IVF0005025 (gene) Melon (IVF77) v1

Overview
NameIVF0005025
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Locationchr03: 2708452 .. 2709287 (-)
RNA-Seq ExpressionIVF0005025
SyntenyIVF0005025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAATAACTTTATGTCCAACAACCTCCTGATAGACCCACCTCTCACAAACAACAAATTCACCTGGTCCAATATAAGAAATCCTCTTATGTTCTCCCGCATTGATAGATTTCTCTACAATACAAGTTGGGAGGATTCGTTCAAGCCCCATACCACCAAAACTACTTCAGATCACTTCCCTTTGATATGCGAAGACTCTACCCTTAGCTGGGGTCCTGCTCCGTTCAGGCTAAATAAAATTGTCTTAAATGACCTAGAATTCAAACGAAATATGGAAAGATGGTGGACAGACTCCAATCAAAGTGGCCACCCCGGGTTTTCCTTCATCCAAAAGCTGAAGTCTCTTGCTAATTTTATCAAGCCTTGGCAAAATGAAAAGCTTCACTCCCTCAAATCAACCAAAGAAGATTTAATTAAAGAAGTGGATAGCATTGACAAGAAGGAAATAGACTCTTTCCTAACACAGGAGGAGAGTAACCGTAGACTTTCTCTGAAAAATGATCTCAGTCAATTATCCCTAAAAAAATCTCAATTCTGGTATCAAAGAGCAAAAAAGCTCTGACTCAAGGAGGGAGATGAAAACTCTCATTCCATAGAATTTGCTCGACTAGACAGAAAAGAAATTTCATCCACAAAATTTTAGATGAAGATGGCTCAGCTCAGAACACAAATAACAACATCTCAAGCACCTTCAATAAGTTCTTTTCTTCCATATACAAAGGCAACAATAAAATGGAGAATTTCTTCCTAGACAATCTTGATTGGTACCCCATTGACTTCGCAGATTGGCCCCATCTTTGTACCCCTTCAAAGAAGAAGAGATTAAAGATGTGA

mRNA sequence

ATGTTGAATAACTTTATGTCCAACAACCTCCTGATAGACCCACCTCTCACAAACAACAAATTCACCTGGTCCAATATAAGAAATCCTCTTATGTTCTCCCGCATTGATAGATTTCTCTACAATACAAGTTGGGAGGATTCGTTCAAGCCCCATACCACCAAAACTACTTCAGATCACTTCCCTTTGATATGCGAAGACTCTACCCTTAGCTGGGGTCCTGCTCCGTTCAGGCTAAATAAAATTGTCTTAAATGACCTAGAATTCAAACGAAATATGGAAAGATGGTGGACAGACTCCAATCAAAGTGGCCACCCCGGGTTTTCCTTCATCCAAAAGCTGAAGTCTCTTGCTAATTTTATCAAGCCTTGGCAAAATGAAAAGCTTCACTCCCTCAAATCAACCAAAGAAGATTTAATTAAAGAAGTGGATAGCATTGACAAGAAGGAAATAGACTCTTTCCTAACACAGGAGGAGAGTAACCGTAGACTTTCTCTGAAAAATGATCTCAATGAAGATGGCTCAGCTCAGAACACAAATAACAACATCTCAAGCACCTTCAATAAGTTCTTTTCTTCCATATACAAAGGCAACAATAAAATGGAGAATTTCTTCCTAGACAATCTTGATTGGTACCCCATTGACTTCGCAGATTGGCCCCATCTTTGTACCCCTTCAAAGAAGAAGAGATTAAAGATGTGA

Coding sequence (CDS)

ATGTTGAATAACTTTATGTCCAACAACCTCCTGATAGACCCACCTCTCACAAACAACAAATTCACCTGGTCCAATATAAGAAATCCTCTTATGTTCTCCCGCATTGATAGATTTCTCTACAATACAAGTTGGGAGGATTCGTTCAAGCCCCATACCACCAAAACTACTTCAGATCACTTCCCTTTGATATGCGAAGACTCTACCCTTAGCTGGGGTCCTGCTCCGTTCAGGCTAAATAAAATTGTCTTAAATGACCTAGAATTCAAACGAAATATGGAAAGATGGTGGACAGACTCCAATCAAAGTGGCCACCCCGGGTTTTCCTTCATCCAAAAGCTGAAGTCTCTTGCTAATTTTATCAAGCCTTGGCAAAATGAAAAGCTTCACTCCCTCAAATCAACCAAAGAAGATTTAATTAAAGAAGTGGATAGCATTGACAAGAAGGAAATAGACTCTTTCCTAACACAGGAGGAGAGTAACCGTAGACTTTCTCTGAAAAATGATCTCAATGAAGATGGCTCAGCTCAGAACACAAATAACAACATCTCAAGCACCTTCAATAAGTTCTTTTCTTCCATATACAAAGGCAACAATAAAATGGAGAATTTCTTCCTAGACAATCTTGATTGGTACCCCATTGACTTCGCAGATTGGCCCCATCTTTGTACCCCTTCAAAGAAGAAGAGATTAAAGATGTGA

Protein sequence

MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHFPLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNNNISSTFNKFFSSIYKGNNKMENFFLDNLDWYPIDFADWPHLCTPSKKKRLKM
Homology
BLAST of IVF0005025 vs. ExPASy TrEMBL
Match: A0A5A7TF44 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001880 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.0e-104
Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHF 60
           MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHF
Sbjct: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHF 60

Query: 61  PLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFI 120
           PLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFI
Sbjct: 61  PLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFI 120

Query: 121 KPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNN 180
           KPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNN
Sbjct: 121 KPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNN 180

Query: 181 NISSTFNKFFSSIY 195
           NISSTFNK   S+Y
Sbjct: 181 NISSTFNKLAPSLY 194

BLAST of IVF0005025 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.2e-82
Identity = 164/284 (57.75%), Postives = 194/284 (68.31%), Query Frame = 0

Query: 1    MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
            MLNNF+SNNLLIDPPLTNN+FTWSN+RNP  FSRIDRFLYN+SWE+ F PHTT+T    T
Sbjct: 889  MLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFSRIDRFLYNSSWENLFSPHTTRTLPRST 948

Query: 61   SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
            SDHFPL+CEDS   LSWGP PFRLN I L+D EFKRNM RWW +S Q+G+PGFSFIQ+LK
Sbjct: 949  SDHFPLVCEDSNPKLSWGPIPFRLNSITLSDPEFKRNMGRWWENSIQAGYPGFSFIQRLK 1008

Query: 121  SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDL----- 180
            SLANFIKPWQ EKLHSL   KE +I+EVDSIDKKE+D+ LTQEESNRRL+LK DL     
Sbjct: 1009 SLANFIKPWQKEKLHSLTYAKEAIIREVDSIDKKELDTPLTQEESNRRLALKADLSELSL 1068

Query: 181  ------------------------------------------NEDGSAQNTNNNISSTFN 232
                                                      +E+GS QNTNN+IS+ F 
Sbjct: 1069 KESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGSIQNTNNSISTAFI 1128

BLAST of IVF0005025 vs. ExPASy TrEMBL
Match: A0A5D3BUZ3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00050 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.2e-82
Identity = 161/284 (56.69%), Postives = 192/284 (67.61%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
           MLNNF++NNLLIDPPL NN+FTWSN+RNP  FSRIDRFLYN++WE+ F PHTT+T    T
Sbjct: 1   MLNNFITNNLLIDPPLINNRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRST 60

Query: 61  SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
           SDHFPL+CEDS   LSWGP PFRLN I L+D EFKRNM RWW +S Q GHPGFSFIQ+LK
Sbjct: 61  SDHFPLVCEDSNPKLSWGPVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLK 120

Query: 121 SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDL----- 180
           SLANFI PWQ EKLHSL   K+++I+EVDSIDKKE+D+ LTQEESNRRL+LK DL     
Sbjct: 121 SLANFINPWQKEKLHSLTYAKDNIIREVDSIDKKELDTPLTQEESNRRLALKADLSELSL 180

Query: 181 ------------------------------------------NEDGSAQNTNNNISSTFN 232
                                                     +E+G  QNTNN IS+ F 
Sbjct: 181 KESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNNGISTAFI 240

BLAST of IVF0005025 vs. ExPASy TrEMBL
Match: A0A5A7UV84 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001710 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 153/237 (64.56%), Postives = 186/237 (78.48%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
           MLNNF+SNNLLIDPPLTNN+FTWSN+RNP  FSRIDRFLYN+SWE+ F PHTT+T    T
Sbjct: 633 MLNNFISNNLLIDPPLTNNRFTWSNLRNPSTFSRIDRFLYNSSWENLFSPHTTRTLPRPT 692

Query: 61  SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
           SDHFPL+CEDS   L WGPAPFRLN I LND EFKRNMERWW +S Q+GHPGFSFIQ+LK
Sbjct: 693 SDHFPLVCEDSNPKLRWGPAPFRLNSIALNDPEFKRNMERWWENSVQNGHPGFSFIQRLK 752

Query: 121 SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGS 180
           SLAN IKPWQ EKLHSL   KE +I+EVDSIDKKE+D+ L+Q+ESNRRL+LK +L++   
Sbjct: 753 SLANHIKPWQKEKLHSLNYAKETIIREVDSIDKKELDTPLSQKESNRRLALKAELSD--- 812

Query: 181 AQNTNNNISSTFNKFFSSIYKGNNKMENFFLDNLDWYPIDFADWPHLCTPSKKKRLK 232
                  +S   ++F   IYK + K +  F++NLDW PI+F++WPHLC P  ++ +K
Sbjct: 813 -------LSLKESQF--CIYKSSTKSDPLFIENLDWNPIEFSEWPHLCAPFLEEEIK 857

BLAST of IVF0005025 vs. ExPASy TrEMBL
Match: A0A5A7UTS4 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3840G00080 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.0e-80
Identity = 163/284 (57.39%), Postives = 193/284 (67.96%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
           MLNNF+SNNLLIDPPLTNN++TWSN+RN   FSR+DRFL+N+SWE  FKPH T+T    T
Sbjct: 17  MLNNFISNNLLIDPPLTNNRYTWSNLRNSPTFSRLDRFLFNSSWEILFKPHITRTLPRPT 76

Query: 61  SDHFPLICED--STLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
           SDHFPL+CED  STL WGPAPFRLN I LND EFKRNMERWW  S Q+GHP FSFIQ+LK
Sbjct: 77  SDHFPLVCEDSTSTLRWGPAPFRLNSIALNDPEFKRNMERWWELSVQNGHPRFSFIQRLK 136

Query: 121 SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDL----- 180
           SLAN IKPWQ EK HSL S KE++I+EVDSIDKKE+D+ L+QEESNRRL+LK +L     
Sbjct: 137 SLANLIKPWQKEKFHSLISAKENIIREVDSIDKKELDTPLSQEESNRRLALKAELSDLSL 196

Query: 181 ------------------------------------------NEDGSAQNTNNNISSTFN 232
                                                     +E+GS QNTNNNIS  F 
Sbjct: 197 KESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFV 256

BLAST of IVF0005025 vs. NCBI nr
Match: KAA0041528.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24401.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (989), Expect = 8.10e-132
Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHF 60
           MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHF
Sbjct: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKTTSDHF 60

Query: 61  PLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFI 120
           PLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFI
Sbjct: 61  PLICEDSTLSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLKSLANFI 120

Query: 121 KPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNN 180
           KPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNN
Sbjct: 121 KPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNEDGSAQNTNN 180

Query: 181 NISSTFNKFFSSIY 194
           NISSTFNK   S+Y
Sbjct: 181 NISSTFNKLAPSLY 194

BLAST of IVF0005025 vs. NCBI nr
Match: KAA0037445.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK01919.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 310 bits (795), Expect = 8.23e-97
Identity = 161/284 (56.69%), Postives = 192/284 (67.61%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
           MLNNF++NNLLIDPPL NN+FTWSN+RNP  FSRIDRFLYN++WE+ F PHTT+T    T
Sbjct: 1   MLNNFITNNLLIDPPLINNRFTWSNLRNPPTFSRIDRFLYNSTWENLFSPHTTRTLPRST 60

Query: 61  SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
           SDHFPL+CEDS   LSWGP PFRLN I L+D EFKRNM RWW +S Q GHPGFSFIQ+LK
Sbjct: 61  SDHFPLVCEDSNPKLSWGPVPFRLNSIALSDPEFKRNMGRWWENSIQDGHPGFSFIQRLK 120

Query: 121 SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNE--- 180
           SLANFI PWQ EKLHSL   K+++I+EVDSIDKKE+D+ LTQEESNRRL+LK DL+E   
Sbjct: 121 SLANFINPWQKEKLHSLTYAKDNIIREVDSIDKKELDTPLTQEESNRRLALKADLSELSL 180

Query: 181 --------------------------------------------DGSAQNTNNNISSTFN 231
                                                       +G  QNTNN IS+ F 
Sbjct: 181 KESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNNGISTAFI 240

BLAST of IVF0005025 vs. NCBI nr
Match: KAA0058104.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 301 bits (772), Expect = 9.19e-95
Identity = 160/284 (56.34%), Postives = 191/284 (67.25%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
           MLNNF+SNNLLIDPPLTNN++TWSN+RNP  FS +DRFLYN+SWE  F PH T+T    T
Sbjct: 17  MLNNFISNNLLIDPPLTNNRYTWSNLRNPPTFSHLDRFLYNSSWEILFNPHITRTLPRTT 76

Query: 61  SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
           SDHFPL+CEDST  L WGPAPFRLN I LND EFKRNMERWW  S Q+GHPGFSFIQ+LK
Sbjct: 77  SDHFPLVCEDSTSTLRWGPAPFRLNSITLNDPEFKRNMERWWELSIQNGHPGFSFIQRLK 136

Query: 121 SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLK---NDL-- 180
           SLAN IKPWQ EK HSL + KE++I+EVD+IDK E+D+ L+QEESNRRL+LK   NDL  
Sbjct: 137 SLANLIKPWQKEKFHSLTTAKENIIREVDAIDKNELDTPLSQEESNRRLALKAELNDLSL 196

Query: 181 ------------------------------------------NEDGSAQNTNNNISSTFN 231
                                                     NE+GS QNTNNNIS  F 
Sbjct: 197 KESQFWFQRAKKLWIKEGDENYAFFHRICSSRQKRNLIHEIQNEEGSIQNTNNNISLAFV 256

BLAST of IVF0005025 vs. NCBI nr
Match: KAA0058554.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK01631.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 306 bits (783), Expect = 6.83e-94
Identity = 163/284 (57.39%), Postives = 193/284 (67.96%), Query Frame = 0

Query: 1   MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
           MLNNF+SNNLLIDPPLTNN++TWSN+RN   FSR+DRFL+N+SWE  FKPH T+T    T
Sbjct: 17  MLNNFISNNLLIDPPLTNNRYTWSNLRNSPTFSRLDRFLFNSSWEILFKPHITRTLPRPT 76

Query: 61  SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
           SDHFPL+CEDST  L WGPAPFRLN I LND EFKRNMERWW  S Q+GHP FSFIQ+LK
Sbjct: 77  SDHFPLVCEDSTSTLRWGPAPFRLNSIALNDPEFKRNMERWWELSVQNGHPRFSFIQRLK 136

Query: 121 SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLN---- 180
           SLAN IKPWQ EK HSL S KE++I+EVDSIDKKE+D+ L+QEESNRRL+LK +L+    
Sbjct: 137 SLANLIKPWQKEKFHSLISAKENIIREVDSIDKKELDTPLSQEESNRRLALKAELSDLSL 196

Query: 181 -------------------------------------------EDGSAQNTNNNISSTFN 231
                                                      E+GS QNTNNNIS  F 
Sbjct: 197 KESQFWFQRAKKLWLKEGDENSAFFHRICSSRQKRNLIHEIQDEEGSIQNTNNNISLAFV 256

BLAST of IVF0005025 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (796), Expect = 1.83e-93
Identity = 164/284 (57.75%), Postives = 194/284 (68.31%), Query Frame = 0

Query: 1    MLNNFMSNNLLIDPPLTNNKFTWSNIRNPLMFSRIDRFLYNTSWEDSFKPHTTKT----T 60
            MLNNF+SNNLLIDPPLTNN+FTWSN+RNP  FSRIDRFLYN+SWE+ F PHTT+T    T
Sbjct: 889  MLNNFISNNLLIDPPLTNNRFTWSNLRNPPTFSRIDRFLYNSSWENLFSPHTTRTLPRST 948

Query: 61   SDHFPLICEDST--LSWGPAPFRLNKIVLNDLEFKRNMERWWTDSNQSGHPGFSFIQKLK 120
            SDHFPL+CEDS   LSWGP PFRLN I L+D EFKRNM RWW +S Q+G+PGFSFIQ+LK
Sbjct: 949  SDHFPLVCEDSNPKLSWGPIPFRLNSITLSDPEFKRNMGRWWENSIQAGYPGFSFIQRLK 1008

Query: 121  SLANFIKPWQNEKLHSLKSTKEDLIKEVDSIDKKEIDSFLTQEESNRRLSLKNDLNE--- 180
            SLANFIKPWQ EKLHSL   KE +I+EVDSIDKKE+D+ LTQEESNRRL+LK DL+E   
Sbjct: 1009 SLANFIKPWQKEKLHSLTYAKEAIIREVDSIDKKELDTPLTQEESNRRLALKADLSELSL 1068

Query: 181  --------------------------------------------DGSAQNTNNNISSTFN 231
                                                        +GS QNTNN+IS+ F 
Sbjct: 1069 KESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGSIQNTNNSISTAFI 1128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TF443.0e-10497.94LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BLV73.2e-8257.75LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5D3BUZ34.2e-8256.69LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
A0A5A7UV842.7e-8164.56Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7UTS41.0e-8057.39LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... [more]
Match NameE-valueIdentityDescription
KAA0041528.18.10e-13297.94LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK244... [more]
KAA0037445.18.23e-9756.69LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK019... [more]
KAA0058104.19.19e-9556.34LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
KAA0058554.16.83e-9457.39LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK016... [more]
TYJ99315.11.83e-9357.75LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148
NoneNo IPR availablePANTHERPTHR33710:SF28SUBFAMILY NOT NAMEDcoord: 3..163
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 3..163
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..65
e-value: 7.3E-7
score: 31.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 2..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0005025.1IVF0005025.1mRNA