IVF0004726 (gene) Melon (IVF77) v1

Overview
NameIVF0004726
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Locationchr08: 20284661 .. 20301682 (-)
RNA-Seq ExpressionIVF0004726
SyntenyIVF0004726
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCAAGCGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGTCTGCGAGGTCTTTCTTTTACTTTCTTTCTCCTTCCCCCCCGCCTTTACCTTCCTTTCAAACTCTTTAATGCATCCTTTTTTCTTCCTAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGAAAGGTTCATCTCCTCATCCCTATTCTTTTTTTTTTTTTTTTTCTTTTTTCTCTCTATCTCCCTGTGGGTGGATGAATTGGGTTTTCGTTCTCCGTTTTTTTTTTCTTCCTAACTTTCCTTTCTTTCTAGGATGTTTCACTTTTGTCTGTTGCATTTGTCTTTGTTGTAGTTTTGAATTGCCAAATGATGCTTTAGGGATGGTTAAGTGATTACAATGTGGTACTTACTCACTAACAACTCACCTTTTAATTTCAACTTAGGCTATCCCTATGTTTGATATCCCCTCACTTCCACGTATATGCTTCCAAGCTTTGCCTGAGATTCCTTGAACATACGCTCCTTCTAGGTGTGAGCTTTCTTCATCCTCTGTATCCTACTTAGGCTCCTACTAAGTATGGAATAAACCCTATTGCTATTTCACTCACAGTGAAAGACACAAGTGAATGCACTTAGCCTAGTTTAGATGACAGTCGATAACATCCTCCACAGATTTGGAGCATAGACATGATGATATGCTGATTTCCCAAATATTAGGAAACGGACATGTCAGGGATACCCTATTTTCTTACATTTTTCTAGAATATAGTTAAATTTAACGTAAAATTGATAAAATGTTTGAGATTGGATGGGTAAACGGCAAGAGGCAATAGCTGTAAGAAATAAAGCATACTTGAGTCCTTGATCCTTAATGTGCACGACAAGTCTGGGAGTTGAAATCAAATGTTTATGTTTATGATATTCTATTTAGGTTTTAGGTTTTATGATATTTTTATATGTTTTAAAAAAGGAAGTTGATGGCCTTTAAATTTGGGTTCAAACTTAAAATTATCCTTTAATTTCTTTTAGTGTGTCCGTGAAGTGCCTTCAAGTGTGTCCAAAATTCAAAAATAAAAATAAAAATTAGGACATGCAAATTGGCTTGTCGGACATGTGTCCAGCTGAATCCGTGTCTGATAGGTATCTGACACCGATACCACCTTTAATATGAAGTGTCCCTGCTTCATAGCTCAACAGTGAAGTTCACACACAATTATTGCAGTACATCAAAAAGCTCTCTACAGAAGTATTCACCACAAGGCGTGACAATGATTGTGTGCAAAAAACATGCAACAATAACAAGCACGATCCTACACCATATATATATATGATGCTGCCTTGTGGAGATCTTCCAAAACAGAATAAAATCTTTTATGCAACCAGGAAGGAAAATAGCCTTGCAACATTGCACTGCTCGCATTGTTTTTTTTCCCTTCATGAAACACAATCATTCATTAAGGAAAAAAAAAAAATGAAAGAATACAAACATAACAAAAAAACAAGCCCACAAAATCCCTTTGAAGTAAGGGTTTCCAACTTAGTAAAATGCTACATAGAGGATATAATTACAAAAAATCTTCGAGACTGAAGCCCAAGAAACATGTAACATCACCAAGGACCAAACATCACTAGCCTCTTCTACACTAATCTTGCAAATTGACAACTCTAGATCAGGTGATTTAGGTCTTCCTCTGCCTTTTAACAAAGAATCAACAAAAGGGTGCCATAAGTGAATATTTCTTATGTAGAAGCCTATTCAAAGTGTTCACATGACCAAGTAAAACTTGCCTAGTATTATCAATCTTAGTCCTCCAAAGCACATCAAAGATTGACTAGTTAGCAAGAGAATGATCTGATAACGCCGAAATGGGAATTACAAAAAAAACTTAAAAGAGGGTTAGGATTCCAAACACAAACATCCATTCTTTCAAGTCTATAATTGAAATCATCAAGTAAAGATAACAAAGAGTCAACCTTTATTGTTTCCCTACTGAACAAAGAAATACGGAACCCAAAGAAAAAGACACTGAGCTTCTCGACTAAACTAAGAAGTCAGAAATAGAATGGTTTTTATACGAAGAAAGATGATATAAATTAGGAAACACATATTAGAGGGGTCTAATCCCCACTTATTGATCCTTCCACAACTAAGTATCCATGCCTTTGCCCTATCGCACAAAAACTATGAAGGGAGAAGGAAAGGAGCTAAAGAGAAATGTCTTTCCACAGGTTCAAGAATGAACGCTTGACCCCTTTGGACAATCTTTCAAAGGGATGAGGGCTATACCTTTCATAAATGAGGACTAGATACATAATATTTTGCCTAACAAGTTACCTAGAGTAAAAGTAATTGAAAGTAGAGATAAGAACACACAAATTTACGTGGAAACTCAAGTACTGGGAGAAAAACCACGATATTTTTCTTTTTATTATATTCTGATAATAATACAATAGGTACAAGAGGGAATAAATAGAAATGTACAACTTAGCAATGAGAGAAAAAGTTCATGAATAATCAACACCATAGGTCAGAGTAAATTCTTTTGCAAATAACCTTGCCTTGTGTCTGTCAAGTGTCCCATCTGCTTTGTATTTGAGAGTGAACACCCATTTGCATCCCACAGGCTTGTGTCCCTTAGGTAGAGCACAAATCTCCCAAGTATTATTATTTTCAAGAGCTTCCATCTCTTCTATGATAACATTCTTTCGTTCAGGACACTCTAAAGCAATGTGAATATTTTTCGGTATTGTGGTAGAGTCAAGGCTGACAGTAAAAGCTGTGAACTGTGGTGAGAGATTCTCGTATGACACATAATTAGATATGGACTACTTTGTACAGGACCTAGTACCTTTTCTCAGTGCAATAGAAAGATCAAGAGAAGGATCACACTTGCTAGTATTTTCAAAATGGTTTAACTGAGTTTCATTTTCAGTATGTTTAGCAACAACCTTGTTCTCATCAATCCTGTCTTCTCTGCCGGTAATGACCCCATTAATACTATCTTGCTCACCTATATCTTCCAGAACAACTGTCTCGAACCTGTCATTCTCACTTGCCTTACTGTTGGTATATGAGTTAGTTGAATTTGCCTTAGGCCTGTCATTCTCACTCATTCTGTTATTACTATGTGAGTTAATGGAATCAGTCATACCTTCAGAATCCTGGATTGGAGCTGTCTGAACAACAGGAGACTCAACTCCCTTTTTGAGATTTCTCCTATAGTAGGTTTTTCAAGGAACTTGATTTGTGGGTAGGACTGTACTGTGAGAGCTTGGGTCAGGTAAGGTAACCACAGTAGGACAAGTAGACTCAAAGCGTATAGTTAGACTTTCCACTCACACTCTTCCCCTGAAGTAGGCCAACAGAAAAAAAAAGGACGATCTTCAATAAAGGTGACATCCATGGTAACGAAGTACTTACATGAAGATGGGTGGAAGCATTTATAGCCTCGTTGGTGGAGAGGATACCCAACAAACACGCAAGCTTGAGCTTTAGGAGTGAATTTAGTTTGGTTAGGATCATGACTATGAACGTAGGTAGTGCATCCTAATACCCAAAGGGGAATATCAAGGATGAGATGCGTGGAAGGATAGGATTCTTTGGGGCTAACGGTGTCTGGAAGTGAAGTACATGGGAGGGCATGCGGTTGATGAGATGAGCGGCAGTGAGAATGACATCACCCCAAAGATAGGAAGGGAGAGAAGTTGACAACATAAGGGAATAGGCAACTTCCAAAAGATGACGATTTTTTCGTTCGACAACCCCATTTTGTTGAGAGGTGTAAGCACAGGAACTTTGGTGAACAATTCCTTTAGAGGATAAGAACTCGTTAAGAGAGTGGTTTTGAAACTCACAACCATTATCACTCTGCAAGATTGCAATCTTTCTATTGAATTGTGTTTCTATGGTGTGATAGAAGTCCTGGAATGTGGAGGTAACTTTGGATTTGTCGGAGATCAGGAAAACCCAAGTAAGACGAGTATGGTCTTCAATAAAGGTCACAAACCATTGTTTCCCGGAGGAGGTAGTGACCTTGGATGGTCTCCAAACATCACTATTGATAAGAGAAAGGTCTTATAGGTTTGTGAGGAAAACGAGACTCGATGTTATTTCGCTTTTATGCACACATCACAAGCTAAGGAAGAAACATCAACTTTAGTAAAGAGAAGAGGAAATAGGTATTTCATATATTTAAAGTTGGGATGGTCTAAACGAAAATGCCACGGCATAAGATTTTTTCAGAAGTGGAAAAGTAGGAAGATAAAAGACTCGTCCTAGAAATGCTACAAAAGGAGGCATCATCATCAAGCAAGTAAAGACCCCTATTGTGTTGGACAGTGCCAATCATCCTCCCCGAGCTCAGGTCTTGAAAAGAAGCAAAATTAGTTAAGAATGTTACTTTGCAATTTTAATCATGAGTAATCTTGTTAATCGACAGAAGATTATATGAAATTCGTGGCACATGCAACACATTGGGTAATGAGAGCCCATTAAAAAGAGAAATCTGCTCTTTCCCGACAATGAGAGCCAAGGAGCCATCAACAATTCTTATCTTCTCATTCCCAGCACACAAAATGTAGGACACAAAGTGTTCAGAGGAACCGGTTAAATGATTTGTGGCACCAGAGTCCAAAATCCAAGGATTCTTACCACCAATACTAATGAGACTAAAGGCCTGAGGTATACCTGACTGGACAATAGCTCCAAGTGTGTTAGACTAGCATTCACATAGGAAGAGGATAAAGTAGGGAACGAGGTTACCGGATTCTCATAATACATTGGTACAATGTTGGATGTCGTCTCTAGGTAGCCTCAATTGCTGCAATCTATTATCGAAGCTCTTTCAGTTGCTGTTGAGCTATTCCTAAAGAAGAGGAAGCGTGCACGTTAGGGTTGGAATGTGCCCAAGGTTCACCAACTTCAAATATTGAGGGAATTTGAAGGTTCCTAACATCAAGATGATGACTAAGGTCATTGGGTGACAACACATACGGATTCGATTGCAGAAGCTGCAGTGGTTGGTCGAAACTAGGTGGCAGCATATTAATCGGCATGTTGGGGATACTATAGGCTGCGGATGAAGACGAAGGTGGCACAGTTAGGTTGGCCGGCGTCGTCTGAATAGGATGGGCCGGCACGTGCGGTATTGTGTGGACATTTGGCGGTGGCGCGTGGCTGGTTTCTGGTGGCGCAGACGACGAGAAATTGTGTGGAATTATGATTCCCGGCGTTTTCTGAATGCGGTGGAGCCAGTCTTCCATTGCAACGTTGATCCGAGCATCGGTGGTAGCAGCAACGACAGTGCTAAAACAGGCAGTTGTGCTCTTTGTTTTATTTCCATCGCTAGTTGTGTTGTTTAGGATTTGTTCCATGTACCGCTCTGATACCATATTGAAAGTAGAGACAAAGAACACACAAATTTACATGGAAACCCAAGTACCGGGAAAACAACCACGATATTTTTCTTTTTATTATTTTTTTATAATAATACAATAGGTACAAGAGGGAATAAGTTGATAAGTACAAAGAGATGAAAAAAAGAAAGAATATTTAGGGCAAATCTACCAGTGAGATAAGCTCACTAATTTTAGCAGTAGCCAATTTAACTATATTAACAACTCTAGACATTGCTCAGCTGTCTCTTAGCTATTAACAGTCTGCAGTTTCTTAGAAAAGTTAGAAAGAACAATTGTGTAGCATAATGGGTTTTTAATTCTTCTTTATAGGTAGATTTTGGGATAAGTCTTGAGAGTGAAGTGTGTTTATACAAAGAGACTGTGTGTACAAACTCCAGAATTTTGAAAAACTTAGGTTAAACAGTTAATTTAAATTGGCTTAAAATACCTTAAATGGGGTATCGATGGTGGGTCTTGTTTCACTATTTTTTCCGAAATAAATTTGCATAAGGAGTGACCTTGGTGTGTCGCTGGAGTGTCCTGAGTGCAGATGTGTCCGAAAGCAAAACAATAATAAAAAATAATGGAAATGCTAGCTAGTGTGTTGGAGGCAGTTGGAGTGTGTCAGTGTCTAACACTTGTTCGACGTTACACTTCTCGAGTTTGAAAGTGTGAGTGCTTTATAGATTAATTTCAGCTTTATCCTTTTTAGTATGTGTATATGAACTATAACATTTCAAAATGGTGCATACATTTTTTTATTTTAATCTAGAAATGTTGAGATGTCGCAAAGACACAAGCATACATGTGAGTACTCTTTTGTTATTGGAAAGAGAGGATATGCACGATGCAGTGCTTTAAAAAAACCTCCCAGCGAACTATAACATATCCTTTGCGAGGCTCACAAAATAAGGCGCGACTCAAGTGCATGCCTTTTTGTGAAACCCCAAGGCTCAAAGCCCTGCGCCTAATGGACTTTTATTCTTTAAAAAATGTAAATAAATAATTAGGGTTTACCCTTCTTTATTAACTAAGAAAACCAAATTTACTAAGCCGAAATGCAAAATTTCTCGTGTTTAGAGGTCTTTTTTTTTTTTTCATATTTCCACTTCAACCATGTTTTTTCTTCTTAATGTAGTACTTTTATGTATAATGCGCCTCATAAAAAAAGCGTGCGCTTAAGCCCCATAAGACTATTGTGCTTTATTTCACCTTGATTTTTTAAAAAAACTGGCACGATGGAGAAGGAGATAGATAATTGAAGTAAAAAGTGAAAGGGAGGGTATATCTATCAAAGAGTGAGGTTGGTCCAAGAGTAGAAGAAATCATTTGTGGAGGGTAGAATTCTCATTTCTTGTTTATCATGAAAGCTTTTAAATATTTCGCTTTTTAAAGCAAGATTTCTTGCTCAGTCTCTGATGCATTGTAACAATCTCTGTTAAGACCCTGTCCCTGCACTCAGAAAAATCTAACACAATGCAAAGAAACAGAGGCAGCACCCTGTGGATCTTTATTTATATAATAGGGAGAGTTCATAGTGAAAGATTAACAAAACACAAAGGAAATAGCAACAAACAGAGAATGAAGAATAGAAGAAAAACAAGCTTAATATTCTCCAGCAATTCGAGAAGCTGGTGTCTCCCTAAAAGCCTCCACAACAGCTTTTCATACCAAAAAACAAGATGCCTCACCAATCCCTATAACACTCCTTAAATACCTCTTTTCCTCTAGTGGGACCCTCTTACCCAAAATATTTTATTGAAAGCAATAAACACGAAACCGGTTTACGTGGAAACCCAAGAACCGGGAGAAAGACATCGTGGTTTTTCTCCCGGTTCTCGGGTTTCCACGTAAACCAGTTTCGTGTTTATTGCTTTCAATATGGTATCAGAGCTGCTGTAAGAATAGCATCTCCCCACAGGTATGAAGGAAGGGAAGTGGAAAGCATAAGGGAACGGGCTACTTCCAGAAGGTGACGATTTTTTCGCTCGGCCACTCCATTTTGTTGAGGAGTGTAGGCACACGAGTTTTGGTGAACAATCCCCTTAGAGGCTAGAAATTCACTAAGGTTATGGTTTTGGAATTCTCGACCGTTGTCACTTCGAAGAATAGCAATTTTTTTATGGAATTGTATTTCAATGGTGTGATAGAAGTTTTGAAAAATAGAAGAAACCTCAGATTTATCGGTGATAAGGTAGACCCAGGTAAGACGGGTATGATCATCAATGAAGGTTACAAACCACCTTTTCCCAGATGAGGTGGTGACCTTGGAGGGGACCCCAAACGTCACTATGGATAAGTGTAAACGGCTGTGTGGGTTTATATGGTTGTGAGGGAAAAAAACACGATGTTGTTTTGCCCAAATGCACACATCACAAGATAACGAGGAGACATCTATTTTAAGAAAGAGATGGGGAAACAAATATTTCATATACGTAAAGTTCGGGTGACCTAACCGAAAATGCCACAACATAAAGTCATGTTCAGAGGTGTTAAAATAGGAAGACAGTAAACTAGTCGTAGAGATACTACTACCGGAGGTATCATCATTAAGGATATAAAGTTCCCTGCTATGCCGGGCAATGCCAATCGTCTTCCCTGAATTCAAGTCCTGAAAGCAAACAGACTCAGGTAAGAAAGTAGCTTTATAGTGCAGCTCACGGGTGATCTTACTGATAGATAACAGATTGTAAGAAAGCTTAGGCACATGTAAAACATTCTGGAGGGAGAAACAGTCAAAGAGGACTATTTGTTCTTTTCCAGCAATTGGAGCTAAAGAGCCATCGGCTATCCGGATTTTCTCATTACCGGCACAGGGGGTATAAGTGACAAAATGCTCCGAGAAACCTGTCAAGTGATCTGTGGTCCCCGAGTCCAAAATCCAAGTATTCGTTCCATCAACACTAATAAGGCCAAAGGACTGAGACATACCTGATTGAGCAATGACACTTAGAGTAGGAGAGCTGGTCTGACTAGCAGTAGAGCCAATGGGCTGAGAGGTGCTAGCAGTCTCCCTAACATCGGTACGCCTTAAGTTCTGTTGCTCCTTGGAGGAGCTTTTGTTACCTCTTGGGGGCCGACCGTGGAGTTTCTAACACCGATTCTTGGTATGCCGTTGTTTCTTGCAGTGCTCACAAATGAGAATTGGTTTCTCATTATCATGAGTCAAGGATTGAGCACTAAAGGCAACAAAGTTAGTTATATAATTTGAAGGCACGTTAGGAAGCGAAATTACCGGGTTCTTGGAATACATCGGTAGATTGGTCTATGCCAAAGATGTACTAACTTCAAAAACAGCTCTCCTATAGGTATGATTAATCCCGAGACCATGAACATATGGCTGTCCATAATCGGAGGGTGCTGATGGCTCGCCCACTTTAATCCACAATCTGTTATGGTGTTGGTCAACTCCGTTTCTATAGCAGAAAGGTTGTTGTAAAGGGTCGACGGACAGATTTGCACTGCTGTACAGATTTGCATTGTTGTACAGATTTGCACTGCTGTACAGATTTGACAGTTTTGAAGGTTGCTGTCCGGCGGCAATGGGCGGCGGCGGATGACCGGAAGGGTGAGATGGTTGGACAGGTGACGACGCGTAGAAGCAGATGGGATGGACGGTGAGATTAACGGGTGGCGGCGCGTGGGCCCACGAGCTCGATAGAGACGGCCCGTGAATTGGTTCCTGGGCGAAAAGTTGTGCGGACGGCGGCGGGGGTTAGCCCATTGGATAGATTGGCGGCGTCTGAATCCGGTGGAGTAGTTTTTCCATGGTGGTGTCCACGGCGGCGGCTGTTTTGGTCCAGGTGATTCCTAAAATTTTTTCTAGGGTTTCGTTGTTGCTTCGCTCTGATACCATATTGAAAGCAATAAACACGAAATCGGTTTACGTGGAAACCCGACAACCGGGAGAAAAACCACATAAATCCTACAGAACCGACCCTATTTTCCCGTTAGCCATCTTCAGGGGGAGAGTGTGAGTGAAGAGTCTAACAGCACCTTTGAATTTATCGAACCTACTCTTAGTACCGTGTCTGACATTGATCCTCACCCTATAATCATACCTACAAACCAAGTTCCTTGGAAAACATACTACAGGAGGAATCTCAGAAAGGAAGTCGGGTCCCCTACTAATCAACCGCTGGCTCCAGTCCAAGACTTCGAACCTCCTCGAGACGAAGGTATGGAAAACCCTACAGAAGCTTGTACTAATAATACGATGAGTGAGAATGACAGGTCTGATGCTGCTGTTCTTGAAAATATGGAAAAAAAAACCATGGTGATGAGATTGAGGTTAGAATAGAAACTAGTAACGATGAAGCTGAACAGGGCCATACAAGGAAACATGATGAGTATGATCCTTCTCTTGATCTTCCTATTGCACTGAGAAAAGGTACTAGGTCTTGTACAAAGCACTCTATATCTAATTATGTGTCATACGAGAATTTATCACCACAGTTCAGAGCTTTTACTGCCAGCCTTGACTCTACCACAATATCGAAAAATATTTATATTGCTTTAGAGTACCCTGAATGGAAGAATGCTGTTATGGAAGAGATGAAAGCTCTTGAAAAGAATAACACTTGGGAGATCTGTGCCCTACCCAAGGGACACAAGCCCGTGGGATGCAAATAGGTGTTCACTCTCAAATACAAAGCAGATGGAACTCTTGACAGACACAAGGCAAGGTTAGTTGCAAAAGGATTTACTCAGACCTATGGTGTTGATTATTCAGAAACTTTTTCTCCTGTTGCTAAGTTGAATATTGTCAGAGTCCTTTCTGTTGCTGTAAACTAAGATTGGCCTCTATATCAGTTGGATGTTAAAAATGCTTTTCTGAATGGAGATCTAGTAGAGGAGGTCTACATGAGCCCTCCGCCTGGTTTTGAAGCCCAGTTTAGTCAACAAGTTTGTAAACTCCAGAAATCCTTATATGGTCCGAAACAGTCACCCAGAGCATGGTTTGACAGATTTACTACTTTTGTCAAGTCCCAAGGATATAGTCAGGGACACTCTGATCACACTTTATTTACAAAAGTTTGCAGTTCTGATAGTTTATGTGGATGACATCGTTTTATCTGGAGATGATCAGGCAGAAATTAATCAACTTAAGCAGAGAATGGGTAATGAATTAGAAATCAAGGATTTGGGAAATCTGAAATATTTCCTTGGAATGGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAGAGAAAATACACCCTTGATCTGCTAACCGAGATAGGTATGTTGGGATGTCGTCCCGCTGACACTCCTATTGAATTCAACTGTAAACTAGGAAACTTTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTGGGTAAATTGATTTACTTATCTCATACTCGTCCTGATATTTCCTTTGCTGTTAGTGCCGTCAGCCAGTTTATGCAAGCTCCCTATGAGGAACACATGGAAGCTGTCAAAAGAATTTTGAGATACTTAAAAACGACACCTAACAAAGGGTTGATGTTTAGAAAGACAAACAAAAAGGCCATTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGTTGACAGAAAGTCTACCTCCAGTTATTGTACCTTTGTTTGGGGTAATCTTGTAACTTGGAGGAGTAAGAAACAAAATGTTGTGTCCAGAAGCAGTGTTGAGGTTGAATATAGAGCTATGAGTTTGGAAATATGAAGTCCTGTCTGATCTTCATCAAGGATGTGAGACTCCATTGAAGCTTTTTTGTGATAATAAATCTGCTATTAGTATTGCTAACAACCCAGTTCAGCATGATAGAACTAAACGTGTTGAGATTGATCGACATTTCATCAAAGAAAGACTTGACAGTGGGAGCATATGCATTCCGTACATCCCTTCGAGCCAACAGATTGCTGATGTCCTCACCAAGGGGCTTCTCAGACCAAACTTTGACTTTTGTGTTAGCAAGTTGGGCCTCATTGATATTTACGTTCCAACTTGAGGGGGAGTGTTAGAATTATTTTTGGAAAGAATAATATATAAGATTTTATTTCCTAAATATTTCCTAGATGTTTTCCTTTCCAAAAATAATTCTAACATATTCTTTATTTACTTTTTCTCAATTCTTTTCCTGGGTCGGGTTGTCTACGTGGGTATACTTTTTTCTCTCCCTACGCTTGTAGGTATGTATGATAGGGGCCTCACAATACCCGCGGGCTCGAAATTCACCTTGTCCTTAAAGGTGAAATGAAGGGTATTGCTGGTTTATAGCGTAAATTGACTCGTCGCTTCACTATCATGTAGTCCCTTCCATTTTATTAGCCATTGGTTAGTTCCAACGGACACCCAAAATGGCTTTAGGTTCGACTTGTAGTTCAAATTCTTCGGTCAATGCTGGCGGTAAGTGCTGCACTTGTGTTTTTCTCAGCTTCAATTTTAGCTGCAAAACGTGGAACACGTGTATTATTGGCTCGGGAGGAAGGTCTAGACGGTAAGCCACTTCCCCAATCTCTTTAATGATACGGTACAACCCATAGAATTTTGGAGCTAATTTTTCACAACATTTCCTTGCCAATGACCGCTGTCTATAAGGGCGCAATTTCAGTTCACGACAATGTAGATCAGCTTGTTTTTTCATTTTATTTTGCGCAATCAATAGGTTCTCCTTCAAGGCATTGATCACTAAATCTCTTTCCTTTAGTAGCTGTTCGACACTGTTGTTATTAGATTTCCTGTCTCTATAATGCACCAGTGGCGGTGGTGGCCGGCCATATACTATTTGGAAGGATGTCGTTCTTGCTGATGAATGGAAAGTGGTGTTATACCATGGTTCCGCCCAAGGGATACACTTGTGCCATTTCGTGGGTTGTTCGTTGCAAAAACGACGTAGATAGGTTTCGAGGCAACAATTTACCTGCTCCGTCTGCCCGTCGGTTTGAGGATGAAAGACCATACTCCTTTTCAGCGACATTTCCATGGCTGTAAATAATTTCTTCCAAAAATGACTCAAAAACATCTTGTCACGATCAATTACAATTGAGTTCGGTATTCCATGTTTACTAATGATCTTTTCAACGAATTTCTCAGCCACTTGTTTCGCCGCGAACGAGTGCTTCAAGGTTATGAAATGCGCCATTTTACTCAATCGATTCACTATAACCATGATACTGTCATATCCTCAAGCCTTAGGTAAACCCTCAATGAAATCCATATTCTAGTCTTTAAGGATTAAGTTGGGTAATGGTAATGGTTGTAGACTCGTCGGAGATAGTGCTTCAGTTTTATTCCTTTGGTAGATTTCACATTGTTCGACATATTTTTTTAACGTCATTTTTCATGCCAATCCAGTGTATTTCTCTGTTCATCCTCTCGTAAGTTCTGAGAAACCCCGAATGACCTAATACCGAGTCAAGGAAAGTACGAAGTAACGATGGAATGAGAGAAGAGTTTTTGGGCAGAACTAACCGCCCCTTGTAGAGTAAATTGCTCGACACCCACTGATAGTTTGCTTTCCCTTCCGGGTTTTCCTTCAGAATATTAATTATTCCTTACGGTTCTTCATCTTCACCTCAGCCATCACCGTTTCAATATCCAACAGCGTGTGGGAGCTTAAGGTATTTAGCTCGGCTGAGTGCTTCACTCGGGATAAGGTGTCGGCAACTTTGTTTTGTAGTCCGGGCTGATACAAGATTTCAAAATCATATCTCAGCAATTTAGTTAACCATCTTTGAAATTGTGGCTGAACCTCCCGTTAGCAAACAACTTATTGTCCATCATCACATTAAAAACTACTCCCAAGTGCCTCGCATGTTCAATGATGTCCTTGCTGTAAATCAGTATGTCGTCAAAGAAAACTAGCACGAATGGCCTTAGGAAGGGCCGGAAAATCTGATTCATGAGGGATTGAAAGGTTGCCGGCGTGTTGGTCAAACCGAAGGGCATAACCAATAATTCATAGTGTCCCTCGTGGGTGCAAAAAGCCATTTTCTCGATGTCCTCCTTCATCCGAATTTGATGGTAACCCGAGCGTAAGTCTAATTTCGAAAAAGCCTTAGCCTCATGTAACTCATCCAGGAGTTCTTCTCTAACTAGAATGGGAAATTTATCGGCAATAGTTACCTGATTCAACTTACGATAATCAACGCAAAATCACCACCCTCCGTCCCGTTTCTTTACTAGTAACACTGGATTGGAATAAGGACTTCGATTGGATCTGATAATTCCCGCCTGAAGCATTTCTGATACCAGCTTTTTTATCTCTTTTTTCTGTATGTACCCATACATGTGTGGCCACACATTGATGGGTTTCTATCCGTCTACAATCACTATTCGATGGTCCACGGCCCTCTTCGGAGGTAACCCCTTTGGCGTCTCAAATATGCCTATGTATCTTTTCAACACACTTCTAATCATTGGCAATTTCGATTCCTCCCCTTCCTCCTCGGAGTCTACATTAATTTCATTCTTTTGAAATTGTAACAAAAATCACTGGTCCTCTTCTGCCCATGTTTTGGAGATCGTTTTCAAAGAACACTCTGCTTTTGTCAGTGACGGGTCTCCTTTTAACACCACTTGTGTCGTCCATGCCATAAACACCATTGTCATGGACGGCCAATGAATCCCCATAAATCTGGTAGTGCTCAGCCATTGCATACCCAGAACCAAATCAATTCTTCCCAGTTCAATCACCAAGAAGTCTGCCACCGTTGTTAATTCCGACAGCTTGACCTCAACTTTTTTGCATATCCCTTTCCCTTTCAATGTGGTTCCATTGCCAATAGTCACCCCAAACTTAGTCTTCCCTTCCAGTGGTAATGCTAACTCCTCCACTATTCCTTGATGGATGAAATTGTGCGTTGCACCACTCTCACTGAGAATAATTACCTTTCTGCCCCTAACTGACCTCACAACTTCATCATACCATTCGAAGTGAACCCCATAATGGTTTGAAGCGATATTTCGCTCTTACTCTTGACTTCTAAAGTTTCAAACTCCACACCTTCTGCCTCATCTTCTCCCTTTTCCTTCTCATTTTTCGGTTCTTCTTCTTCATTCGCGATGAAGAACATCAACTTACAATTCGTCTTACCCTTGCATCGGTGTCCCGGCGAATATTTGTTGTTACACCGAAAACACAACTCTTTGTCCAGCCTTGCTCGGTACTCACTGTTTGATAAGCGTTTCACCAACGGTTCTCCTTTTGCGAAATTTCCCTTTATCGGGATTGAAATCTGCTTCATCGCGAAATCTGGGCGTTTTCCCTTTTTTTTTTCTAAATTTAATGTCACCTGATTACCTTTCTGGGCTTGGGCCTCTGCCGCAGCTGGCCCACGACTTCGCCAATCATTTAGGGCCAACTTTATGGCCAAATCACGATCGCTGACCATTTGGGCTTCCCGCATACAAGCTTCTAACGTCACTGGGTGACGACCTTTAACTTCCGCTTGCAGATTGGTTTCCAACCCTATGATGAACGCGTCAATGAGTACGCTCTCTGCCATTTCTGGCAATGGTGCCGAATACTCCAAAAACTTCTTCAAGTAATCAGCGTACAAGCCGTCCTGCTTAATCCGTATGTGACGGGCCTCCAAACTACCTTCCTCGGGGGCCTTGAAGTGTTTGAACATCCTCCTCTTGAGGTCTTCCCACGACATCACCTTCTTTCGATTATTACTCCAGCGAAACCAATTCACTGTGTCCTCACCAAAACTGACTATTGCGACCTTCACTTTCTCTTCATCAGCCAGCTCATTGATGTCGAAATTGTGTTCGGCTTGATAAGTCCATGATTCCGGGTTCTCTCCACTAAATACAGGTATCTTTAGTTTCTTGTACTTGCTTTTGTCTGAGGACCCTTTGGCGAAACCCAATGTCATGTCTGTCTCTCCGATTTTTACCTTCCCTTTCGGTCCAAACCCATTTGAGGCACACGATTCCTCCCTCAGTTTTGCACGACTACTTTCCTTAACCTTCTCTGACAGATTCTCCATGCTCTTAAGAATACTGAGCATCATTCCCTTCAACTCTTTGATTTCCTTCTCATTCATATCCAATCTATCCTCCCACTCTTTTTGAGCCATAGCTCGTGTCTTCCCCAGGATGTTTGTGGCTTTGATACCACTTTGTTAATACTCTTTCCCTGCACTCAAAAAAACCCAAAACAATGCAAAGAAACAGAGGCAGCACTCTATGGATCTTTATTTGTATAACAGGGAGCGTTCATAGTGAAAGATTAACAAAACAAAAAGGAAATAACAACAAACAGAGAATAATAGAAGAAAAACAAGCTTAATATTCTCCAACAATTCGAGAAGCTGGTGTCTCCCTAAAAGTCTCCCCAATAGCTTTTCATACCAAAAAACAAGATGCCTCACCAATCCCTAAAACATTCCTTAAATACCTCTTTTCCTCCGGTGGGACCCTCTTATCCAAAATATTCTTTATTTACTTTTTCTCAATTCTTTTCCTAAGCCGGGTTGTCTACGTAGGTATTCTTTTTTCTCTCCCTATGCTTGTAGGTATATATGATAGGGGGAATCACACAATCATAAGTTCTAATTCCTATACCCATCTCGATTTACAACATCATACATGCTATATTGTGTACTCATATATAAATATATTCAGTTTGTTCTGTGGCGAAGCTTAACATAAAATAAGATAGTAAAACACAAAATACTTTAGATCTCGTGTTTAAGGGGAAGTAAATTTGAACTGAAGAGTGCTCTCCCAATGAAAGTTTTACGCAATAAAAACACTGCTTTGTTGTAATGTTTTTCCAAGAAAGTGCAAAAGGGGAATTAATTTGCTATTAGAGGGTCACGAGTAAGACATTTACAATTTTGGTAGGTTACTTGAGCTTACGTTCAAGTTTGAACTTCTGTGGCTAAGGACTCGTTTATGCATTATTTCTCATTCTTTTAAATTGATATTTTTCCATTTGAGGGCTATTTTGTCTTCTTTATTGTTATGTATATTATTTTATTTATTCTCGATCAAAGTAGGCCTTTTTCATTTTTCTTTGATCAGTAACCAAGCTTATTGAAGAAAACAATGAAGGAATACAAATGCATTCAAGGAAAAATAGAGCTCACTCCTTTTGAGACTTTAGCAAATGCTAGAATTTTTCATAGTCTTGAAACTAACATGGATGCTTTTGGAGATTTATTCACACTTTTTGCTTCTACTTGGTACTCTTGTTCAAAATTCTTTTTGTAATTATAGTCTAACTTTGGTGTTCCACAGTTGCAATTTTTTTTAATACATATATATAAATATAGAAGATGCAAGCTGAGTGTTCCTTTTGATTTCTTTTTTGTTTCCAGGTATCTCGCTATCCTTGGATCAGGTTTGCACCTATATTATTTTAATTTTTTTCCTTTTCCTTTTTTGTTTTAGGAAAAAAAAAAAGAATAATCTTCTGCTTTCTATAATGGCGGTCTTCTGCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAGAACTCGTCAGGAGATTAA

mRNA sequence

ATGTCTGCAAGCGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGTCTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGAAAGGTATCTCGCTATCCTTGGATCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAGAACTCGTCAGGAGATTAA

Coding sequence (CDS)

ATGTCTGCAAGCGGAAAGCGAAAGGACGACGAAGATCGCGTATCCGAAGGAGATGCTCCTCCTTCTAAAACATTCAGGAAAGATCCTGACGATGCCGATGAAATCGTCGTCTGCGAGCTTTCAAAGAACCGTAGGGTTATGGTCAGGAAATGGCAAGGAAAGATTGTCGTCGATATTCGCGAGTTTTATGTCAAAGATGGCAAGCAGATGCCTGGAAAGAAAGGTATCTCGCTATCCTTGGATCAGTGGAACGTTCTCCTAAATCATGTAGAAGAAATTGACAAGGCTGTTAATGAGAACTCGTCAGGAGATTAA

Protein sequence

MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD
Homology
[Close]
BLAST of IVF0004726 vs. ExPASy Swiss-Prot
Match: O65154 (RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana OX=3702 GN=KIWI PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.8e-28
Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGK 60
           MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GK
Sbjct: 1   MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query: 61  IVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENS 102
           I +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+KA+++ S
Sbjct: 61  IWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDLS 107

[Close]
BLAST of IVF0004726 vs. ExPASy Swiss-Prot
Match: O65155 (RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana OX=3702 GN=KELP PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.8e-12
Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 8   KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDG 67
           K++ED    GD    K   K+ DD  ++++C LS  RRV +++++GK +V IRE+Y KDG
Sbjct: 74  KEEED----GDKDCGKG-NKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDG 133

Query: 68  KQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS 103
           K++P  KGISL+ +QW+    ++  I+ AV +  S
Sbjct: 134 KELPTSKGISLTDEQWSTFKKNMPAIENAVKKMES 163

[Close]
BLAST of IVF0004726 vs. ExPASy Swiss-Prot
Match: Q9VLR5 (RNA polymerase II transcriptional coactivator OS=Drosophila melanogaster OX=7227 GN=Ssb-c31a PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.4e-10
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0 

Query: 8   KDDEDRVSEGDAPPSKTFRKDPDDADE--IVVCELSKNRRVMVRKWQGKIVVDIREFYVK 67
           K    +  E DAP S     DP D+ E       L   R+V + +++G+  VDIREFY K
Sbjct: 22  KPASKKAKESDAPNS-----DPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYDK 81

Query: 68  DGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV 98
            G+ +PGKKGISLSL QW  LL   EE+ +A+
Sbjct: 82  GGQILPGKKGISLSLIQWKKLLEVAEEVTRAI 108

[Close]
BLAST of IVF0004726 vs. ExPASy Swiss-Prot
Match: P11031 (Activated RNA polymerase II transcriptional coactivator p15 OS=Mus musculus OX=10090 GN=Sub1 PE=1 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 27/62 (43.55%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 39  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV 98
           ++ K R V VR ++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV
Sbjct: 65  QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 124

Query: 99  NE 100
            +
Sbjct: 125 RK 126

[Close]
BLAST of IVF0004726 vs. ExPASy Swiss-Prot
Match: Q63396 (Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus OX=10116 GN=Sub1 PE=1 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 27/62 (43.55%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 39  ELSKNRRVMVRKWQGKIVVDIREFYV-KDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAV 98
           ++ K R V VR ++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L   + +ID AV
Sbjct: 65  QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLNMEQWSQLKEQISDIDDAV 124

Query: 99  NE 100
            +
Sbjct: 125 RK 126

[Close]
BLAST of IVF0004726 vs. ExPASy TrEMBL
Match: A0A1S3B4K6 (RNA polymerase II transcriptional coactivator KIWI isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486087 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.0e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR
Sbjct: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 105
           EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104

[Close]
BLAST of IVF0004726 vs. ExPASy TrEMBL
Match: A0A0A0L2F1 (PC4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496770 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47
Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 105
           EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104

[Close]
BLAST of IVF0004726 vs. ExPASy TrEMBL
Match: A0A6J1EYI2 (RNA polymerase II transcriptional coactivator KIWI-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439635 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.7e-44
Identity = 92/104 (88.46%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSA GKRKDDED V EGDAPP KTFRKD D+ DEIVVCE+SKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSARGKRKDDEDHVYEGDAPPKKTFRKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 105
           EFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNENS GD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLRNHVDEIDKAVNENSLGD 104

[Close]
BLAST of IVF0004726 vs. ExPASy TrEMBL
Match: A0A6J1IRG1 (RNA polymerase II transcriptional coactivator KIWI-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478052 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSA GKR+DDED VSEGDAPP KTFRKD D+ DEIVVCE+SKNR+V+VR WQGKIVVDIR
Sbjct: 1   MSARGKRRDDEDHVSEGDAPPKKTFRKDSDETDEIVVCEISKNRKVIVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 105
           EFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAV+ENS GD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLRNHVDEIDKAVDENSLGD 104

[Close]
BLAST of IVF0004726 vs. ExPASy TrEMBL
Match: A0A6J1HRT2 (RNA polymerase II transcriptional coactivator KIWI-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466134 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 87/101 (86.14%), Postives = 92/101 (91.09%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSA GKRKDDED  SEGDAPP KTF+KD ++ DEIVVCE+SKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSARGKRKDDEDHASEGDAPPKKTFKKDSEETDEIVVCEISKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENS 102
           EFYVKDGK+MPGKKG SLSLDQWNVL NHVEEIDKAVNENS
Sbjct: 61  EFYVKDGKEMPGKKGFSLSLDQWNVLRNHVEEIDKAVNENS 101

[Close]
BLAST of IVF0004726 vs. NCBI nr
Match: XP_008442140.1 (PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis melo])

HSP 1 Score: 207 bits (528), Expect = 1.71e-67
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR
Sbjct: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104
           EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104

[Close]
BLAST of IVF0004726 vs. NCBI nr
Match: XP_004146395.1 (RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis sativus] >KGN54787.1 hypothetical protein Csa_012558 [Cucumis sativus])

HSP 1 Score: 194 bits (494), Expect = 2.63e-62
Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSASGKRK DED VSEGDAPPSKTF+KD DD DEIVVCELSKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSASGKRKGDEDDVSEGDAPPSKTFKKDSDDTDEIVVCELSKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104
           EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104

[Close]
BLAST of IVF0004726 vs. NCBI nr
Match: XP_038881105.1 (RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Benincasa hispida])

HSP 1 Score: 190 bits (482), Expect = 1.78e-60
Identity = 94/104 (90.38%), Postives = 97/104 (93.27%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSA GKRKD+ED  SEGDAPPSKTF+KD DD DEIVVCE+SKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSARGKRKDEEDHASEGDAPPSKTFKKDSDDTDEIVVCEISKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104
           EFYVKDGKQMPGKKGISLSLDQWNVL NHVEEIDKAVNENSSGD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLRNHVEEIDKAVNENSSGD 104

[Close]
BLAST of IVF0004726 vs. NCBI nr
Match: XP_023543027.1 (RNA polymerase II transcriptional coactivator KIWI-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186 bits (472), Expect = 5.98e-59
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSA GKRK+DED VSEGDAPP KTFRKD D+ DEIVVCE+SKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSARGKRKEDEDHVSEGDAPPKKTFRKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104
           EFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNENS GD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLRNHVDEIDKAVNENSLGD 104

[Close]
BLAST of IVF0004726 vs. NCBI nr
Match: XP_022932999.1 (RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 185 bits (470), Expect = 1.21e-58
Identity = 92/104 (88.46%), Postives = 95/104 (91.35%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIR 60
           MSA GKRKDDED V EGDAPP KTFRKD D+ DEIVVCE+SKNRRVMVR WQGKIVVDIR
Sbjct: 1   MSARGKRKDDEDHVYEGDAPPKKTFRKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIR 60

Query: 61  EFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSSGD 104
           EFYVKDGKQMPGKKGISLSLDQWNVL NHV+EIDKAVNENS GD
Sbjct: 61  EFYVKDGKQMPGKKGISLSLDQWNVLRNHVDEIDKAVNENSLGD 104

[Close]
BLAST of IVF0004726 vs. TAIR 10
Match: AT5G09250.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 124.0 bits (310), Expect = 7.0e-29
Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGK 60
           MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GK
Sbjct: 1   MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query: 61  IVVDIREFYVKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENS 102
           I +DIREFYVKDGK +PGKKGISLS+DQWN L NH E+I+KA+++ S
Sbjct: 61  IWIDIREFYVKDGKTLPGKKGISLSVDQWNTLRNHAEDIEKALSDLS 107

[Close]
BLAST of IVF0004726 vs. TAIR 10
Match: AT5G09240.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 97.1 bits (240), Expect = 9.1e-21
Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGK 60
           MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+
Sbjct: 1   MSENGKRKDEDVRASDDRDESETHAPPKKV-AKPADEIEDIFICNLDKNRRVFVRNCNGR 60

Query: 61  IVVDIREFYVKDGKQMP--GKKGISLSLDQWNVLLNHVEEIDKAVNENS 102
           I + IR+F+VKDG  +P   K+GISLSL+QWN L NH E+IDKA++E S
Sbjct: 61  IWIAIRQFFVKDGITLPCNSKQGISLSLEQWNDLRNHEEDIDKALSELS 108

[Close]
BLAST of IVF0004726 vs. TAIR 10
Match: AT5G09250.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 89.7 bits (221), Expect = 1.5e-18
Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 0 

Query: 1  MSASGKRKDDEDRVSEGDA---PPSKTFRK---DPDDADEIVVCELSKNRRVMVRKWQGK 60
          MS+ GKRKD++ R S+ ++    P+K   K   D D +D+IVVC +SKNRRV VR W GK
Sbjct: 1  MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60

Query: 61 IVVDIREFYVKDGKQMPGKKG 76
          I +DIREFYVKDGK +PGKKG
Sbjct: 61 IWIDIREFYVKDGKTLPGKKG 81

[Close]
BLAST of IVF0004726 vs. TAIR 10
Match: AT5G09240.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 82.0 bits (201), Expect = 3.0e-16
Identity = 56/137 (40.88%), Postives = 73/137 (53.28%), Query Frame = 0 

Query: 1   MSASGKRKDDEDRV------SEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGK 60
           MS +GKRKD++ R       SE  APP K   K  D+ ++I +C L KNRRV VR   G+
Sbjct: 1   MSENGKRKDEDVRASDDRDESETHAPPKKV-AKPADEIEDIFICNLDKNRRVFVRNCNGR 60

Query: 61  IVVDIREFYVKDGKQMP--GKKGISLSLD----------------------------QWN 102
           I + IR+F+VKDG  +P   K+GISLSL+                            QWN
Sbjct: 61  IWIAIRQFFVKDGITLPCNSKQGISLSLEQVFTSLFHCLCLPHVHMSCLLHETFFLMQWN 120

[Close]
BLAST of IVF0004726 vs. TAIR 10
Match: AT4G10920.1 (transcriptional coactivator p15 (PC4) family protein (KELP) )

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-13
Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 0 

Query: 8   KDDEDRVSEGDAPPSKTFRKDPDDADEIVVCELSKNRRVMVRKWQGKIVVDIREFYVKDG 67
           K++ED    GD    K   K+ DD  ++++C LS  RRV +++++GK +V IRE+Y KDG
Sbjct: 74  KEEED----GDKDCGKG-NKEFDDDGDLIICRLSDKRRVTIQEFKGKSLVSIREYYKKDG 133

Query: 68  KQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENSS 103
           K++P  KGISL+ +QW+    ++  I+ AV +  S
Sbjct: 134 KELPTSKGISLTDEQWSTFKKNMPAIENAVKKMES 163

The following BLAST results are available for this feature:
BLAST of IVF0004726 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O651549.8e-2858.88RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana OX=37... [more]
O651555.8e-1240.00RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana OX=37... [more]
Q9VLR55.4e-1043.48RNA polymerase II transcriptional coactivator OS=Drosophila melanogaster OX=7227... [more]
P110313.5e-0943.55Activated RNA polymerase II transcriptional coactivator p15 OS=Mus musculus OX=1... [more]
Q633963.5e-0943.55Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus... [more]
BLAST of IVF0004726 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B4K65.0e-51100.00RNA polymerase II transcriptional coactivator KIWI isoform X1 OS=Cucumis melo OX... [more]
A0A0A0L2F14.4e-4794.23PC4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496770 PE=3 SV... [more]
A0A6J1EYI22.7e-4488.46RNA polymerase II transcriptional coactivator KIWI-like isoform X1 OS=Cucurbita ... [more]
A0A6J1IRG13.0e-4385.58RNA polymerase II transcriptional coactivator KIWI-like isoform X1 OS=Cucurbita ... [more]
A0A6J1HRT24.3e-4286.14RNA polymerase II transcriptional coactivator KIWI-like isoform X1 OS=Cucurbita ... [more]
BLAST of IVF0004726 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442140.11.71e-67100.00PREDICTED: RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumi... [more]
XP_004146395.12.63e-6294.23RNA polymerase II transcriptional coactivator KIWI isoform X1 [Cucumis sativus] ... [more]
XP_038881105.11.78e-6090.38RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Benincasa hi... [more]
XP_023543027.15.98e-5988.46RNA polymerase II transcriptional coactivator KIWI-like isoform X2 [Cucurbita pe... [more]
XP_022932999.11.21e-5888.46RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita mo... [more]
BLAST of IVF0004726 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09250.17.0e-2958.88ssDNA-binding transcriptional regulator [more]
AT5G09240.19.1e-2151.38ssDNA-binding transcriptional regulator [more]
AT5G09250.21.5e-1858.02ssDNA-binding transcriptional regulator [more]
AT5G09240.23.0e-1640.88ssDNA-binding transcriptional regulator [more]
AT4G10920.14.1e-1340.00transcriptional coactivator p15 (PC4) family protein (KELP) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10Transcriptional Coactivator Pc4; Chain Acoord: 28..102
e-value: 5.3E-28
score: 98.4
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 37..98
IPR003173Transcriptional coactivator p15 (PC4), C-terminalPFAMPF02229PC4coord: 38..88
e-value: 4.6E-24
score: 83.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
IPR045125RNA polymerase II transcriptional coactivator Sub1/Tcp4-likePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 7..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004726.2IVF0004726.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0060261 positive regulation of transcription initiation from RNA polymerase II promoter
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription regulator complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003713 transcription coactivator activity