IVF0004628 (gene) Melon (IVF77) v1

Overview


Name	IVF0004628
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Protein MNN4-like
Location	chr04: 9365724 .. 9366451 (-)
RNA-Seq Expression	IVF0004628
Synteny	IVF0004628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGAAAGCAAGTCTTGACTGAAGCTCTCCAAGCCAATTCGTTGATGAAACTAAAGAAATCCATTCCAGCGGTCCTATGTCAAAGCAAAGTAAGAGAGAAAAAAAAACAAAGCATTGAAGAGTGTGGTCATCAATGAAGTTAAAATTCAGTTACCTGTGGAAAAACTTGGTGAGTTGCTCGAAATAGTCTCCGAGGAGACAATGAAGAAAGAGAAAAGGCAGAGAGAGAGCAAAAAGAGAAAGATAAAGAGGAAAATTTATAAGGGAAAGACTAGATCAGGAAGAGAAAGAAAAGAAGGATAAGTTGAGGAAGGAGGAAGAAGAGAAGAAGAAAAGAAAGGAAGTAGAGAAAAAGAAAAAGAAAATAGAAGAGAAAGTGCACAAGGAAGAGCAGGAAGAGCAGGAAGAAGAGGTATGTGAAATAAGTGCCTCCATGCCCATTGCGAAAATAAAATTCGATAGGGTGTCAAGGAAAGCCCAGAAAGAGAAGGAAAAGGTAAAAACTAGGTTGTTAAAGATTAAGGTTAAGGCACAAGGCGTTAAGGCCTTAGCCGAAGAAAAGAAAGAAATTAAGTTGAAGGAGCAGAAAGAGCTCCTCAATAAGGTGAATAAATTGGCCCTCTCCGTGGAGAATAGTAAGGAAAAAGAAAAGACCTTCGAGGAATATTGTGAGGAGTTTGAGAAAGAAATCAGTGAATTAAGTCCTCTTAAAGATTATGCATAA

mRNA sequence

ATGTCTGGAAAGCAAGTCTTGACTGAAGCTCTCCAAGCCAATTCGTTGATGAAACTAAAGAAATCCATTCCAGCGGTCCTATGTCAAAGCAAAGTAAGAGAGAAAAAAAAACAAAGCATTGAAGAAGGAAAATTTATAAGGGAAAGACTAGATCAGGAAGAGAAAGAAAAGAAGGATAAGTTGAGGAAGGAGGAAGAAGAGAAGAAGAAAAGAAAGGAAGTAGAGAAAAAGAAAAAGAAAATAGAAGAGAAAGTGCACAAGGAAGAGCAGGAAGAGCAGGAAGAAGAGGTATGTGAAATAAGTGCCTCCATGCCCATTGCGAAAATAAAATTCGATAGGGTGTCAAGGAAAGCCCAGAAAGAGAAGGAAAAGGTAAAAACTAGGTTGTTAAAGATTAAGGTTAAGGCACAAGGCGTTAAGGCCTTAGCCGAAGAAAAGAAAGAAATTAAGTTGAAGGAGCAGAAAGAGCTCCTCAATAAGGTGAATAAATTGGCCCTCTCCGTGGAGAATAGTAAGGAAAAAGAAAAGACCTTCGAGGAATATTGTGAGGAGTTTGAGAAAGAAATCAGTGAATTAAGTCCTCTTAAAGATTATGCATAA

Coding sequence (CDS)

ATGTCTGGAAAGCAAGTCTTGACTGAAGCTCTCCAAGCCAATTCGTTGATGAAACTAAAGAAATCCATTCCAGCGGTCCTATGTCAAAGCAAAGTAAGAGAGAAAAAAAAACAAAGCATTGAAGAAGGAAAATTTATAAGGGAAAGACTAGATCAGGAAGAGAAAGAAAAGAAGGATAAGTTGAGGAAGGAGGAAGAAGAGAAGAAGAAAAGAAAGGAAGTAGAGAAAAAGAAAAAGAAAATAGAAGAGAAAGTGCACAAGGAAGAGCAGGAAGAGCAGGAAGAAGAGGTATGTGAAATAAGTGCCTCCATGCCCATTGCGAAAATAAAATTCGATAGGGTGTCAAGGAAAGCCCAGAAAGAGAAGGAAAAGGTAAAAACTAGGTTGTTAAAGATTAAGGTTAAGGCACAAGGCGTTAAGGCCTTAGCCGAAGAAAAGAAAGAAATTAAGTTGAAGGAGCAGAAAGAGCTCCTCAATAAGGTGAATAAATTGGCCCTCTCCGTGGAGAATAGTAAGGAAAAAGAAAAGACCTTCGAGGAATATTGTGAGGAGTTTGAGAAAGAAATCAGTGAATTAAGTCCTCTTAAAGATTATGCATAA

Protein sequence

MSGKQVLTEALQANSLMKLKKSIPAVLCQSKVREKKKQSIEEGKFIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA

Homology

[Close]

BLAST of IVF0004628 vs. ExPASy TrEMBL
Match: A0A5D3BFC8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00900 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.3e-63
Identity = 158/171 (92.40%), Postives = 163/171 (95.32%), Query Frame = 0


Query: 29  QSKVREKKKQSIEEGKFIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKE 88
           + K   ++K+  +E  FIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKE
Sbjct: 49  REKAEREQKEKDKEENFIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKE 108

Query: 89  EQEEQEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKE 148
           EQEEQEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKE
Sbjct: 109 EQEEQEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKE 168

Query: 149 IKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA 200
           IKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA
Sbjct: 169 IKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA 219

[Close]

BLAST of IVF0004628 vs. ExPASy TrEMBL
Match: A0A5A7TGV4 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00910 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.7e-19
Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 106 IAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLA 165
           + + +F+RV  KAQ++ EKV+ RLLKIKVKAQ   ALAE KKEIKL++ +ELLNKV+KLA
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 166 LSVENSKEKEKTFEEYCEEFEKEISELSPLKD 198
           LSVE  KEKEKTFEE+ +EFEKEI E SPL+D
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLED 92

[Close]

BLAST of IVF0004628 vs. ExPASy TrEMBL
Match: A0A5A7T8V8 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001560 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 9.7e-19
Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 99  EISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELL 158
           EI AS+PI + KF+RV+ KAQK+ E+VK+R+LKIK + QGVKAL EEK + K+K  KEL 
Sbjct: 3   EIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKELR 62

Query: 159 NKVNKLALSVENSKE--KEKTFEEYCEEFEKEISELSPLKDYA 200
           +KV ++A SVE SKE  KEKTFEE+CEE  KEI ELS LKD A
Sbjct: 63  SKVEEVAFSVEKSKEKGKEKTFEEFCEEASKEIKELSSLKDDA 105

[Close]

BLAST of IVF0004628 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15
Identity = 71/151 (47.02%), Postives = 111/151 (73.51%), Query Frame = 0


Query: 47  RERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCEISASMPI 106
           + R  +EEKE+++K R+E+E K K KE E++KK+ EE+  ++E+ +++ +  ++ +S  I
Sbjct: 30  KAREKKEEKERREKERREKERKAKEKEKERRKKRNEEERRRKEELKKQGKKEKVQSSPSI 89

Query: 107 AKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLAL 166
           A  +F+RV+RKAQK+KEKV + LLK+KV  QG KAL +EKKE+KL+EQ+ELLNK++K+ L
Sbjct: 90  APTEFERVARKAQKKKEKVVSGLLKMKVIVQGAKALTQEKKEVKLREQEELLNKIDKVPL 149

Query: 167 SVENSKEKEKTFEEYCEEFEKEISELSPLKD 198
             +  K K    EE  EEF++E+  LSPL++
Sbjct: 150 FAKKRKVKNTLSEELVEEFKRELDNLSPLEE 180

[Close]

BLAST of IVF0004628 vs. ExPASy TrEMBL
Match: A0A5A7V1I3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005890 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.3e-11
Identity = 60/137 (43.80%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 46  IRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEEQEEEVCEISASMP 105
           + + ++++++EK+ K RK+E+ KK++ E  +K+KK+ E+  KE  +++         S  
Sbjct: 1   MEKEMEEKKEEKEKKKRKDEKNKKEKDEARRKEKKVPEEAQKETMQKE-------GTSSA 60

Query: 106 IAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLA 165
           I + KF+R+ +K Q++ EKVK+ LLKI VKA GVKAL +EKKE KL++++ELL+KV K+ 
Sbjct: 61  IVETKFERLIKKTQQKTEKVKSGLLKINVKAHGVKALVQEKKETKLRKREELLSKVEKVT 120

Query: 166 LSVENSKEKEKTFEEYC 183
           LS    K KEKTF+E+C
Sbjct: 121 LSTNKGKGKEKTFDEHC 130

[Close]

BLAST of IVF0004628 vs. NCBI nr
Match: TYJ97774.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (648), Expect = 1.82e-82
Identity = 160/167 (95.81%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 33  REKKKQSIEEGKFIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEE 92
           RE+K++  EE  FIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEE
Sbjct: 54  REQKEKDKEEN-FIRERLDQEEKEKKDKLRKEEEEKKKRKEVEKKKKKIEEKVHKEEQEE 113

Query: 93  QEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLK 152
           QEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLK
Sbjct: 114 QEEEVCEISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLK 173

Query: 153 EQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA 199
           EQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA
Sbjct: 174 EQKELLNKVNKLALSVENSKEKEKTFEEYCEEFEKEISELSPLKDYA 219

[Close]

BLAST of IVF0004628 vs. NCBI nr
Match: KAA0038037.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK20565.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (261), Expect = 3.64e-25
Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 99  EISASMPIAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELL 158
           EI AS+PI + KF+RV+ KAQK+ E+VK+R+LKIK + QGVKAL EEK + K+K  KEL 
Sbjct: 3   EIGASLPIVEAKFERVAEKAQKKTEQVKSRVLKIKEQTQGVKALVEEKLKAKMKGWKELR 62

Query: 159 NKVNKLALSVENSKEK--EKTFEEYCEEFEKEISELSPLKDYA 199
           +KV ++A SVE SKEK  EKTFEE+CEE  KEI ELS LKD A
Sbjct: 63  SKVEEVAFSVEKSKEKGKEKTFEEFCEEASKEIKELSSLKDDA 105

[Close]

BLAST of IVF0004628 vs. NCBI nr
Match: KAA0041276.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (262), Expect = 1.16e-24
Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 106 IAKIKFDRVSRKAQKEKEKVKTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLA 165
           + + +F+RV  KAQ++ EKV+ RLLKIKVKAQ   ALAE KKEIKL++ +ELLNKV+KLA
Sbjct: 1   MVQTEFERVVNKAQEKTEKVRARLLKIKVKAQRAMALAEGKKEIKLRQPEELLNKVDKLA 60

Query: 166 LSVENSKEKEKTFEEYCEEFEKEISELSPLKD 197
           LSVE  KEKEKTFEE+ +EFEKEI E SPL+D
Sbjct: 61  LSVEKGKEKEKTFEEFYKEFEKEIDEFSPLED 92

[Close]

BLAST of IVF0004628 vs. NCBI nr
Match: TYK01186.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.35e-21
Identity = 56/72 (77.78%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 126 KTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEF 185
           +T LLKIKVKAQG+KAL EEKKEIKL+E++ELLNKV+K+ALSVE  KE EKTFEE+CEEF
Sbjct: 41  RTGLLKIKVKAQGIKALEEEKKEIKLREKEELLNKVDKVALSVEKRKE-EKTFEEHCEEF 100

Query: 186 EKEISELSPLKD 197
           +KEI ELSPL+D
Sbjct: 101 KKEIEELSPLED 111

[Close]

BLAST of IVF0004628 vs. NCBI nr
Match: XP_008465464.1 (PREDICTED: protein MNN4-like [Cucumis melo] >KAA0062653.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 2.35e-21
Identity = 56/72 (77.78%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 126 KTRLLKIKVKAQGVKALAEEKKEIKLKEQKELLNKVNKLALSVENSKEKEKTFEEYCEEF 185
           +T LLKIKVKAQG+KAL EEKKEIKL+E++ELLNKV+K+ALSVE  KE EKTFEE+CEEF
Sbjct: 41  RTGLLKIKVKAQGIKALEEEKKEIKLREKEELLNKVDKVALSVEKRKE-EKTFEEHCEEF 100

Query: 186 EKEISELSPLKD 197
           +KEI ELSPL+D
Sbjct: 101 KKEIEELSPLED 111

The following BLAST results are available for this feature:

BLAST of IVF0004628 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BFC8	1.3e-63	92.40	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A5A7TGV4	5.7e-19	67.39	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G009...	[more]
A0A5A7T8V8	9.7e-19	63.11	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00...	[more]
A0A5D3BNL6	2.2e-15	47.02	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0...	[more]
A0A5A7V1I3	3.3e-11	43.80	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005...	[more]

BLAST of IVF0004628 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97774.1	1.82e-82	95.81	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0038037.1	3.64e-25	63.11	protein MNN4-like [Cucumis melo var. makuwa] >TYK20565.1 protein MNN4-like [Cucu...	[more]
KAA0041276.1	1.16e-24	67.39	protein MNN4-like [Cucumis melo var. makuwa] >TYK16072.1 protein MNN4-like [Cucu...	[more]
TYK01186.1	2.35e-21	77.78	protein MNN4-like [Cucumis melo var. makuwa]	[more]
XP_008465464.1	2.35e-21	77.78	PREDICTED: protein MNN4-like [Cucumis melo] >KAA0062653.1 protein MNN4-like [Cuc...	[more]

BLAST of IVF0004628 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..96
None	No IPR available	COILS	Coil	Coil	coord: 168..188
None	No IPR available	COILS	Coil	Coil	coord: 144..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004628.1	IVF0004628.1	mRNA