IVF0005298 (gene) Melon (IVF77) v1

Overview


Name	IVF0005298
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA ligase 1-like
Location	tig00000060: 280835 .. 282920 (+)
RNA-Seq Expression	IVF0005298
Synteny	IVF0005298

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCGGAGAGTCCAAGCTTGCTATCTCCACTGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGAAGCAGAGCAGCTGATGGATCCAAGACCGGTGCTGCCGATTCCTCTGTCGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTCTCAAGGTGGTTGAATCTTCCGAGAATAAGGTAGAGCAGCTAGATGAGAAGAAGATCGATGATGTTGCGAAGACTGAACCGGAGGTTAAGATAGAGCAGAAGATCGATGCGGCTGTGAAGACTGAAGGAGTGAAAACAGAGGAGAAAAGAGAGAAGGAGGTTGCCGGCGACAATGAGAAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGTGGTGAGAAGAAGGAGAAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTCGTAGAACAAGGAGTAAAAGCCGTTGAGGAAAAACCGTTGGGCGGAGAAGTTGAAAAGGCAGGAATTAAAGCTGCAGATAAAAAGGAGGTGGCCGGAGAAACGATTAAAACGGAGAAGAAGGAAGGCGGGGCTGTTGAAGAAGGAATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGTCAGTAAAATTTTGACACTCTCCAACTAATTTATTTCATACAAATTTACAAAAATGTCAAAATGAATGGAAATAATTACTATTTTAATTCATTTTTTCATATTTAAAAATATTTTCTTTTAAGCTCTTTAAGGACTAAAAATAAAAATATGGTAAAAGAAATATAATATTTACCAAAAAAAACATAAATTTGTTTCTATTAGTTTCTCAAATTTTTATTTTTTGAAAAAATCCTTTCTAAGAATGTAATGGTAGTAGGCGAGGACAAACAAACTACACTTTTATGTACAACAAGATTTCCGCTCTTAAAAAAAGTCAAACAAGTCAAAGATCTTTGGTGAGCTCGTAAAAGTTTGAAAAAAAAGAGTCTATTAATAAAATATTTATAAATATAATAAAATTTTACTTTCGATAATGTTTTGTCATTTAAAACCATTTCTGTCACACACTTATTCACTAAATCACATTGTTTATAATTTACTATTAAACCAAAACGATAACATTATAACAATGAATACATATTTGATTTTGCAAGCATAACTCAACTTTAAACATCGTTATCTTCAAAATTAGAACTTTAATTCTCCGAAGAAAAAAATATTTATCTTCCCTGTAAATAGTTGGAATGAAGTAAAATAAATGACATATGATTTAAAAGTTGTAAAAGTCTAAAAAATGTAGTTTGTGTGGACAGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGCTAAGAAGGAAGAAACCCAAAGCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGTTTGATTTCTTATTATTCTTCACATTAACATTATCATTAGGGGAAAACATTTTTTTTTTTTAACTACAAATTTAATTCCTGAACTCTGAAATTTGTGTGCAGAGATTGTTACTAATGGATTAATTAATGCAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAGCACCAACTAAGTGATAAAATGATTTTGTGGCCAAATTGAAAGATGATTGGAGATATAGTTATATATATTTACCCACACACACACACACATATAATTACAAAAGAAATGTTAAATGATTTTTATTGTCTAAATAAGAACTCCTGTGGCTCAATAACAAGTGTAAATGATCTGTACTTACCTATTTTGTATTTTTCTTTCTCTTGAACTCCACTTTATTACGTAAAGTTATGTG

mRNA sequence

ATGGGTTGCGGAGAGTCCAAGCTTGCTATCTCCACTGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGAAGCAGAGCAGCTGATGGATCCAAGACCGGTGCTGCCGATTCCTCTGTCGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTCTCAAGGTGGTTGAATCTTCCGAGAATAAGGTAGAGCAGCTAGATGAGAAGAAGATCGATGATGTTGCGAAGACTGAACCGGAGGTTAAGATAGAGCAGAAGATCGATGCGGCTGTGAAGACTGAAGGAGTGAAAACAGAGGAGAAAAGAGAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGTGGTGAGAAGAAGGAGAAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTCGTAGAACAAGGAGTAAAAGCCGTTGAGGAAAAACCGTTGGGCGGAGAAGTTGAAAAGGCAGGAATTAAAGCTGCAGATAAAAAGGAGGTGGCCGGAGAAACGATTAAAACGGAGAAGAAGGAAGGCGGGGCTGTTGAAGAAGGAATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGCTAAGAAGGAAGAAACCCAAAGCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAGCACCAACTAAGTGATAAAATGATTTTGTGGCCAAATTGAAAGATGATTGGAGATATAGTTATATATATTTACCCACACACACACACACATATAATTACAAAAGAAATGTTAAATGATTTTTATTGTCTAAATAAGAACTCCTGTGGCTCAATAACAAGTGTAAATGATCTGTACTTACCTATTTTGTATTTTTCTTTCTCTTGAACTCCACTTTATTACGTAAAGTTATGTG

Coding sequence (CDS)

ATGGGTTGCGGAGAGTCCAAGCTTGCTATCTCCACTGCCGACGGCATTCTCCACCGCAAGAAATCATCCGCTAGTCGATCTAAGAGCGGAAGCAGAGCAGCTGATGGATCCAAGACCGGTGCTGCCGATTCCTCTGTCGCTGATTTGAAGGTTCCGTCTCTGAACAAAATCGATAGCTCTCTCAAGGTGGTTGAATCTTCCGAGAATAAGGTAGAGCAGCTAGATGAGAAGAAGATCGATGATGTTGCGAAGACTGAACCGGAGGTTAAGATAGAGCAGAAGATCGATGCGGCTGTGAAGACTGAAGGAGTGAAAACAGAGGAGAAAAGAGAGAAGGAGGTTGCCGGCGACAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGCAGTGAGAAGAAGGAGAAGGAGGTTTCCGGCGGTGGTGAGAAGAAGGAGAAGGAGGACGGAGGGAATGGCGGTTCTGTTGAAAAACAGGTGGCCGGAGAAACGAAAGCAGAGGAGAAGAAGGAGGACGGTGTTAAGGGGAGTGAAGTTAAGGTCGTAGAACAAGGAGTAAAAGCCGTTGAGGAAAAACCGTTGGGCGGAGAAGTTGAAAAGGCAGGAATTAAAGCTGCAGATAAAAAGGAGGTGGCCGGAGAAACGATTAAAACGGAGAAGAAGGAAGGCGGGGCTGTTGAAGAAGGAATCAAAGCTGCGGAGGAAAAAAAATTGGCTGAAGAACCCAAAGTAGAGAAGCAAAATGGAGAGGCAGTGAAATTGAAGGAAGAAAGTGAAGCTAAGAAGGAAGAAACCCAAAGCTCAGCACCCACTCCACTACAAGACAAGAATCTCAAAGATCCCAAGGAAAATGGAGGTGATTTGGGAGTGAAGAACTCAACAGCAGAGGAAAAGAAAATAGCACCAACTAAGTGA

Protein sequence

MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSSLKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDSEKKEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQVAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVKNSTAEEKKIAPTK

Homology

[Close]

BLAST of IVF0005298 vs. ExPASy TrEMBL
Match: A0A5A7U7H3 (DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00520 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.6e-143
Identity = 310/324 (95.68%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDSEK 120
           LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGD+EK
Sbjct: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 -----------KEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180
                      KEKEV+G SEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV
Sbjct: 121 KEVAGDSEKKEKEKEVAGDSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180

Query: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240
           AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK
Sbjct: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240

Query: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300
           KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD
Sbjct: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300

Query: 301 PKENGGDLGVKNSTAEEKKIAPTK 314
           PKENGGDLGVKNSTAEEKKIAPTK
Sbjct: 301 PKENGGDLGVKNSTAEEKKIAPTK 324

[Close]

BLAST of IVF0005298 vs. ExPASy TrEMBL
Match: A0A1S3AXZ0 (DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 2.7e-140
Identity = 306/315 (97.14%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDSEK 120
           LKVVESSENKVEQ DEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGD+EK
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 KEKEVSGGSEK--KEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQVAGETKAEEK 180
             KEV+G SEK  KEKEVSGGSEKKEKEVS GGEKKEKEDGGNGGSVEKQVAGETKAEEK
Sbjct: 121 --KEVAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEK 180

Query: 181 KEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEG 240
           KEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEG
Sbjct: 181 KEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEG 240

Query: 241 IKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLG 300
           IKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLG
Sbjct: 241 IKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLG 300

Query: 301 VKNSTAEEKKIAPTK 314
           VKNSTAEEKKIAPTK
Sbjct: 301 VKNSTAEEKKIAPTK 313

[Close]

BLAST of IVF0005298 vs. ExPASy TrEMBL
Match: A0A0A0L8Y3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 7.1e-109
Identity = 264/324 (81.48%), Postives = 270/324 (83.33%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI TADGILHRKKSSASRSKSG RA DGSKT  A SS ADLKVPSLNKIDSS
Sbjct: 101 MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 160

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVK------------TEGVKTEE 120
           +K VESSENKVEQ DEKKIDDVAK EPEVK EQKIDAAVK            TEGVKTEE
Sbjct: 161 VK-VESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEE 220

Query: 121 KREKEVAGDSEKKEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQ 180
           ++EKEVAGDSEKKEKEV+  SEKKEKEV+  S           EKKE EDGGNGGSVEKQ
Sbjct: 221 RKEKEVAGDSEKKEKEVASSSEKKEKEVASSS-----------EKKENEDGGNGGSVEKQ 280

Query: 181 VAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTE 240
           VAGETKAEEKKE    GSEVK VEQGVK VEEK L GEVEK GIKA +KKEVAGET KTE
Sbjct: 281 VAGETKAEEKKE----GSEVK-VEQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTE 340

Query: 241 KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLK 300
           KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLK
Sbjct: 341 KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLK 400

Query: 301 DPKENGGDLGVKNSTAEEKKIAPT 313
           DPKENGGDL VKNST EEKKIAPT
Sbjct: 401 DPKENGGDLEVKNSTTEEKKIAPT 406

[Close]

BLAST of IVF0005298 vs. ExPASy TrEMBL
Match: A0A6J1IS09 (enolase-phosphatase E1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479436 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-30
Identity = 151/351 (43.02%), Postives = 187/351 (53.28%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLA+ST DG+L RKKSSA RSK+GS+AA                          
Sbjct: 1   MGCGESKLAVSTTDGVLLRKKSSA-RSKNGSKAA-------------------------- 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKE------- 120
                     V  +D+ K+  V KTE  +  E+KID +VK E  K  EKRE++       
Sbjct: 61  ----------VAVVDDVKVASVKKTEKMIN-EEKIDGSVKIESEKNTEKREEKKSDAEKI 120

Query: 121 ---VAGDSEKKEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQVA 180
              V  +SE+K   V    +    EV+   E KEKEV+  GEKKEKEDG NGG++EKQVA
Sbjct: 121 VGTVKFESEEKSDGVVAEVQNPATEVAKTEEIKEKEVTCDGEKKEKEDGNNGGAIEKQVA 180

Query: 181 GETKAEEKKEDG--VKGSEVKV-------------------------------VEQGVKA 240
           GETKAE++KE    V GS ++V                               VEQ +K 
Sbjct: 181 GETKAEKEKEKEAIVSGSPIEVAQGTKPVEEQQLAGEVEQGNKPVEKKQVVGEVEQVIKP 240

Query: 241 VEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGG------AVEEGIKAAEEKKLAEEP 300
           VEEKPL G+VE+  IK  D+K++  ET KTEK E G       +E+ IK  EEK+LAEEP
Sbjct: 241 VEEKPLIGQVEQI-IKTVDEKQLPIET-KTEKNESGDNGGSAIIEQVIKPVEEKQLAEEP 300

Query: 301 KVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLGVKNS 303
           KVEKQ GEAVKLKEE++AKKEE         Q     D K N  +L VK+S
Sbjct: 301 KVEKQTGEAVKLKEETQAKKEEPAPKV-EQTQISATPDAKGNASELAVKDS 310

[Close]

BLAST of IVF0005298 vs. ExPASy TrEMBL
Match: A0A6J1IUL2 (enolase-phosphatase E1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479436 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.6e-30
Identity = 143/322 (44.41%), Postives = 177/322 (54.97%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLA+ST DG+L RKKSSA RSK+GS+AA                          
Sbjct: 1   MGCGESKLAVSTTDGVLLRKKSSA-RSKNGSKAA-------------------------- 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKE------- 120
                     V  +D+ K+  V KTE  +  E+KID +VK E  K  EKRE++       
Sbjct: 61  ----------VAVVDDVKVASVKKTEKMIN-EEKIDGSVKIESEKNTEKREEKKSDAEKI 120

Query: 121 ---VAGDSEKKEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQVA 180
              V  +SE+K   V    +    EV+   E KEKEV+  GEKKEKEDG NGG++EKQVA
Sbjct: 121 VGTVKFESEEKSDGVVAEVQNPATEVAKTEEIKEKEVTCDGEKKEKEDGNNGGAIEKQVA 180

Query: 181 GETKAEEKKEDG--VKGSEVKV-------------------------------VEQGVKA 240
           GETKAE++KE    V GS ++V                               VEQ +K 
Sbjct: 181 GETKAEKEKEKEAIVSGSPIEVAQGTKPVEEQQLAGEVEQGNKPVEKKQVVGEVEQVIKP 240

Query: 241 VEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGG------AVEEGIKAAEEKKLAEEP 274
           VEEKPL G+VE+  IK  D+K++  ET KTEK E G       +E+ IK  EEK+LAEEP
Sbjct: 241 VEEKPLIGQVEQI-IKTVDEKQLPIET-KTEKNESGDNGGSAIIEQVIKPVEEKQLAEEP 282

[Close]

BLAST of IVF0005298 vs. NCBI nr
Match: KAA0049449.1 (DNA ligase 1-like [Cucumis melo var. makuwa] >TYK16128.1 DNA ligase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 520 bits (1339), Expect = 4.39e-184
Identity = 310/324 (95.68%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDSEK 120
           LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGD+EK
Sbjct: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 KE-----------KEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180
           KE           KEV+G SEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV
Sbjct: 121 KEVAGDSEKKEKEKEVAGDSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQV 180

Query: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240
           AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK
Sbjct: 181 AGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEK 240

Query: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300
           KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD
Sbjct: 241 KEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKD 300

Query: 301 PKENGGDLGVKNSTAEEKKIAPTK 313
           PKENGGDLGVKNSTAEEKKIAPTK
Sbjct: 301 PKENGGDLGVKNSTAEEKKIAPTK 324

[Close]

BLAST of IVF0005298 vs. NCBI nr
Match: XP_008438814.1 (PREDICTED: DNA ligase 1-like [Cucumis melo])

HSP 1 Score: 511 bits (1317), Expect = 6.59e-181
Identity = 306/315 (97.14%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDSEK 120
           LKVVESSENKVEQ DEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGD+EK
Sbjct: 61  LKVVESSENKVEQRDEKKIDDVAKTEPEVKIEQKIDAAVKTEGVKTEEKREKEVAGDNEK 120

Query: 121 KEKEVSGGSEKKEKE--VSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQVAGETKAEEK 180
           KE  V+G SEKKEKE  VSGGSEKKEKEVS GGEKKEKEDGGNGGSVEKQVAGETKAEEK
Sbjct: 121 KE--VAGDSEKKEKEKEVSGGSEKKEKEVSAGGEKKEKEDGGNGGSVEKQVAGETKAEEK 180

Query: 181 KEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEG 240
           KEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEG
Sbjct: 181 KEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTEKKEGGAVEEG 240

Query: 241 IKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLG 300
           IKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLG
Sbjct: 241 IKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLKDPKENGGDLG 300

Query: 301 VKNSTAEEKKIAPTK 313
           VKNSTAEEKKIAPTK
Sbjct: 301 VKNSTAEEKKIAPTK 313

[Close]

BLAST of IVF0005298 vs. NCBI nr
Match: KAE8650378.1 (hypothetical protein Csa_009605 [Cucumis sativus])

HSP 1 Score: 424 bits (1091), Expect = 1.97e-146
Identity = 271/324 (83.64%), Postives = 278/324 (85.80%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI TADGILHRKKSSASRSKSG RA DGSKT  A SS ADLKVPSLNKIDSS
Sbjct: 1   MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 60

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVK------------TEGVKTEE 120
           +KV ESSENKVEQ DEKKIDDVAK EPEVK EQKIDAAVK            TEGVKTEE
Sbjct: 61  VKV-ESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEE 120

Query: 121 KREKEVAGDSEKKEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQ 180
           ++EKEVAGDSEKKEKEV+  SEKKEKEV+  SEKKEKEV+   EKKE EDGGNGGSVEKQ
Sbjct: 121 RKEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQ 180

Query: 181 VAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTE 240
           VAGETKAEEKKE    GSEVKV EQGVK VEEK L GEVEK GIKA +KKEVAGET KTE
Sbjct: 181 VAGETKAEEKKE----GSEVKV-EQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTE 240

Query: 241 KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLK 300
           KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLK
Sbjct: 241 KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLK 300

Query: 301 DPKENGGDLGVKNSTAEEKKIAPT 312
           DPKENGGDL VKNST EEKKIAPT
Sbjct: 301 DPKENGGDLEVKNSTTEEKKIAPT 317

[Close]

BLAST of IVF0005298 vs. NCBI nr
Match: XP_004134472.3 (histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus])

HSP 1 Score: 424 bits (1091), Expect = 3.42e-145
Identity = 271/324 (83.64%), Postives = 278/324 (85.80%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKIDSS 60
           MGCGESKLAI TADGILHRKKSSASRSKSG RA DGSKT  A SS ADLKVPSLNKIDSS
Sbjct: 83  MGCGESKLAIDTADGILHRKKSSASRSKSGRRAGDGSKTSTAHSSSADLKVPSLNKIDSS 142

Query: 61  LKVVESSENKVEQLDEKKIDDVAKTEPEVKIEQKIDAAVK------------TEGVKTEE 120
           +KV ESSENKVEQ DEKKIDDVAK EPEVK EQKIDAAVK            TEGVKTEE
Sbjct: 143 VKV-ESSENKVEQRDEKKIDDVAKIEPEVKTEQKIDAAVKIESEEKSDSIVVTEGVKTEE 202

Query: 121 KREKEVAGDSEKKEKEVSGGSEKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGSVEKQ 180
           ++EKEVAGDSEKKEKEV+  SEKKEKEV+  SEKKEKEV+   EKKE EDGGNGGSVEKQ
Sbjct: 203 RKEKEVAGDSEKKEKEVASSSEKKEKEVASSSEKKEKEVASSSEKKENEDGGNGGSVEKQ 262

Query: 181 VAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGETIKTE 240
           VAGETKAEEKKE    GSEVKV EQGVK VEEK L GEVEK GIKA +KKEVAGET KTE
Sbjct: 263 VAGETKAEEKKE----GSEVKV-EQGVKGVEEKLLAGEVEKEGIKAVEKKEVAGET-KTE 322

Query: 241 KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEETQSSAPTPLQDKNLK 300
           KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESE KKEETQ SAPTPLQDKNLK
Sbjct: 323 KKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEGKKEETQISAPTPLQDKNLK 382

Query: 301 DPKENGGDLGVKNSTAEEKKIAPT 312
           DPKENGGDL VKNST EEKKIAPT
Sbjct: 383 DPKENGGDLEVKNSTTEEKKIAPT 399

[Close]

BLAST of IVF0005298 vs. NCBI nr
Match: XP_038902432.1 (histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispida])

HSP 1 Score: 288 bits (737), Expect = 1.52e-92
Identity = 215/335 (64.18%), Postives = 255/335 (76.12%), Query Frame = 0


Query: 1   MGCGESKLAISTADGILHRKKSSASRSKSGSRAADGSKTGAADSSVADLKVPSLNKID-- 60
           MGCGESKLA++TADGILHRKKS A RSKSG ++ADGSK+ +AD++VADLKVPS NKID  
Sbjct: 1   MGCGESKLAVATADGILHRKKSIAGRSKSGRKSADGSKS-SADAAVADLKVPSQNKIDEE 60

Query: 61  ---SSLKVVESSENKVEQLDEKKIDD-VAKTEPEVKI--------EQKIDAAVKTEGVKT 120
              S++K+   SENK+EQ +EKKIDD  AK + E KI        E+KID AVK+E   +
Sbjct: 61  KVDSAVKI--ESENKIEQREEKKIDDDAAKIKSEKKIHDAVKIESEKKIDGAVKSE---S 120

Query: 121 EEKREKEVAGDSEKKEKEVSGGS--EKKEKEVSGGSEKKEKEVSGGGEKKEKEDGGNGGS 180
           EEK +  VA   E +     GG   E+KEKEV+G SEKKEKE +G  EKKEKE G NGGS
Sbjct: 121 EEKIDSVVA---EVQNVATEGGKTEERKEKEVTGDSEKKEKEATGDSEKKEKEGGDNGGS 180

Query: 181 VEKQVAGETKAEEKKEDGVKGSEVKVVEQGVKAVEEKPLGGEVEKAGIKAADKKEVAGET 240
           VEKQVAGETKAE++KE   +  E+ VVEQ +K VEEKPL GEVE+ GIK  ++K++ GET
Sbjct: 181 VEKQVAGETKAEKEKEK--EAGEI-VVEQKIKPVEEKPLTGEVEQ-GIKLVEEKQLVGET 240

Query: 241 IKTEKKEGGAVEEGIKAAEEKKLAEEPKVEKQNGEAVKLKEESEAKKEE--------TQS 300
            KTEKK+GGAVE+  K AEEK+LAEEPKVEKQNGEAVKLKEE++AKKEE        TQS
Sbjct: 241 -KTEKKDGGAVEQANKPAEEKQLAEEPKVEKQNGEAVKLKEETQAKKEEAAAPKVEETQS 300

Query: 301 SAPTPLQDKNLKDPKENGGDLGVKNSTAEEKKIAP 311
           SA TPL+DKN+KDPKEN  DLGVK+STAEEKKIAP
Sbjct: 301 SA-TPLEDKNVKDPKENAVDLGVKDSTAEEKKIAP 320

The following BLAST results are available for this feature:

BLAST of IVF0005298 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0005298 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7H3	7.6e-143	95.68	DNA ligase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A1S3AXZ0	2.7e-140	97.14	DNA ligase 1-like OS=Cucumis melo OX=3656 GN=LOC103483804 PE=4 SV=1	[more]
A0A0A0L8Y3	7.1e-109	81.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152040 PE=4 SV=1	[more]
A0A6J1IS09	2.3e-30	43.02	enolase-phosphatase E1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114794...	[more]
A0A6J1IUL2	8.6e-30	44.41	enolase-phosphatase E1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114794...	[more]

BLAST of IVF0005298 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049449.1	4.39e-184	95.68	DNA ligase 1-like [Cucumis melo var. makuwa] >TYK16128.1 DNA ligase 1-like [Cucu...	[more]
XP_008438814.1	6.59e-181	97.14	PREDICTED: DNA ligase 1-like [Cucumis melo]	[more]
KAE8650378.1	1.97e-146	83.64	hypothetical protein Csa_009605 [Cucumis sativus]	[more]
XP_004134472.3	3.42e-145	83.64	histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus]	[more]
XP_038902432.1	1.52e-92	64.18	histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Benincasa hispid...	[more]

BLAST of IVF0005298 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..77
None	No IPR available	COILS	Coil	Coil	coord: 253..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005298.1	IVF0005298.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity