IVF0004845 (gene) Melon (IVF77) v1

Overview


Name	IVF0004845
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Prefoldin subunit
Location	chr09: 1822103 .. 1822549 (+)
RNA-Seq Expression	IVF0004845
Synteny	IVF0004845

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGTCAGTGAACATTCTCTTGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACTATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCAAGACTCCATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCATGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAGGTGAAAGCTAA

mRNA sequence

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGTCAGTGAACATTCTCTTGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACTATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCAAGACTCCATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCATGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAGGTGAAAGCTAA

Coding sequence (CDS)

ATGGCAAGCTCAAGTGAGAGTGAACGCAAGGAACCAGTGAATGAGCAAATGGTTGCAAACATGTACGGTGCTTTAAGGTCAGAATTGAATCAGATATACTCAAAAATCACAGAACTCGAAATGGAAGTCAGTGAACATTCTCTTGTTATTTCCGCAATTGAGCCACTTGACCCATCAAGAAGATGCTACAGAATGATCGGTGGAGTGCTGGTTGAAAGAACTATCAAAGAGGTCCTGCCGGCTGTCCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTCAAGACTCCATGAGGCATTGGAGAAGAAGAAGAAGGAGATATCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCATGATGGTGAGGCTAAGGAGGAAGACAGTGGGCGGAAAGAAGGTGCAGCCCAAGGAGTCTTAGTAGGCCCTGCAGGTGAAAGCTAA

Protein sequence

MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRKHDGEAKEEDSGRKEGAAQGVLVGPAGES

Homology

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BLAST of IVF0004845 vs. ExPASy Swiss-Prot
Match: Q9LJ98 (Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-44
Identity = 102/149 (68.46%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L+E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KHDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]

BLAST of IVF0004845 vs. ExPASy Swiss-Prot
Match: Q55GN3 (Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 52/112 (46.43%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 7   SERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRCYRMI 66
           S++K+ + E  +   Y  L+S+  QI S+I+E E +V E+ LVI+AI+ L+ +R+C+RM+
Sbjct: 2   SQQKQQLTENQIIEHYKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMV 61

Query: 67  GGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRI 119
           GGVLVERT+ EVLP +++N++G++EV+ +L E L  K KE++D  A YKI+I
Sbjct: 62  GGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113

[Close]

BLAST of IVF0004845 vs. ExPASy Swiss-Prot
Match: A1A4P5 (Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 62/143 (43.36%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRKHD 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+   D
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 GE--AKEEDSGR-KEGAAQGVLV 143
            +  AKE   G   + ++ GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of IVF0004845 vs. ExPASy Swiss-Prot
Match: Q9UHV9 (Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.9e-22
Identity = 62/143 (43.36%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           SS     K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SSGSGAGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRKHD 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+   D
Sbjct: 71  YRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 GE--AKEEDSGR-KEGAAQGVLV 143
            +  AKE   G   + ++ GVLV
Sbjct: 131 EKPAAKENSEGAGAKASSAGVLV 153

[Close]

BLAST of IVF0004845 vs. ExPASy Swiss-Prot
Match: B0BN18 (Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 0


Query: 3   SSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSRRC 62
           S      K  V+ + V   +  LR E   + SK  ELEME++EHSLVI  ++ +D +R+C
Sbjct: 11  SGGSGTGKGAVSAEQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 70

Query: 63  YRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRKHD 122
           YRM+GGVLVERT+KEVLPA++ NKE ++++I  L + L+ K KE+++   K+ IR+   D
Sbjct: 71  YRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLMGED 130

Query: 123 GE--AKE--EDSGRKEGAAQGVLV 143
            +  AKE  E +G K  +A GVLV
Sbjct: 131 EKPAAKENSEGAGAKSSSA-GVLV 153

[Close]

BLAST of IVF0004845 vs. ExPASy TrEMBL
Match: A0A1S3C9H2 (probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           HDGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of IVF0004845 vs. ExPASy TrEMBL
Match: A0A0A0KVR4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.4e-68
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of IVF0004845 vs. ExPASy TrEMBL
Match: A0A6J1INQ4 (probable prefoldin subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111479155 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPANES 148

[Close]

BLAST of IVF0004845 vs. ExPASy TrEMBL
Match: A0A6J1GVC8 (probable prefoldin subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111457883 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

[Close]

BLAST of IVF0004845 vs. ExPASy TrEMBL
Match: A0A6J1F1V5 (probable prefoldin subunit 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441610 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MAS+SESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASASESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEG+EEVISRL+EALEKKKKEI+DLEAKYKI+IRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGIEEVISRLNEALEKKKKEIADLEAKYKIKIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 149
            DGEAKEEDSGRKEGAAQGVLVGPAGE+
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGEN 148

[Close]

BLAST of IVF0004845 vs. NCBI nr
Match: XP_008459357.1 (PREDICTED: probable prefoldin subunit 2 [Cucumis melo] >XP_008459358.1 PREDICTED: probable prefoldin subunit 2 [Cucumis melo])

HSP 1 Score: 275 bits (702), Expect = 1.29e-92
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148
           HDGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of IVF0004845 vs. NCBI nr
Match: XP_004141456.1 (probable prefoldin subunit 2 [Cucumis sativus] >XP_031740999.1 probable prefoldin subunit 2 [Cucumis sativus] >KGN52492.1 hypothetical protein Csa_008742 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 2.06e-89
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEME SEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEASEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148
            DGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of IVF0004845 vs. NCBI nr
Match: XP_022956082.1 (probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefoldin subunit 2 [Cucurbita moschata] >KAG6582297.1 putative prefoldin subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018708.1 putative prefoldin subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266 bits (679), Expect = 4.15e-89
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPASES 148

[Close]

BLAST of IVF0004845 vs. NCBI nr
Match: XP_022979430.1 (probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefoldin subunit 2 [Cucurbita maxima])

HSP 1 Score: 266 bits (679), Expect = 4.15e-89
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRL+EALEKKKKEISDLEAKYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148
            DGEAKEEDSGRKEGAAQGVLVGPA ES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPANES 148

[Close]

BLAST of IVF0004845 vs. NCBI nr
Match: XP_038896587.1 (probable prefoldin subunit 2 [Benincasa hispida] >XP_038896592.1 probable prefoldin subunit 2 [Benincasa hispida])

HSP 1 Score: 265 bits (677), Expect = 8.38e-89
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60
           MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR
Sbjct: 1   MASSSESERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPSR 60

Query: 61  RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRK 120
           RCYRMIGGVLVERTIKEVLPAV+RNKEGLEEVISRL+EALEKKKKEISDLE KYKIRIRK
Sbjct: 61  RCYRMIGGVLVERTIKEVLPAVRRNKEGLEEVISRLNEALEKKKKEISDLETKYKIRIRK 120

Query: 121 HDGEAKEEDSGRKEGAAQGVLVGPAGES 148
            DGEAKEEDSGRKEGAAQGVLVGPAGES
Sbjct: 121 PDGEAKEEDSGRKEGAAQGVLVGPAGES 148

[Close]

BLAST of IVF0004845 vs. TAIR 10
Match: AT3G22480.2 (prefoldin 2 )

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-45
Identity = 102/149 (68.46%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L+E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KHDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

[Close]

BLAST of IVF0004845 vs. TAIR 10
Match: AT3G22480.1 (prefoldin 2 )

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-45
Identity = 102/149 (68.46%), Postives = 120/149 (80.54%), Query Frame = 0


Query: 1   MASSSES-ERKEPVNEQMVANMYGALRSELNQIYSKITELEMEVSEHSLVISAIEPLDPS 60
           MAS S S   +EP NEQ V NMY   RSEL+QIYS IT+LEM+VSEHSLVI+AI+PLD S
Sbjct: 1   MASKSGSGGLREPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQS 60

Query: 61  RRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVISRLHEALEKKKKEISDLEAKYKIRIR 120
           R+C+RMIGGVLVERTIKEVLPAVQRNK+GLEEV+ +L+E LEKKKK++++ EAKYKIRI 
Sbjct: 61  RKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRIT 120

Query: 121 KHDGEAKEEDSGRKEGAAQGVLVGPAGES 149
           K   E  +E   +KEG AQGVLVG A  S
Sbjct: 121 KQ--EDNKEGGNKKEGNAQGVLVGAASSS 147

The following BLAST results are available for this feature:

BLAST of IVF0004845 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ98	3.7e-44	68.46	Probable prefoldin subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At3g22480 PE=2 S...	[more]
Q55GN3	1.8e-22	46.43	Probable prefoldin subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pfdn2 PE=3 ...	[more]
A1A4P5	3.9e-22	43.36	Prefoldin subunit 2 OS=Bos taurus OX=9913 GN=PFDN2 PE=2 SV=1	[more]
Q9UHV9	3.9e-22	43.36	Prefoldin subunit 2 OS=Homo sapiens OX=9606 GN=PFDN2 PE=1 SV=1	[more]
B0BN18	1.1e-21	44.44	Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1	[more]

BLAST of IVF0004845 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9H2	2.4e-70	100.00	probable prefoldin subunit 2 OS=Cucumis melo OX=3656 GN=LOC103498515 PE=3 SV=1	[more]
A0A0A0KVR4	6.4e-68	97.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G638310 PE=3 SV=1	[more]
A0A6J1INQ4	1.1e-67	97.97	probable prefoldin subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111479155 PE=3 SV...	[more]
A0A6J1GVC8	1.1e-67	97.97	probable prefoldin subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111457883 PE=3 ...	[more]
A0A6J1F1V5	2.7e-66	94.59	probable prefoldin subunit 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of IVF0004845 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459357.1	1.29e-92	100.00	PREDICTED: probable prefoldin subunit 2 [Cucumis melo] >XP_008459358.1 PREDICTED...	[more]
XP_004141456.1	2.06e-89	97.97	probable prefoldin subunit 2 [Cucumis sativus] >XP_031740999.1 probable prefoldi...	[more]
XP_022956082.1	4.15e-89	97.97	probable prefoldin subunit 2 [Cucurbita moschata] >XP_022956083.1 probable prefo...	[more]
XP_022979430.1	4.15e-89	97.97	probable prefoldin subunit 2 [Cucurbita maxima] >XP_022979432.1 probable prefold...	[more]
XP_038896587.1	8.38e-89	97.30	probable prefoldin subunit 2 [Benincasa hispida] >XP_038896592.1 probable prefol...	[more]

BLAST of IVF0004845 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22480.2	2.6e-45	68.46	prefoldin 2	[more]
AT3G22480.1	2.6e-45	68.46	prefoldin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..42
None	No IPR available	COILS	Coil	Coil	coord: 86..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..148
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 19..117
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 12..122 e-value: 9.9E-24 score: 85.3
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 16..119 e-value: 1.0E-25 score: 89.7
IPR027235	Prefoldin subunit 2	PANTHER	PTHR13303	PREFOLDIN SUBUNIT 2	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004845.1	IVF0004845.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding