IVF0005103 (gene) Melon (IVF77) v1

Overview


Name	IVF0005103
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr02: 17870142 .. 17870615 (+)
RNA-Seq Expression	IVF0005103
Synteny	IVF0005103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGATGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTTCTACGACACAAACACAAAGTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGAGGCAGGATATTGTGATTTTGAGGTCGGTATAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTAAGTCCATCAACTTCTTACATGCATGGACATAGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAAAGTCGACGTCGACAACCAACTCGAAATCGACGATGTCCGGGTTGTGGAACACATTGA

mRNA sequence

ATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGATGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTTCTACGACACAAACACAAAGTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGAGGCAGGATATTGTGATTTTGAGGTCGGTATAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTAAGTCCATCAACTTCTTACATGCATGGACATAGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAAAGTCGACGTCGACAACCAACTCGAAATCGACGATGTCCGGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGATGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTTCTACGACACAAACACAAAGTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGAGGCAGGATATTGTGATTTTGAGGTCGGTATAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACGTGGATGTAAGTCCATCAACTTCTTACATGCATGGACATAGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAAAGTCGACGTCGACAACCAACTCGAAATCGACGATGTCCGGGTTGTGGAACACATTGA

Protein sequence

MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH

Homology

[Close]

BLAST of IVF0005103 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT
Sbjct: 54  MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 113

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR
Sbjct: 114 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 173

Query: 121 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 158
           QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH
Sbjct: 174 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 210

[Close]

BLAST of IVF0005103 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT
Sbjct: 66  MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 125

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGH RGYGEHNEYLYHEAPADVSDR
Sbjct: 126 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAPADVSDR 185

Query: 121 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 158
           QEYQQEPENQEDREQHRVQSRRRQPTRNRR PGCGTH
Sbjct: 186 QEYQQEPENQEDREQHRVQSRRRQPTRNRRRPGCGTH 222

[Close]

BLAST of IVF0005103 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           ME+IHN+YDLPIVPPPVHR   RVEEAELD+VYHNVEEVP TTQTQSQTGYGSPMTMMPT
Sbjct: 344 MEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPT 403

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           F AGYCD EV IGYYDA VGP SSY+DV PSTSYM+GH RGYGEHNEYLYHEAP DVSDR
Sbjct: 404 FGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRGYGEHNEYLYHEAPTDVSDR 463

Query: 121 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 158
           QEYQQEP+NQEDREQHRVQSRRRQP RNR+C GCGTH
Sbjct: 464 QEYQQEPKNQEDREQHRVQSRRRQPARNRQCSGCGTH 500

[Close]

BLAST of IVF0005103 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 8.9e-68
Identity = 132/151 (87.42%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 7   MYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYC 66
           MYDLPIVPP VHRG VRVEE ELD+VYHNVEEVP TTQTQSQTGYGSPM MMPTF AGYC
Sbjct: 1   MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60

Query: 67  DFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDRQEYQQE 126
           D EV  GYYDAG+GP SSY+DV PS SYMHGH RGYGEHNEYLYHEAPADVSDRQEYQQE
Sbjct: 61  DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAPADVSDRQEYQQE 120

Query: 127 PENQEDREQHRVQSRRRQPTRNRRCPGCGTH 158
           PENQEDREQHRVQSRRRQPTRNRR   CGTH
Sbjct: 121 PENQEDREQHRVQSRRRQPTRNRRHLSCGTH 151

[Close]

BLAST of IVF0005103 vs. ExPASy TrEMBL
Match: A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.4e-59
Identity = 115/141 (81.56%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           MEEIHNMY LPIVPP +HRG V+VEEAELD+VYHNVEE+  TTQ Q+QTGYGSPM MMPT
Sbjct: 63  MEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSPMIMMPT 122

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           F  GYCDFEV   YYD+GVGPSSSY+DV PSTSYMHGHR  YGEHNEYLYHEAP +VSDR
Sbjct: 123 FGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYGEHNEYLYHEAPTEVSDR 182

Query: 121 QEYQQEPENQEDREQHRVQSR 142
           QEYQQEPENQE+ EQHRVQSR
Sbjct: 183 QEYQQEPENQEELEQHRVQSR 203

[Close]

BLAST of IVF0005103 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 327 bits (837), Expect = 4.17e-112
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT
Sbjct: 54  MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 113

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR
Sbjct: 114 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 173

Query: 121 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 157
           QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH
Sbjct: 174 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 210

[Close]

BLAST of IVF0005103 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (819), Expect = 3.51e-109
Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT
Sbjct: 66  MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 125

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGH RGYGEHNEYLYHEAPADVSDR
Sbjct: 126 FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAPADVSDR 185

Query: 121 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 157
           QEYQQEPENQEDREQHRVQSRRRQPTRNRR PGCGTH
Sbjct: 186 QEYQQEPENQEDREQHRVQSRRRQPTRNRRRPGCGTH 222

[Close]

BLAST of IVF0005103 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (683), Expect = 1.63e-89
Identity = 132/151 (87.42%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 7   MYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPTFEAGYC 66
           MYDLPIVPP VHRG VRVEE ELD+VYHNVEEVP TTQTQSQTGYGSPM MMPTF AGYC
Sbjct: 1   MYDLPIVPPRVHRGRVRVEEVELDEVYHNVEEVPPTTQTQSQTGYGSPMMMMPTFGAGYC 60

Query: 67  DFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDRQEYQQE 126
           D EV  GYYDAG+GP SSY+DV PS SYMHGH RGYGEHNEYLYHEAPADVSDRQEYQQE
Sbjct: 61  DSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAPADVSDRQEYQQE 120

Query: 127 PENQEDREQHRVQSRRRQPTRNRRCPGCGTH 157
           PENQEDREQHRVQSRRRQPTRNRR   CGTH
Sbjct: 121 PENQEDREQHRVQSRRRQPTRNRRHLSCGTH 151

[Close]

BLAST of IVF0005103 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 279 bits (714), Expect = 1.86e-89
Identity = 136/157 (86.62%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           ME+IHN+YDLPIVPPPVHR   RVEEAELD+VYHNVEEVP TTQTQSQTGYGSPMTMMPT
Sbjct: 344 MEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPT 403

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           F AGYCD EV IGYYDA VGP SSY+DV PSTSYM+GH RGYGEHNEYLYHEAP DVSDR
Sbjct: 404 FGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRGYGEHNEYLYHEAPTDVSDR 463

Query: 121 QEYQQEPENQEDREQHRVQSRRRQPTRNRRCPGCGTH 157
           QEYQQEP+NQEDREQHRVQSRRRQP RNR+C GCGTH
Sbjct: 464 QEYQQEPKNQEDREQHRVQSRRRQPARNRQCSGCGTH 500

[Close]

BLAST of IVF0005103 vs. NCBI nr
Match: KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 1.28e-77
Identity = 115/141 (81.56%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTMMPT 60
           MEEIHNMY LPIVPP +HRG V+VEEAELD+VYHNVEE+  TTQ Q+QTGYGSPM MMPT
Sbjct: 63  MEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSPMIMMPT 122

Query: 61  FEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGYGEHNEYLYHEAPADVSDR 120
           F  GYCDFEV   YYD+GVGPSSSY+DV PSTSYMHGHR  YGEHNEYLYHEAP +VSDR
Sbjct: 123 FGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYGEHNEYLYHEAPTEVSDR 182

Query: 121 QEYQQEPENQEDREQHRVQSR 141
           QEYQQEPENQE+ EQHRVQSR
Sbjct: 183 QEYQQEPENQEELEQHRVQSR 203

The following BLAST results are available for this feature:

BLAST of IVF0005103 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0005103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSG8	1.2e-85	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7V342	1.5e-83	98.73	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3DJV7	2.3e-71	86.62	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3CXX3	8.9e-68	87.42	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7SLF8	3.4e-59	81.56	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of IVF0005103 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01176.1	4.17e-112	100.00	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
KAA0062642.1	3.51e-109	98.73	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0049532.1	1.63e-89	87.42	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK23842.1	1.86e-89	86.62	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0025972.1	1.28e-77	81.56	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of IVF0005103 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0005103.1	IVF0005103.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance