IVF0005293 (gene) Melon (IVF77) v1

Overview


Name	IVF0005293
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	cytochrome c oxidase assembly protein COX19-like
Location	chr01: 31759130 .. 31761793 (-)
RNA-Seq Expression	IVF0005293
Synteny	IVF0005293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGCACCATTTCAAGCCGCTACCCGCTTCAGAGCTTCCTCCGTGATTTTCCCGGTCGGCTTCAGGGCTTCAGGGTAGTTTATCACGATCCAATAGCGTATCACCGGCGCTGGTCATTCAAGCTAGTTTTCGACTTGGCGTTCCGTAGTATGGACGAATGAAATTTTCTGTTTCGAGCTATCAGGAGTTTCTATAATGAGTGCAGGTACTTTATGAGTCCCTGAGGGCAAGAGTGATAGCATGATTTTTCTTTTCCATTTTTTGTGGCTGAATTTATGTTAGTTTCGAGGAAGGTAGGGATTTGAATGGTTGAGTGAGTTAAGGTTTTTGATTGTTGTCGGTAAATTTATAAGGTCCGGATCAGGGATCCACTCTTTTATGAGCTCGTGTTTAGTGTTTTTCGGATATCAAACTCATTTGGAAAATAAATAGATCTAGATATAGCTGCATATGATGGGGTTAAAGGGGCCTAGGAGAGAGGAATTTTTACTGCTAGCTTCTGATATTGTTACTTCTTCAAATTTTTATATATATCATATAAAGAGTATAAAGTTGAGATATATCATATAAAGAGTATAAAGTTGAGGGGTCGAACCTGGGTCTATACTAAATCTGTCGGTGCTCGACACAACCGCAGAGTATACACAACCGGTAGAAGTGGAATTGAATTGTAAGACAATCAATGACAATGTGATTTGGATTGTAAATTTGGTGGCTTGTGTTTTCCCATAAATGAATCACGATGAACCATTCTCATACCAAGCGTGGTATTAGATGAAAATGTAGAGCTAAAATGCTTCGGTGGTGCCAAGCAAGATAACCATTCCGTTTCTAATTTTAAATAATTTTTTTGATTTACAAATTACAATTTTATAGACGTGCATAGGATGGATATATATTCTTTTTCGGCTAATTTGATTTGTTGAGAACTACTGTGATCTTTATGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACTTGGTAGTTCTTTTTTGTTGTTTTTTTAAGCAATATAGTCATTACTAGGATATACGATATTTGGGATATTTTTTCAAGGTTACTGTGTCCATTGCTTGTTTATGATGCATGAACATTATTGCAGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAAATACCTTGAATGCCGTATGGAAAAGTAAGGTTCTTGACTTTTTTATGTGTTCCTTGCCCTTCTCTAGATTCATGGACTTTTATTTCTGAGAACCCGGATTATAGATTATAGATTATAATTGTATTGGTCATCCTTCATCATTAAGTTTTACACACGACTCCTCCATAATGAGTCAATGAAAAACCCTTCCACCAAAATTCTAGGAGAACAGATAGTGCCAATATTGTGGTGTAAGCTCAAGTTGCATTTTGCTTTATGTGGCTCTAACAAAAGAAAGTAGGTGCACGGTTTAGTATTTATAAGCTTTTATCATGCCAAAATCTAAAAGTCTCTAAATTAAGAAATAAGGTGGACCTACGCAAACAAACACACACACACACAAAGTATAAGTAGCTACAATTTCCAGAGCCGTGCACTTTCACCAGTCAGCTAACCAAATTCCTTATAGAAAATGCCGACTTTCCCTTGCTTCTCTAGCGCAGCTACGGGCTAACTAATTCATATACCCTAAGACTTTGAATGAACCTTTCCCTCCTTTTCTAACTAATTCTATACTCTCCCTCAGTTTATAACTCTGGCCCTTACACTCCCTCAGCCAGAGATTTCCTCTCCCAGGGTCAAATGGATTAGGGGATAGCAAATGGGGTTTAGTTTCAGTTGAAGTAAATATTATTATCCCCATAGATCCTATTCCTTTAGAGAGTTGGGATACGTTGGTCAAGTAAAAATGGGAAGGACCGGAAGGTAACTGGATATAGAGCGTTCGTCTCTTTTCCTTCTCTATTATGACAAGTAAGGACACACTCATTGTAATATCGATATGAACATTGTCACCAAAATTATTTATTGAGCTACAACATTATGGCGTTGCACAGCTGGTTTTCATTCCTATCACCAAATGCCATGCAATTGGTGGAAGTTTTTCTCTGGGCTACTTATCAAGTTTCCTAAAATTGTTGTTCCTTATTACACTGCTTGTATGGGTATGGTTATTCACGACATTTAATTGGAACAATGCAGGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAGTGTGAGCCAGGCCAATTTGTCAGGCGATAAATTGGAACAACTCTAAATTGTTCATGGTCGAAGTTTTTAGTTAGTCGCTGGGTCAAGTCATTATTAACCAACCCTTCTTATCCATGATTTGAAGGGACGGGACACTGATTTTTCATAATGTATTGTCCTCGATCAAAATACTAATCTTGCAGGTTGCAGGTTTTAGTTTCTTCTTTAAAGAACAATGTCTCATTCAACGGCTTCCGTTATCTTCTCTCGTGTAGTTTCAAAAGCTTTATTTTTCTTTCATTACTTGTATACATGCAAATTTCTAAACAGTGCCATTTTTGACCTTGTGTAATATCACATATGTAAATCAAATTTGCAATCTTCAGA

mRNA sequence

GGGGCACCATTTCAAGCCGCTACCCGCTTCAGAGCTTCCTCCGTGATTTTCCCGGTCGGCTTCAGGGCTTCAGGGTAGTTTATCACGATCCAATAGCGTATCACCGGCGCTGGTCATTCAAGCTAGTTTTCGACTTGGCGTTCCGTAGTATGGACGAATGAAATTTTCTGTTTCGAGCTATCAGGAGTTTCTATAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAAATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAGTGTGAGCCAGGCCAATTTGTCAGGCGATAAATTGGAACAACTCTAAATTGTTCATGGTCGAAGTTTTTAGTTAGTCGCTGGGTCAAGTCATTATTAACCAACCCTTCTTATCCATGATTTGAAGGGACGGGACACTGATTTTTCATAATGTATTGTCCTCGATCAAAATACTAATCTTGCAGGTTGCAGGTTTTAGTTTCTTCTTTAAAGAACAATGTCTCATTCAACGGCTTCCGTTATCTTCTCTCGTGTAGTTTCAAAAGCTTTATTTTTCTTTCATTACTTGTATACATGCAAATTTCTAAACAGTGCCATTTTTGACCTTGTGTAATATCACATATGTAAATCAAATTTGCAATCTTCAGA

Coding sequence (CDS)

ATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCAGTACCCCCAGAGAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACTTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACCTCTGGTCACAAATCTGAAAAATGCAGACACTTATCGAAAAAATACCTTGAATGCCGTATGGAAAAGAATTTAATGGCAAAGCAAGACATGACGGAACTGGGATTTGGAAGTGTGAGCCAGGCCAATTTGTCAGGCGATAAATTGGAACAACTCTAA

Protein sequence

MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL

Homology

[Close]

BLAST of IVF0005293 vs. ExPASy Swiss-Prot
Match: A8E4L1 (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-14
Identity = 36/82 (43.90%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MS   +F G++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YL
Sbjct: 1  MSTAMNF-GSKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSV 83
          ECRME+ LMA++ + +LGFG +
Sbjct: 61 ECRMERQLMAQEPLEKLGFGDL 81

[Close]

BLAST of IVF0005293 vs. ExPASy Swiss-Prot
Match: Q54IA0 (Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum OX=44689 GN=cox19 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.6e-14
Identity = 35/74 (47.30%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 14 RPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYLECRMEKNLMAKQD 73
          +P PP+KG FPLDH   C      Y+NCL  +   S  C   SK+YL+CRM+ NLMAK+D
Sbjct: 11 KPTPPDKGSFPLDHDSECSKPMLAYVNCLSENNGLSRFCMEFSKEYLKCRMDNNLMAKED 70

Query: 74 MTELGFGSVSQANL 88
          M   GF  V +A +
Sbjct: 71 MDNFGFEEVKKAKI 84

[Close]

BLAST of IVF0005293 vs. ExPASy Swiss-Prot
Match: Q49B96 (Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens OX=9606 GN=COX19 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.6e-14
Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MS   +F G +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK+YL
Sbjct: 1  MSTAMNF-GTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDK 92
          ECRME+ LM ++ + +LGFG ++       K
Sbjct: 61 ECRMERKLMLQEPLEKLGFGDLTSGKSEAKK 90

[Close]

BLAST of IVF0005293 vs. ExPASy Swiss-Prot
Match: O14056 (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox19 PE=3 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 9.6e-14
Identity = 38/78 (48.72%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 6  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYLE 65
          SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYL+
Sbjct: 2  SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 66 CRMEKNLMAKQDMTELGF 80
          CRM+  L  K DM  LGF
Sbjct: 62 CRMDTGLFGKDDMKNLGF 79

[Close]

BLAST of IVF0005293 vs. ExPASy Swiss-Prot
Match: Q4P821 (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=COX19 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 17 PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYLECRMEKNLMAKQDMTE 76
          PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  
Sbjct: 16 PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 77 LGFGSV 83
          LGF  V
Sbjct: 76 LGFKDV 81

[Close]

BLAST of IVF0005293 vs. ExPASy TrEMBL
Match: A0A5A7UTU4 (Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00460 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 96
          ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]

BLAST of IVF0005293 vs. ExPASy TrEMBL
Match: A0A1S3CGW0 (cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC103500603 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 96
          ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]

BLAST of IVF0005293 vs. ExPASy TrEMBL
Match: A0A6J1HMG5 (cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464297 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-44
Identity = 87/95 (91.58%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 96
          +CRMEKNLMAKQDM ELGFG++SQ +LSGDKLEQ+
Sbjct: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 95

[Close]

BLAST of IVF0005293 vs. ExPASy TrEMBL
Match: A0A6J1GP22 (cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456178 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLE 94
          ECRMEKNLMAKQDMTELGFG+ SQA+LSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTSSQASLSGDKLE 93

[Close]

BLAST of IVF0005293 vs. ExPASy TrEMBL
Match: A0A6J1KFT4 (cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494670 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 86/95 (90.53%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 96
          +CRMEKNLMAKQDM ELGFG++SQ +L GDKLEQ+
Sbjct: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLPGDKLEQV 95

[Close]

BLAST of IVF0005293 vs. NCBI nr
Match: XP_008462179.1 (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo] >KAA0059322.1 cytochrome c oxidase assembly protein COX19-like [Cucumis melo var. makuwa])

HSP 1 Score: 197 bits (501), Expect = 1.17e-63
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95
          ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]

BLAST of IVF0005293 vs. NCBI nr
Match: XP_004141761.1 (cytochrome c oxidase assembly protein COX19 [Cucumis sativus] >KAE8646473.1 hypothetical protein Csa_016084 [Cucumis sativus])

HSP 1 Score: 194 bits (492), Expect = 2.76e-62
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSK+YL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95
          ECRMEKNLMAKQDMTELGFG++SQANLSGDKLEQL
Sbjct: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 95

[Close]

BLAST of IVF0005293 vs. NCBI nr
Match: XP_038899996.1 (cytochrome c oxidase assembly protein COX19-like [Benincasa hispida])

HSP 1 Score: 187 bits (475), Expect = 1.08e-59
Identity = 89/95 (93.68%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYL+CLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLHCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95
          ECRMEKNLMAKQDMTELGFG +SQA+LSGDKLEQ+
Sbjct: 61 ECRMEKNLMAKQDMTELGFGYLSQASLSGDKLEQV 95

[Close]

BLAST of IVF0005293 vs. NCBI nr
Match: KAG6575522.1 (Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185 bits (470), Expect = 5.90e-59
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCD EKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDQEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLE 93
          ECRMEKNLMAKQDMTELGFG+ SQA+LSGDKLE
Sbjct: 61 ECRMEKNLMAKQDMTELGFGTASQASLSGDKLE 93

[Close]

BLAST of IVF0005293 vs. NCBI nr
Match: XP_022964209.1 (cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita moschata] >XP_023513825.1 cytochrome c oxidase assembly protein COX19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185 bits (470), Expect = 6.27e-59
Identity = 87/95 (91.58%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95
          +CRMEKNLMAKQDM ELGFG++SQ +LSGDKLEQ+
Sbjct: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 95

[Close]

BLAST of IVF0005293 vs. TAIR 10
Match: AT1G69750.1 (cytochrome c oxidase 19-2 )

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-37
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSKKYL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDK 92
          +CRM KNLMAKQDM ELGF  V + + + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]

BLAST of IVF0005293 vs. TAIR 10
Match: AT1G66590.1 (cytochrome c oxidase 19-1 )

HSP 1 Score: 152.5 bits (384), Expect = 1.7e-37
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 0


Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSKKYL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDK 92
          +CRM KNLMAKQDM ELGF  V + + + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]

BLAST of IVF0005293 vs. TAIR 10
Match: AT1G66590.2 (cytochrome c oxidase 19-1 )

HSP 1 Score: 150.2 bits (378), Expect = 8.3e-37
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 3   AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYLEC 62
           AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S HKSE+CRHLSKKYL+C
Sbjct: 18  AGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQC 77

Query: 63  RMEKNLMAKQDMTELGFGSVSQANLSGDK 92
           RM KNLMAKQDM ELGF  V + + + DK
Sbjct: 78  RMAKNLMAKQDMAELGFSGVKELDSTEDK 106

The following BLAST results are available for this feature:

BLAST of IVF0005293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8E4L1	1.9e-14	43.90	Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 ...	[more]
Q54IA0	9.6e-14	47.30	Cytochrome c oxidase assembly protein COX19 OS=Dictyostelium discoideum OX=44689...	[more]
Q49B96	9.6e-14	39.56	Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens OX=9606 GN=COX19 PE=...	[more]
O14056	9.6e-14	48.72	Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce...	[more]
Q4P821	1.3e-13	51.52	Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS...	[more]

BLAST of IVF0005293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UTU4	1.1e-47	100.00	Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CGW0	1.1e-47	100.00	cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1HMG5	4.2e-44	91.58	cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschat...	[more]
A0A6J1GP22	7.1e-44	94.62	cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschat...	[more]
A0A6J1KFT4	1.6e-43	90.53	cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita maxima ...	[more]

BLAST of IVF0005293 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462179.1	1.17e-63	100.00	PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo] >KAA0...	[more]
XP_004141761.1	2.76e-62	96.84	cytochrome c oxidase assembly protein COX19 [Cucumis sativus] >KAE8646473.1 hypo...	[more]
XP_038899996.1	1.08e-59	93.68	cytochrome c oxidase assembly protein COX19-like [Benincasa hispida]	[more]
KAG6575522.1	5.90e-59	94.62	Cytochrome c oxidase assembly protein COX19, partial [Cucurbita argyrosperma sub...	[more]
XP_022964209.1	6.27e-59	91.58	cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita moschata]...	[more]

BLAST of IVF0005293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69750.1	1.7e-37	74.73	cytochrome c oxidase 19-2	[more]
AT1G66590.1	1.7e-37	74.73	cytochrome c oxidase 19-1	[more]
AT1G66590.2	8.3e-37	75.28	cytochrome c oxidase 19-1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010625	CHCH	PFAM	PF06747	CHCH	coord: 31..65 e-value: 5.5E-8 score: 32.7
None	No IPR available	PANTHER	PTHR47565:SF4	CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19-LIKE	coord: 1..91
None	No IPR available	PANTHER	PTHR47565	CYTOCHROME C OXIDASE 19-1	coord: 1..91
None	No IPR available	PROSITE	PS51808	CHCH	coord: 28..70 score: 13.559404
IPR009069	Cysteine alpha-hairpin motif superfamily	SUPERFAMILY	47072	Cysteine alpha-hairpin motif	coord: 27..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005293.1	IVF0005293.1	mRNA