IVF0005402 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCGTCACGTACCTACCGCCCGTTGGCTTCATCGAAAACGGGGAAAGGGATAGTCCAGCCCACCCAGCGAACGGACACAAGAGTGAGACCAGGTTAATCAATCCCGCGGAAAAGCTCAAATGGAGGAGCCGAAGGCTGAGATCAAAGGCTCTTCTTCAGGTATTTCCTAATTTTCATTCTCTTTATCGTTCTCATCAACTCCATTTTTGGCACTATTGTTTTGATTGCTCTGATGTTATGCTGTTTCTGGAATAAAATGAGCTTCAAATCGTTGCATTAAGTAAAGATCATCCAGTGGCATATGGTTGATAACGTATTTCAACTTTTCGAGTGATTTCTTGTCGGCGATTGTCGTGTAATCGAGCTAGAAAACACTTGAGAGTCCGTATTTTCAGTAATTATTGGCGTTGATTGGTTAGCTATTTGTAAGGCAATGTTTGATTTCAAAGCATTGTCATGGTTTAGATATCTAGGATTAACCGATTTAATGGGAATTATGTTTAGTTCAAAAGGAATCTGTTGTCATTTCTGAAGTGATACTTGTCCTTTTAAGTTTTTTAGAGCAAGTTATTTTCACAGTGCATGAATTTCGAGTTTATGGTTGTTAAGGCGTTGATCCAATTCCTTTTGTAGATTTCATAGTTTGATTTTGTTCGAGGTGTTTGGCTGACTGACATGATGTCTCTCTTTTCTTTCCCTCTTGGGTGCAATGAGAAGAAAAAGAACCAAAATCGCCCAATATTTTCGAGAGAGCGAAAGAAGAGATAGAGGCTGTGACCCACTGTAATAAATCACCACGGCATCACAAAGAAACACATGGAAGAAGCGATGATATTGACGAGACTACGCCTGCTGATGAAGTAAAGGCCCCCGGAGTGTTCGGAAGAGTCAAGGAAGAGGTTGAGGCCCTTGTAGGAGCAATTCATCCCAAGAAGGATTCTGGCAGTCATTAGTTTTCTTTAAAGCAAGGAAGAGAGTTGACTCCATGCTGTAATAAGGTTTGCTTTCTTCATGATTCTTAGTTTCTTTTTATCATGCAACTCCATGCCATCTACCTTGTTCTTTGAAAACATTAGCAGGAAAATAACTTGTTTGAAGATTGACATGAAAATTGGACTATGGTTGATCTGTCTTGCATTCTGTTTAAAGTATGTAATTAACATAGAAATACCATCTTGTATCTTTGCATTCTGAACTTTGTATCTTGAGCTACAGTCTCTTTTCATTGTATCAATGAAAAGTTTGTTTCGTTTAAAAAAAATTATAGAAATACCATCAAGGTGTCTACGTATACCTGTGTGGGTACCACTGTATTATATTGACCAACAAAACCCACATTTCCTTCACCTTGTGTTGGATTGTGTTCCTTTTATACTTTAGTTTTTTTTTTTATGGTGAGCATATGCCTACAATTTATGTGTGCGTTTATGAAAAAAGGAATTTGTAATGAAAGGTGCTACTCAGCAACATAAACATCCTGTTTGAGACATCTCGAATTTTAGGCCGCTCATTTCTAGGCTTCCAAAACGGAATTAGTAGTGCCTCTTGAAAGTGTTTATCCGTAAAAGGGAGTCCTGTTATATTAATCAGTCTCAAACTCTGAAAAGGGAGG GTCGTCACGTACCTACCGCCCGTTGGCTTCATCGAAAACGGGGAAAGGGATAGTCCAGCCCACCCAGCGAACGGACACAAGAGTGAGACCAGGTTAATCAATCCCGCGGAAAAGCTCAAATGGAGGAGCCGAAGGCTGAGATCAAAGGCTCTTCTTCAGAAAAAGAACCAAAATCGCCCAATATTTTCGAGAGAGCGAAAGAAGAGATAGAGGCTGTGACCCACTGTAATAAATCACCACGGCATCACAAAGAAACACATGGAAGAAGCGATGATATTGACGAGACTACGCCTGCTGATGAAGTAAAGGCCCCCGGAGTGTTCGGAAGAGTCAAGGAAGAGGTTGAGGCCCTTGTAGGAGCAATTCATCCCAAGAAGGATTCTGGCAGTCATTAGTTTTCTTTAAAGCAAGGAAGAGAGTTGACTCCATGCTGTAATAAGGTTTGCTTTCTTCATGATTCTTAGTTTCTTTTTATCATGCAACTCCATGCCATCTACCTTGTTCTTTGAAAACATTAGCAGGAAAATAACTTGTTTGAAGATTGACATGAAAATTGGACTATGGTTGATCTGTCTTGCATTCTGTTTAAAGTATGTAATTAACATAGAAATACCATCTTGTATCTTTGCATTCTGAACTTTGTATCTTGAGCTACAGTCTCTTTTCATTGTATCAATGAAAAGTTTGTTTCGTTTAAAAAAAATTATAGAAATACCATCAAGGTGTCTACGTATACCTGTGTGGGTACCACTGTATTATATTGACCAACAAAACCCACATTTCCTTCACCTTGTGTTGGATTGTGTTCCTTTTATACTTTAGTTTTTTTTTTTATGGTGAGCATATGCCTACAATTTATGTGTGCGTTTATGAAAAAAGGAATTTGTAATGAAAGGTGCTACTCAGCAACATAAACATCCTGTTTGAGACATCTCGAATTTTAGGCCGCTCATTTCTAGGCTTCCAAAACGGAATTAGTAGTGCCTCTTGAAAGTGTTTATCCGTAAAAGGGAGTCCTGTTATATTAATCAGTCTCAAACTCTGAAAAGGGAGG ATGGAGGAGCCGAAGGCTGAGATCAAAGGCTCTTCTTCAGAAAAAGAACCAAAATCGCCCAATATTTTCGAGAGAGCGAAAGAAGAGATAGAGGCTGTGACCCACTGTAATAAATCACCACGGCATCACAAAGAAACACATGGAAGAAGCGATGATATTGACGAGACTACGCCTGCTGATGAAGTAAAGGCCCCCGGAGTGTTCGGAAGAGTCAAGGAAGAGGTTGAGGCCCTTGTAGGAGCAATTCATCCCAAGAAGGATTCTGGCAGTCATTAG MEEPKAEIKGSSSEKEPKSPNIFERAKEEIEAVTHCNKSPRHHKETHGRSDDIDETTPADEVKAPGVFGRVKEEVEALVGAIHPKKDSGSH Homology
BLAST of IVF0005402 vs. ExPASy TrEMBL
Match: A0A5D3BY12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001000 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0005402 vs. ExPASy TrEMBL
Match: A0A1S3CGT3 (uncharacterized protein LOC103500717 OS=Cucumis melo OX=3656 GN=LOC103500717 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0005402 vs. ExPASy TrEMBL
Match: A0A0A0KAY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450740 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.5e-40 Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of IVF0005402 vs. ExPASy TrEMBL
Match: A0A6J1CT17 (uncharacterized protein LOC111014044 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014044 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of IVF0005402 vs. ExPASy TrEMBL
Match: A0A6J1CRC8 (uncharacterized protein LOC111014044 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014044 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.4e-33 Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of IVF0005402 vs. NCBI nr
Match: XP_008462344.1 (PREDICTED: uncharacterized protein LOC103500717 [Cucumis melo] >KAA0059422.1 uncharacterized protein E6C27_scaffold242G001490 [Cucumis melo var. makuwa] >TYK03904.1 uncharacterized protein E5676_scaffold347G001000 [Cucumis melo var. makuwa]) HSP 1 Score: 181 bits (459), Expect = 2.24e-57 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of IVF0005402 vs. NCBI nr
Match: KGN45517.1 (hypothetical protein Csa_016837 [Cucumis sativus]) HSP 1 Score: 173 bits (438), Expect = 3.59e-54 Identity = 87/91 (95.60%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of IVF0005402 vs. NCBI nr
Match: XP_038900254.1 (uncharacterized protein LOC120087339 [Benincasa hispida] >XP_038900255.1 uncharacterized protein LOC120087339 [Benincasa hispida]) HSP 1 Score: 162 bits (410), Expect = 6.71e-50 Identity = 82/91 (90.11%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of IVF0005402 vs. NCBI nr
Match: XP_022144348.1 (uncharacterized protein LOC111014044 isoform X2 [Momordica charantia]) HSP 1 Score: 152 bits (384), Expect = 6.21e-46 Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of IVF0005402 vs. NCBI nr
Match: XP_022144340.1 (uncharacterized protein LOC111014044 isoform X1 [Momordica charantia]) HSP 1 Score: 150 bits (379), Expect = 3.70e-45 Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of IVF0005402 vs. TAIR 10
Match: AT1G72690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17490.1); Has 59 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 6.8e-20 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of IVF0005402 vs. TAIR 10
Match: AT5G57000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 7.0e-17 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 0
BLAST of IVF0005402 vs. TAIR 10
Match: AT5G57000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15 Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of IVF0005402 vs. TAIR 10
Match: AT1G17490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 4.4e-11 Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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