IVF0004652 (gene) Melon (IVF77) v1

Overview
NameIVF0004652
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBI1-like protein
Locationchr01: 27113404 .. 27113667 (+)
RNA-Seq ExpressionIVF0004652
SyntenyIVF0004652
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGCGCCACCGATTGCCAGAGCAAATACGATGTGGAACCACCCCTATCGGAAGCCTGAAGCCGGAGTGGGGCCCCGTTTCCTAGTAATGCTGGAGTCGCCGCCGCAACTCCGATGGCCTTCATCCGCGAGGGTTTATTATTCCTTCATTTCCGTTCAGTTGATAGCCACCGTCGTGTCAGTTCGTCCTATAGCGACGTTCGTCGTTTGTGATAGTGAGGATTGGGCTTCTATATTTTGGTCCGAATTGCGCCCTTTATAA

mRNA sequence

ATGCACGCGCCACCGATTGCCAGAGCAAATACGATGTGGAACCACCCCTATCGGAAGCCTGAAGCCGGAGTGGGGCCCCGTTTCCTAGTAATGCTGGAGTCGCCGCCGCAACTCCGATGGCCTTCATCCGCGAGGGTTTATTATTCCTTCATTTCCGTTCAGTTGATAGCCACCGTCGTGTCAGTTCGTCCTATAGCGACGTTCGTCGTTTGTGATAGTGAGGATTGGGCTTCTATATTTTGGTCCGAATTGCGCCCTTTATAA

Coding sequence (CDS)

ATGCACGCGCCACCGATTGCCAGAGCAAATACGATGTGGAACCACCCCTATCGGAAGCCTGAAGCCGGAGTGGGGCCCCGTTTCCTAGTAATGCTGGAGTCGCCGCCGCAACTCCGATGGCCTTCATCCGCGAGGGTTTATTATTCCTTCATTTCCGTTCAGTTGATAGCCACCGTCGTGTCAGTTCGTCCTATAGCGACGTTCGTCGTTTGTGATAGTGAGGATTGGGCTTCTATATTTTGGTCCGAATTGCGCCCTTTATAA

Protein sequence

MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVVSVRPIATFVVCDSEDWASIFWSELRPL
Homology
BLAST of IVF0004652 vs. ExPASy TrEMBL
Match: A0A5A7V6R5 (BI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001100 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV 60
          MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV
Sbjct: 1  MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV 60

Query: 61 SVRPIATFVVCDSEDWASIFWSELRPL 88
          SVRPIATFVVCDSEDWASIFWSELRPL
Sbjct: 61 SVRPIATFVVCDSEDWASIFWSELRPL 87

BLAST of IVF0004652 vs. ExPASy TrEMBL
Match: A0A6J1DSW9 (BI1-like protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 46/70 (65.71%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 12 MWNHPYRK--PEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 71
          MW+HPYRK   EAG GPRFLVMLE PP LRW +  R  YS ISVQL+      ATVVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRW-AFIRKVYSIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDS 74
          PI+TF V DS
Sbjct: 62 PISTFFVRDS 69

BLAST of IVF0004652 vs. ExPASy TrEMBL
Match: A0A6J1DNI0 (BI1-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 46/70 (65.71%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 12 MWNHPYRK--PEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLI------ATVVSVR 71
          MW+HPYRK   EAG GPRFLVMLE PP LRW +  R  YS ISVQL+      ATVVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRW-AFIRKVYSIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDS 74
          PI+TF V DS
Sbjct: 62 PISTFFVRDS 69

BLAST of IVF0004652 vs. ExPASy TrEMBL
Match: B9SFF7 (Transmembrane BAX inhibitor motif-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0646030 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 7.0e-06
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 12 MWNHPYRKP--EAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIAT------VVSVR 71
          MW HPYRK   EAG  P + +MLES P+LRW S  R  YS + +QL+AT      VVSVR
Sbjct: 1  MWAHPYRKSDVEAGARPLYPMMLES-PELRW-SFIRKVYSILCIQLLATIAVASVVVSVR 60

BLAST of IVF0004652 vs. ExPASy TrEMBL
Match: A0A5N5GMV9 (BI1-like protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_022721 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05
Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 0

Query: 10 NTMWNHPYRK--PEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIAT------VVS 69
          N MWN  YRK  PEAG  P +  MLES P+LRW S  R  Y+ +++QL+AT      VVS
Sbjct: 2  NMMWNQAYRKSDPEAGARPLYPTMLES-PELRW-SFIRKIYAIVAMQLLATIAVAAVVVS 61

Query: 70 VRPIATFVV 71
          VRP+A F V
Sbjct: 62 VRPVAHFFV 68

BLAST of IVF0004652 vs. NCBI nr
Match: KAA0064032.1 (BI1-like protein [Cucumis melo var. makuwa] >TYK26183.1 BI1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (461), Expect = 8.30e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV 60
          MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV
Sbjct: 1  MHAPPIARANTMWNHPYRKPEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIATVV 60

Query: 61 SVRPIATFVVCDSEDWASIFWSELRPL 87
          SVRPIATFVVCDSEDWASIFWSELRPL
Sbjct: 61 SVRPIATFVVCDSEDWASIFWSELRPL 87

BLAST of IVF0004652 vs. NCBI nr
Match: XP_022155831.1 (BI1-like protein isoform X2 [Momordica charantia])

HSP 1 Score: 73.2 bits (178), Expect = 3.50e-14
Identity = 47/74 (63.51%), Postives = 51/74 (68.92%), Query Frame = 0

Query: 12 MWNHPYRK--PEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIAT------VVSVR 71
          MW+HPYRK   EAG GPRFLVMLE PP LRW    +VY S ISVQL+AT      VVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRWAFIRKVY-SIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDSEDWA 77
          PI+TF V DS   A
Sbjct: 62 PISTFFVRDSTGLA 73

BLAST of IVF0004652 vs. NCBI nr
Match: XP_022155830.1 (BI1-like protein isoform X1 [Momordica charantia])

HSP 1 Score: 73.2 bits (178), Expect = 4.64e-14
Identity = 47/74 (63.51%), Postives = 51/74 (68.92%), Query Frame = 0

Query: 12 MWNHPYRK--PEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIAT------VVSVR 71
          MW+HPYRK   EAG GPRFLVMLE PP LRW    +VY S ISVQL+AT      VVSVR
Sbjct: 2  MWSHPYRKVDAEAGAGPRFLVMLE-PPHLRWAFIRKVY-SIISVQLLATIAIAATVVSVR 61

Query: 72 PIATFVVCDSEDWA 77
          PI+TF V DS   A
Sbjct: 62 PISTFFVRDSTGLA 73

BLAST of IVF0004652 vs. NCBI nr
Match: XP_002524726.1 (protein LIFEGUARD 4 [Ricinus communis] >EEF37569.1 Transmembrane BAX inhibitor motif-containing protein, putative [Ricinus communis])

HSP 1 Score: 56.6 bits (135), Expect = 4.34e-07
Identity = 39/74 (52.70%), Postives = 45/74 (60.81%), Query Frame = 0

Query: 12 MWNHPYRKP--EAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIAT------VVSVR 71
          MW HPYRK   EAG  P + +MLESP +LRW S  R  YS + +QL+AT      VVSVR
Sbjct: 1  MWAHPYRKSDVEAGARPLYPMMLESP-ELRW-SFIRKVYSILCIQLLATIAVASVVVSVR 60

Query: 72 PIATFVVCDSEDWA 77
          PIATF V      A
Sbjct: 61 PIATFFVTTGAGLA 72

BLAST of IVF0004652 vs. NCBI nr
Match: XP_009370780.2 (PREDICTED: BI1-like protein [Pyrus x bretschneideri])

HSP 1 Score: 54.7 bits (130), Expect = 3.05e-06
Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 0

Query: 8   RANTMWNHPYRK--PEAGVGPRFLVMLESPPQLRWPSSARVYYSFISVQLIAT------V 67
           + N MWN  YRK  PEAG  P +  MLESP +LRW S  R  Y+ +++QL+AT      V
Sbjct: 100 KMNMMWNQAYRKSDPEAGARPLYPTMLESP-ELRW-SFIRKIYAIVAMQLLATIAVAAVV 159

Query: 68  VSVRPIATFVVCDSEDWA 77
           VSVRP+A F V      A
Sbjct: 160 VSVRPVAHFFVSTGAGLA 175

BLAST of IVF0004652 vs. TAIR 10
Match: AT4G02690.1 (Bax inhibitor-1 family protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.7e-04
Identity = 28/67 (41.79%), Postives = 34/67 (50.75%), Query Frame = 0

Query: 13 WNHPYRKPEAGVG-----PRFLVMLESPPQLRWPSSARVYYSFISVQLI------ATVVS 69
          WN PYRK +   G     P     +   P+LRW    R  YS I+ QL+      ATVV+
Sbjct: 4  WNLPYRKDDVETGVSSRRPLLYPAMHENPELRW-GFIRKVYSIIAFQLLATVAVAATVVT 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V6R51.1e-43100.00BI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001... [more]
A0A6J1DSW91.2e-1065.71BI1-like protein isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 ... [more]
A0A6J1DNI01.2e-1065.71BI1-like protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022859 PE=3 ... [more]
B9SFF77.0e-0656.72Transmembrane BAX inhibitor motif-containing protein, putative OS=Ricinus commun... [more]
A0A5N5GMV92.7e-0552.17BI1-like protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_02272... [more]
Match NameE-valueIdentityDescription
KAA0064032.18.30e-58100.00BI1-like protein [Cucumis melo var. makuwa] >TYK26183.1 BI1-like protein [Cucumi... [more]
XP_022155831.13.50e-1463.51BI1-like protein isoform X2 [Momordica charantia][more]
XP_022155830.14.64e-1463.51BI1-like protein isoform X1 [Momordica charantia][more]
XP_002524726.14.34e-0752.70protein LIFEGUARD 4 [Ricinus communis] >EEF37569.1 Transmembrane BAX inhibitor m... [more]
XP_009370780.23.05e-0647.44PREDICTED: BI1-like protein [Pyrus x bretschneideri][more]
Match NameE-valueIdentityDescription
AT4G02690.11.7e-0441.79Bax inhibitor-1 family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004652.1IVF0004652.1mRNA