IVF0004761 (gene) Melon (IVF77) v1

Overview


Name	IVF0004761
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr08: 30022563 .. 30024181 (-)
RNA-Seq Expression	IVF0004761
Synteny	IVF0004761

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACAATCCAACGGACAAAAGCCACAACAATCAGATTATGTGGCAATCGCCGATCAGAGTTCCTCTTTCTCAACCACATAATAACCCAACCAAAATCCCCAATTTCCCATCTCACATTCTTCAATCCCTCCCTCAAACTTCTCGTAATGGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGAAATAGTGCCGAGTTCTGGCAGAGTCCAAGCCCGGTTCGGATTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGGAATTTCCGACCGGCCGCTGTGGTTTCCAGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCGTTTGGGTTGGGGAAACCGGCTGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCGAAGAATGTGGCTGGAGATATAATTGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCATACACGGAGGTATTTGGATTGCAGAGATTCCGTGAATGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGGGTTACTTGGCAAGACGCCGGAAAAGTGAGTATATTTTCGTTTCAGTTAAGAAATGTTAAATTACAATTGGTCACCGACTTCCTTTTATTTATTTATTAATTTATATACTGAAGGTCTTTCATTATATTTAGTTGTGGGTGTTCATTTGATTTAAAGAAATAATTTGATATTCTTTTTGTTGATTATGAACTAATTTGTTACAAATTTCTTAATACAACGATGACATCGTTACCTATTAAAAGTTCAAGTTCAAATGTAAAGATGTATTAAATAGGTTCCAAAGTTGATAAGATCTATATCATAATAAACAAAACTTTAAGGATTAATGATTTGATCATGTACTGAATTATTAATTCAGGTAGAATTAGTGGAAGGTTCATCCTACCTAGGCCAACCACTTCCCTTCTCCCTCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGTTACATTGAGTTCCAAAGAAACGCGGAGCTGGACCCAGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTTTGGGTTTGGCTGAGGACCCAGAAAAGAAAGCAGTGTTACAATTGGCTGAGATCAAGCATGCACGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTCACCGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACTACTATTATTGACAACTTCTCTTCTTAAGCGCCCCTTAATTCTCCACTACTCCTCTTCATTATTGTCTCTTTCTAGTTTGTATAAAACTTGACTGAGTTATGTGATCCTGAGCTGTAAGTAGTACTTTGCTTCGCGATTCGTATGTTAAATTATATTATATATCGTGTTACGACACAAATCAAAAACTGTTATTATTTATTTCATTTCCAAACTTTGTCTATTGGTTTTGAATCATTATTGAGGTGATTTTTTATTGCCTAAAATTTTGTGGTTTCAATTGGTGAAGATGAATCGGAAAGTAAAGTTATCGT

mRNA sequence

CCACAATCCAACGGACAAAAGCCACAACAATCAGATTATGTGGCAATCGCCGATCAGAGTTCCTCTTTCTCAACCACATAATAACCCAACCAAAATCCCCAATTTCCCATCTCACATTCTTCAATCCCTCCCTCAAACTTCTCGTAATGGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGAAATAGTGCCGAGTTCTGGCAGAGTCCAAGCCCGGTTCGGATTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGGAATTTCCGACCGGCCGCTGTGGTTTCCAGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCGTTTGGGTTGGGGAAACCGGCTGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCGAAGAATGTGGCTGGAGATATAATTGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCATACACGGAGGTATTTGGATTGCAGAGATTCCGTGAATGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGGGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTAGGCCAACCACTTCCCTTCTCCCTCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGTTACATTGAGTTCCAAAGAAACGCGGAGCTGGACCCAGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTTTGGGTTTGGCTGAGGACCCAGAAAAGAAAGCAGTGTTACAATTGGCTGAGATCAAGCATGCACGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTCACCGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACTACTATTATTGACAACTTCTCTTCTTAAGCGCCCCTTAATTCTCCACTACTCCTCTTCATTATTGTCTCTTTCTAGTTTGTATAAAACTTGACTGAGTTATGTGATCCTGAGCTGTAAGTAGTACTTTGCTTCGCGATTCGTATGTTAAATTATATTATATATCGTGTTACGACACAAATCAAAAACTGTTATTATTTATTTCATTTCCAAACTTTGTCTATTGGTTTTGAATCATTATTGAGGTGATTTTTTATTGCCTAAAATTTTGTGGTTTCAATTGGTGAAGATGAATCGGAAAGTAAAGTTATCGT

Coding sequence (CDS)

ATGGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGAAATAGTGCCGAGTTCTGGCAGAGTCCAAGCCCGGTTCGGATTTGGAAAGAAAAAGAGTCCGCCGAAGAAATCGCCGTCGTCTAAGGGAATTTCCGACCGGCCGCTGTGGTTTCCAGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTATGGATTTGATCCGTTTGGGTTGGGGAAACCGGCTGAGTATTTGCAGTATGATTTGGACTCGTTGGATCAAAATTTGGCGAAGAATGTGGCTGGAGATATAATTGGGACGAGATTTGAGAGCGCGGAAGTGAAATCGACGCCGTTTCAGCCATACACGGAGGTATTTGGATTGCAGAGATTCCGTGAATGTGAGCTTATTCATGGACGGTGGGCAATGCTGGCTACACTCGGTGCTCTCTCTGTTGAATGGCTCACCGGGGTTACTTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTAGGCCAACCACTTCCCTTCTCCCTCACTACACTAATCTGGATCGAAGTTCTAGTGATCGGTTACATTGAGTTCCAAAGAAACGCGGAGCTGGACCCAGAGAAAAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCTTTGGGTTTGGCTGAGGACCCAGAAAAGAAAGCAGTGTTACAATTGGCTGAGATCAAGCATGCACGCCTAGCCATGGTTGCGTTCCTTGGGTTTGCGGTTCAAGCTGCTGTCACCGGCAAAGGTCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACTACTATTATTGACAACTTCTCTTCTTAA

Protein sequence

MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

Homology

[Close]

BLAST of IVF0004761 vs. ExPASy Swiss-Prot
Match: Q07473 (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 2.9e-138
Identity = 240/284 (84.51%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 2   ATAAATSSFIGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 61
           A AAA SS +GTR+A  I P SGR  A FGFGKKK+ PKKS      +DRPLW+PGA +P
Sbjct: 6   AAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISP 65

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           +WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+A+ KSTPFQ
Sbjct: 66  DWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQ 125

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 126 PYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLP 185

Query: 182 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKH
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKH 245

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 246 ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 289

[Close]

BLAST of IVF0004761 vs. ExPASy Swiss-Prot
Match: Q9XF88 (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.1e-135
Identity = 236/284 (83.10%), Postives = 259/284 (91.20%), Query Frame = 0


Query: 2   ATAAATSSFIGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 61
           +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +   ISDRPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTV--ISDRPLWFPGAKSP 64

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLP 184

Query: 182 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKH
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKH 244

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 245 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286

[Close]

BLAST of IVF0004761 vs. ExPASy Swiss-Prot
Match: Q9S7W1 (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.3 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 8.4e-114
Identity = 206/270 (76.30%), Postives = 228/270 (84.44%), Query Frame = 0


Query: 3   TAAATSSFIGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKGISDRPLWFPGAK 62
           TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 122
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 182
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQP
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQP 184

Query: 183 LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEI 242
           LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEI
Sbjct: 185 LPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEI 244

Query: 243 KHARLAMVAFLGFAVQAAVTGKGPLNNWAT 269
           KH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 245 KHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of IVF0004761 vs. ExPASy Swiss-Prot
Match: Q93WD2 (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhcb4 PE=1 SV=3)

HSP 1 Score: 249.6 bits (636), Expect = 4.2e-65
Identity = 131/225 (58.22%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 52  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES 111
           LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSV------E 111

Query: 112 AEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDA 171
           A V++TP          PY+EVFGL RFRECELIHGRWAMLA LGAL  E  TGV+W +A
Sbjct: 112 AIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEA 171

Query: 172 GKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGL 231
           GKVEL +G+SY G  LPFS+T LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL L
Sbjct: 172 GKVEL-DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKL 231

Query: 232 AEDPEKKAV-LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA 268
           A + E++A  L+ AEIKHARLAMV+F G+ VQA  TG+G L + A
Sbjct: 232 ASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA 268

[Close]

BLAST of IVF0004761 vs. ExPASy Swiss-Prot
Match: Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.9e-39
Identity = 98/233 (42.06%), Postives = 128/233 (54.94%), Query Frame = 0


Query: 53  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFES 112
           W PG   P +LDGS  GD+GFDP GLG+ PA                             
Sbjct: 48  WMPGEPRPAYLDGSAPGDFGFDPLGLGEVPA----------------------------- 107

Query: 113 AEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEG 172
                           L+R++E ELIH RWAMLA  G L  E L    W  A +   + G
Sbjct: 108 ---------------NLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPG 167

Query: 173 --SSYLGQPLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPE 232
             ++YLG P+P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+
Sbjct: 168 GQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPK 227

Query: 233 KKAVLQLAEIKHARLAMVAFLGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID 281
           K   L++ EIK+ RLA++AF+GF V Q+A  G GPL N ATHL+DP H  I D
Sbjct: 228 KLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 235

[Close]

BLAST of IVF0004761 vs. ExPASy TrEMBL
Match: A0A5D3BBB3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00840 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.5e-161
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60
           MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of IVF0004761 vs. ExPASy TrEMBL
Match: A0A1S3BMH8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491174 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.5e-161
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60
           MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of IVF0004761 vs. ExPASy TrEMBL
Match: A0A0A0KXI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_4G308550 PE=3 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 8.1e-160
Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60
           MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of IVF0004761 vs. ExPASy TrEMBL
Match: A0A6J1IPG0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478268 PE=3 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.1e-153
Identity = 270/283 (95.41%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61
           ATAAATSSFIGTRL ++ PSSGRVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+A+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of IVF0004761 vs. ExPASy TrEMBL
Match: A0A6J1GFC4 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453669 PE=3 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.5e-153
Identity = 270/283 (95.41%), Postives = 277/283 (97.88%), Query Frame = 0


Query: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61
           ATAAATSSFIGTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESA+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of IVF0004761 vs. NCBI nr
Match: XP_008449241.1 (PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo] >KAA0045037.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa] >TYJ96289.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa])

HSP 1 Score: 573 bits (1478), Expect = 2.06e-206
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60
           MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of IVF0004761 vs. NCBI nr
Match: XP_004147887.1 (chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN54365.1 hypothetical protein Csa_017948 [Cucumis sativus])

HSP 1 Score: 568 bits (1465), Expect = 1.98e-204
Identity = 281/284 (98.94%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60
           MATAAATSSF+GTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of IVF0004761 vs. NCBI nr
Match: XP_038882769.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 563 bits (1450), Expect = 3.83e-202
Identity = 278/284 (97.89%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 60
           MATAAATSSFIGTRLAE+ P SGRVQARFGFGKKKSPPKKSPSSK ISDRPLWFPGAKAP
Sbjct: 1   MATAAATSSFIGTRLAELRPCSGRVQARFGFGKKKSPPKKSPSSKTISDRPLWFPGAKAP 60

Query: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120
           EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ
Sbjct: 61  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 120

Query: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180
           PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP
Sbjct: 121 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 180

Query: 181 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 240
           FS+TTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKH
Sbjct: 181 FSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKH 240

Query: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284
           ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 241 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of IVF0004761 vs. NCBI nr
Match: XP_022978220.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 548 bits (1412), Expect = 2.56e-196
Identity = 270/283 (95.41%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61
           ATAAATSSFIGTRL ++ PSSGRVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSGRVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+A+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of IVF0004761 vs. NCBI nr
Match: XP_022950626.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 547 bits (1409), Expect = 7.35e-196
Identity = 270/283 (95.41%), Postives = 277/283 (97.88%), Query Frame = 0


Query: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61
           ATAAATSSFIGTRL ++ PSS RVQARFGFGKKK+P KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 4   ATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPE 63

Query: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESA+VKSTPFQP
Sbjct: 64  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQP 123

Query: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181
           Y+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTG+TWQDAGKVELVEGSSYLGQPLPF
Sbjct: 124 YSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTGITWQDAGKVELVEGSSYLGQPLPF 183

Query: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241
           SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA
Sbjct: 184 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 243

Query: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Sbjct: 244 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 286

[Close]

BLAST of IVF0004761 vs. TAIR 10
Match: AT5G01530.1 (light harvesting complex photosystem II )

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-139
Identity = 240/284 (84.51%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 2   ATAAATSSFIGTRLAE-IVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 61
           A AAA SS +GTR+A  I P SGR  A FGFGKKK+ PKKS      +DRPLW+PGA +P
Sbjct: 6   AAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISP 65

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           +WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+A+ KSTPFQ
Sbjct: 66  DWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQ 125

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 126 PYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLP 185

Query: 182 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKH
Sbjct: 186 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKH 245

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 246 ARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 289

[Close]

BLAST of IVF0004761 vs. TAIR 10
Match: AT3G08940.2 (light harvesting complex photosystem II )

HSP 1 Score: 481.9 bits (1239), Expect = 3.6e-136
Identity = 236/284 (83.10%), Postives = 259/284 (91.20%), Query Frame = 0


Query: 2   ATAAATSSFIGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 61
           +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +   ISDRPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTV--ISDRPLWFPGAKSP 64

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLP
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLP 184

Query: 182 FSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKH 241
           FS++TLIWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKH
Sbjct: 185 FSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKH 244

Query: 242 ARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 285
           ARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 245 ARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286

[Close]

BLAST of IVF0004761 vs. TAIR 10
Match: AT2G40100.1 (light harvesting complex photosystem II )

HSP 1 Score: 411.4 bits (1056), Expect = 6.0e-115
Identity = 206/270 (76.30%), Postives = 228/270 (84.44%), Query Frame = 0


Query: 3   TAAATSSFIGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKGISDRPLWFPGAK 62
           TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 122
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 182
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQP
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQP 184

Query: 183 LPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEI 242
           LPFSLTTLIWIEVLV+GYIEFQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEI
Sbjct: 185 LPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEI 244

Query: 243 KHARLAMVAFLGFAVQAAVTGKGPLNNWAT 269
           KH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 245 KHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of IVF0004761 vs. TAIR 10
Match: AT3G08940.1 (light harvesting complex photosystem II )

HSP 1 Score: 266.9 bits (681), Expect = 1.8e-71
Identity = 133/181 (73.48%), Postives = 154/181 (85.08%), Query Frame = 0


Query: 2   ATAAATSSFIGTR-LAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAP 61
           +TAAA SS +GTR +++I  +S R  ARFGFG KK+ PKK+ +   ISDRPLWFPGAK+P
Sbjct: 5   STAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTV--ISDRPLWFPGAKSP 64

Query: 62  EWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQ 121
           E+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KSTPFQ
Sbjct: 65  EYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQ 124

Query: 122 PYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLP 181
           PY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L   L 
Sbjct: 125 PYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVSPLFFSSLLRLCLA 183

[Close]

BLAST of IVF0004761 vs. TAIR 10
Match: AT2G40100.2 (light harvesting complex photosystem II )

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-66
Identity = 123/169 (72.78%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 3   TAAATSSFIGTRLAEIVPSSGRVQARFG--FGKKK--SPPKKSPSSKGISDRPLWFPGAK 62
           TAAA S   G R+ +  P +GRVQARFG  FGKKK   PPKKS   +   DR +WFPGA 
Sbjct: 5   TAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGAN 64

Query: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP 122
            PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ES+E+K TP
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE 168
           FQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVE 173

The following BLAST results are available for this feature:

BLAST of IVF0004761 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07473	2.9e-138	84.51	Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9XF88	5.1e-135	83.10	Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9S7W1	8.4e-114	76.30	Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q93WD2	4.2e-65	58.22	Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhc...	[more]
Q01667	8.9e-39	42.06	Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of IVF0004761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBB3	2.5e-161	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BMH8	2.5e-161	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KXI3	8.1e-160	98.94	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1IPG0	1.1e-153	95.41	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1GFC4	2.5e-153	95.41	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of IVF0004761 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449241.1	2.06e-206	100.00	PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis m...	[more]
XP_004147887.1	1.98e-204	98.94	chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN5436...	[more]
XP_038882769.1	3.83e-202	97.89	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]	[more]
XP_022978220.1	2.56e-196	95.41	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022950626.1	7.35e-196	95.41	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]	[more]

BLAST of IVF0004761 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01530.1	2.0e-139	84.51	light harvesting complex photosystem II	[more]
AT3G08940.2	3.6e-136	83.10	light harvesting complex photosystem II	[more]
AT2G40100.1	6.0e-115	76.30	light harvesting complex photosystem II	[more]
AT3G08940.1	1.8e-71	73.48	light harvesting complex photosystem II	[more]
AT2G40100.2	1.8e-66	72.78	light harvesting complex photosystem II	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 53..284 e-value: 3.7E-70 score: 237.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 59..255 e-value: 4.9E-51 score: 173.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..52
None	No IPR available	PANTHER	PTHR21649:SF71	CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC	coord: 2..284
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 46..282
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004761.1	IVF0004761.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding