IVF0004718 (gene) Melon (IVF77) v1

Overview


Name	IVF0004718
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	30S ribosomal protein S1
Location	chr07: 22445825 .. 22451651 (+)
RNA-Seq Expression	IVF0004718
Synteny	IVF0004718

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATGCGTCACGCAAATAAGCGATGGGTTCCCATTCGGATTTGCAGCAGTTGGTGGCATTCCATATCCGAATCCTTTCCCATTACGCTCCTCCCCGCCATTGTCTTCCCTCTTTCCATTCCCATAATCATGCCAATCTTTCTTGCAACCATCGCCTCTGTCTCTACTCATTCCTTCCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAATCCCCCTCTAAACGCCCTTCCATTTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTGGACACCTCCCCGGAATCCGTTCGACGTGCTCGGGTGAGTCACGTTCTTCTTCCCTTCTATCTATGTTGTTAACAACAGACTGGTCTGTTGTTAATTAGTTCGAGATACATGTTATCTTATATACCATACCATGTCGTAGCCCATAAAGCGTAAATGGGTATTTGATCTAATAAAAAAGAAATCGTTATCTACCAAAAGAGTCACCATGTGAGGGGCAAGTTAATAAGTACACATTGGAAAAATCAAGGAAAATCATGAACTACTCCTTTTATTGCCAATTGGTTTTTTTTGATATGGAACCAGCTTGTTATTAAAAACTATAAGGCTTATTCGTCATAGATTTTAATGAACATTTTACTGCTGGCCAAGTATAGGGTGGTGGGAGCGAAGAGGAATTGACATATCTTAGTTACAATTACAACTAAGTGAGAACTAGCATAATGATTTTAGAAGAAATTGTAAAGCACCATCATGCTGTGTTATTATGGAAGGCTAGATAGAAGCTCATTGGCCTATAAAAATTGGCTTCTTATCCGAAAAATTGGTGCACACGACCTGAGGAGAATATCTCTACATAAGGGATTTGAATGATGCAGTTATATAACAAACATAACATGTGTGACAAAATAATATATGCAAGAAATTACTGATATACTTACTTTGCTATTACAAACACAAGGAAATATTAAAGGAATGGTAGGATAAAAGAAGTGCTGCATTCCATAAAACATTGAAGTTTATTCTTTGTAGATTGAGTTGCCAAGATCCAGCAGTGATCGAAAATGCTGCTCATTAATAGTTTAAAACATTTGTACTGATATTGGGCATGTTTAATTAGGAATTTGCTAGAACGAATTCAGTTTATGCTTAGCCTGAGTTTCTATTACTTTCGTATAACTCTTGTAATCTAATACTTGGTTTCTGCAAAGAAGTAGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGCAGGATCGAAGGTTCAAATGCTGGAGGCTTACTTGTCCGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGTCCGTCTCATTCTTGTAAAGGTACAAGTTTTTTTAATGCTATACTTTAAAATTTTTCATTAAGTTGCCTTGACAACATGTCCCATATTTTACTTTTATCCAGAGTAGGTCCTGAATTAAGATTAGTAAAAAAATTATGCTTCCCTTTTTACGTGGTCATTTCTTGGGTTAAATTCTATGGAGAGAAAGTCAGCAGTTTACCTAATGATGACTTAAATTTCTTGAGGTAGATGTGTTTCAAACTTTTAACATGATTCCTCCCTGCGCTTGCCTTCTGAATTTCTTGCAGAACCAAACAAGAGTATTCAAGATATTGCAAAAAGCTTAACTGGTTCGCTTATATCAGTAAAGGTAGTTAGCTTCTATGGTTGTCCGTAATTCTAATCATTTATAGTTCTGAAAGCTTCTCTTTTAGTTAGCTGAAGACTGGTATACCTCTATATATTTGGTCACTCCCTAGGTTTACTGCTGAAAGAAAGTAGGAGACTTGGATATTTGTTTCTTTAATTTCTTGATTTGTTGGATACACCTAAAATAAGGAGTTGAATTATAGATGGTTTGATAATGTACACACTCAGTCACATCCCAAACACCAACTTTTGTCTTGGAGGAAGCAAAGTTCTCTACAACCATGAATCTCTTTTGAGGGTTGCTTTATTTATTGTTTTTCTTTTCTATCTTTCTTTCTTTCTTTCTGTCTCCATTTTTTTCTTTAAAAAAAAAAAAGATTATAAGAAACGATCATTGTATTTAACCGAAAGCAAGACAGCCTAGGGGTTGGAGGAAGAGGAATCCCCTGAATAACAAACTTACAAAAGTGCAGTGCCCACTGTCACTGTCTCTATCACTAATAATCATGAAGCAGATGAAGTCACAAAATAGTTTTTATGGTTTTTACACAAGCAAGAGGTTGTACGTTGTACATTATTACATCCGCTGAGGATGATTTCCTTAAACAATTCTCTGATTTCTCTCTTTCCAAATAAACTATGAGGAATAGGAAAAAAAAAAAAAAAACTAAAGAGTAGGTCCGATAGTTCACTTCCATAAGATTCTAGCTTTTCCTTTGAAAAAACCCAGATATAAATACTTTCATTTAGCCATACATCCACAGAAACTGGGAGGGAGATAGCAAGTTAAAATGGTAGAAAATAAAGCTCCACATTTTCTAACCAAAATATAGCAGCAGAAGAAAAACGGTCCAGTGATTTCTTGTCTCTAAAGCAAAGGCAAATGGAAGGAGAAAGACTCCAGTGAGGAAACTTTCTCTGAACTCCGTCTTCGGTGTTTGGGCTCCTGTTTAACAAAGACCAAGTGAAGATCTTTACTTTCTTGGGGACTTCAAAGTTGGAAACTTTGTCCATTTCTCGAACTCTGAACGCCGGCCTTGGTTTGGTGAGATGGACTAAGGCTGATTTAACAGAGAGCTCCGGACGACGCCATCAAAGCCCCTCTCAAATTGGACGGACTCAAGTTCACGGCCCATCATGATAATTCCCTGTCAAACAGTTTTCTACAAATACCTTAGTTCCACATCAGCTTTGAGCCTTGCAACCCAGCAATCAGCAATCCGCAATAGAAGCCCCCTTTTTAGACCAGAGGCCATAGAAGTCAGGAAAAACAGAGGATAAAGAGATTTTGCCCACCCCAAGAGTCTTCCCAAAAACATATGTGATGCCTGTTGGCCACCTTAACTGAACAAAATCCAATAACCACTTTAGAAAATGATCACTCTCCCCACCCTGCTTATTAGGTTTATCGAGAGAAAATATCCCATTCTGCATAGTGTGCACTTTGGAAATTGAACTATGGGATGACATATCCCTGCTTATTAGGTTCAGAACCTGTTGAATATAAATTCAGCTGATCCAATTTAGGTCCAAAATAAATTTTATCATCATGGTCAGTGAAGAGAGTAAAACATATGGATCATGTGGAGAGCAGTGCCATATTTTGATTTTTCATAAAGTGAAATGGGAGTTGTAATATAATTGTTTATGATGGAAATTAGGGGAAAATTAGGAGTCTCTTCCATGTGGGTGGGCTAGTTCTTTCATCATTCATATTAACATTTAACCATCTTTGCTTGTGAAATATTTAAGTAAGAATATGTTAAACCCTGCCATTTCTTGTTTTCAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTACGTGGTCAAAGTTTTCTGGGCAAGTGGGTGTGGGAGATGTCTATGAAGCTAAAGTTGGATCTCTGGAGGATTATGGTGCTTTTGTACATCTACGTTTCTCTGATGGTAATATTTTGTTTCCTATTAATCTTATCTGCTGACGCTGATGTATTTAGAAATCAATGGCCACTTATTTTCCCAAATTCTGCAGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGCAAGTGTTCTCAGATTCCTTCTTGTTACCGACTAATTTGCTATTTGCATTTTCTAGGAAACATCTGTTATTTTTAGTATTTTCAATTATTATGTAGTAGATTTATCTCTTTTTTCTATTATTTACTTATTTTGCATGGACCTCATGAAATTTGTTAGGTTCAGGGTTTTGGTTATGTTGGATAGGGAAGTCGGTTAGGAAGTAGGTGGAATTGTAGAAAGTGGGAAATTAGAGTCACAAGGATAGGTGAAGATTCTCATAAATCCCTCCCCATTTTTTAACAATTATTACTTTTATTATGATTATTTACCAATAATCCCCACTCCATATTAAGAATCAGATTGCTTCTGATTCTCAACGAAATACAATCTGTTTTACTTTGATTATGCAATTTCTGAATTTAGAAACAGGAGTCATTTGAATTGTAATTTTCGCACAAGGTTAAGAAATGGAAAACGAGAAAAATGTGATAGACTTACTAAATTTATATCATCTCAAACTTTTAGTCCACGATCTTTGCCATGCATTTCAGCATTGGGATGCTGAATTTGTCTTATCGGTTTCACGCAGGGATAAGTCTAGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGTTTGTAAAACATTATTGTACGCATTTAGTCAACCTTTTCAACTACTCTCATCTCCTAACCAAGCTTTAGCTATATGATGAACGTCATAATTAACAGGACAGTTCTGCTGAACCTGATTCTTTCGGACCTAAAAGCGACAGCGAAATAATACCCCTCCCTGGACTTGGAACAATAATTGAAGAGCTACAGCAGGAAGAGGGGTATGTTACTATTTTTAGTTTGACATATTGAGGGTCATTTCTGAAAAGCTTTGAAAGTAACACGAGCACTGTCTTTAAAGATTACTGATAACAACAATGTATCAGCATCAACAGTAATAAATATGCTGTGGCTTGTTCTGAAATCAATAGCTAATATTCTAGTGATATTTGGACATGTGCAATTTTATGGACATGCTAAATTTCCATAAGCACGGACGAAGTAATTTTACACATACAAACAAGGAGATGTGACAACTAACTCAAAAGATCTTCTTTTTAACTTTCGCGCATACTTTCACTCCATGGATTACCCTTGTTGGGGTTTTAGTCATCGGTGGAGATCATATTATGAGTTCGTGGCTTCTCAAGTTATCTTGACCATGAGTTACAATATGATCTTAATTTGGCTAGTTTGAATATCAGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCGAATGTAAGTTGGTTTTGTTCCTATGAATATGATGTGGGGTTTCGTCATTGGCTTCACTTTTTCGCCTCTCATCTCATTGCTACTGTAGGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTAATCGTCTCTCCTCACACACAACAGAAACACATGCAACAGATACTAATCCATTATGTGTGTGAATTTAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAGAGGGCATTGCAGCGAGTGTTGGAACGTGTCCCATGATTTCGGAAACAAAGTTCGTTTTTGTTCGATTTTGTATGAAGTTTTCTGTAAAGAAGATGATGCCAACTCAATTGTTTCCAGTAAGTTGTATATTTTGTCTGATCTCTACATCTATTCTAATGGTAAAAGTAAAAGGTGTTGTAAGCATGAATGCTCGATCCTCGTATAACAACAGCCTTCTGCTTGGAAGACTTGTAGTTTTTGCTTTTCGTAGTCAATATTATATATATGTATGTATGTACATATTCTTTGTTTCATTGAATTCAAAGA

mRNA sequence

GTTTATGCGTCACGCAAATAAGCGATGGGTTCCCATTCGGATTTGCAGCAGTTGGTGGCATTCCATATCCGAATCCTTTCCCATTACGCTCCTCCCCGCCATTGTCTTCCCTCTTTCCATTCCCATAATCATGCCAATCTTTCTTGCAACCATCGCCTCTGTCTCTACTCATTCCTTCCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAATCCCCCTCTAAACGCCCTTCCATTTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTGGACACCTCCCCGGAATCCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGCAGGATCGAAGGTTCAAATGCTGGAGGCTTACTTGTCCGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGTCCGTCTCATTCTTGTAAAGAACCAAACAAGAGTATTCAAGATATTGCAAAAAGCTTAACTGGTTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTACGTGGTCAAAGTTTTCTGGGCAAGTGGGTGTGGGAGATGTCTATGAAGCTAAAGTTGGATCTCTGGAGGATTATGGTGCTTTTGTACATCTACGTTTCTCTGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGGATAAGTCTAGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGACAGTTCTGCTGAACCTGATTCTTTCGGACCTAAAAGCGACAGCGAAATAATACCCCTCCCTGGACTTGGAACAATAATTGAAGAGCTACAGCAGGAAGAGGGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCGAATGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAGAGGGCATTGCAGCGAGTGTTGGAACGTGTCCCATGATTTCGGAAACAAAGTTCGTTTTTGTTCGATTTTGTATGAAGTTTTCTGTAAAGAAGATGATGCCAACTCAATTGTTTCCAGTAAGTTGTATATTTTGTCTGATCTCTACATCTATTCTAATGGTAAAAGTAAAAGGTGTTGTAAGCATGAATGCTCGATCCTCGTATAACAACAGCCTTCTGCTTGGAAGACTTGTAGTTTTTGCTTTTCGTAGTCAATATTATATATATGTATGTATGTACATATTCTTTGTTTCATTGAATTCAAAGA

Coding sequence (CDS)

ATGCGTCACGCAAATAAGCGATGGGTTCCCATTCGGATTTGCAGCAGTTGGTGGCATTCCATATCCGAATCCTTTCCCATTACGCTCCTCCCCGCCATTGTCTTCCCTCTTTCCATTCCCATAATCATGCCAATCTTTCTTGCAACCATCGCCTCTGTCTCTACTCATTCCTTCCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAATCCCCCTCTAAACGCCCTTCCATTTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTGGACACCTCCCCGGAATCCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGCAGGATCGAAGGTTCAAATGCTGGAGGCTTACTTGTCCGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGTCCGTCTCATTCTTGTAAAGAACCAAACAAGAGTATTCAAGATATTGCAAAAAGCTTAACTGGTTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTACGTGGTCAAAGTTTTCTGGGCAAGTGGGTGTGGGAGATGTCTATGAAGCTAAAGTTGGATCTCTGGAGGATTATGGTGCTTTTGTACATCTACGTTTCTCTGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGGATAAGTCTAGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGACAGTTCTGCTGAACCTGATTCTTTCGGACCTAAAAGCGACAGCGAAATAATACCCCTCCCTGGACTTGGAACAATAATTGAAGAGCTACAGCAGGAAGAGGGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCGAATGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATTCAGCTGACAACATCACTCGATCAGGAAGGTATAAAGAGGGCATTGCAGCGAGTGTTGGAACGTGTCCCATGA

Protein sequence

MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP

Homology

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BLAST of IVF0004718 vs. ExPASy Swiss-Prot
Match: P29344 (30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-21
Identity = 59/190 (31.05%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 115 SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 174
           S+R+ +    W+  R+      + +G+I G+N GG++     L GF+PF Q+S   S +E
Sbjct: 164 SLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEE 223

Query: 175 PNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSL 234
                      L    I +K ++ DE   +L+ S ++A  +    Q+G+G V    V SL
Sbjct: 224 -----------LLEKEIPLKFVEVDEEQSRLVMSNRKA-MADSQAQLGIGSVVTGTVQSL 283

Query: 235 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRIT 294
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ DR++ R++
Sbjct: 284 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVS 335

Query: 295 LSIRQLEEDP 305
           LS ++LE  P
Sbjct: 344 LSTKKLEPTP 335

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BLAST of IVF0004718 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.3e-21
Identity = 60/190 (31.58%), Postives = 100/190 (52.63%), Query Frame = 0


Query: 115 SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 174
           S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E
Sbjct: 167 SLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEE 226

Query: 175 PNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSL 234
                      L    I +K ++ DE   KL+ S ++A  +    Q+G+G V    V SL
Sbjct: 227 -----------LLEKEIPLKFVEVDEEQTKLVLSNRKAV-ADSQAQLGIGSVVLGVVQSL 286

Query: 235 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRIT 294
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ DRD+ R++
Sbjct: 287 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVS 338

Query: 295 LSIRQLEEDP 305
           LS ++LE  P
Sbjct: 347 LSTKKLEPTP 338

[Close]

BLAST of IVF0004718 vs. ExPASy Swiss-Prot
Match: Q9JZ44 (30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rpsA PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.6e-18
Identity = 76/247 (30.77%), Postives = 118/247 (47.77%), Query Frame = 0


Query: 115 SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 174
           S  +A+R+ADW A  E +++G I  G I G   GGL V   S+  FLP   +        
Sbjct: 86  SREKAKRAADWIALEEAMENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDV------ 145

Query: 175 PNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEK---EATWSK----FSGQVGVGDVY 234
             + ++D      G  I  KVI+ D++   ++ S +   EAT  +        +  G V 
Sbjct: 146 --RPVKD-TSHFEGKEIEFKVIKLDKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVI 205

Query: 235 EAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVD 294
           +  V ++ DYGAFV L   DGL H+T      +++W  V+   ++L  G EV  KV+  D
Sbjct: 206 KGIVKNITDYGAFVDLGGIDGLLHIT------DLAWRRVKHPSEVLEVGQEVEAKVLKFD 265

Query: 295 RDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQ 354
           ++K R++L ++QL EDP    L +  PQ         G +   ++  L   G  +E  Q 
Sbjct: 266 QEKQRVSLGMKQLGEDP-WSGLTRRYPQ---------GTRLFGKVSNLTDYGAFVEIEQG 307

[Close]

BLAST of IVF0004718 vs. ExPASy Swiss-Prot
Match: P74142 (30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rps1b PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-18
Identity = 59/201 (29.35%), Postives = 105/201 (52.24%), Query Frame = 0


Query: 115 SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 174
           S R+ +    W+   E  +SG   E  + G+N GG++     L GF+P      SH   +
Sbjct: 96  SRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVEGLRGFIP-----RSHLMHK 155

Query: 175 PNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSL 234
            N        +L G ++   +++A++ N KL+ +++    ++  G++  G++YE KV  +
Sbjct: 156 DNMD------ALVGQVLKAHILEANQDNNKLVLTQRRIQQAESMGKIAAGNIYEGKVAKI 215

Query: 235 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRIT 294
           + YG FV +        +TGL+HVS+VS   V  +  + + G  ++V V  +D  K+RI+
Sbjct: 216 QPYGVFVEIE------GVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQEIDEYKNRIS 275

Query: 295 LSIRQLEEDP--LLETLDKVI 314
           LS R LE  P  L+E  D+++
Sbjct: 276 LSTRILETYPGELVEKFDEMM 279

[Close]

BLAST of IVF0004718 vs. ExPASy Swiss-Prot
Match: P46228 (30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpsA PE=1 SV=4)

HSP 1 Score: 93.6 bits (231), Expect = 5.7e-18
Identity = 55/190 (28.95%), Postives = 95/190 (50.00%), Query Frame = 0


Query: 115 SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 174
           S+RR      W+  R+           +  +N GG LVR   L GF+P   +S +   KE
Sbjct: 99  SIRRIEYMRAWERVRQLQTEDATVRSEVFATNRGGALVRIEGLRGFIPGSHIS-TRKAKE 158

Query: 175 PNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSL 234
                      L G  + +K ++ DE   +L+ S + A   +   ++ VG+V    V  +
Sbjct: 159 ----------DLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGI 218

Query: 235 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRIT 294
           + YGAF+ +        ++GL+H+SE+S D ++    + +  DEV V +I++D ++ RI+
Sbjct: 219 KPYGAFIDIG------GVSGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRIS 271

Query: 295 LSIRQLEEDP 305
           LS +QLE +P
Sbjct: 279 LSTKQLEPEP 271

[Close]

BLAST of IVF0004718 vs. ExPASy TrEMBL
Match: A0A1S3BXL4 (30S ribosomal protein S1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494553 PE=4 SV=1)

HSP 1 Score: 800.4 bits (2066), Expect = 3.5e-228
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLS 60
           MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLS
Sbjct: 3   MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLS 62

Query: 61  LLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRAR 120
           LLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRAR
Sbjct: 63  LLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRAR 122

Query: 121 RSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQ 180
           RSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQ
Sbjct: 123 RSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQ 182

Query: 181 DIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAF 240
           DIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAF
Sbjct: 183 DIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAF 242

Query: 241 VHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQL 300
           VHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQL
Sbjct: 243 VHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQL 302

Query: 301 EEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQG 360
           EEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQG
Sbjct: 303 EEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQG 362

Query: 361 FEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 420
           FEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 363 FEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 422

[Close]

BLAST of IVF0004718 vs. ExPASy TrEMBL
Match: A0A5A7TNY0 (30S ribosomal protein S1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003280 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.6e-199
Identity = 378/381 (99.21%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 43  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 102
           MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP
Sbjct: 1   MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 60

Query: 103 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 162
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 120

Query: 163 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK-VIQADERNKKLIFSEKEATWSKFSGQV 222
           FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK VIQADERNKKLIFSEKEATWSKFSGQV
Sbjct: 121 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVVIQADERNKKLIFSEKEATWSKFSGQV 180

Query: 223 GVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTV 282
           GVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTV
Sbjct: 181 GVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTV 240

Query: 283 KVINVDR--DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG 342
           KVINVDR  DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
Sbjct: 241 KVINVDRQVDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG 300

Query: 343 TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL 402
           TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL
Sbjct: 301 TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL 360

Query: 403 TTSLDQEGIKRALQRVLERVP 421
           TTSLDQEGIKRALQRVLERVP
Sbjct: 361 TTSLDQEGIKRALQRVLERVP 381

[Close]

BLAST of IVF0004718 vs. ExPASy TrEMBL
Match: A0A0A0KTX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012510 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 3.6e-188
Identity = 355/378 (93.92%), Postives = 365/378 (96.56%), Query Frame = 0


Query: 43  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 102
           MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSS ILPLKSPSKR SIFPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 103 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 162
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSL+GFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120

Query: 163 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVG 222
           FPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV 
Sbjct: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180

Query: 223 VGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 282
           VGDVYE KVGS+EDYGAFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240

Query: 283 VINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII 342
           VINV+++KSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPK DSEIIPLPGL TII
Sbjct: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETII 300

Query: 343 EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTS 402
           EEL QEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTS
Sbjct: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360

Query: 403 LDQEGIKRALQRVLERVP 421
           LDQEGIKRALQRVLERVP
Sbjct: 361 LDQEGIKRALQRVLERVP 378

[Close]

BLAST of IVF0004718 vs. ExPASy TrEMBL
Match: A0A6J1GVD7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 OS=Cucurbita moschata OX=3662 GN=LOC111457527 PE=4 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.9e-175
Identity = 343/427 (80.33%), Postives = 372/427 (87.12%), Query Frame = 0


Query: 1   MRHANKRWVPIRICSSW---WHSISESFPITLLPAIVFPLSIPIIMPIFLA-TIASVSTH 60
           +RH N  ++PI   +     + + SE F   LLPAI FPL  P  MPIF A T+ S+S H
Sbjct: 3   LRHPNNGFLPIGFAAVRGFPFRAQSECFATALLPAISFPL-XPPNMPIFAATTLGSLSAH 62

Query: 61  SFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLD---TSP 120
           SFLSL AS   A +++S S+S +L  KSPSKRPS F +RVSLSGKP+PIAGVL+   +SP
Sbjct: 63  SFLSLSAS---ADASNSLSTSFLLTHKSPSKRPSNFAARVSLSGKPEPIAGVLESSPSSP 122

Query: 121 ESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCK 180
           ESVRRARRSADWK AREYLDSGFI++GRIEGSNAGGLLVRFYSL+GFLPFP LSP+HSCK
Sbjct: 123 ESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGFLPFPLLSPAHSCK 182

Query: 181 EPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGS 240
           EP KSIQDIAKSL GSLI VKVIQADE+NK LIFSEKEA WSKFS +VGVGDVYEA+VGS
Sbjct: 183 EPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFSEKVGVGDVYEARVGS 242

Query: 241 LEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRI 300
           LEDYGAFVHLRFSDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEV VKVI+VDRDKSRI
Sbjct: 243 LEDYGAFVHLRFSDGLYHLTGLVHISEVSWDLVQDVRDILSEGDEVRVKVIDVDRDKSRI 302

Query: 301 TLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVD 360
           TLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDSEIIPLPGL TI EEL QEEGI D
Sbjct: 303 TLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEGIED 362

Query: 361 VRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQ 420
           V +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQ
Sbjct: 363 VHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQ 422

[Close]

BLAST of IVF0004718 vs. ExPASy TrEMBL
Match: A0A6J1IUF3 (uncharacterized protein LOC111479406 OS=Cucurbita maxima OX=3661 GN=LOC111479406 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 6.7e-171
Identity = 329/382 (86.13%), Postives = 349/382 (91.36%), Query Frame = 0


Query: 43  MPIFLA-TIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGK 102
           MPIF A T+ S+S HSFLSLLAST DAS   S SSS +L  KSPSKRPS F +RVSLSGK
Sbjct: 1   MPIFAATTLGSLSAHSFLSLLAST-DAS--HSLSSSFVLTHKSPSKRPSNFAARVSLSGK 60

Query: 103 PDPIAGVLD---TSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLM 162
           P+PIAGVL+   +SPESVRRARRSADWK AREYLDSGFI++GRIEGSNAGGLLVRFYSL+
Sbjct: 61  PEPIAGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLV 120

Query: 163 GFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFS 222
           GFLPFP LSP+HSCKEP KSIQDIAKSL GSLI VKVIQADE+NK LIFSEKEA WSKFS
Sbjct: 121 GFLPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVKVIQADEKNKNLIFSEKEAAWSKFS 180

Query: 223 GQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDE 282
            QVGVGDVYEA+VGS+EDYGAFVHLRFSDG YHLTGLVH+SEVSWDLVQDVRDILSEGDE
Sbjct: 181 EQVGVGDVYEARVGSVEDYGAFVHLRFSDGFYHLTGLVHISEVSWDLVQDVRDILSEGDE 240

Query: 283 VTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGL 342
           V VKV++VDRDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDSEIIPLPGL
Sbjct: 241 VRVKVLDVDRDKSRITLSIKQLEEDPLLETLDKVIPQDDSAEPDSFGPKSDSEIIPLPGL 300

Query: 343 GTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQ 402
            TI EEL QEEGI DV +NRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQ
Sbjct: 301 DTIFEELLQEEGIEDVHINRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQ 360

Query: 403 LTTSLDQEGIKRALQRVLERVP 421
           LTTSLDQEGIKRALQRVLERVP
Sbjct: 361 LTTSLDQEGIKRALQRVLERVP 379

[Close]

BLAST of IVF0004718 vs. NCBI nr
Match: XP_008454000.1 (PREDICTED: 30S ribosomal protein S1 isoform X1 [Cucumis melo])

HSP 1 Score: 800 bits (2065), Expect = 2.97e-291
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0


Query: 1   MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLS 60
           MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLS
Sbjct: 3   MRHANKRWVPIRICSSWWHSISESFPITLLPAIVFPLSIPIIMPIFLATIASVSTHSFLS 62

Query: 61  LLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRAR 120
           LLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRAR
Sbjct: 63  LLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRAR 122

Query: 121 RSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQ 180
           RSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQ
Sbjct: 123 RSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQ 182

Query: 181 DIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAF 240
           DIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAF
Sbjct: 183 DIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAF 242

Query: 241 VHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQL 300
           VHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQL
Sbjct: 243 VHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQL 302

Query: 301 EEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQG 360
           EEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQG
Sbjct: 303 EEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQG 362

Query: 361 FEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 420
           FEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 363 FEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 422

[Close]

BLAST of IVF0004718 vs. NCBI nr
Match: KAA0044578.1 (30S ribosomal protein S1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 705 bits (1820), Expect = 1.36e-254
Identity = 378/381 (99.21%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 43  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 102
           MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP
Sbjct: 1   MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 60

Query: 103 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 162
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 120

Query: 163 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKV-IQADERNKKLIFSEKEATWSKFSGQV 222
           FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKV IQADERNKKLIFSEKEATWSKFSGQV
Sbjct: 121 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVVIQADERNKKLIFSEKEATWSKFSGQV 180

Query: 223 GVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTV 282
           GVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTV
Sbjct: 181 GVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTV 240

Query: 283 KVINVDR--DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG 342
           KVINVDR  DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
Sbjct: 241 KVINVDRQVDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG 300

Query: 343 TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL 402
           TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL
Sbjct: 301 TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL 360

Query: 403 TTSLDQEGIKRALQRVLERVP 420
           TTSLDQEGIKRALQRVLERVP
Sbjct: 361 TTSLDQEGIKRALQRVLERVP 381

[Close]

BLAST of IVF0004718 vs. NCBI nr
Match: XP_004152109.1 (uncharacterized protein LOC101213559 isoform X2 [Cucumis sativus] >KGN53055.1 hypothetical protein Csa_014442 [Cucumis sativus])

HSP 1 Score: 668 bits (1724), Expect = 5.11e-240
Identity = 355/378 (93.92%), Postives = 365/378 (96.56%), Query Frame = 0


Query: 43  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 102
           MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSS ILPLKSPSKR SIFPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 103 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 162
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSL+GFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120

Query: 163 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVG 222
           FPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV 
Sbjct: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180

Query: 223 VGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 282
           VGDVYE KVGS+EDYGAFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240

Query: 283 VINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII 342
           VINV+++KSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPK DSEIIPLPGL TII
Sbjct: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETII 300

Query: 343 EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTS 402
           EEL QEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTS
Sbjct: 301 EELLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTS 360

Query: 403 LDQEGIKRALQRVLERVP 420
           LDQEGIKRALQRVLERVP
Sbjct: 361 LDQEGIKRALQRVLERVP 378

[Close]

BLAST of IVF0004718 vs. NCBI nr
Match: XP_011653045.1 (uncharacterized protein LOC101213559 isoform X1 [Cucumis sativus])

HSP 1 Score: 662 bits (1709), Expect = 1.14e-237
Identity = 355/382 (92.93%), Postives = 365/382 (95.55%), Query Frame = 0


Query: 43  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 102
           MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSS ILPLKSPSKR SIFPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 103 DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLP 162
           DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSL+GFLP
Sbjct: 61  DPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLP 120

Query: 163 FPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVG 222
           FPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV 
Sbjct: 121 FPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVA 180

Query: 223 VGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 282
           VGDVYE KVGS+EDYGAFVHLR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK
Sbjct: 181 VGDVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 240

Query: 283 VINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII 342
           VINV+++KSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPK DSEIIPLPGL TII
Sbjct: 241 VINVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETII 300

Query: 343 EELQQEEG----IVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQ 402
           EEL QEEG    IVDVRVNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQ
Sbjct: 301 EELLQEEGLNISIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQ 360

Query: 403 LTTSLDQEGIKRALQRVLERVP 420
           LTTSLDQEGIKRALQRVLERVP
Sbjct: 361 LTTSLDQEGIKRALQRVLERVP 382

[Close]

BLAST of IVF0004718 vs. NCBI nr
Match: XP_038897871.1 (30S ribosomal protein S1 homolog B [Benincasa hispida])

HSP 1 Score: 645 bits (1663), Expect = 9.58e-231
Identity = 343/381 (90.03%), Postives = 357/381 (93.70%), Query Frame = 0


Query: 43  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 102
           MPIF AT+ SV  HSFLSLLAST+D +S    S+S ILP KSPSKRPS FP+RVSLSGKP
Sbjct: 1   MPIFAATLGSVFAHSFLSLLASTTDGAS----STSFILPQKSPSKRPSNFPARVSLSGKP 60

Query: 103 DPIAGVLDTSP---ESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMG 162
           DPIAGVLDTSP   ES+RRARRSADWKAAREYLD+GFIYEGRIEGSNAGGLLVRFYSLMG
Sbjct: 61  DPIAGVLDTSPSSPESLRRARRSADWKAAREYLDNGFIYEGRIEGSNAGGLLVRFYSLMG 120

Query: 163 FLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSG 222
           FLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADERNKKLIFSEKEA WSKFS 
Sbjct: 121 FLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADERNKKLIFSEKEAAWSKFSE 180

Query: 223 QVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 282
           QVGVGDVYEA+VGS+EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV
Sbjct: 181 QVGVGDVYEARVGSVEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 240

Query: 283 TVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG 342
           TVKVINVDRDKSRITLSI+QLEEDPLLETLDKVIPQ  SAEPDSFGPKSDSEI+PLPGL 
Sbjct: 241 TVKVINVDRDKSRITLSIKQLEEDPLLETLDKVIPQGGSAEPDSFGPKSDSEIMPLPGLE 300

Query: 343 TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQL 402
           TIIEEL QE+GIVD+ VNRQGFEKRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQL
Sbjct: 301 TIIEELLQEDGIVDICVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQL 360

Query: 403 TTSLDQEGIKRALQRVLERVP 420
           TTSLDQEGIKRALQRVLERVP
Sbjct: 361 TTSLDQEGIKRALQRVLERVP 377

[Close]

BLAST of IVF0004718 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-114
Identity = 226/370 (61.08%), Postives = 273/370 (73.78%), Query Frame = 0


Query: 57  SFLSL-LASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAG-----VLD 116
           +FLS  L     +SS+SS+ +S +  +KS S   +    R S       +       + D
Sbjct: 25  TFLSCPLRLLPSSSSSSSNRNSLVCIVKSFSSSATADTDRNSDQSASSSVLSASNSLLRD 84

Query: 117 TSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSH 176
           TS E+   A   +DWK A+ Y  SG  +EG ++G N GGLL+RF+SL+GFLP+PQLSPS 
Sbjct: 85  TSDEA--SAAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSR 144

Query: 177 SCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAK 236
           SCKEP KSI +IAK+L GS + VKV+QADE N+KLI SEK A W K+S  V VGDV+  +
Sbjct: 145 SCKEPQKSIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGR 204

Query: 237 VGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDK 296
           VGS+EDYGAF+HLRF DGLYHLTGLVHVSEVSWD VQDVRD+L +GDEV V V N+D++K
Sbjct: 205 VGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEK 264

Query: 297 SRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEG 356
           SRITLSI+QLE+DPLLETLDKVI +DSS    S    +   I PLPGL TI+EEL +E+G
Sbjct: 265 SRITLSIKQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEPLPGLETILEELLKEDG 324

Query: 357 IVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKR 416
           I  V++NRQGFEKRVVSQDLQLWLSN PP + KF LLARAGRQVQEI LTTSL+Q GIK+
Sbjct: 325 IEAVKINRQGFEKRVVSQDLQLWLSNTPPSDGKFVLLARAGRQVQEIHLTTSLEQGGIKK 384

Query: 417 ALQRVLERVP 421
           ALQ VLERVP
Sbjct: 385 ALQHVLERVP 392

[Close]

BLAST of IVF0004718 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 103.2 bits (256), Expect = 5.2e-22
Identity = 60/190 (31.58%), Postives = 100/190 (52.63%), Query Frame = 0


Query: 115 SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 174
           S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E
Sbjct: 167 SLRNIQYELAWERCRQLQAEDVIVKAKVIGANKGGLVALVEGLRGFVPFSQISSKAAAEE 226

Query: 175 PNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSL 234
                      L    I +K ++ DE   KL+ S ++A  +    Q+G+G V    V SL
Sbjct: 227 -----------LLEKEIPLKFVEVDEEQTKLVLSNRKAV-ADSQAQLGIGSVVLGVVQSL 286

Query: 235 EDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRIT 294
           + YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ DRD+ R++
Sbjct: 287 KPYGAFIDIG------GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRDRGRVS 338

Query: 295 LSIRQLEEDP 305
           LS ++LE  P
Sbjct: 347 LSTKKLEPTP 338

[Close]

BLAST of IVF0004718 vs. TAIR 10
Match: AT1G12800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 96.7 bits (239), Expect = 4.8e-20
Identity = 79/249 (31.73%), Postives = 120/249 (48.19%), Query Frame = 0


Query: 180 QDIAKSLTGSLISVKVIQADERNKKLIFS----EKEATWSK---FSGQVGVGDVYEAKVG 239
           Q    S  G  I V V+ A+  ++KLIFS    E E    K      ++ VGDV +  + 
Sbjct: 531 QKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLRVGDVVKCCIK 590

Query: 240 SLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSR 299
            +  +G F  L        +  LVH SEVSWD   D       G  V  KV  +D    R
Sbjct: 591 KITYFGIFCELE------GVPALVHQSEVSWDATLDPASYFKIGQIVEAKVHQLDFALER 650

Query: 300 ITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPL--PGLGTIIEELQQEEG 359
           I LS++++  DPL E L+ V+  D+    D  G +  +  +    P + ++I+EL+  EG
Sbjct: 651 IFLSLKEITPDPLTEALESVVGGDN----DQLGGRLQAAELDAEWPDVESLIKELEMVEG 710

Query: 360 IVDVRVNRQGFEKRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKR 419
           I  V  +R  F    ++   Q+++  AP  E ++ LLARAG +VQE+ +  SL +E +K 
Sbjct: 711 IQSVSKSR-FFLSPGLAPTFQVYM--APMFENQYKLLARAGNRVQELIVEASLSKEEMKS 766

[Close]

BLAST of IVF0004718 vs. TAIR 10
Match: AT4G29060.1 (elongation factor Ts family protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-07
Identity = 29/82 (35.37%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 224 GDVYEAKVGSLEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 283
           G  +  KV +++ +GAFV    F+D      GLVHVS++S + V+DV  +++ G EV V+
Sbjct: 136 GATFTGKVRAIQPFGAFVDFGAFTD------GLVHVSQLSDNFVKDVSSVVTIGQEVKVR 195

Query: 284 VINVDRDKSRITLSIRQLEEDP 305
           ++  D +  RI+L++R+ ++ P
Sbjct: 196 LVEADIESKRISLTMRENDDPP 211

[Close]

BLAST of IVF0004718 vs. TAIR 10
Match: AT4G29060.2 (elongation factor Ts family protein )

HSP 1 Score: 53.9 bits (128), Expect = 3.6e-07
Identity = 29/82 (35.37%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 224 GDVYEAKVGSLEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVK 283
           G  +  KV +++ +GAFV    F+D      GLVHVS++S + V+DV  +++ G EV V+
Sbjct: 136 GATFTGKVRAIQPFGAFVDFGAFTD------GLVHVSQLSDNFVKDVSSVVTIGQEVKVR 195

Query: 284 VINVDRDKSRITLSIRQLEEDP 305
           ++  D +  RI+L++R+ ++ P
Sbjct: 196 LVEADIESKRISLTMRENDDPP 211

The following BLAST results are available for this feature:

BLAST of IVF0004718 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29344	1.9e-21	31.05	30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS1 PE=...	[more]
Q93VC7	7.3e-21	31.58	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ...	[more]
Q9JZ44	2.6e-18	30.77	30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) OX=...	[more]
P74142	3.4e-18	29.35	30S ribosomal protein S1 homolog B OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]
P46228	5.7e-18	28.95	30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SA...	[more]

BLAST of IVF0004718 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXL4	3.5e-228	100.00	30S ribosomal protein S1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494553 PE=4...	[more]
A0A5A7TNY0	2.6e-199	99.21	30S ribosomal protein S1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KTX2	3.6e-188	93.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012510 PE=4 SV=1	[more]
A0A6J1GVD7	5.9e-175	80.33	LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 OS=Cucurbita moschata ...	[more]
A0A6J1IUF3	6.7e-171	86.13	uncharacterized protein LOC111479406 OS=Cucurbita maxima OX=3661 GN=LOC111479406...	[more]

BLAST of IVF0004718 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454000.1	2.97e-291	100.00	PREDICTED: 30S ribosomal protein S1 isoform X1 [Cucumis melo]	[more]
KAA0044578.1	1.36e-254	99.21	30S ribosomal protein S1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_004152109.1	5.11e-240	93.92	uncharacterized protein LOC101213559 isoform X2 [Cucumis sativus] >KGN53055.1 hy...	[more]
XP_011653045.1	1.14e-237	92.93	uncharacterized protein LOC101213559 isoform X1 [Cucumis sativus]	[more]
XP_038897871.1	9.58e-231	90.03	30S ribosomal protein S1 homolog B [Benincasa hispida]	[more]

BLAST of IVF0004718 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23700.1	2.6e-114	61.08	Nucleic acid-binding proteins superfamily	[more]
AT5G30510.1	5.2e-22	31.58	ribosomal protein S1	[more]
AT1G12800.1	4.8e-20	31.73	Nucleic acid-binding, OB-fold-like protein	[more]
AT4G29060.1	3.6e-07	35.37	elongation factor Ts family protein	[more]
AT4G29060.2	3.6e-07	35.37	elongation factor Ts family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 222..298 e-value: 2.3E-19 score: 80.3 coord: 133..210 e-value: 2.1E-5 score: 33.9
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 222..298 e-value: 5.5E-18 score: 65.1
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 224..298 score: 20.268621
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 135..210 score: 12.709093
None	No IPR available	GENE3D	2.40.50.140		coord: 219..300 e-value: 1.5E-25 score: 90.9
None	No IPR available	GENE3D	2.40.50.140		coord: 125..218 e-value: 1.8E-10 score: 42.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..98
None	No IPR available	PANTHER	PTHR47559	OS03G0844900 PROTEIN	coord: 57..420
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 223..311
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 133..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004718.1	IVF0004718.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0000481	maturation of 5S rRNA
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0034337	RNA folding
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding