IVF0004644 (gene) Melon (IVF77) v1

Overview
NameIVF0004644
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCysteine-rich RLK (Receptor-like protein kinase) 8
Locationchr10: 13400275 .. 13400945 (+)
RNA-Seq ExpressionIVF0004644
SyntenyIVF0004644
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTACTTAAAGGCGTGTCCAGCGTTTTTAGAAAAATTCCCTCAGACTGTGGTAAAAGACGACATTTGTACAATACCTAACCTTCCCCGCATAATCAATCTCCACAGGAACAAGGAGAAAACCAAGTGCCTAAAGACCAAGAAAGAAGGACAAACAACGGTAGTTGATGAAGTGGAGACAAAGAAGAAGAAGAGAGGGAGGATAAGCAAGTCCCATTGAAGCGAAAGAGAAAAGGCGAGGAGGAGGATTCGAGTTTGAAGGAAAAGATGAGACTTAAAGCCAAGGACTCTAGGGACCCTTTGTATCTTGCATTGACCATAGTGCCCCAAGACCAAACGCCTAAAGAGACCATCTCGCTCCCAAAATCTAAAACTACTATGGCCAAAATCATCAGTTCACCATCTGGAACGCCACCACCACCACTTCCATCAATCCAAAAACAAACTCCCTCAACATCCAAAACCAAATCGCCTAGCCCTTCCCATAAAATCCAAACTCATACTTTCTTAATGAGACAAAAGGACACTTTTCAAACTCTTGTCGTAACCTTGCTCGATCCAACCTTATTAGAAAACCCTAGCCTTGATGATCCCCTAACCAACCAAGGGGATGATTCATTACAAGAGTTATTTGAAGACTCAATCTGTGACCCCTTTAGCGTTCATTGA

mRNA sequence

ATGCTCTACTTAAAGGCGTGTCCAGCGTTTTTAGAAAAATTCCCTCAGACTGTGGTAAAAGACGACATTTGTACAATACCTAACCTTCCCCGCATAATCAATCTCCACAGGAACAAGGAGAAAACCAAGTGCCTAAAGACCAAGAAAGAAGGACAAACAACGGTAGTTGATGAAGATAAGCAAGTCCCATTGAAGCGAAAGAGAAAAGGCGAGGAGGAGGATTCGAGTTTGAAGGAAAAGATGAGACTTAAAGCCAAGGACTCTAGGGACCCTTTGTATCTTGCATTGACCATAGTGCCCCAAGACCAAACGCCTAAAGAGACCATCTCGCTCCCAAAATCTAAAACTACTATGGCCAAAATCATCAGTTCACCATCTGGAACGCCACCACCACCACTTCCATCAATCCAAAAACAAACTCCCTCAACATCCAAAACCAAATCGCCTAGCCCTTCCCATAAAATCCAAACTCATACTTTCTTAATGAGACAAAAGGACACTTTTCAAACTCTTGTCGTAACCTTGCTCGATCCAACCTTATTAGAAAACCCTAGCCTTGATGATCCCCTAACCAACCAAGGGGATGATTCATTACAAGAGTTATTTGAAGACTCAATCTGTGACCCCTTTAGCGTTCATTGA

Coding sequence (CDS)

ATGCTCTACTTAAAGGCGTGTCCAGCGTTTTTAGAAAAATTCCCTCAGACTGTGGTAAAAGACGACATTTGTACAATACCTAACCTTCCCCGCATAATCAATCTCCACAGGAACAAGGAGAAAACCAAGTGCCTAAAGACCAAGAAAGAAGGACAAACAACGGTAGTTGATGAAGATAAGCAAGTCCCATTGAAGCGAAAGAGAAAAGGCGAGGAGGAGGATTCGAGTTTGAAGGAAAAGATGAGACTTAAAGCCAAGGACTCTAGGGACCCTTTGTATCTTGCATTGACCATAGTGCCCCAAGACCAAACGCCTAAAGAGACCATCTCGCTCCCAAAATCTAAAACTACTATGGCCAAAATCATCAGTTCACCATCTGGAACGCCACCACCACCACTTCCATCAATCCAAAAACAAACTCCCTCAACATCCAAAACCAAATCGCCTAGCCCTTCCCATAAAATCCAAACTCATACTTTCTTAATGAGACAAAAGGACACTTTTCAAACTCTTGTCGTAACCTTGCTCGATCCAACCTTATTAGAAAACCCTAGCCTTGATGATCCCCTAACCAACCAAGGGGATGATTCATTACAAGAGTTATTTGAAGACTCAATCTGTGACCCCTTTAGCGTTCATTGA

Protein sequence

MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETISLPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH
Homology
BLAST of IVF0004644 vs. ExPASy TrEMBL
Match: A0A5A7VP61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00820 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.4e-108
Identity = 213/223 (95.52%), Postives = 213/223 (95.52%), Query Frame = 0

Query: 1   MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVD--- 60
           MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVD   
Sbjct: 1   MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEVE 60

Query: 61  -------EDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETIS 120
                  EDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETIS
Sbjct: 61  TKEEEEREDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETIS 120

Query: 121 LPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQT 180
           LPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQT
Sbjct: 121 LPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQT 180

Query: 181 LVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH 214
           LVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH
Sbjct: 181 LVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH 223

BLAST of IVF0004644 vs. ExPASy TrEMBL
Match: A0A5A7T9E0 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00320 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19
Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 0

Query: 83  LKAKDSRDPLYLALTIVPQDQTPKETISLPKSKTTM-AKIISSPSGTPPPP--------- 142
           LKAKDSRD  +LALT +PQ++ P +TI  PKS++ + AKIISS S TPP P         
Sbjct: 167 LKAKDSRDASFLALTTIPQNEEPIKTILPPKSQSKIKAKIISSQSDTPPHPPTKSKTLQA 226

Query: 143 LPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENPSLDDPLTN 202
            P IQK T S SK KSP+PS +IQ HT   +QK T Q+LV TLLDP+  + P+L+DPLTN
Sbjct: 227 SPKIQKLTSSQSKIKSPNPSCEIQIHTSYSQQKTTPQSLVATLLDPSTTKTPNLEDPLTN 286

Query: 203 QGDDSLQELFE 204
           QG    +  F+
Sbjct: 287 QGMSQTRSYFK 297

BLAST of IVF0004644 vs. ExPASy TrEMBL
Match: A0A5D3C6C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1085G00060 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 0

Query: 68  RKGEEEDS-SLKEKMRLKAKDSRDPLYLALTIVPQDQT--PKETISLPKSKTTMAKIISS 127
           +KGE+E S S K++ R K K+S+DP  L +   P  QT  P   + LPK  T+  K  +S
Sbjct: 14  KKGEDEASRSKKQEKRPKVKESKDPFPLTIITPPIVQTIIPPSPLKLPKKTTSSTKSKTS 73

Query: 128 PSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENP 187
                   LPS++ QT +  K+K+ SP  +IQT T  MRQ++    LVV L + T L  P
Sbjct: 74  --------LPSLKIQTSTPEKSKTTSPPRQIQTTTTSMRQEENPLALVVALPNQT-LPVP 133

Query: 188 SLDDPLTNQGDDSL-QELFEDSICDPFS 212
            L++P TNQGD  L QE FEDS+CD F+
Sbjct: 134 DLNNPSTNQGDVELYQESFEDSLCDLFT 152

BLAST of IVF0004644 vs. ExPASy TrEMBL
Match: A0A5A7VKE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001180 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.0e-10
Identity = 54/120 (45.00%), Postives = 70/120 (58.33%), Query Frame = 0

Query: 19  VKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQ--TTVVD--------EDKQVPLKRKR 78
           +KD++CT   L R+I +H+NK + KCLKTK+ GQ    VVD        E+  VPLK KR
Sbjct: 78  IKDEVCTASTLHRVIAIHKNKARLKCLKTKQAGQIEVKVVDDKDEEEESEEDNVPLKCKR 137

Query: 79  KGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETISLPKSKTTMAK---IISSP 126
           +GEEE    K+    KAKDS+D L  A T  P+ + P  T S  KSK + AK    +SSP
Sbjct: 138 QGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKKKKPTTTFSPIKSKFSKAKTSQTLSSP 197

BLAST of IVF0004644 vs. ExPASy TrEMBL
Match: A0A5D3DZP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00820 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-08
Identity = 57/145 (39.31%), Postives = 76/145 (52.41%), Query Frame = 0

Query: 19  VKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVD---------EDKQVPLKRKRK 78
           +KDD+C++  L RII +H+NK + K L  KKEGQ  V D         ++ +VPLK KR+
Sbjct: 136 MKDDVCSLSILRRIIAIHKNKARLKRLNNKKEGQVEVTDVEVSEEEERDEDEVPLKHKRQ 195

Query: 79  GEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETISLPKSKTTMAKIISSPSGTP 138
            EEE S  K     KAKDS+  L  A TI P+ +    T S  KSK+   K  +S S   
Sbjct: 196 VEEEASRSKRVKTSKAKDSKKTLPHASTISPKKKKLTNTFSPTKSKSKSFKATTSRSS-- 255

Query: 139 PPPLPSIQKQTPSTSKTKSPSPSHK 155
               P IQ Q+P   K     P+H+
Sbjct: 256 ----PKIQNQSPHNLK-----PNHQ 269

BLAST of IVF0004644 vs. NCBI nr
Match: KAA0067069.1 (hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK26305.1 hypothetical protein E5676_scaffold14G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 399 bits (1026), Expect = 1.01e-139
Identity = 213/223 (95.52%), Postives = 213/223 (95.52%), Query Frame = 0

Query: 1   MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDE-- 60
           MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDE  
Sbjct: 1   MLYLKACPAFLEKFPQTVVKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDEVE 60

Query: 61  --------DKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETIS 120
                   DKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETIS
Sbjct: 61  TKEEEEREDKQVPLKRKRKGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETIS 120

Query: 121 LPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQT 180
           LPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQT
Sbjct: 121 LPKSKTTMAKIISSPSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQT 180

Query: 181 LVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH 213
           LVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH
Sbjct: 181 LVVTLLDPTLLENPSLDDPLTNQGDDSLQELFEDSICDPFSVH 223

BLAST of IVF0004644 vs. NCBI nr
Match: KAA0037929.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK19006.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (265), Expect = 1.25e-23
Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 0

Query: 83  LKAKDSRDPLYLALTIVPQDQTPKETISLPKSKTTM-AKIISSPSGTPPPP--------- 142
           LKAKDSRD  +LALT +PQ++ P +TI  PKS++ + AKIISS S TPP P         
Sbjct: 167 LKAKDSRDASFLALTTIPQNEEPIKTILPPKSQSKIKAKIISSQSDTPPHPPTKSKTLQA 226

Query: 143 LPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENPSLDDPLTN 202
            P IQK T S SK KSP+PS +IQ HT   +QK T Q+LV TLLDP+  + P+L+DPLTN
Sbjct: 227 SPKIQKLTSSQSKIKSPNPSCEIQIHTSYSQQKTTPQSLVATLLDPSTTKTPNLEDPLTN 286

BLAST of IVF0004644 vs. NCBI nr
Match: KAE8637516.1 (hypothetical protein CSA_004749 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 1.11e-14
Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 0

Query: 25  TIPNLPRIINLHRNKEKTKCLKTKKEGQTTVVDE---------------DKQVPLKRKRK 84
           T+ NL R+INLH +K K K LKTKKEG+   V+E               +KQ PLKRKRK
Sbjct: 19  TVSNLLRVINLHLSKAKDKRLKTKKEGKVEEVNEVESKEEEEEEEEMEDEKQTPLKRKRK 78

Query: 85  GEEEDSSLKEKMR-LKAKDSRDPLYLALTIVPQDQTPKETISLPKSKT 116
           G++E    ++K+R L+  DS+DP YL + IVP DQ PK+ IS   SKT
Sbjct: 79  GKDETLGSRKKVRKLETNDSKDPSYLVVIIVPDDQMPKKIISPSPSKT 126

BLAST of IVF0004644 vs. NCBI nr
Match: KAA0037287.1 (hypothetical protein E6C27_scaffold68G00220 [Cucumis melo var. makuwa] >TYK05896.1 hypothetical protein E5676_scaffold1085G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 4.84e-14
Identity = 64/148 (43.24%), Postives = 87/148 (58.78%), Query Frame = 0

Query: 68  RKGEEEDS-SLKEKMRLKAKDSRDPLYLALTIVPQDQT--PKETISLPKSKTTMAKIISS 127
           +KGE+E S S K++ R K K+S+DP  L +   P  QT  P   + LPK  T+  K  +S
Sbjct: 14  KKGEDEASRSKKQEKRPKVKESKDPFPLTIITPPIVQTIIPPSPLKLPKKTTSSTKSKTS 73

Query: 128 PSGTPPPPLPSIQKQTPSTSKTKSPSPSHKIQTHTFLMRQKDTFQTLVVTLLDPTLLENP 187
                   LPS++ QT +  K+K+ SP  +IQT T  MRQ++    LVV L + TL   P
Sbjct: 74  --------LPSLKIQTSTPEKSKTTSPPRQIQTTTTSMRQEENPLALVVALPNQTL-PVP 133

Query: 188 SLDDPLTNQGDDSL-QELFEDSICDPFS 211
            L++P TNQGD  L QE FEDS+CD F+
Sbjct: 134 DLNNPSTNQGDVELYQESFEDSLCDLFT 152

BLAST of IVF0004644 vs. NCBI nr
Match: KAA0066896.1 (hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK27232.1 hypothetical protein E5676_scaffold236G001180 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 1.17e-11
Identity = 51/112 (45.54%), Postives = 66/112 (58.93%), Query Frame = 0

Query: 19  VKDDICTIPNLPRIINLHRNKEKTKCLKTKKEGQ--TTVVD--------EDKQVPLKRKR 78
           +KD++CT   L R+I +H+NK + KCLKTK+ GQ    VVD        E+  VPLK KR
Sbjct: 78  IKDEVCTASTLHRVIAIHKNKARLKCLKTKQAGQIEVKVVDDKDEEEESEEDNVPLKCKR 137

Query: 79  KGEEEDSSLKEKMRLKAKDSRDPLYLALTIVPQDQTPKETISLPKSKTTMAK 120
           +GEEE    K+    KAKDS+D L  A T  P+ + P  T S  KSK + AK
Sbjct: 138 QGEEEALGSKKAKTSKAKDSKDTLPHASTTCPKKKKPTTTFSPIKSKFSKAK 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VP612.4e-10895.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T9E01.6e-1952.67Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3C6C62.1e-1143.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7VKE93.0e-1045.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DZP51.7e-0839.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0067069.11.01e-13995.52hypothetical protein E6C27_scaffold38G001190 [Cucumis melo var. makuwa] >TYK2630... [more]
KAA0037929.11.25e-2352.67Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T... [more]
KAE8637516.11.11e-1448.15hypothetical protein CSA_004749 [Cucumis sativus][more]
KAA0037287.14.84e-1443.24hypothetical protein E6C27_scaffold68G00220 [Cucumis melo var. makuwa] >TYK05896... [more]
KAA0066896.11.17e-1145.54hypothetical protein E6C27_scaffold550G00090 [Cucumis melo var. makuwa] >TYK2723... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004644.1IVF0004644.1mRNA