Homology
BLAST of IVF0005232 vs. ExPASy Swiss-Prot
Match:
Q5ZKQ3 (RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV=1)
HSP 1 Score: 125.6 bits (314), Expect = 1.2e-27
Identity = 110/366 (30.05%), Postives = 180/366 (49.18%), Query Frame = 0
Query: 39 RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIR 98
R + EQ A +EK+ GN YFK+ K++ AI+CY+R IA T A+ ANRAMAYLKI+
Sbjct: 272 RCIEEEQLKQKAVTEKDLGNGYFKEGKYEAAIECYTRGIAADGTNALLPANRAMAYLKIQ 331
Query: 99 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH 158
+++EAE+DCT+AL LD Y KA++RR AR LGK KEA++D E +LEP N++ +
Sbjct: 332 KYEEAENDCTQALLLDASYSKAFARRGAARVALGKLKEAMQDFEAVLKLEPGNKQAINEL 391
Query: 159 ADLRAFVGK----------AILEKAS-------------GASRSSPKDKKMLKKSDSDAK 218
+R + + A+L K S + P + +++ D D
Sbjct: 392 TKIRNELAEKEQSCHEEYPAVLIKESEIKNIVKLTHNPLNLKSTKPLRRIAVEEVDDDVL 451
Query: 219 IQDIPPVSSSTS------RTGLLAARERVERD------HLPR-------------KPELK 278
D SSSTS + + E +++D +P+ P+L
Sbjct: 452 NSDF---SSSTSLVNNWKNSVNIETTENLDQDDQLTSMDIPKAKQLKIEEITDVSSPQLP 511
Query: 279 ASVQELAS----------QAASRSMVEAAKNIIA-PTTAYQFEVSWRGFSDDQALQACLL 338
A + ++S + +++ +A + A P ++Q E +R D L
Sbjct: 512 AGAKGVSSVLHPSMNKQIERENKASFRSASPVPAIPANSFQLESDFRKLKDCPEKMYLYL 571
Query: 339 KTISPAKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISFLENLVKVPRFSILMMC 343
K I P+ P++F+ +L + I++ + F+ EEP+L + L+ L ++ RF + +M
Sbjct: 572 KQIEPSIYPKLFQKSLDPDLFNQILRILHDFYIEKEEPSLILEILQRLSELKRFDMAVMF 631
BLAST of IVF0005232 vs. ExPASy Swiss-Prot
Match:
Q9D706 (RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 6.1e-27
Identity = 106/354 (29.94%), Postives = 165/354 (46.61%), Query Frame = 0
Query: 44 EQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEA 103
+Q A +EK+ GN +FK+ K+++AI+CY+R IA T A+ ANRAMAYLKI+R++EA
Sbjct: 278 QQGRQKAIAEKDLGNGFFKEGKYEQAIECYTRGIAADRTNALLPANRAMAYLKIQRYEEA 337
Query: 104 EDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQE---------- 163
E DCT+A+ LD Y KA++RR TAR LGK EA +D E LEP N++
Sbjct: 338 ERDCTQAIVLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAATELSRIKK 397
Query: 164 --IKKQHAD---LRAFVGKAILEKASGASRSSPKDKK---------MLKKSDSDAKIQDI 223
I+K H D L + +++ R SPK K +++ D+ +
Sbjct: 398 ELIEKGHWDDVFLDSTQRHHVVKAVDNPPRGSPKALKKVFIEETGNLIETVDAPDSSATV 457
Query: 224 PPVSSSTSRTGLLAARERVERDHLP------------------RKPELKASVQELASQAA 283
P +T+ G + E LP P+ + V++ A Q
Sbjct: 458 PESDRATAAVGTGTKKNPSEGVSLPAGDRPRAKVLKIEAVSDTSAPQAQVGVKQDARQPG 517
Query: 284 SR----------SMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIF 343
S + AA P ++Q E +R + +K I P+ P++F
Sbjct: 518 SEKASVRAEQMPGQLAAAGLPPVPANSFQLESDFRQLRSSPEMLYQYVKNIEPSLYPKLF 577
BLAST of IVF0005232 vs. ExPASy Swiss-Prot
Match:
Q68FQ7 (RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE=1 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 1.8e-26
Identity = 103/354 (29.10%), Postives = 171/354 (48.31%), Query Frame = 0
Query: 50 AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTE 109
A +EK+ GN +FK+ K+++AI+CY+R IA T A+ ANRAMAYLK+++++EAE DCT+
Sbjct: 282 AIAEKDLGNGFFKEGKYEQAIECYTRGIAADSTNALLPANRAMAYLKVQKYEEAERDCTQ 341
Query: 110 ALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQE-------IKKQHAD-- 169
A+ LD Y KA++RR TAR LGK EA +D E LEP N++ IKK+ +
Sbjct: 342 AILLDGSYSKAFARRGTARTFLGKINEAKQDFETVLLLEPGNKQAVTELSRIKKELIEKG 401
Query: 170 ------LRAFVGKAILEKASGASRSSPKDKK---------MLKKSDSDAKIQDIP----- 229
L + +++ R SPK K +++ D+ +P
Sbjct: 402 RWDDVFLDSTQRHNVVKPVDSPHRGSPKALKKVFIEETGNLIESVDAPESSATVPESDRA 461
Query: 230 PVSSSTSRTGLLAARERVERDHLPR-----------------KPELKASVQELASQAASR 289
V+ T R + + V PR + ++K V++ S+ S
Sbjct: 462 AVAVDTGRKKDFSQGDSVSSGETPRAKVLKIEAVGDSSAPQAQVDVKQGVRQSVSEKTSV 521
Query: 290 SMVEAAKNIIA------PTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTA 349
+ + + A P ++Q E +R + +K I P+ P++F+ L
Sbjct: 522 RVAQTPGQLAAVVLPPVPANSFQLESDFRQLRSSPEMLYQYVKKIEPSLYPKLFQKNLDP 581
BLAST of IVF0005232 vs. ExPASy Swiss-Prot
Match:
Q9H6T3 (RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=2)
HSP 1 Score: 119.8 bits (299), Expect = 6.7e-26
Identity = 114/383 (29.77%), Postives = 185/383 (48.30%), Query Frame = 0
Query: 27 YLKQYDAVNRLS----RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIAL-SP 86
Y K+ D V + + + + +Q+ A SEK++GN +FK+ K++ AI+CY+R IA
Sbjct: 255 YPKEADIVIKSTEGERKQIEAQQNKQQAISEKDRGNGFFKEGKYERAIECYTRGIAADGA 314
Query: 87 TAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAE 146
A+ ANRAMAYLKI++++EAE DCT+A+ LD Y KA++RR TAR LGK EA +D E
Sbjct: 315 NALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFE 374
Query: 147 FAQRLEPNNQE------------IKKQHAD-------LRAFVGKAILEKASGASRSSPKD 206
LEP N++ I+K H D R V K I + + P
Sbjct: 375 TVLLLEPGNKQAVTELSKIKKELIEKGHWDDVFLDSTQRQNVVKPI-DNPPHPGSTKPLK 434
Query: 207 KKMLKKSDSDAKIQDIP-------PVSSSTSRTGLLAA-----RERVERDHL------PR 266
K +++++ + + D+P P ++ + ++AA ++ +D L PR
Sbjct: 435 KVIIEETGNLIQTIDVPDSTTAAAPENNPINLANVIAATGTTSKKNSSQDDLFPTSDTPR 494
Query: 267 KPELK-------------ASVQELASQAASRSM--------VEAAKNIIAPTTA--YQFE 326
LK AS+++ Q+ S M + A ++ P A +Q E
Sbjct: 495 AKVLKIEEVSDTSSLQPQASLKQDVCQSYSEKMPIEIEQKPAQFATTVLPPIPANSFQLE 554
Query: 327 VSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAIS 343
+R + LK I P+ P++F+ L + IVK + F+ E+P L
Sbjct: 555 SDFRQLKSSPDMLYQYLKQIEPSLYPKLFQKNLDPDVFNQIVKILHDFYIEKEKPLLIFE 614
BLAST of IVF0005232 vs. ExPASy Swiss-Prot
Match:
Q6NU95 (RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 100/365 (27.40%), Postives = 165/365 (45.21%), Query Frame = 0
Query: 39 RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIR 98
+ + +Q A +K+ GN YFK+ K++ AI+CYS+ + T A+ ANRAMAYLKI+
Sbjct: 273 KQIEIQQRKQQAIMQKDLGNAYFKEGKYEIAIECYSQGMEADNTNALLPANRAMAYLKIQ 332
Query: 99 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQ----EI 158
+++EAE DCT A++LD Y KA++RR TA LGK KEA ED E +L+P N+ E+
Sbjct: 333 KYKEAEADCTLAISLDASYCKAFARRGTASIMLGKQKEAKEDFEMVLKLDPGNKQAVLEL 392
Query: 159 KKQHADLRAF------------------------------VGKAILEKASGASR--SSPK 218
K +LR+ + + ++E+ G + ++
Sbjct: 393 AKISQELRSIEKDRNGNKDSNQRKLINTVEKLPHLRSTKPLRRMVIEEVGGPAEIFNTSL 452
Query: 219 DKKMLKKSDS----------------------DAKIQDIPPVSSSTSRTGLLAARERVER 278
+ +K+DS D IP + + G +
Sbjct: 453 KETNHRKADSVDLTAETNTQDLNQEQNICNSPDVPSPKIPKIEEISDTPG--SCEPTTGE 512
Query: 279 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 338
D+L +P + +++ + S ++ A PT ++Q E +R + L LK
Sbjct: 513 DYLTSRPSPPKIEKVVSTFSESLNIGIPA----VPTNSFQLESDFRRLKGNPDLLYVYLK 572
Query: 339 TISPAKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISFLENLVKVPRFSILMMCL 343
I P ++FK AL + DI+ + F + P L L+ L ++ RF + +M L
Sbjct: 573 QIEPTLYGKLFKKALDPDLFSDILTILREQFINKDSPDLIFEILQRLSELKRFDMAVMFL 631
BLAST of IVF0005232 vs. ExPASy TrEMBL
Match:
A0A1S3BW25 (RNA polymerase II-associated protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)
HSP 1 Score: 698.4 bits (1801), Expect = 1.7e-197
Identity = 377/410 (91.95%), Postives = 377/410 (91.95%), Query Frame = 0
Query: 1 MADSSGKHGRDHPL---------------------------------DRRQTEKASAADY 60
MADSSGKHGRDHPL DRRQTEKASAADY
Sbjct: 61 MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120
Query: 61 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120
LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240
Query: 181 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 240
PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300
Query: 241 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 300
TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF
Sbjct: 301 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 360
Query: 301 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 360
SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV
Sbjct: 361 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 420
Query: 361 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 378
PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 421 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 470
BLAST of IVF0005232 vs. ExPASy TrEMBL
Match:
A0A1S3BVH1 (RNA polymerase II-associated protein 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)
HSP 1 Score: 679.5 bits (1752), Expect = 8.1e-192
Identity = 377/448 (84.15%), Postives = 377/448 (84.15%), Query Frame = 0
Query: 1 MADSSGKHGRDHPL-----------------------DRRQTEKASAADYLKQYDAVNRL 60
MADSSGKHGRDHPL DRRQTEKASAADYLKQYDAVNRL
Sbjct: 61 MADSSGKHGRDHPLDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRL 120
Query: 61 SRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIR 120
SRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIR
Sbjct: 121 SRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIR 180
Query: 121 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH 180
RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH
Sbjct: 181 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH 240
Query: 181 ADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV 240
ADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV
Sbjct: 241 ADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV 300
Query: 241 ------------------------------------------------ERDHLPRKPELK 300
ERDHLPRKPELK
Sbjct: 301 EENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALERDHLPRKPELK 360
Query: 301 ASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQI 360
ASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQI
Sbjct: 361 ASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQI 420
Query: 361 FKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIW 378
FKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIW
Sbjct: 421 FKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIW 480
BLAST of IVF0005232 vs. ExPASy TrEMBL
Match:
A0A1S3BWU0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494093 PE=4 SV=1)
HSP 1 Score: 675.6 bits (1742), Expect = 1.2e-190
Identity = 377/458 (82.31%), Postives = 377/458 (82.31%), Query Frame = 0
Query: 1 MADSSGKHGRDHPL---------------------------------DRRQTEKASAADY 60
MADSSGKHGRDHPL DRRQTEKASAADY
Sbjct: 61 MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120
Query: 61 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120
LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240
Query: 181 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 240
PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300
Query: 241 TGLLAARERV------------------------------------------------ER 300
TGLLAARERV ER
Sbjct: 301 TGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALER 360
Query: 301 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 360
DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK
Sbjct: 361 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 420
Query: 361 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 378
TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS
Sbjct: 421 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 480
BLAST of IVF0005232 vs. ExPASy TrEMBL
Match:
A0A5D3B9C0 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001060 PE=4 SV=1)
HSP 1 Score: 663.7 bits (1711), Expect = 4.6e-187
Identity = 363/411 (88.32%), Postives = 363/411 (88.32%), Query Frame = 0
Query: 15 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 74
DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS
Sbjct: 62 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 121
Query: 75 RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 134
RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK
Sbjct: 122 RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 181
Query: 135 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 194
EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK
Sbjct: 182 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 241
Query: 195 IQDIPPVSSSTSRTGLLAARERV------------------------------------- 254
IQDIPPVSSSTSRTGLLAARERV
Sbjct: 242 IQDIPPVSSSTSRTGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGF 301
Query: 255 -----------ERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 314
ERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG
Sbjct: 302 HKDSSSYLWALERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 361
Query: 315 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 374
FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK
Sbjct: 362 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 421
Query: 375 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 378
VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 422 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 472
BLAST of IVF0005232 vs. ExPASy TrEMBL
Match:
A0A5A7TYG9 (RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001440 PE=4 SV=1)
HSP 1 Score: 656.8 bits (1693), Expect = 5.6e-185
Identity = 362/411 (88.08%), Postives = 362/411 (88.08%), Query Frame = 0
Query: 15 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 74
DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS
Sbjct: 62 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 121
Query: 75 RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 134
RSIALSPTAVAFANRAMAYLKIRR QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK
Sbjct: 122 RSIALSPTAVAFANRAMAYLKIRR-QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 181
Query: 135 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 194
EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK
Sbjct: 182 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 241
Query: 195 IQDIPPVSSSTSRTGLLAARERV------------------------------------- 254
IQDIPPVSSSTSRTGLLAARERV
Sbjct: 242 IQDIPPVSSSTSRTGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGF 301
Query: 255 -----------ERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 314
ERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG
Sbjct: 302 HKDSSSYLWALERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 361
Query: 315 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 374
FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK
Sbjct: 362 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 421
Query: 375 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 378
VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 422 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 471
BLAST of IVF0005232 vs. NCBI nr
Match:
XP_008453365.2 (PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Cucumis melo])
HSP 1 Score: 698 bits (1801), Expect = 5.25e-251
Identity = 377/410 (91.95%), Postives = 377/410 (91.95%), Query Frame = 0
Query: 1 MADSSGKHGRDHPLD---------------------------------RRQTEKASAADY 60
MADSSGKHGRDHPLD RRQTEKASAADY
Sbjct: 61 MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120
Query: 61 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120
LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240
Query: 181 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 240
PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300
Query: 241 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 300
TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF
Sbjct: 301 TGLLAARERVERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGF 360
Query: 301 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 360
SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV
Sbjct: 361 SDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKV 420
Query: 361 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 377
PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 421 PRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 470
BLAST of IVF0005232 vs. NCBI nr
Match:
XP_008453357.2 (PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Cucumis melo])
HSP 1 Score: 679 bits (1752), Expect = 6.06e-243
Identity = 377/448 (84.15%), Postives = 377/448 (84.15%), Query Frame = 0
Query: 1 MADSSGKHGRDHPLD-----------------------RRQTEKASAADYLKQYDAVNRL 60
MADSSGKHGRDHPLD RRQTEKASAADYLKQYDAVNRL
Sbjct: 61 MADSSGKHGRDHPLDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADYLKQYDAVNRL 120
Query: 61 SRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIR 120
SRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIR
Sbjct: 121 SRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIR 180
Query: 121 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH 180
RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH
Sbjct: 181 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQH 240
Query: 181 ADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV 240
ADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV
Sbjct: 241 ADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLAARERV 300
Query: 241 E------------------------------------------------RDHLPRKPELK 300
E RDHLPRKPELK
Sbjct: 301 EENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALERDHLPRKPELK 360
Query: 301 ASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQI 360
ASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQI
Sbjct: 361 ASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQI 420
Query: 361 FKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIW 377
FKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIW
Sbjct: 421 FKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSSSEKFDLLKIW 480
BLAST of IVF0005232 vs. NCBI nr
Match:
XP_008453348.2 (PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo])
HSP 1 Score: 675 bits (1742), Expect = 2.89e-241
Identity = 377/458 (82.31%), Postives = 377/458 (82.31%), Query Frame = 0
Query: 1 MADSSGKHGRDHPLD---------------------------------RRQTEKASAADY 60
MADSSGKHGRDHPLD RRQTEKASAADY
Sbjct: 61 MADSSGKHGRDHPLDFQGFLNDLQDWEVSFKGKDKKLKPQAIGKEKEDRRQTEKASAADY 120
Query: 61 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 120
LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA
Sbjct: 121 LKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFA 180
Query: 121 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 180
NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE
Sbjct: 181 NRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLE 240
Query: 181 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 240
PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR
Sbjct: 241 PNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSR 300
Query: 241 TGLLAARERVE------------------------------------------------R 300
TGLLAARERVE R
Sbjct: 301 TGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGFHKDSSSYLWALER 360
Query: 301 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 360
DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK
Sbjct: 361 DHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLK 420
Query: 361 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 377
TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS
Sbjct: 421 TISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVKVPRFSILMMCLSS 480
BLAST of IVF0005232 vs. NCBI nr
Match:
TYJ96462.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 662 bits (1708), Expect = 8.14e-237
Identity = 363/411 (88.32%), Postives = 363/411 (88.32%), Query Frame = 0
Query: 15 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 74
DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS
Sbjct: 62 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 121
Query: 75 RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 134
RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK
Sbjct: 122 RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 181
Query: 135 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 194
EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK
Sbjct: 182 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 241
Query: 195 IQDIPPVSSSTSRTGLLAARERVE------------------------------------ 254
IQDIPPVSSSTSRTGLLAARERVE
Sbjct: 242 IQDIPPVSSSTSRTGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGF 301
Query: 255 ------------RDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 314
RDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG
Sbjct: 302 HKDSSSYLWALERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 361
Query: 315 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 374
FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK
Sbjct: 362 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 421
Query: 375 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 377
VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 422 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 472
BLAST of IVF0005232 vs. NCBI nr
Match:
KAA0048074.1 (RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 655 bits (1690), Expect = 4.31e-234
Identity = 362/411 (88.08%), Postives = 362/411 (88.08%), Query Frame = 0
Query: 15 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 74
DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS
Sbjct: 62 DRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYS 121
Query: 75 RSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 134
RSIALSPTAVAFANRAMAYLKIRR QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK
Sbjct: 122 RSIALSPTAVAFANRAMAYLKIRR-QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK 181
Query: 135 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 194
EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK
Sbjct: 182 EALEDAEFAQRLEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAK 241
Query: 195 IQDIPPVSSSTSRTGLLAARERVE------------------------------------ 254
IQDIPPVSSSTSRTGLLAARERVE
Sbjct: 242 IQDIPPVSSSTSRTGLLAARERVEENGGENAVKTSARVEENEDISTRAEIACKKVATNGF 301
Query: 255 ------------RDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 314
RDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG
Sbjct: 302 HKDSSSYLWALERDHLPRKPELKASVQELASQAASRSMVEAAKNIIAPTTAYQFEVSWRG 361
Query: 315 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 374
FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK
Sbjct: 362 FSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISFLENLVK 421
Query: 375 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 377
VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Sbjct: 422 VPRFSILMMCLSSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ 471
BLAST of IVF0005232 vs. TAIR 10
Match:
AT1G56440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 378.6 bits (971), Expect = 5.7e-105
Identity = 217/419 (51.79%), Postives = 283/419 (67.54%), Query Frame = 0
Query: 26 DYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVA 85
D+ K+Y ++ LS + E S +D++SEKEQGNE+FKQKKF EAIDCYSRSIALSP AV
Sbjct: 61 DFAKKYRSIRDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120
Query: 86 FANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 145
+ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180
Query: 146 LEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQD-------- 205
LEP +QE+KKQ+AD+++ + K I+EKA+GA +S+ ++ +LK S D KIQ
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQE--LLKTSGLDKKIQKPKTEMTSK 240
Query: 206 ------------IPPVSSSTSRTG-------------------------------LLAAR 265
+ PV S +G +
Sbjct: 241 PVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEEKSKEGSMKIPAITEILDSKKVTPGS 300
Query: 266 ERVERDHLP----------------RKPELKASVQELASQAASRSMVEAAKNIIAPTTAY 325
+ E++ P ++ ELK SVQELA+ AAS +M EA+KNI P +AY
Sbjct: 301 QSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAHAASLAMTEASKNIKTPKSAY 360
Query: 326 QFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAPILIDIVKCVATFFTEEPALAI 378
+FE SWR FS D AL++ LLK +P+ LPQIFKNALT+P+L+DI+KCVA+FFTE+ LA+
Sbjct: 361 EFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPVLVDIIKCVASFFTEDMDLAV 420
BLAST of IVF0005232 vs. TAIR 10
Match:
AT1G56440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 372.9 bits (956), Expect = 3.1e-103
Identity = 218/439 (49.66%), Postives = 285/439 (64.92%), Query Frame = 0
Query: 26 DYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVA 85
D+ K+Y ++ LS + E S +D++SEKEQGNE+FKQKKF EAIDCYSRSIALSP AV
Sbjct: 61 DFAKKYRSIRDLSSSLIGE-SLLDSSSEKEQGNEFFKQKKFNEAIDCYSRSIALSPNAVT 120
Query: 86 FANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQR 145
+ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG KEA EDAEFA R
Sbjct: 121 YANRAMAYLKIKRYREAEVDCTEALNLDDRYIKAYSRRATARKELGMIKEAKEDAEFALR 180
Query: 146 LEPNNQEIKKQHADLRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSST 205
LEP +QE+KKQ+AD+++ + K I+EKA+GA +S+ ++ +LK S D KIQ P + T
Sbjct: 181 LEPESQELKKQYADIKSLLEKEIIEKATGAMQSTAQE--LLKTSGLDKKIQ--KPKTEMT 240
Query: 206 SRTGLLAAR---------------------ERVERDH----------------------- 265
S+ L A+ E ++ +H
Sbjct: 241 SKPVTLVAKTNRDIVQPVLGSNESSGKKLIENIQPEHRWNFRELISLYLSCYLQEKSKEG 300
Query: 266 -------------------------------------------LPRKPELKASVQELASQ 325
+ ++ ELK SVQELA+
Sbjct: 301 SMKIPAITEILDSKKVTPGSQSYEKEAKPSDRNGTQPSGPENQVSKQLELKPSVQELAAH 360
Query: 326 AASRSMVEAAKNIIAPTTAYQFEVSWRGFSDDQALQACLLKTISPAKLPQIFKNALTAPI 378
AAS +M EA+KNI P +AY+FE SWR FS D AL++ LLK +P+ LPQIFKNALT+P+
Sbjct: 361 AASLAMTEASKNIKTPKSAYEFENSWRSFSGDSALRSQLLKVTTPSSLPQIFKNALTSPV 420
BLAST of IVF0005232 vs. TAIR 10
Match:
AT3G17970.1 (translocon at the outer membrane of chloroplasts 64-III )
HSP 1 Score: 96.7 bits (239), Expect = 4.3e-20
Identity = 66/160 (41.25%), Postives = 91/160 (56.88%), Query Frame = 0
Query: 6 GKHGRDH-PLDRRQTEKASAADYLKQYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQK 65
G+HG D LD QT S +Y + E+S A KE+GN+ FK+K
Sbjct: 432 GRHGGDRFLLDTVQTMYPSLQEYSSIVTDPKSSKKAITKEES---AEIAKEKGNQAFKEK 491
Query: 66 KFKEAIDCYSRSIALSP-TAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRR 125
+++AI YS +I LS A ++NRA AYL++ F +AE+DCT+A+ LD + +KAY RR
Sbjct: 492 LWQKAIGLYSEAIKLSDNNATYYSNRAAAYLELGGFLQAEEDCTKAITLDKKNVKAYLRR 551
Query: 126 ATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHADLRAF 164
TAR+ LG K A+ED +A LEPNN+ LR F
Sbjct: 552 GTAREMLGDCKGAIEDFRYALVLEPNNKRASLSAERLRKF 588
BLAST of IVF0005232 vs. TAIR 10
Match:
AT2G42810.1 (protein phosphatase 5.2 )
HSP 1 Score: 80.5 bits (197), Expect = 3.2e-15
Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 0
Query: 42 QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRF 101
+ E S V A E K Q NE FK K+ AID Y+++I L S AV +ANRA A+ K+ +
Sbjct: 4 KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63
Query: 102 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAD 161
A D ++A+ +D RY K Y RR A +GK K+AL+D + +RL PN+ + ++ +
Sbjct: 64 GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123
Query: 162 LRAFVGKAILEKA 173
V K E+A
Sbjct: 124 CEKAVMKLKFEEA 136
BLAST of IVF0005232 vs. TAIR 10
Match:
AT2G42810.2 (protein phosphatase 5.2 )
HSP 1 Score: 80.5 bits (197), Expect = 3.2e-15
Identity = 61/173 (35.26%), Postives = 93/173 (53.76%), Query Frame = 0
Query: 42 QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRF 101
+ E S V A E K Q NE FK K+ AID Y+++I L S AV +ANRA A+ K+ +
Sbjct: 4 KNENSDVSRAEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEY 63
Query: 102 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPNNQEIKKQHAD 161
A D ++A+ +D RY K Y RR A +GK K+AL+D + +RL PN+ + ++ +
Sbjct: 64 GSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDALKDFQQVKRLSPNDPDATRKLKE 123
Query: 162 LRAFVGKAILEKASGASRSSPKDKKMLKKSDSDAKIQDIPPVSSSTSRTGLLA 213
V K E+A S +++ + +S I + P SS ++T L A
Sbjct: 124 CEKAVMKLKFEEAISVPVS---ERRSVAESIDFHTIGNKPRSSSMPTKTALAA 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q5ZKQ3 | 1.2e-27 | 30.05 | RNA polymerase II-associated protein 3 OS=Gallus gallus OX=9031 GN=RPAP3 PE=2 SV... | [more] |
Q9D706 | 6.1e-27 | 29.94 | RNA polymerase II-associated protein 3 OS=Mus musculus OX=10090 GN=Rpap3 PE=1 SV... | [more] |
Q68FQ7 | 1.8e-26 | 29.10 | RNA polymerase II-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Rpap3 PE... | [more] |
Q9H6T3 | 6.7e-26 | 29.77 | RNA polymerase II-associated protein 3 OS=Homo sapiens OX=9606 GN=RPAP3 PE=1 SV=... | [more] |
Q6NU95 | 1.3e-21 | 27.40 | RNA polymerase II-associated protein 3 OS=Xenopus laevis OX=8355 GN=rpap3 PE=2 S... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BW25 | 1.7e-197 | 91.95 | RNA polymerase II-associated protein 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A1S3BVH1 | 8.1e-192 | 84.15 | RNA polymerase II-associated protein 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A1S3BWU0 | 1.2e-190 | 82.31 | RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC... | [more] |
A0A5D3B9C0 | 4.6e-187 | 88.32 | RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX... | [more] |
A0A5A7TYG9 | 5.6e-185 | 88.08 | RNA polymerase II-associated protein 3 isoform X1 OS=Cucumis melo var. makuwa OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_008453365.2 | 5.25e-251 | 91.95 | PREDICTED: RNA polymerase II-associated protein 3 isoform X3 [Cucumis melo] | [more] |
XP_008453357.2 | 6.06e-243 | 84.15 | PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Cucumis melo] | [more] |
XP_008453348.2 | 2.89e-241 | 82.31 | PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo] | [more] |
TYJ96462.1 | 8.14e-237 | 88.32 | RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa] | [more] |
KAA0048074.1 | 4.31e-234 | 88.08 | RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo var. makuwa] | [more] |