sbjct: 150 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 209

Query: 61  RRRDKGEMDGKSGNESEGK 79
             RDKGE DGKSGNESEGK
Sbjct: 210 GMRDKGEQDGKSGNESEGK 228

BLAST of IVF0005404 vs. NCBI nr
Match: KAA0055985.1 (uncharacterized protein E6C27_scaffold319G001240 [Cucumis melo var. makuwa])

HSP 1 Score: 104 bits (259), Expect = 7.43e-25
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEER 60
           M NNQ+LN+KLDKLI+EVEG++++ KEKERE VE NETIQRDENNEND GEG RNNGEE 
Sbjct: 188 MINNQALNMKLDKLILEVEGLKDMLKEKERETVELNETIQRDENNENDGGEGHRNNGEEM 247

Query: 61  RRRDKGEMDGKSGNESEGK 79
             RDKGE DGKSGNESEGK
Sbjct: 248 GMRDKGEQDGKSGNESEGK 266

BLAST of IVF0005404 vs. NCBI nr
Match: TYK01750.1 (hypothetical protein E5676_scaffold775G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 8.90e-14
Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEE 59
          MANNQ+L++KLDKL++EV G+RN+ K+KE   V+ NETIQRDEN+END GE DRNNGEE
Sbjct: 2  MANNQALDVKLDKLLLEVGGLRNMLKDKESAIVKPNETIQRDENDENDGGEDDRNNGEE 60

BLAST of IVF0005404 vs. NCBI nr
Match: KAA0041214.1 (hypothetical protein E6C27_scaffold128G001720 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.16e-12
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENNENDEGEGDRNNGEER 60
           M NNQ+LN+KLDKL++E+EG +N+ KEKE   VE NE +QRDEN+END G+G RNNGEE 
Sbjct: 91  MTNNQALNVKLDKLLLEIEGPKNLLKEKESATVEPNENMQRDENDENDRGQGVRNNGEES 150

Query: 61  RRRDKG 66
              DKG
Sbjct: 151 GMGDKG 156

BLAST of IVF0005404 vs. NCBI nr
Match: TYK25812.1 (uncharacterized protein E5676_scaffold436G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 1.30e-11
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = 0

Query: 1   MANNQSLNIKLDKLIMEVEGVRNISKEKERERVETNETIQRDENN 45
           MANNQSLNIKLDKLI+EVEG++N+ KEKER+ VE NETI+RDENN
Sbjct: 152 MANNQSLNIKLDKLILEVEGLKNMLKEKERKTVENNETIERDENN 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DV631.8e-1978.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UQS81.8e-1978.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TCN27.4e-1063.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BRM71.6e-0969.49Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DQK42.4e-0875.51Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK27677.13.66e-2578.48uncharacterized protein E5676_scaffold225G00030 [Cucumis melo var. makuwa][more]
KAA0055985.17.43e-2578.48uncharacterized protein E6C27_scaffold319G001240 [Cucumis melo var. makuwa][more]
TYK01750.18.90e-1469.49hypothetical protein E5676_scaffold775G00800 [Cucumis melo var. makuwa][more]
KAA0041214.13.16e-1263.64hypothetical protein E6C27_scaffold128G001720 [Cucumis melo var. makuwa][more]
TYK25812.11.30e-1180.00uncharacterized protein E5676_scaffold436G00170 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005404.1IVF0005404.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity