IVF0004864 (gene) Melon (IVF77) v1

Overview


Name	IVF0004864
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTERF5
Location	chr10: 4370647 .. 4371767 (-)
RNA-Seq Expression	IVF0004864
Synteny	IVF0004864

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAACTTTCCTCCTCTTTTCTTCTACATTTCTTCCAAAATCGTTTTCTCAACACCGTTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCATCCAATTCCTCACCAATTCATGTGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAACACATCCAGCAGTACGGAGCCGTTATCGATTTCTTGAAATCACATGGATTCGAGAATACACAGATTGCCAAATTGGTCCCGAGGGAACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTTGTCGGACCTTTACTTCCTAAGTTAATTATATCATCCCCATGGGTTCTTCGCAGCAGCTTAGATTCTCATTTGAAACCATCAATTTTTTTCCTAAGGGAAATTCTTGAATCGGATGAAAAAGTAATTGCTACTGTTTGTCGTTTTCCAAGGCTTCTAACTTTTTATCTTAAGGGTATTTTAAAATCTAACGTTGATGTTTTGGTCAGTGAAGGAATGCCTTCTAGGAATATAGCCAAAATGATTGCAATGCAGCCTCTTACTATTATGCTAAAGGTTGATAGAATGATTAATACAGTGAAAACGGTTAAAGAATTAGGAATTGAACCAAAGGCTGGTATGTTTGTTTATGCAGTTATAGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCCGAGAAGGAGATTTTACAGCATTTAAGAGATATCCAAATTATTTAACTTGTACAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAGCTCTAATTTCTTACCCTAAGTTATTCAAGTTGTCATTGGACAAGCGGGTCCAACCGAGATACAAAGTTCTTGAGGTCTTGAAGGTGAAAAGTCTTCTTAGGAACGTAAAGATCGCTCGGGTGCTTGCACAAGGGGAGAGAGAATTTGTGAAGACATATGTTGTTAAGTATTTGGATAAAATCCCAAATCTGATGGACATATACCGGGGCAATATCGCAGCCGAAACCAAATCTGTTCCGTAG

mRNA sequence

ATGTCCAAACTTTCCTCCTCTTTTCTTCTACATTTCTTCCAAAATCGTTTTCTCAACACCGTTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCATCCAATTCCTCACCAATTCATGTGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAACACATCCAGCAGTACGGAGCCGTTATCGATTTCTTGAAATCACATGGATTCGAGAATACACAGATTGCCAAATTGGTCCCGAGGGAACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTTGTCGGACCTTTACTTCCTAAGTTAATTATATCATCCCCATGGGTTCTTCGCAGCAGCTTAGATTCTCATTTGAAACCATCAATTTTTTTCCTAAGGGAAATTCTTGAATCGGATGAAAAAGTAATTGCTACTGTTTGTCGTTTTCCAAGGCTTCTAACTTTTTATCTTAAGGGTATTTTAAAATCTAACGTTGATGTTTTGGTCAGTGAAGGAATGCCTTCTAGGAATATAGCCAAAATGATTGCAATGCAGCCTCTTACTATTATGCTAAAGGTTGATAGAATGATTAATACAGTGAAAACGGTTAAAGAATTAGGAATTGAACCAAAGGCTGGTATGTTTGTTTATGCAGTTATAGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGACATTTAAGAGATATCCAAATTATTTAACTTGTACAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAGCTCTAATTTCTTACCCTAAGTTATTCAAGTTGTCATTGGACAAGCGGGTCCAACCGAGATACAAAGTTCTTGAGGTCTTGAAGGTGAAAAGTCTTCTTAGGAACGTAAAGATCGCTCGGGTGCTTGCACAAGGGGAGAGAGAATTTGTGAAGACATATGTTGTTAAGTATTTGGATAAAATCCCAAATCTGATGGACATATACCGGGGCAATATCGCAGCCGAAACCAAATCTGTTCCGTAG

Coding sequence (CDS)

ATGTCCAAACTTTCCTCCTCTTTTCTTCTACATTTCTTCCAAAATCGTTTTCTCAACACCGTTTCTACTTCTACATTGCCTTTGCCCTCTGTTTCTACCATCCAATTCCTCACCAATTCATGTGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAACACATCCAGCAGTACGGAGCCGTTATCGATTTCTTGAAATCACATGGATTCGAGAATACACAGATTGCCAAATTGGTCCCGAGGGAACCTTCGATCCTTCAATCCAAAGTATCCAACAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTTGTCGGACCTTTACTTCCTAAGTTAATTATATCATCCCCATGGGTTCTTCGCAGCAGCTTAGATTCTCATTTGAAACCATCAATTTTTTTCCTAAGGGAAATTCTTGAATCGGATGAAAAAGTAATTGCTACTGTTTGTCGTTTTCCAAGGCTTCTAACTTTTTATCTTAAGGGTATTTTAAAATCTAACGTTGATGTTTTGGTCAGTGAAGGAATGCCTTCTAGGAATATAGCCAAAATGATTGCAATGCAGCCTCTTACTATTATGCTAAAGGTTGATAGAATGATTAATACAGTGAAAACGGTTAAAGAATTAGGAATTGAACCAAAGGCTGGTATGTTTGTTTATGCAGTTATAGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGACATTTAAGAGATATCCAAATTATTTAACTTGTACAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAGCTCTAATTTCTTACCCTAAGTTATTCAAGTTGTCATTGGACAAGCGGGTCCAACCGAGATACAAAGTTCTTGAGGTCTTGAAGGTGAAAAGTCTTCTTAGGAACGTAAAGATCGCTCGGGTGCTTGCACAAGGGGAGAGAGAATTTGTGAAGACATATGTTGTTAAGTATTTGGATAAAATCCCAAATCTGATGGACATATACCGGGGCAATATCGCAGCCGAAACCAAATCTGTTCCGTAG

Protein sequence

MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEKHIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDSTWKKKINVMKTFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPKLFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKSVP

Homology

[Close]

BLAST of IVF0004864 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-10
Identity = 69/293 (23.55%), Postives = 133/293 (45.39%), Query Frame = 0


Query: 68  VIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPW 127
           V++FL   G   + I  ++ + P I    +++NLKP   FL+ +G       K+I   P 
Sbjct: 235 VVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPA 294

Query: 128 VLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPS 187
           +L  S    L  ++ FL +   ++E++   + R P ++++ ++  L+  ++   S  +  
Sbjct: 295 ILTYSRQK-LTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNV-- 354

Query: 188 RNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDSTWKKKIN 247
            ++A ++   P T  L ++   + +K V E  +E   G+    +++    +  T+  K N
Sbjct: 355 -DVAVLLHRCPQTFGLSIE---SNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKEN 414

Query: 248 VMKTFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPKLFKLSLDKRVQPRYKVLE 307
           VM  +                  D+ F T       L+ +P+ F  SL +R++PRY++++
Sbjct: 415 VMPKW------------------DY-FQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQ 474

Query: 308 VLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGNIAAETKS 361
              V+ LL      +VL+    EF K  VVK       +M +   N+ AE  S
Sbjct: 475 RSGVRLLLN-----QVLSLSGIEFEK--VVK-----KKMMKLVSNNVIAEQSS 489

[Close]

BLAST of IVF0004864 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.0e-10
Identity = 53/260 (20.38%), Postives = 123/260 (47.31%), Query Frame = 0


Query: 68  VIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPW 127
           ++D+L + G + +   ++  R    LQ  V  + + + ++L  +G     + ++++  P 
Sbjct: 187 LLDYLSTFGLKESHFVQMYERHMPSLQINVF-SAQERLDYLLSVGVKHRDIKRMLLRQPQ 246

Query: 128 VLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSE-GMP 187
           +L+ +++++LK  I FL  +   + K+   V   P L ++ ++  L+  +  L+ E G+ 
Sbjct: 247 ILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIK 306

Query: 188 SRNIAKMIAMQPLTIMLKVDRMINT--VKTVKELG---------IEPKAGMFVYAV---- 247
             ++ K++ + P  ++ ++D   NT  +   KELG         ++    +  Y++    
Sbjct: 307 ETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGF 366

Query: 248 IVRLSMSDSTWKKKINVMKTFKRYPNYLTCT-EEKMRDVADFCFNTAKLDPGALISYPKL 307
           + R++   S      +++K        L+ + E+ ++    +  N    +   L  YP  
Sbjct: 367 LPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMY 426

Query: 308 FKLSLDKRVQPRYKVLEVLK 311
             LSLD+R++PR++ L  LK
Sbjct: 427 LSLSLDQRIRPRHRFLVELK 445

[Close]

BLAST of IVF0004864 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-07
Identity = 36/140 (25.71%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 68  VIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGF-VGPLLPKLIISSP 127
           ++ F ++ G   TQ+ K++   P ++   +   L     FL  +G     ++ K+++ +P
Sbjct: 117 LLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNP 176

Query: 128 WVLRSSLDSHLKPSIFFLREILE-SDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSEGM 187
           +++  S+D  L+P+  FL+  +  S++ + + V  FP+LL   +  ILK N D L   G 
Sbjct: 177 FLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGF 236

Query: 188 PSRNIAKMIAMQPLTIMLKV 206
               IA M+   P  ++  V
Sbjct: 237 GDSQIATMVTGYPQILIKSV 256

[Close]

BLAST of IVF0004864 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 40/154 (25.97%), Postives = 76/154 (49.35%), Query Frame = 0


Query: 69  IDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPWV 128
           ++FL S    N  +A      P  L   V  N+ P  ++L ++G     LP L+   P V
Sbjct: 116 VEFLHSLDLSNEDLAAY----PLALGCSVRKNMVPVLDYLGKLGVRQDALPDLLRRYPQV 175

Query: 129 LRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPSR 188
           L +S+   L P + +L+ +      V   + R+P LL F L+G + +++  LV  G+  R
Sbjct: 176 LHASVVVDLAPVVKYLQGMDVRPHDVPRVLERYPELLGFKLEGTMSTSIAYLVGIGVARR 235

Query: 189 NIAKMIAMQPLTIMLKVDRMINT-VKTVKELGIE 222
            +  +I   P  + ++V ++I   V+ ++ +G++
Sbjct: 236 QVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQ 265

[Close]

BLAST of IVF0004864 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.1e-06
Identity = 41/153 (26.80%), Postives = 75/153 (49.02%), Query Frame = 0


Query: 70  DFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPWVL 129
           +FL S G     +A      P  L   V  N+ P  ++L ++G     LP L+   P VL
Sbjct: 108 EFLGSLGLTQEDLAAY----PLALGCSVRKNMVPVLDYLGKLGVRRDALPDLLRRYPQVL 167

Query: 130 RSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPSRN 189
            +S+   L P + +L+ +      V   + R+P LL F L+G + ++V  LV  G+  R 
Sbjct: 168 HASVVVDLAPVVKYLQGMDVRPTDVPRVLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQ 227

Query: 190 IAKMIAMQPLTIMLKVDRMINT-VKTVKELGIE 222
           +  +I   P  + ++V ++I   V+ ++ +G++
Sbjct: 228 VGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQ 256

[Close]

BLAST of IVF0004864 vs. ExPASy TrEMBL
Match: A0A5D3CZB3 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002900 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 6.8e-196
Identity = 361/373 (96.78%), Postives = 362/373 (97.05%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL
Sbjct: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS
Sbjct: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
           TWKKKINVMK+           FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNIAAETKSVP 363
           YRGNIAAETKSVP
Sbjct: 361 YRGNIAAETKSVP 373

[Close]

BLAST of IVF0004864 vs. ExPASy TrEMBL
Match: A0A1S3BGD1 (transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103489539 PE=3 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 6.8e-196
Identity = 361/373 (96.78%), Postives = 362/373 (97.05%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL
Sbjct: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS
Sbjct: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
           TWKKKINVMK+           FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNIAAETKSVP 363
           YRGNIAAETKSVP
Sbjct: 361 YRGNIAAETKSVP 373

[Close]

BLAST of IVF0004864 vs. ExPASy TrEMBL
Match: A0A5D3CX09 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002920 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.2e-160
Identity = 301/372 (80.91%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSK+SSSFLLHFF NRFLNT+ TSTLPL SVSTIQFLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           + QQYGAVIDFLKSHGFEN+QIAKLV R+PSILQS+VS NLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+SSP +L  SLDS LKPS   L+E+L SDE+V A +CR   LLT+  KG++KSN DVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNIAKMIA  P TIM +VD+MI  VK VKELGIEPKAGMFV+A+ VR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
            WK+KINVMK+           FKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP 
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNIAAETKSV 362
           YRGNIAAETKSV
Sbjct: 361 YRGNIAAETKSV 372

[Close]

BLAST of IVF0004864 vs. ExPASy TrEMBL
Match: A0A5A7SXE1 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G001220 PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 2.1e-160
Identity = 301/372 (80.91%), Postives = 324/372 (87.10%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSK+SSSFLLHFF NRFLNT+ TSTLPL SVSTIQFLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           + QQYGAVIDFLKSHGFEN QIAKLV R+PSILQS+VS NLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+SSP +L  SLDS LKPS   L+E+L SDE+V A +CR   LLT+  KG++KSN DVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNIAKMIA  P TIM +VD+MI  VK VKELGIEPKAGMFV+A+ VR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
            WK+KINVMK+           FKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP 
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNIAAETKSV 362
           YRGNIAAETKSV
Sbjct: 361 YRGNIAAETKSV 372

[Close]

BLAST of IVF0004864 vs. ExPASy TrEMBL
Match: A0A5D3CXX8 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003080 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.4e-156
Identity = 293/372 (78.76%), Postives = 323/372 (86.83%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKLSSSFLLHF QNRFLNTVST+TLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           HIQQYGA+IDFLKS GFENTQIAKLV R PSILQSKVSNNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+S P +L  SLDS LKPS FFL+EILESDE+V   + R+P LL   LKG LK ++DVL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNI++MI++QP  IM KVDR+I  VKTVKELGIEPKA  FVYAV+VRLSMSDS
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
           TWKKKINVMK+           FKR+PNYL C+EEK+RDVADFCFNTAKLDPG LISYPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKR++PRYKVLEVLKVK+LL+N KIA VL +GER FV+ YVVK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNIAAETKSV 362
           Y GN+ AETKSV
Sbjct: 361 YVGNVEAETKSV 372

[Close]

BLAST of IVF0004864 vs. NCBI nr
Match: XP_008446995.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis melo] >KAA0034133.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15786.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 687 bits (1774), Expect = 1.02e-248
Identity = 361/373 (96.78%), Postives = 362/373 (97.05%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL
Sbjct: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS
Sbjct: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
           TWKKKINVMK+           FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

Query: 361 YRGNIAAETKSVP 362
           YRGNIAAETKSVP
Sbjct: 361 YRGNIAAETKSVP 373

[Close]

BLAST of IVF0004864 vs. NCBI nr
Match: TYK15788.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 570 bits (1470), Expect = 2.06e-202
Identity = 301/372 (80.91%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSK+SSSFLLHFF NRFLNT+ TSTLPL SVSTIQFLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           + QQYGAVIDFLKSHGFEN+QIAKLV R+PSILQS+VS NLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+SSP +L  SLDS LKPS   L+E+L SDE+V A +CR   LLT+  KG++KSN DVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNIAKMIA  P TIM +VD+MI  VK VKELGIEPKAGMFV+A+ VR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
            WK+KINVMK+           FKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP 
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

[Close]

BLAST of IVF0004864 vs. NCBI nr
Match: KAA0034131.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 570 bits (1468), Expect = 4.15e-202
Identity = 301/372 (80.91%), Postives = 324/372 (87.10%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSK+SSSFLLHFF NRFLNT+ TSTLPL SVSTIQFLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           + QQYGAVIDFLKSHGFEN QIAKLV R+PSILQS+VS NLKPKFEFLQEIGFVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+SSP +L  SLDS LKPS   L+E+L SDE+V A +CR   LLT+  KG++KSN DVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNIAKMIA  P TIM +VD+MI  VK VKELGIEPKAGMFV+A+ VR SMS+S
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFVHALRVRCSMSES 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
            WK+KINVMK+           FKRYPNYLTC+EEKMRDVADFCFNTAKLDPG LISYP 
Sbjct: 241 HWKRKINVMKSLGWSEEEILTAFKRYPNYLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI
Sbjct: 301 LFKLSFDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360

[Close]

BLAST of IVF0004864 vs. NCBI nr
Match: XP_008445933.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis melo] >TYK15804.1 transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 557 bits (1435), Expect = 4.37e-197
Identity = 293/372 (78.76%), Postives = 323/372 (86.83%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSKLSSSFLLHF QNRFLNTVST+TLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           HIQQYGA+IDFLKS GFENTQIAKLV R PSILQSKVSNNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+S P +L  SLDS LKPS FFL+EILESDE+V   + R+P LL   LKG LK ++DVL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNI++MI++QP  IM KVDR+I  VKTVKELGIEPKA  FVYAV+VRLSMSDS
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
           TWKKKINVMK+           FKR+PNYL C+EEK+RDVADFCFNTAKLDPG LISYPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKR++PRYKVLEVLKVK+LL+N KIA VL +GER FV+ YVVK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

[Close]

BLAST of IVF0004864 vs. NCBI nr
Match: KAA0034116.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 556 bits (1433), Expect = 8.82e-197
Identity = 292/372 (78.49%), Postives = 323/372 (86.83%), Query Frame = 0


Query: 1   MSKLSSSFLLHFFQNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MSK+SSSFLLHF QNRFLNTVST+TLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  HIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPK 120
           HIQQYGA+IDFLKS GFENTQIAKLV R PSILQSKVSNNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 LIISSPWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVL 180
           LI+S P +L  SLDS LKPS FFL+EILESDE+V   + R+P LL   LKG LK ++DVL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 VSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSDS 240
           VSEG+PSRNI++MI++QP  IM KVDR+I  VKTVKELGIEPKA  FVYAV+VRLSMSDS
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKKKINVMKT-----------FKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPK 300
           TWKKKINVMK+           FKR+PNYL C+EEK+RDVADFCFNTAKLDPG LISYPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 LFKLSLDKRVQPRYKVLEVLKVKSLLRNVKIARVLAQGEREFVKTYVVKYLDKIPNLMDI 360
           LFKLS DKR++PRYKVLEVLKVK+LL+N KIA VL +GER FV+ YVVK+LD+IPNLMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

[Close]

BLAST of IVF0004864 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 152.9 bits (385), Expect = 4.9e-37
Identity = 104/360 (28.89%), Postives = 176/360 (48.89%), Query Frame = 0


Query: 14  QNRFLNTVSTSTLPLPSVS--------TIQFLTNSCGLSSGSPTSAGRKLQFDEKHIQQY 73
           Q +F + V+T T   P           T+ +L +SCGLS  S T A RKL  D    ++ 
Sbjct: 44  QTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSP--ERP 103

Query: 74  GAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISS 133
             V++ L+ HGF   QI+ LV + P +L +   + L PK  F   IG    LL + + S 
Sbjct: 104 NTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASD 163

Query: 134 PWVLRSSLDSHLKPSIFFLREILESDEKVIATVCRFPRLLTFYLKGILKSNVDVLVSEGM 193
           P +L  SL + L PS  FL+ +L+SDEK++A + R   +        L  N++ +   G+
Sbjct: 164 PTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGV 223

Query: 194 PSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLSMSD-STWKK 253
           P + I  ++   P  +M K        K  +E+G  P+   FV A+       + S W K
Sbjct: 224 PEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDK 283

Query: 254 -----------KINVMKTFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALISYPKLFKL 313
                      + ++M  FK++P+ +  +E K+    ++  N   + P ++   P +   
Sbjct: 284 CFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFF 343

Query: 314 SLDKRVQPRYKVLEVLKVKSLLR-NVKIARVLAQGEREFVKTYVVKYLDKIPNLMDIYRG 353
           SL+KR+ PR  V +VL    L++ +  +  +L   E+ F++  V+KY +++P LM++Y G
Sbjct: 344 SLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of IVF0004864 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 139.4 bits (350), Expect = 5.6e-33
Identity = 90/334 (26.95%), Postives = 160/334 (47.90%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLQFDEKHIQQYGAVIDFLKSHGFENTQIAKLVPREPSI 92
           T+ +L +SCGLS  S  S  R ++      ++  +V+   K HGF N QI  ++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSS--KKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPWVLRSSLDSHLKPSIFFLREILESDE 152
           L     + + PK  F   IGF      K+I SSP +L  SL   L P    L+ IL  +E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 KVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPSRNIAKMIAMQPLTIMLKVDRMINTV 212
            V+  + R  R  +  +   +   V +    G+P ++I  ++   P T   +  R    +
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 KTVKELGIEPKAGMFVYAVIVRLSMSDSTWKKKINVMKTF-----------KRYPNYLTC 272
             V   G +PK   FV+A++     S+S  ++K  + + F            R+PN +T 
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 TEEKMRDVADFCFNTAKLDPGALISYPKLFKLSLDKRVQPRYKVLEVLKVKSLLR--NVK 332
           ++EK+    ++  N   L    +++ P +  LS++KR++PR +V+ +L  K L++  ++ 
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 IARVLAQGEREFVKTYVVKYLDKIPNLMDIYRGN 354
              +L     EF+  +V+KY D++P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of IVF0004864 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-26
Identity = 87/303 (28.71%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 60  KHIQQYGAVIDFLKSHGFENTQIAKLVPREPSILQSKVSNNLKPKFEFLQEIGFVGPLLP 119
           K ++Q  +VI  LKS+ F +TQI K +   P ++   V   L+PK  F ++IGF G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KLIISSPWVLRSSLDSHLKPSIFFLREIL---ESDEKVIATVCRFPRLLTFYLKGILKSN 179
           K +  +  V+  SL   L P++  L+ I+     D  VI + C +  LL+      L  N
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGW-LLLSRDPNLFLLPN 185

Query: 180 VDVLVSEGMPSRNIAKMIAMQPLTIMLKVDRMINTVKTVKELGIEPKAGMFVYAVIVRLS 239
           +  L + G+    +A ++  QP    L  +++   V    +LG    + M V+AVI   S
Sbjct: 186 ISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSS 245

Query: 240 MSDSTWKKKI-----------NVMKTFKRYPNYLTCTEEKMRDVADFCFNTAKLDPGALI 299
           +S+ T+ +K+            +    +R P  + C+E+K+    +F      L+  AL 
Sbjct: 246 LSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALA 305

Query: 300 SYPKLFKLSLDKRVQPRYKVLEVLKVKSLL-----RNVKIARVLAQGEREFVKTYVVKYL 344
             P +   +L+KRV PR KVL++L+ K LL     +   +  ++   E  F++ YVV++ 
Sbjct: 306 KRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFG 365

[Close]

BLAST of IVF0004864 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 95/371 (25.61%), Postives = 168/371 (45.28%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLQFDEKHIQQYGAVIDFLKSHGFENTQIAKLVPREPSI 92
           T+ +L +S GL++    S  RK+ F++K+     +V++ L SHGF  +QI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPWVLRSSLDSHLKPSIFFLREILESDE 152
           L +    +L PK +FLQ  G     + +++ S P +L       +     F+++ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 KVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPSRNIAKMIAMQPLTIMLKVDRMINTV 212
                +C    L    L+  ++ NV VL   GMP + +  ++      +  K ++   T+
Sbjct: 174 SKNEKLCH--SLPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KTVKELGIEPKAGMFVYAVIVRLSMSDSTWKKKINVMK-----------TFKRYPNYLTC 272
           K V E+G +P    FV A+ V   M++ T ++K+++ K           +FK++P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 TEEKMRD-----------------------------------VADFCFNTAKLDPGALIS 332
           +E+KM D                                     +F          A++S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPKLFKLSLDKRVQPRYKVLEVLKVKSLLRN--VKIARVLAQGEREFVKTYVVKYLDK-- 354
            P +F  SL+KR+ PR  V++ L  K L+RN    I+ VL   ++ F+  YV  ++DK  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of IVF0004864 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 95/371 (25.61%), Postives = 168/371 (45.28%), Query Frame = 0


Query: 33  TIQFLTNSCGLSSGSPTSAGRKLQFDEKHIQQYGAVIDFLKSHGFENTQIAKLVPREPSI 92
           T+ +L +S GL++    S  RK+ F++K+     +V++ L SHGF  +QI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSNNLKPKFEFLQEIGFVGPLLPKLIISSPWVLRSSLDSHLKPSIFFLREILESDE 152
           L +    +L PK +FLQ  G     + +++ S P +L       +     F+++ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 KVIATVCRFPRLLTFYLKGILKSNVDVLVSEGMPSRNIAKMIAMQPLTIMLKVDRMINTV 212
                +C    L    L+  ++ NV VL   GMP + +  ++      +  K ++   T+
Sbjct: 174 SKNEKLCH--SLPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KTVKELGIEPKAGMFVYAVIVRLSMSDSTWKKKINVMK-----------TFKRYPNYLTC 272
           K V E+G +P    FV A+ V   M++ T ++K+++ K           +FK++P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 TEEKMRD-----------------------------------VADFCFNTAKLDPGALIS 332
           +E+KM D                                     +F          A++S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPKLFKLSLDKRVQPRYKVLEVLKVKSLLRN--VKIARVLAQGEREFVKTYVVKYLDK-- 354
            P +F  SL+KR+ PR  V++ L  K L+RN    I+ VL   ++ F+  YV  ++DK  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

The following BLAST results are available for this feature:

BLAST of IVF0004864 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	2.2e-10	23.55	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	5.0e-10	20.38	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.4e-07	25.71	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q6AUK6	3.0e-07	25.97	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	1.1e-06	26.80	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]

BLAST of IVF0004864 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZB3	6.8e-196	96.78	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BGD1	6.8e-196	96.78	transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5D3CX09	1.2e-160	80.91	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SXE1	2.1e-160	80.91	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CXX8	1.4e-156	78.76	Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of IVF0004864 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446995.1	1.02e-248	96.78	PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis ...	[more]
TYK15788.1	2.06e-202	80.91	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]
KAA0034131.1	4.15e-202	80.91	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]
XP_008445933.1	4.37e-197	78.76	PREDICTED: transcription termination factor MTERF2, chloroplastic-like [Cucumis ...	[more]
KAA0034116.1	8.82e-197	78.49	transcription termination factor MTERF2 [Cucumis melo var. makuwa]	[more]

BLAST of IVF0004864 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	4.9e-37	28.89	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	5.6e-33	26.95	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.3e-26	28.71	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.1e-23	25.61	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.1e-23	25.61	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 119..150 e-value: 0.16 score: 21.0 coord: 83..114 e-value: 4.6E-4 score: 29.5 coord: 249..280 e-value: 420.0 score: 6.8 coord: 191..221 e-value: 7.1 score: 15.6 coord: 281..312 e-value: 0.53 score: 19.3 coord: 155..186 e-value: 15.0 score: 14.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 247..331 e-value: 6.5E-12 score: 45.0 coord: 69..252 e-value: 5.7E-22 score: 78.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 20..354
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 130..343 e-value: 2.0E-34 score: 121.0
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 20..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004864.2	IVF0004864.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding