IVF0005078 (gene) Melon (IVF77) v1

Overview
NameIVF0005078
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 30899942 .. 30900591 (-)
RNA-Seq ExpressionIVF0005078
SyntenyIVF0005078
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTGCATTTTGCTAATCCTGATACGTTAGTTGTGGTCTATGATTCTTCAAATGAAGATCACATTACTATTGACATCTTTTGCATCATCCTTGAAGGGCTCCTATTGCATTTCCTCGCCGCCCTCCTTATGGTTCCTCTGATTCCACTAAGAAGGTCTTTGCTACCTCTGTTAGAGTTTTTACTTCAAATGTTGATGAGTTTGTTCTTGGTAGTACATCTCATTATATAGAGAATGTCTCTACTCCTTCCATCGATGACTCTACTCCTCATATTGACGACTTTGCTCTTAACGTTGACAATCCTACTTCTATTGAAATCACTGCTCCGCCTCATTCTTCTGCTCCTCTAGAGGAATTTCCTACTCAAACAGAAGGGGTTTTGCTCCGACTGGCTCTTCCGTGCCTCCGCCTCCTAAGCCTCCTCGACGTCCCCCTTTCATTGGACAAAAAGTTATCACTATTAAGACTGAGTGTAGAAAGTTGCCTTCTAATGTCCTTATTGCTGGTGTTTCATTCTATTCTGAGGATAGTATCCACTAATGAAAGTATGTGGTTCAACACTTCCTTGCTGACGAGGTAAATATTTCTGACCAGCATCATTCTTGCCTGGTTGTTATGGATCTTATTCATCATGCAGGGTTATCTAA

mRNA sequence

ATGAGGGCTCCTATTGCATTTCCTCGCCGCCCTCCTTATGGTTCCTCTGATTCCACTAAGAAGGTCTTTGCTACCTCTGTTAGAGTTTTTACTTCAAATGTTGATGAGTTTGTTCTTGGTAGTACATCTCATTATATAGAGAATGTCTCTACTCCTTCCATCGATGACTCTACTCCTCATATTGACGACTTTGCTCTTAACGTTGACAATCCTACTTCTATTGAAATCACTGCTCCGCCTCATTCTTCTGCTCCTCTAGAGGAATTTCCTACTCAAACAGAAGGGGTTTTGCTCCGACTGGCTCTTCCGTGCCTCCGCCTCCTAAGCCTCCTCGACGTCCCCCTTTCATTGGACAAAAAGTTATCACTATTAAGACTGAGTGTAGAAAGTTGCCTTCTAATGTCCTTATTGCTGGTGTTTCATTCTATTCTGAGGATAGTATCCACTAATGAAAGTATGTGGTTCAACACTTCCTTGCTGACGAGGGTTATCTAA

Coding sequence (CDS)

ATGAGGGCTCCTATTGCATTTCCTCGCCGCCCTCCTTATGGTTCCTCTGATTCCACTAAGAAGGTCTTTGCTACCTCTGTTAGAGTTTTTACTTCAAATGTTGATGAGTTTGTTCTTGGTAGTACATCTCATTATATAGAGAATGTCTCTACTCCTTCCATCGATGACTCTACTCCTCATATTGACGACTTTGCTCTTAACGTTGACAATCCTACTTCTATTGAAATCACTGCTCCGCCTCATTCTTCTGCTCCTCTAGAGGAATTTCCTACTCAAACAGAAGGGGTTTTGCTCCGACTGGCTCTTCCGTGCCTCCGCCTCCTAAGCCTCCTCGACGTCCCCCTTTCATTGGACAAAAAGTTATCACTATTAAGACTGAGTGTAGAAAGTTGCCTTCTAATGTCCTTATTGCTGGTGTTTCATTCTATTCTGAGGATAGTATCCACTAATGAAAGTATGTGGTTCAACACTTCCTTGCTGACGAGGGTTATCTAA

Protein sequence

MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHIDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTRVI
Homology
[Close]
BLAST of IVF0005078 vs. ExPASy TrEMBL
Match: A0A5D3DV34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00340 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60
           MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH
Sbjct: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60

Query: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120
           IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK
Sbjct: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120

Query: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 163
           LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR
Sbjct: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 162

[Close]
BLAST of IVF0005078 vs. ExPASy TrEMBL
Match: A0A1S3BN68 (uncharacterized protein LOC103491899 OS=Cucumis melo OX=3656 GN=LOC103491899 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.3e-79
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60
           MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH
Sbjct: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60

Query: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120
           IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK
Sbjct: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120

Query: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT 162
           LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT
Sbjct: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT 161

[Close]
BLAST of IVF0005078 vs. ExPASy TrEMBL
Match: A0A5A7TPZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001950 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.0e-78
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 3   APIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHID 62
           APIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHID
Sbjct: 43  APIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHID 102

Query: 63  DFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLS 122
           DFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLS
Sbjct: 103 DFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLS 162

Query: 123 LLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 163
           LLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR
Sbjct: 163 LLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 202

[Close]
BLAST of IVF0005078 vs. ExPASy TrEMBL
Match: A0A5A7V5C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00230 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.0e-06
Identity = 39/80 (48.75%), Postives = 49/80 (61.25%), Query Frame = 0 

Query: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH- 61
           R P+A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP  
Sbjct: 60  RTPVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYALSIDDSTPSV 119

Query: 62  -IDDFALNVDNPTSIEITAP 80
            ID  A  + + T ++  AP
Sbjct: 120 TIDTTAPGILDSTLMDNFAP 139

[Close]
BLAST of IVF0005078 vs. NCBI nr
Match: XP_008450238.1 (PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo])

HSP 1 Score: 301 bits (772), Expect = 5.13e-102
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60
           MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH
Sbjct: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60

Query: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120
           IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK
Sbjct: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120

Query: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT 161
           LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT
Sbjct: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLT 161

[Close]
BLAST of IVF0005078 vs. NCBI nr
Match: TYK27358.1 (uncharacterized protein E5676_scaffold325G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 303 bits (777), Expect = 8.71e-102
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60
           MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH
Sbjct: 1   MRAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH 60

Query: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120
           IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK
Sbjct: 61  IDDFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKK 120

Query: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 162
           LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR
Sbjct: 121 LSLLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 162

[Close]
BLAST of IVF0005078 vs. NCBI nr
Match: KAA0045194.1 (uncharacterized protein E6C27_scaffold30G001950 [Cucumis melo var. makuwa])

HSP 1 Score: 299 bits (766), Expect = 2.43e-99
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 3   APIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHID 62
           APIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHID
Sbjct: 43  APIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHID 102

Query: 63  DFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLS 122
           DFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLS
Sbjct: 103 DFALNVDNPTSIEITAPPHSSAPLEEFPTQTEGVLLRLALPCLRLLSLLDVPLSLDKKLS 162

Query: 123 LLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 162
           LLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR
Sbjct: 163 LLRLSVESCLLMSLLLVFHSILRIVSTNESMWFNTSLLTR 202

[Close]
BLAST of IVF0005078 vs. NCBI nr
Match: KAA0062818.1 (uncharacterized protein E6C27_scaffold357G00390 [Cucumis melo var. makuwa] >TYJ96734.1 uncharacterized protein E5676_scaffold986G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 9.87e-09
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPHI 61
           R P+A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP +
Sbjct: 60  RTPVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYALSIDDSTPSV 119

The following BLAST results are available for this feature:
BLAST of IVF0005078 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0005078 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DV341.1e-79100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BN685.3e-79100.00uncharacterized protein LOC103491899 OS=Cucumis melo OX=3656 GN=LOC103491899 PE=... [more]
A0A5A7TPZ12.0e-78100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V5C26.0e-0648.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0005078 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450238.15.13e-102100.00PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo][more]
TYK27358.18.71e-102100.00uncharacterized protein E5676_scaffold325G00340 [Cucumis melo var. makuwa][more]
KAA0045194.12.43e-99100.00uncharacterized protein E6C27_scaffold30G001950 [Cucumis melo var. makuwa][more]
KAA0062818.19.87e-0955.00uncharacterized protein E6C27_scaffold357G00390 [Cucumis melo var. makuwa] >TYJ9... [more]
BLAST of IVF0005078 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005078.1IVF0005078.1mRNA