IVF0005273 (gene) Melon (IVF77) v1

Overview
NameIVF0005273
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 7677444 .. 7677683 (+)
RNA-Seq ExpressionIVF0005273
SyntenyIVF0005273
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAACTCCGAAAGGATGACAATGGTGCAGCTCTACCTCCGCCTCTCCAAGATGACAACAATGGTACAACTTTGTCTCCGCTTCTCCAAGACGATGACGATGGTGGTGTAGCTCCGCCACCCTCTCTTCAAGATGAAGATGACAGTGCAACTTTGCCTCCACCTCTCCAAAAGGACGATGGTACAGCTCCAAGAAGATCACGATGGGGAAAATCCACCTCTGTCTCTCCAAGATGA

mRNA sequence

ATGGTGCAACTCCGAAAGGATGACAATGGTGCAGCTCTACCTCCGCCTCTCCAAGATGACAACAATGGTACAACTTTGTCTCCGCTTCTCCAAGACGATGACGATGGTGGTGTAGCTCCGCCACCCTCTCTTCAAGATGAAGATGACAGTGCAACTTTGCCTCCACCTCTCCAAAAGGACGATGGTACAGCTCCAAGAAGATCACGATGGGGAAAATCCACCTCTGTCTCTCCAAGATGA

Coding sequence (CDS)

ATGGTGCAACTCCGAAAGGATGACAATGGTGCAGCTCTACCTCCGCCTCTCCAAGATGACAACAATGGTACAACTTTGTCTCCGCTTCTCCAAGACGATGACGATGGTGGTGTAGCTCCGCCACCCTCTCTTCAAGATGAAGATGACAGTGCAACTTTGCCTCCACCTCTCCAAAAGGACGATGGTACAGCTCCAAGAAGATCACGATGGGGAAAATCCACCTCTGTCTCTCCAAGATGA

Protein sequence

MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKDDGTAPRRSRWGKSTSVSPR
Homology
BLAST of IVF0005273 vs. ExPASy TrEMBL
Match: A0A5D3BA63 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002170 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1   MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 60
           MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD
Sbjct: 22  MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 81

Query: 61  DGTAPRRSRWGKSTSVSPR 80
           DGTAPRRSRWGKSTSVSPR
Sbjct: 82  DGTAPRRSRWGKSTSVSPR 100

BLAST of IVF0005273 vs. ExPASy TrEMBL
Match: A0A5A7T1P5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001480 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1   MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 60
           MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD
Sbjct: 191 MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 250

Query: 61  DGTAPRRSRWGKSTSVSPR 80
           DGTAPRRSRWGKSTSVSPR
Sbjct: 251 DGTAPRRSRWGKSTSVSPR 269

BLAST of IVF0005273 vs. ExPASy TrEMBL
Match: A0A5D3DZB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00410 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-11
Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0

Query: 7   DDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKDDGTAPR 66
           +D+GA L     +D++G TL   LQ DD+GGV  PPSLQDEDD A LPPPLQKD+G APR
Sbjct: 158 NDDGAIL-----EDDDGATLLLHLQ-DDNGGVTSPPSLQDEDDGAALPPPLQKDNGAAPR 217

Query: 67  RSRWGKSTSVS 78
           R RWG STS +
Sbjct: 218 RLRWGSSTSAA 222

BLAST of IVF0005273 vs. ExPASy TrEMBL
Match: A0A5A7UPA0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00380 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 1  MVQLRKDDNGAALPPPLQ----DDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPP 60
          MVQL+KDD+   LP PLQ    DDN+G  L P LQDDDDG VA PPSLQDEDD A LP P
Sbjct: 3  MVQLQKDDDDVTLPLPLQDGNDDDNDGAALPPRLQDDDDGSVALPPSLQDEDDDAALPLP 62

BLAST of IVF0005273 vs. ExPASy TrEMBL
Match: A0A1S4E5W0 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992258 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 1  MVQLRKDDNGAALPPPLQ----DDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPP 60
          MVQL+KDD+   LP PLQ    DDN+G  L P LQDDDDG VA PPSLQDEDD A LP P
Sbjct: 1  MVQLQKDDDDVTLPLPLQDGNDDDNDGAALPPRLQDDDDGSVALPPSLQDEDDDAALPLP 60

BLAST of IVF0005273 vs. NCBI nr
Match: TYJ95909.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 5.36e-50
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1   MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 60
           MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD
Sbjct: 22  MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 81

Query: 61  DGTAPRRSRWGKSTSVSPR 79
           DGTAPRRSRWGKSTSVSPR
Sbjct: 82  DGTAPRRSRWGKSTSVSPR 100

BLAST of IVF0005273 vs. NCBI nr
Match: KAA0036843.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 162 bits (410), Expect = 8.68e-48
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1   MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 60
           MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD
Sbjct: 191 MVQLRKDDNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKD 250

Query: 61  DGTAPRRSRWGKSTSVSPR 79
           DGTAPRRSRWGKSTSVSPR
Sbjct: 251 DGTAPRRSRWGKSTSVSPR 269

BLAST of IVF0005273 vs. NCBI nr
Match: KAA0066004.1 (hypothetical protein E6C27_scaffold62G00990 [Cucumis melo var. makuwa] >TYK28952.1 hypothetical protein E5676_scaffold120G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 2.60e-16
Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 0

Query: 8   DNGAALPPPLQDDNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPPLQKDDGTAPRR 67
           D+GA L     +D++G TL   LQDD+ GGV  PPSLQDEDD A LPPPLQKD+G APRR
Sbjct: 159 DDGAIL-----EDDDGATLLLHLQDDN-GGVTSPPSLQDEDDGAALPPPLQKDNGAAPRR 218

Query: 68  SRWGKSTSVS 77
            RWG STS +
Sbjct: 219 LRWGSSTSAA 222

BLAST of IVF0005273 vs. NCBI nr
Match: KAA0055465.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08947.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 3.82e-15
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 1  MVQLRKDDNGAALPPPLQD----DNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPP 59
          MVQL+KDD+   LP PLQD    DN+G  L P LQDDDDG VA PPSLQDEDD A LP P
Sbjct: 3  MVQLQKDDDDVTLPLPLQDGNDDDNDGAALPPRLQDDDDGSVALPPSLQDEDDDAALPLP 62

BLAST of IVF0005273 vs. NCBI nr
Match: XP_016903613.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 4.47e-14
Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 1  MVQLRKDDNGAALPPPLQD----DNNGTTLSPLLQDDDDGGVAPPPSLQDEDDSATLPPP 59
          MVQL+KDD+   LP PLQD    DN+G  L P LQDDDDG VA PPSLQDEDD A LP P
Sbjct: 1  MVQLQKDDDDVTLPLPLQDGNDDDNDGAALPPRLQDDDDGSVALPPSLQDEDDDAALPLP 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BA631.6e-36100.00Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5A7T1P51.6e-36100.00Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3DZB01.0e-1161.97Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UPA01.9e-1063.49Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S4E5W01.9e-1063.49uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=... [more]
Match NameE-valueIdentityDescription
TYJ95909.15.36e-50100.00putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0036843.18.68e-48100.00putative mitochondrial protein [Cucumis melo var. makuwa][more]
KAA0066004.12.60e-1662.86hypothetical protein E6C27_scaffold62G00990 [Cucumis melo var. makuwa] >TYK28952... [more]
KAA0055465.13.82e-1563.49putative mitochondrial protein [Cucumis melo var. makuwa] >TYK08947.1 putative m... [more]
XP_016903613.14.47e-1463.49PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005273.1IVF0005273.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004672 protein kinase activity