IVF0005387 (gene) Melon (IVF77) v1

Overview


Name	IVF0005387
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Legume-specific protein
Location	chr04: 31403138 .. 31404080 (+)
RNA-Seq Expression	IVF0005387
Synteny	IVF0005387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAATCTCTCTCTCTCTCTCTCTCTCTTCCCTTTCTTCTCCTCTCCTCTCTGTCTCGCAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCTCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCGCCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTCACAACTCGACGGGTTGCTGCCTAATCCGATCGCCGGAGGTGGGTTTTTATCACAAAAATGAAAAGGAAAAAAGTGTTTAATTTGTAATATTTGGATTATATTTTGTCTGATTTAAACAAAAAAAAAGAAAAAAGAATGGAGTCTTGAAGTGTACGGAAAGCCGAAAGGCACCGACGCTTGGGATATGATGTGTAAATTGTGAATATTGATGAATGTATGGAAGTTTGGTTAATTGGGTTGTTATTATTTTGTTTTGGATATTATGTTTGGGACTGGGAGTAGTTAGATGTCAAATCCAAATGAAGCCATCAACAATAATAAAGAAGAAAAGAATATATAGTAAGCAATGGGGGAGAGTTGTTGAAAAATCAAAGGGAATATTAAATTGTATATGTACATGGAAAAAAAGCGATGGGATGTGTAGCTTATAGAGTGGCCCAGCCTTTATGGGAGCTTTTGAGATATCTTTTTAGTGTAAAATGATCGAGCCAAGAGATATTTTTTGTTCTGTTTCCAATTGTAATTACCTCTAATTGGAGATCTTCATCCATCTCCCTGTTTGCATCAATGTACTGTGGTTGAAATTTCATTATCCTTGTGGGGTTCAACAATATTAAATAAACTTTTATAGAAG

mRNA sequence

ATTCAAATCTCTCTCTCTCTCTCTCTCTCTTCCCTTTCTTCTCCTCTCCTCTCTGTCTCGCAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCTCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCGCCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTCACAACTCGACGGGTTGCTGCCTAATCCGATCGCCGGAGGTGGGTTTTTATCACAAAAATGAAAAGGAAAAAAGTGTTTAATTTGTAATATTTGGATTATATTTTGTCTGATTTAAACAAAAAAAAAGAAAAAAGAATGGAGTCTTGAAGTGTACGGAAAGCCGAAAGGCACCGACGCTTGGGATATGATGTGTAAATTGTGAATATTGATGAATGTATGGAAGTTTGGTTAATTGGGTTGTTATTATTTTGTTTTGGATATTATGTTTGGGACTGGGAGTAGTTAGATGTCAAATCCAAATGAAGCCATCAACAATAATAAAGAAGAAAAGAATATATAGTAAGCAATGGGGGAGAGTTGTTGAAAAATCAAAGGGAATATTAAATTGTATATGTACATGGAAAAAAAGCGATGGGATGTGTAGCTTATAGAGTGGCCCAGCCTTTATGGGAGCTTTTGAGATATCTTTTTAGTGTAAAATGATCGAGCCAAGAGATATTTTTTGTTCTGTTTCCAATTGTAATTACCTCTAATTGGAGATCTTCATCCATCTCCCTGTTTGCATCAATGTACTGTGGTTGAAATTTCATTATCCTTGTGGGGTTCAACAATATTAAATAAACTTTTATAGAAG

Coding sequence (CDS)

ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCGGCCATCCGATCTTGGCTTTGCGATTCTCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAATTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCGCCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCGCTCCGCCATCTCACAACTCGACGGGTTGCTGCCTAA

Protein sequence

MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA

Homology

[Close]

BLAST of IVF0005387 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 90
          TSSTTATQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of IVF0005387 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.2e-38
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 90
          TSSTT TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTT-TQILVSTGVQSPLRHLTTRRVAA 88

[Close]

BLAST of IVF0005387 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
          MEGLIPFVYKAI+QYK +K    I SWLC+SPS SY+RLP+GDSGRFQ Q      S AS
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 90
          PSS +P SS +ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSS-SATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]

BLAST of IVF0005387 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-20
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
          MEGLIPFVYKAI+QYK +K    I SWLC+SPS SY+RLP+GDSGRFQ Q      S AS
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 90
          PSS +P SS +ATQI+VS+GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSS-SATQIIVSSGVQSPHQCLTHRPIAA 94

[Close]

BLAST of IVF0005387 vs. ExPASy TrEMBL
Match: C6SZB5 (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 61/95 (64.21%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQ------SDAS 60
          ME LIPFVYKAI+QYK  K    I SWLC+SPS SY+RLP+GDSGRFQ +      S AS
Sbjct: 1  MESLIPFVYKAIMQYKGGKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIRAPASSFSAAS 60

Query: 61 PSSKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 90
          PSS +P SS +ATQI+VS+GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSS-SATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]

BLAST of IVF0005387 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (436), Expect = 6.27e-54
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89
          TSSTTATQILVSTGVQSPLRHLTTRRVAA
Sbjct: 61 TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of IVF0005387 vs. NCBI nr
Match: KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus])

HSP 1 Score: 162 bits (410), Expect = 1.51e-48
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 3   GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 62
           GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS
Sbjct: 109 GLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSPTS 168

Query: 63  STTATQILVSTGVQSPLRHLTTRRVAA 89
           STT TQILVSTGVQSPLRHLTTRRVAA
Sbjct: 169 STT-TQILVSTGVQSPLRHLTTRRVAA 194

[Close]

BLAST of IVF0005387 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142 bits (358), Expect = 4.98e-42
Identity = 78/91 (85.71%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ--FQSDASPSSK 60
          MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ    S ASPSSK
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60

Query: 61 SPTSSTTATQILVSTGVQSPLRHLTTRRVAA 89
          S  +S+T TQIL+STGVQSPLRHLT RRVAA
Sbjct: 61 S--ASSTTTQILISTGVQSPLRHLTPRRVAA 89

[Close]

BLAST of IVF0005387 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140 bits (354), Expect = 2.03e-41
Identity = 77/91 (84.62%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ--FQSDASPSSK 60
          MEG+IPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ    S ASPSSK
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQDGSYSAASPSSK 60

Query: 61 SPTSSTTATQILVSTGVQSPLRHLTTRRVAA 89
          S  +S+T TQIL+STGVQSPLRHLT RRV A
Sbjct: 61 S--ASSTTTQILISTGVQSPLRHLTPRRVVA 89

[Close]

BLAST of IVF0005387 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 127 bits (319), Expect = 4.67e-36
Identity = 69/91 (75.82%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60
          MEGLIPFVY+AIV YKN+KQVP IRSWL DSPS SYIRLPSGDSGRF FQSD S ++ SP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60

Query: 61 TSS--TTATQILVSTGVQSPLRHLTTRRVAA 89
          + S  +TATQILV+TGVQSPLR L   RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

[Close]

BLAST of IVF0005387 vs. TAIR 10
Match: AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 4.9e-07
Identity = 39/86 (45.35%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQ--YKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRF-----QFQSDA 60
          MEGLIP VYKA++Q  Y NE Q            S+ Y+RLP GDSGRF           
Sbjct: 1  MEGLIPLVYKAVMQIRYGNESQ---------QLSSSYYVRLP-GDSGRFVRSDLDVSGPG 60

Query: 61 SPSSKSPTSSTTATQILVSTGVQSPL 80
          S SS   +SST+ T   V  GVQSP+
Sbjct: 61 SNSSNRASSSTSTTTFAVYAGVQSPV 76

[Close]

BLAST of IVF0005387 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.1e-05
Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTS--YIRLPSGDSGRFQ 49
          MEGLIPF+YKAIV YK E    ++      SPS +  Y+RLP   S RF+
Sbjct: 1  MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFR 50

The following BLAST results are available for this feature:

BLAST of IVF0005387 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0005387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNC7	4.5e-40	100.00	Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LD26	3.2e-38	98.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1	[more]
K7MT87	3.6e-21	66.32	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1	[more]
A0A0B2P904	2.3e-20	65.26	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1	[more]
C6SZB5	1.5e-19	64.21	Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of IVF0005387 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044116.1	6.27e-54	100.00	legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p...	[more]
KAE8650999.1	1.51e-48	98.85	hypothetical protein Csa_002313 [Cucumis sativus]	[more]
KAG7017269.1	4.98e-42	85.71	hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580521.1	2.03e-41	84.62	hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6596392.1	4.67e-36	75.82	hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of IVF0005387 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37750.1	4.9e-07	45.35	unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bact...	[more]
AT5G02090.1	2.1e-05	50.00	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..66
None	No IPR available	PANTHER	PTHR34670:SF10	LEGUME-SPECIFIC PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR34670	EXPRESSED PROTEIN	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005387.1	IVF0005387.1	mRNA