IVF0005372 (gene) Melon (IVF77) v1

Overview
NameIVF0005372
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr01: 32332410 .. 32332610 (-)
RNA-Seq ExpressionIVF0005372
SyntenyIVF0005372
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCTACGATGGTTTGCCCATCCGACGCCCCACGCCGAAGAAACTTCTAAATTGTCAGTGATACCGTCCACTGATGGACCGCCAGGATGGGACCGCCAATGCTCCTTGTTCTACACGATTGCCAACGCTAATCGGCACCTTCGCCGATTAATCGCCGCTTTATTAATAGTTGATTGCCCGAGGAGGAAACACGTTTAA

mRNA sequence

ATGGTCCTACGATGGTTTGCCCATCCGACGCCCCACGCCGAAGAAACTTCTAAATTGTCAGTGATACCGTCCACTGATGGACCGCCAGGATGGGACCGCCAATGCTCCTTGTTCTACACGATTGCCAACGCTAATCGGCACCTTCGCCGATTAATCGCCGCTTTATTAATAGTTGATTGCCCGAGGAGGAAACACGTTTAA

Coding sequence (CDS)

ATGGTCCTACGATGGTTTGCCCATCCGACGCCCCACGCCGAAGAAACTTCTAAATTGTCAGTGATACCGTCCACTGATGGACCGCCAGGATGGGACCGCCAATGCTCCTTGTTCTACACGATTGCCAACGCTAATCGGCACCTTCGCCGATTAATCGCCGCTTTATTAATAGTTGATTGCCCGAGGAGGAAACACGTTTAA

Protein sequence

MVLRWFAHPTPHAEETSKLSVIPSTDGPPGWDRQCSLFYTIANANRHLRRLIAALLIVDCPRRKHV
Homology
[Close]
BLAST of IVF0005372 vs. ExPASy TrEMBL
Match: A0A0A0KCG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448870 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.3e-07
Identity = 33/50 (66.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1   MVLRWFAHPTPHAEETSKLSVIPSTDGPPGWDRQ-------CSLFYTIAN 44
           MVLR+  HPTPHAEETSKLSVIPST GPP WDR         +L  TIAN
Sbjct: 64  MVLRFPPHPTPHAEETSKLSVIPSTGGPPEWDRHGPSSTRLPTLICTIAN 113

The following BLAST results are available for this feature:
BLAST of IVF0005372 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0005372 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCG76.3e-0766.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448870 PE=4 SV=1[more]
BLAST of IVF0005372 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of IVF0005372 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005372.1IVF0005372.1mRNA