IVF0005168 (gene) Melon (IVF77) v1

Overview


Name	IVF0005168
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr08: 25825382 .. 25827362 (-)
RNA-Seq Expression	IVF0005168
Synteny	IVF0005168

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGATGGCGATTATGGGGTTGTTTTAAACGCTCGTTCCTCTTCCCCACTAAACTGTTTTTCTCAAACTAAACTCACACCTTCTCCGTAAGCCTAAAGGTAACCTCTTTCTCTCTAACTTGTTTCTGAAATAGTTGAGAAGGAACGCAATTTCCTTTCTCTCTTGGGATTGTTTTATCCGTTTCCCCTGATGAAAGCTTGTTTAATGGCAGGCAATGGGAATGGGCTACTAAGCCTCTACAAGGATATAGAGTCTTGCGGAGAGTACAGAGATATCCAAGTAATGTGGGATATGATTCAGTCCCACAATGTCCATGAAAACACAAGTAGAAGCTTAAGAAGATTGAGGTTTTCTTCAACTTGGAGATCCCTCTGTTTCCAGCCTACTTGCTGAAAGCAGGTTCTTGATGAAAACAGAACCTGCTTTCATCTTCTCTGCACAAAACCACAGAATGTAAATATATAGATAATAATAAGGAAATAGTTGCTTTGGGAATGTGGGAGTTTTCACTCAAGCTCACAAAGCTTGTCTTTGATTGATATGTTCCCTATGTTTCACTTTCATCAGATGACGAGAAGAGCTTCGGATAGATACCTGTTTTTCGATTTCATCAACATTTGCAGAACAACCCTGCTGATGTTGTTCATAATCTGCAAGAAAATTTTGGTACTTGTTTGGTTTTTACTCATCAGTTGAAGATGTTTAACTGTGTGGGTTTTGGTCTGTTTTCTTGTTGTGTTGGTCTGATTTTTTGATAAAATTGGTCCTTGCTTTTAGCCATTCATTTGCAGATACCACATTGGACAAGAATGTAAAGCCAAAAGCTTACTTGGGAGGAAACTATTAGCTATACTTATTATATTACAGAATCAAAATTTAATGATTGATATATCATATATGTGTGCATGCACCTACTTTTTAAGTATCTACATATGGTTTCATCTCACTCTTTAGTTGTAACACAATATCAGTTCGTTGGGCTTTGGGTATAATTACAAACGTTACTGTCAAAATCAGCATAGCTCAATTGGCATACACAAATATACAAATGTCACCTTGTGTTTATAGTTGTCGTTAGTTCAATAATAGCCAACTAGAACATAAATACACTAGTTAAAACATCATAACTGTCCAAAAGAACATAAATACACTAGTTAAAACATCATAACTGTCCAAAAGAACATAAATACACTAGTTAAAACATCATAACTGTCCAAAAGATGGTCGAGTTTCACCTTGCCGGTAGCTTGTAAATCTGACTCATTTCTCTTGAATGTAAAGTAAGTTTTAAACAAGTGAAATCTGCTAAATTATAAGAATGCCAAGGAGCTAAGGCAGAGTAATAAAGAACGATTTCTGGAGAAACTCAAACGGAGAAGCTGTAATTTCCATTGTCTTGGTTCGATTCTTCATGGATGGAATTTAGTTTGAAACAACTCTCCAATCTTTAGACGGGGTCCATGGGCTTTATTGGCTCCTAAATCCTCATCTTTCTGGCCCTCATGTTCTAATTTTCATCAATGAGAAAGAAATATAGTTCATGTTCTAATTTTCATCAATGAGAAAGAAATATAGTGTCTAGGAGAAAGAAATCAAGCCTGTCAATTGTCATTGGGAGGAAAAGAGAGATCCGACTTTAACAGTTAAGGAATTCAAAGTACTAGAAGATGCTGCTTGAATTTGACTGGAGAATAATAGATAAAGATGAGAAAAACAACGGATCAGCCAATTTGCCATTACAAACAACATGATCAGCTAACACAATACTTGTTGGCATCATATGCTTAATTATGGTTTTTTCAATTTAAGATAAAGTTCCATGGTCGAATTTTTGTATGGATAACCTACTTTTCAAGGCTCAAATGAGATTTGACCCAACATTTGAAAATCGAAGTTTTCTGTTCTTCTGCTTATGCCACCCCTAGATAAAGGAATGTTAATATGGTTACTAGAATGGGTATGTTAGCAATTAGTTAG

mRNA sequence

ATGAAGAGATGGCGATTATGGGGTTGTTTTAAACGCTCGTTCCTCTTCCCCACTAAACTCCTCTACAAGGATATAGAGTCTTGCGGAGAGTACAGAGATATCCAAGTAATGTGGGATATGATTCAGTCCCACAATGTCCATGAAAACACAAGTAGAAGCTTAAGAAGATTGAGTTAG

Coding sequence (CDS)

ATGAAGAGATGGCGATTATGGGGTTGTTTTAAACGCTCGTTCCTCTTCCCCACTAAACTCCTCTACAAGGATATAGAGTCTTGCGGAGAGTACAGAGATATCCAAGTAATGTGGGATATGATTCAGTCCCACAATGTCCATGAAAACACAAGTAGAAGCTTAAGAAGATTGAGTTAG

Protein sequence

MKRWRLWGCFKRSFLFPTKLLYKDIESCGEYRDIQVMWDMIQSHNVHENTSRSLRRLS

Homology

[Close]

BLAST of IVF0005168 vs. ExPASy TrEMBL
Match: A0A0A0KY16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312850 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.1e-22
Identity = 56/78 (71.79%), Postives = 56/78 (71.79%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 57
          MKRWRLWGCFKRSFLFPTKL                      LYKDIESCGEYRDIQVMW
Sbjct: 1  MKRWRLWGCFKRSFLFPTKLFFLRLNSHLLHKPKGNGNALLSLYKDIESCGEYRDIQVMW 60

[Close]

BLAST of IVF0005168 vs. ExPASy TrEMBL
Match: A0A314YB56 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_33068 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-08
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 57
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLKLTSRSRNKAKGNGHGLVSLYKDMESCGEYEDIRVMW 73

[Close]

BLAST of IVF0005168 vs. ExPASy TrEMBL
Match: A0A314XZ80 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_28211 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-08
Identity = 36/78 (46.15%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 57
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLKLTSRSRNKAKGNGHGLVSLYKDMESCGEYEDIRVMW 73

[Close]

BLAST of IVF0005168 vs. ExPASy TrEMBL
Match: A0A5E4EEZ9 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B024966 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-08
Identity = 36/80 (45.00%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 59
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLQLTSRSRNKAKGNGHGLVNLYKDMESCGEYEDIRVMW 73

[Close]

BLAST of IVF0005168 vs. ExPASy TrEMBL
Match: A0A6J5XW64 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39900 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.8e-08
Identity = 36/80 (45.00%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 59
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLKLTSRSRNKAKGNGHGLVNLYKDMESCGEYEDIRVMW 73

[Close]

BLAST of IVF0005168 vs. NCBI nr
Match: KAE8649569.1 (hypothetical protein Csa_018089 [Cucumis sativus])

HSP 1 Score: 116 bits (291), Expect = 2.54e-32
Identity = 58/80 (72.50%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 58
          MKRWRLWGCFKRSFLFPTKL                      LYKDIESCGEYRDIQVMW
Sbjct: 1  MKRWRLWGCFKRSFLFPTKLFFLRLNSHLLHKPKGNGNALLSLYKDIESCGEYRDIQVMW 60

[Close]

BLAST of IVF0005168 vs. NCBI nr
Match: KAG7033756.1 (hypothetical protein SDJN02_03481, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 75.1 bits (183), Expect = 4.07e-16
Identity = 38/65 (58.46%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 43
          MK WRLW C KRSFL PTKL                      LYKDIESCGEYRDIQVMW
Sbjct: 1  MKGWRLWDCLKRSFLLPTKLFLLRVNSRHLVQPKGNGKGLGSLYKDIESCGEYRDIQVMW 60

[Close]

BLAST of IVF0005168 vs. NCBI nr
Match: PQQ03020.1 (hypothetical protein Pyn_33068 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 68.9 bits (167), Expect = 2.52e-13
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 56
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLKLTSRSRNKAKGNGHGLVSLYKDMESCGEYEDIRVMW 73

[Close]

BLAST of IVF0005168 vs. NCBI nr
Match: CAB4315264.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 67.8 bits (164), Expect = 7.20e-13
Identity = 36/80 (45.00%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 58
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLKLTSRSRNKAKGNGHGLVNLYKDMESCGEYEDIRVMW 73

[Close]

BLAST of IVF0005168 vs. NCBI nr
Match: VVA14315.1 (PREDICTED: unknown [Prunus dulcis])

HSP 1 Score: 67.8 bits (164), Expect = 7.20e-13
Identity = 36/80 (45.00%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 1  MKRWRLWGCFKRSFLFPTKL----------------------LYKDIESCGEYRDIQVMW 58
          M  WR W CFKRSFL PTK                       LYKD+ESCGEY DI+VMW
Sbjct: 14 MMGWRTWMCFKRSFLLPTKCFLLQLTSRSRNKAKGNGHGLVNLYKDMESCGEYEDIRVMW 73

The following BLAST results are available for this feature:

BLAST of IVF0005168 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0005168 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY16	6.1e-22	71.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G312850 PE=4 SV=1	[more]
A0A314YB56	1.7e-08	47.44	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_330...	[more]
A0A314XZ80	3.8e-08	46.15	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_282...	[more]
A0A5E4EEZ9	3.8e-08	45.00	Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B024966 PE=4 SV=1	[more]
A0A6J5XW64	3.8e-08	45.00	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39900 PE=...	[more]

BLAST of IVF0005168 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649569.1	2.54e-32	72.50	hypothetical protein Csa_018089 [Cucumis sativus]	[more]
KAG7033756.1	4.07e-16	58.46	hypothetical protein SDJN02_03481, partial [Cucurbita argyrosperma subsp. argyro...	[more]
PQQ03020.1	2.52e-13	47.44	hypothetical protein Pyn_33068 [Prunus yedoensis var. nudiflora]	[more]
CAB4315264.1	7.20e-13	45.00	unnamed protein product [Prunus armeniaca]	[more]
VVA14315.1	7.20e-13	45.00	PREDICTED: unknown [Prunus dulcis]	[more]

BLAST of IVF0005168 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181:SF15	SUBFAMILY NOT NAMED	coord: 21..54
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 21..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005168.1	IVF0005168.1	mRNA