IVF0004645 (gene) Melon (IVF77) v1

Overview


Name	IVF0004645
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-type domain-containing protein
Location	chr12: 23973819 .. 23974669 (-)
RNA-Seq Expression	IVF0004645
Synteny	IVF0004645

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTTTCTATTTCTCCCCCCAAATTCTCCTCTAATTAACCATCTAAAATCCATGTCCGCCGCCGCCGCCATCTCCGGCCTCCACTGCGAGGTCTGGCAGCCCCAAGACTTCTCCGAACCTTCCTGTTCGTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTTTACGTTTCCTCTTACGCAACTCATGGCGACGAAGTCATCAGCACACTCCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCTTTCTCTTGGTCCGCAATTTCCTCTATGCTTTCAGAAACCAATGTCCCTTATCATCTTCAACCTTTTTTCATTCACCAAATTTCCATTAGAGCTCGTGGAATCGCAACCGAACCCATTAACGCTCTCTCCCGAACCATTCCGATGGTCGTCGAGCTGATGCTCCCCGAAGACGCCATGGAAGGTTCCGGTTATGGGTCCGAACCCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCGTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGAGTGATTGTGTGATCTGTTTGGATGAGATTGGTTCAATTGGGTGCGAAATTGATGCTGTTCGAATGCCTTGTTTACATGTTTATCATCTAAATTGTATTCATAAATGGCTGGAACTCAGTAATCGTTGCCCATTGTGTCGGTTCCAGATGCCATTGGAAGAAGAATGAAGCTCTGTTTTTCTCTCCTTGCTCCATTTTGTAAACATATTTACTTTTCTTTATTGTGTTCCTTTTTTTCTTAAGAATGATTTCCTTTCAAACCTTCTTTGGAAGGATTATGAATTCGGAACCCCAC

mRNA sequence

CTTTTTTCTATTTCTCCCCCCAAATTCTCCTCTAATTAACCATCTAAAATCCATGTCCGCCGCCGCCGCCATCTCCGGCCTCCACTGCGAGGTCTGGCAGCCCCAAGACTTCTCCGAACCTTCCTGTTCGTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTTTACGTTTCCTCTTACGCAACTCATGGCGACGAAGTCATCAGCACACTCCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCTTTCTCTTGGTCCGCAATTTCCTCTATGCTTTCAGAAACCAATGTCCCTTATCATCTTCAACCTTTTTTCATTCACCAAATTTCCATTAGAGCTCGTGGAATCGCAACCGAACCCATTAACGCTCTCTCCCGAACCATTCCGATGGTCGTCGAGCTGATGCTCCCCGAAGACGCCATGGAAGGTTCCGGTTATGGGTCCGAACCCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCGTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGAGTGATTGTGTGATCTGTTTGGATGAGATTGGTTCAATTGGGTGCGAAATTGATGCTGTTCGAATGCCTTGTTTACATGTTTATCATCTAAATTGTATTCATAAATGGCTGGAACTCAGTAATCGTTGCCCATTGTGTCGGTTCCAGATGCCATTGGAAGAAGAATGAAGCTCTGTTTTTCTCTCCTTGCTCCATTTTGTAAACATATTTACTTTTCTTTATTGTGTTCCTTTTTTTCTTAAGAATGATTTCCTTTCAAACCTTCTTTGGAAGGATTATGAATTCGGAACCCCAC

Coding sequence (CDS)

ATGTCCGCCGCCGCCGCCATCTCCGGCCTCCACTGCGAGGTCTGGCAGCCCCAAGACTTCTCCGAACCTTCCTGTTCGTCTTCTTCTTCTTCTCAATTTCAACCCCCTGAATTCTTCATCGATTTTTACGTTTCCTCTTACGCAACTCATGGCGACGAAGTCATCAGCACACTCCGTTACAAGAATTTCCGGCAAAGATGTGATGTTCTAACTCAAGATTCTTTCTCTTGGTCCGCAATTTCCTCTATGCTTTCAGAAACCAATGTCCCTTATCATCTTCAACCTTTTTTCATTCACCAAATTTCCATTAGAGCTCGTGGAATCGCAACCGAACCCATTAACGCTCTCTCCCGAACCATTCCGATGGTCGTCGAGCTGATGCTCCCCGAAGACGCCATGGAAGGTTCCGGTTATGGGTCCGAACCCCACATGGGAATTGGGTCGGGTCGGGCCAGTAGGGCGTCGATTCAGGAAATGGAGAGAATTGAAATTGATGGGGTTTTGAGTGATTGTGTGATCTGTTTGGATGAGATTGGTTCAATTGGGTGCGAAATTGATGCTGTTCGAATGCCTTGTTTACATGTTTATCATCTAAATTGTATTCATAAATGGCTGGAACTCAGTAATCGTTGCCCATTGTGTCGGTTCCAGATGCCATTGGAAGAAGAATGA

Protein sequence

MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE

Homology

[Close]

BLAST of IVF0004645 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.6e-12
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCIHKWLE 206
           G   AS+ASI  M  +EIDG   +CVICL+E  S   E     MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 207 LSNRCPLCRFQMPLE 222
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of IVF0004645 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-10
Identity = 32/78 (41.03%), Postives = 51/78 (65.38%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLD--EIGSIGCEIDAVRMPCLHVYHLNCIHKW 206
           G+  A + +++ +  ++I+ V+S C +CLD  E+GS      A +MPC H +H +CI  W
Sbjct: 176 GTPPAKKEAVEALPTVKIEEVVS-CSVCLDDLEVGS-----QAKQMPCEHKFHSSCILPW 235

Query: 207 LELSNRCPLCRFQMPLEE 223
           LEL + CP+CRF++P EE
Sbjct: 236 LELHSSCPVCRFELPSEE 247

[Close]

BLAST of IVF0004645 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 29/83 (34.94%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEI--GSIGCEIDAVRMPCLHVYHLN 206
           G+  AS+++I  +  +++        ++ C +C+DE   GS     D  +MPC HV+H +
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGS-----DVKQMPCKHVFHQD 246

Query: 207 CIHKWLELSNRCPLCRFQMPLEE 223
           C+  WLEL N CP+CRF++P ++
Sbjct: 247 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of IVF0004645 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEID----GVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCIH 206
           G+  AS+++I+ + R+EI     G  ++C +C +   +   E +A  MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 207 KWLELSNRCPLCRFQMPLE 222
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of IVF0004645 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 26/81 (32.10%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCI 206
           G+  AS+++I+ +  + I     +   + C +C+D+        +A +MPC H+YH +C+
Sbjct: 195 GTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEE---GTEAKQMPCKHLYHKDCL 254

Query: 207 HKWLELSNRCPLCRFQMPLEE 223
             WLEL N CP+CR ++P ++
Sbjct: 255 LPWLELHNSCPVCRHELPTDD 272

[Close]

BLAST of IVF0004645 vs. ExPASy TrEMBL
Match: A0A5D3BJ05 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003020 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.7e-125
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY
Sbjct: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120
           KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI
Sbjct: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120

Query: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180
           PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS
Sbjct: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180

Query: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of IVF0004645 vs. ExPASy TrEMBL
Match: A0A1S3AU71 (uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.7e-125
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY
Sbjct: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120
           KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI
Sbjct: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120

Query: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180
           PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS
Sbjct: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180

Query: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of IVF0004645 vs. ExPASy TrEMBL
Match: A0A0A0LR28 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.4e-119
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 6   AISGLHCEVWQPQDFSEPSC-SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 65
           AISGLHCEVWQPQDFSEPSC SSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR
Sbjct: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64

Query: 66  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 125
           QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124

Query: 126 ELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 185
           EL+LPEDAME SGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE
Sbjct: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184

Query: 186 IDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           ID V+MPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of IVF0004645 vs. ExPASy TrEMBL
Match: A0A6J1KQS3 (uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.5e-102
Identity = 185/222 (83.33%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 2   SAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYK 61
           +AAAA+SGLHCEVWQPQDFSE  CS SSSS  + PEFFIDFYVSSYAT GD++ISTLRYK
Sbjct: 5   AAAAAVSGLHCEVWQPQDFSETHCSFSSSSS-ESPEFFIDFYVSSYATQGDQIISTLRYK 64

Query: 62  NFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIP 121
           NFRQRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QISI ARGIATEP NALSRTIP
Sbjct: 65  NFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNALSRTIP 124

Query: 122 MVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSI 181
           MVVEL+LPE+AME S YGS+  MG GS RASRASIQEMER+E++G LSDCVICLD+I S+
Sbjct: 125 MVVELVLPEEAMEDSSYGSDTIMGTGSRRASRASIQEMERVEMNGALSDCVICLDDIVSV 184

Query: 182 GCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
           G EIDA+RMPCLH+YH NCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 185 GSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of IVF0004645 vs. ExPASy TrEMBL
Match: A0A6J1CAF5 (E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC111008905 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.8e-74
Identity = 153/225 (68.00%), Postives = 173/225 (76.89%), Query Frame = 0


Query: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           MSAA    GLHCEVWQPQ+++E  CSSSSS   +PPEFFID YVSSYA  G E IS+LRY
Sbjct: 1   MSAA----GLHCEVWQPQEWAESDCSSSSS---EPPEFFIDLYVSSYANQGGETISSLRY 60

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120
           KNFR+R DV TQDS SWSAIS+MLSET+VPYHLQPFFI  IS+RAR IA +P NALSRTI
Sbjct: 61  KNFRRRRDVFTQDSLSWSAISTMLSETSVPYHLQPFFIQHISLRARRIAAQPTNALSRTI 120

Query: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEID-GVL-SDCVICLDEI 180
           P+VVEL+LP    E SG GS+P +  G GRASRASI+EMER EI+ G+   DC ICLDEI
Sbjct: 121 PIVVELVLPLPEEEESGSGSDPRVPNGPGRASRASIEEMERAEIELGICGGDCAICLDEI 180

Query: 181 GSIGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 224
                E  AV MPC H+YH NCI KWL+ +N CPLCRFQMPLE E
Sbjct: 181 -----ECGAVGMPCSHIYHRNCIVKWLQQNNLCPLCRFQMPLEME 213

[Close]

BLAST of IVF0004645 vs. NCBI nr
Match: XP_008437461.1 (PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 459 bits (1181), Expect = 3.53e-163
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY
Sbjct: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120
           KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI
Sbjct: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120

Query: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180
           PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS
Sbjct: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180

Query: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223
           IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of IVF0004645 vs. NCBI nr
Match: XP_004152533.1 (uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical protein Csa_014260 [Cucumis sativus])

HSP 1 Score: 437 bits (1124), Expect = 1.74e-154
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 6   AISGLHCEVWQPQDFSEPSCSSSSSS-QFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 65
           AISGLHCEVWQPQDFSEPSCSSSSSS QFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR
Sbjct: 5   AISGLHCEVWQPQDFSEPSCSSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYKNFR 64

Query: 66  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIPMVV 125
           QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQIS RARGIATEPINALSRTIPMVV
Sbjct: 65  QRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISTRARGIATEPINALSRTIPMVV 124

Query: 126 ELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 185
           EL+LPEDAME SGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE
Sbjct: 125 ELILPEDAMEDSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCE 184

Query: 186 IDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223
           ID V+MPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE
Sbjct: 185 IDVVQMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223

[Close]

BLAST of IVF0004645 vs. NCBI nr
Match: XP_038895883.1 (E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida])

HSP 1 Score: 407 bits (1047), Expect = 1.02e-142
Identity = 203/225 (90.22%), Postives = 209/225 (92.89%), Query Frame = 0


Query: 1   MSAAAAI--SGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTL 60
           M+AAAA   SGLHCEVWQPQDFSE   SSSSSSQ QPPEFFIDFYVSSYAT GDE+ISTL
Sbjct: 1   MAAAAANNNSGLHCEVWQPQDFSETPSSSSSSSQSQPPEFFIDFYVSSYATQGDEIISTL 60

Query: 61  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 120
           RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR
Sbjct: 61  RYKNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSR 120

Query: 121 TIPMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEI 180
           TIPMVVELMLPE+AME S YGS+ HMGI SGRASRASIQ+MER+EIDGVLSDCVICLDEI
Sbjct: 121 TIPMVVELMLPEEAMEDSSYGSDTHMGIVSGRASRASIQDMERVEIDGVLSDCVICLDEI 180

Query: 181 GSIGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223
            SIG EIDAVRMPCLHVYH NCIHKWLE SNRCPLCRFQMPLEEE
Sbjct: 181 VSIGYEIDAVRMPCLHVYHRNCIHKWLEFSNRCPLCRFQMPLEEE 225

[Close]

BLAST of IVF0004645 vs. NCBI nr
Match: KAG6584266.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385 bits (990), Expect = 4.97e-134
Identity = 187/222 (84.23%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 2   SAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRYK 61
           +AAAA+SGLHCEVWQPQDFSE  CS SSSS  + PEFFIDFYVSSYAT GD++ISTLRYK
Sbjct: 5   AAAAAVSGLHCEVWQPQDFSETHCSFSSSSS-ESPEFFIDFYVSSYATQGDQIISTLRYK 64

Query: 62  NFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTIP 121
           NFRQRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QISI ARGIATEP NALSRTIP
Sbjct: 65  NFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNALSRTIP 124

Query: 122 MVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGSI 181
           MVVEL+LPE+AME SGYGS+  MG GS RASRASIQEMER+E++GVLSDCVICLD+I S+
Sbjct: 125 MVVELVLPEEAMEDSGYGSDTIMGTGSRRASRASIQEMERVEMNGVLSDCVICLDDIVSV 184

Query: 182 GCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223
           G EIDA+RMPCLH+YH NCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 185 GSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of IVF0004645 vs. NCBI nr
Match: KAG7019862.1 (E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384 bits (987), Expect = 1.43e-133
Identity = 186/223 (83.41%), Postives = 204/223 (91.48%), Query Frame = 0


Query: 1   MSAAAAISGLHCEVWQPQDFSEPSCSSSSSSQFQPPEFFIDFYVSSYATHGDEVISTLRY 60
           ++AAAA+SGLHCEVWQPQDFSE  CS SSSS  + PEFFIDFYVSSYAT GD++ISTLRY
Sbjct: 4   VAAAAAVSGLHCEVWQPQDFSETHCSFSSSSS-ESPEFFIDFYVSSYATQGDQIISTLRY 63

Query: 61  KNFRQRCDVLTQDSFSWSAISSMLSETNVPYHLQPFFIHQISIRARGIATEPINALSRTI 120
           KNFRQRCDVLTQDSFSWSAIS+MLSETNVPYHLQPFFI QISI ARGIATEP NALSRTI
Sbjct: 64  KNFRQRCDVLTQDSFSWSAISTMLSETNVPYHLQPFFIQQISISARGIATEPTNALSRTI 123

Query: 121 PMVVELMLPEDAMEGSGYGSEPHMGIGSGRASRASIQEMERIEIDGVLSDCVICLDEIGS 180
           PMVVEL+LPE+AME SGYGS+  MG GS RASR SIQEMER+E++GVLSDCVICLD+I S
Sbjct: 124 PMVVELVLPEEAMEDSGYGSDTIMGTGSRRASRTSIQEMERVEMNGVLSDCVICLDDIVS 183

Query: 181 IGCEIDAVRMPCLHVYHLNCIHKWLELSNRCPLCRFQMPLEEE 223
           +G EIDA+RMPCLH+YH NCIHKWL+LSNRCPLCRFQMPLEEE
Sbjct: 184 VGSEIDALRMPCLHIYHRNCIHKWLQLSNRCPLCRFQMPLEEE 225

[Close]

BLAST of IVF0004645 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.0e-13
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCIHKWLE 206
           G   AS+ASI  M  +EIDG   +CVICL+E  S   E     MPC H +H  CI KWL 
Sbjct: 89  GRPPASKASIDAMPIVEIDGCEGECVICLEEWKS---EETVKEMPCKHRFHGGCIEKWLG 148

Query: 207 LSNRCPLCRFQMPLE 222
               CP+CR++MP++
Sbjct: 149 FHGSCPVCRYEMPVD 160

[Close]

BLAST of IVF0004645 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 29/83 (34.94%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEI--GSIGCEIDAVRMPCLHVYHLN 206
           G+  AS+++I  +  +++        ++ C +C+DE   GS     D  +MPC HV+H +
Sbjct: 187 GTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGS-----DVKQMPCKHVFHQD 246

Query: 207 CIHKWLELSNRCPLCRFQMPLEE 223
           C+  WLEL N CP+CRF++P ++
Sbjct: 247 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of IVF0004645 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10
Identity = 29/79 (36.71%), Postives = 49/79 (62.03%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEID----GVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCIH 206
           G+  AS+++I+ + R+EI     G  ++C +C +   +   E +A  MPC H++H +CI 
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFET---ETEAREMPCKHLFHDDCIV 230

Query: 207 KWLELSNRCPLCRFQMPLE 222
            WL + N CP+CRF++P E
Sbjct: 231 PWLSIRNSCPVCRFELPSE 246

[Close]

BLAST of IVF0004645 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEIDGVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCIHKWLE 206
           G+  A + +++ +  ++I+  L  C +CLD+   IG E  A  MPC H +H +C+  WLE
Sbjct: 200 GTPPAKKEAVEALATVKIEETL-QCSVCLDDF-EIGTE--AKLMPCTHKFHSDCLLPWLE 259

Query: 207 LSNRCPLCRFQMPLEE 223
           L + CP+CR+Q+P +E
Sbjct: 260 LHSSCPVCRYQLPADE 271

[Close]

BLAST of IVF0004645 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 147 GSGRASRASIQEMERIEI-----DGVLSDCVICLDEIGSIGCEIDAVRMPCLHVYHLNCI 206
           G   AS  +I  +  ++I        +S C +C++E    G   DA  +PC H+YH +CI
Sbjct: 195 GPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGG---DATELPCKHIYHKDCI 254

Query: 207 HKWLELSNRCPLCRFQMPL 221
             WL L+N CP+CR  +PL
Sbjct: 255 VPWLRLNNSCPICRRDLPL 270

The following BLAST results are available for this feature:

BLAST of IVF0004645 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	5.6e-12	46.67	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q6AVN2	4.0e-10	41.03	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
Q8LPN7	1.5e-09	34.94	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	2.0e-09	36.71	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
P0CH30	1.3e-08	32.10	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]

BLAST of IVF0004645 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ05	1.7e-125	100.00	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AU71	1.7e-125	100.00	uncharacterized protein LOC103482872 OS=Cucumis melo OX=3656 GN=LOC103482872 PE=...	[more]
A0A0A0LR28	5.4e-119	97.26	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045460 P...	[more]
A0A6J1KQS3	3.5e-102	83.33	uncharacterized protein LOC111495638 OS=Cucurbita maxima OX=3661 GN=LOC111495638...	[more]
A0A6J1CAF5	1.8e-74	68.00	E3 ubiquitin-protein ligase CIP8-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of IVF0004645 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437461.1	3.53e-163	100.00	PREDICTED: uncharacterized protein LOC103482872 [Cucumis melo] >TYJ99097.1 E3 ub...	[more]
XP_004152533.1	1.74e-154	97.26	uncharacterized protein LOC101217869 [Cucumis sativus] >KGN64248.1 hypothetical ...	[more]
XP_038895883.1	1.02e-142	90.22	E3 ubiquitin-protein ligase synoviolin A-like [Benincasa hispida]	[more]
KAG6584266.1	4.97e-134	84.23	E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019862.1	1.43e-133	83.41	E3 ubiquitin-protein ligase SIRP1, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of IVF0004645 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	4.0e-13	46.67	RING/U-box superfamily protein	[more]
AT3G19950.1	1.1e-10	34.94	RING/U-box superfamily protein	[more]
AT5G59550.1	1.4e-10	36.71	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G55530.1	3.1e-10	38.16	RING/U-box superfamily protein	[more]
AT1G60360.1	1.6e-09	36.71	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 171..214 e-value: 2.3E-6 score: 37.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 170..215 e-value: 2.0E-10 score: 40.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 171..215 score: 12.120453
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 144..220 e-value: 6.5E-16 score: 59.8
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 38..219
None	No IPR available	PANTHER	PTHR15710:SF138	FINGER PROTEIN, PUTATIVE-RELATED	coord: 38..219
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 170..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004645.1	IVF0004645.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding