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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGCAGGTAGGAAAATGAGCAAAATCCTGCGATATGGTTTTATTTCATTTAAACCAATGTGATATAGGTATCAGGGCTAAGAAATATTTTAAAAAAACAAAACCCTAGTTTTAACTTAGAGCATCAAACCCTAGCTGCCTCACCTAGCCGGCGCCGATGGAAACCGACCGGAACCCTAGCTACTGTCTTTAACAGCACACAACACCTCCGGCGTGTTTGTGGTCGAAGTATCTGTTCCCGCCCGTCAGATCACCCTTTAGTCCACCCCAACCGTCGACTTTGAAGTCCGTTTGTGGTTGTGTTAGCAGACATTGTTCGTTGGCTTCGATCGCGGTTGTTCGGCGGGATCGTGGCAAAAGATCTGTGTGTTTGCGAGAGGATGGAGATGAAAATGGGAAGAGAGTGGAGCGAGGGAGTGAGGGAGTAG mRNA sequence ATGGGCAGTTTTAACTTAGAGCATCAAACCCTAGCTGCCTCACCTAGCCGGCGCCGATGGAAACCGACCGGAACCCTAGCTACTGTCTTTAACAGCACACAACACCTCCGGCGTGTTTGTGGTCGAAGTATCTGTTCCCGCCCGTCAGATCACCCTTTAGTCCACCCCAACCCAGACATTGTTCGTTGGCTTCGATCGCGGTTGTTCGGCGGGATCGTGGCAAAAGATCTGTGTGTTTGCGAGAGGATGGAGATGAAAATGGGAAGAGAGTGGAGCGAGGGAGTGAGGGAGTAG Coding sequence (CDS) ATGGGCAGTTTTAACTTAGAGCATCAAACCCTAGCTGCCTCACCTAGCCGGCGCCGATGGAAACCGACCGGAACCCTAGCTACTGTCTTTAACAGCACACAACACCTCCGGCGTGTTTGTGGTCGAAGTATCTGTTCCCGCCCGTCAGATCACCCTTTAGTCCACCCCAACCCAGACATTGTTCGTTGGCTTCGATCGCGGTTGTTCGGCGGGATCGTGGCAAAAGATCTGTGTGTTTGCGAGAGGATGGAGATGAAAATGGGAAGAGAGTGGAGCGAGGGAGTGAGGGAGTAG Protein sequence MGSFNLEHQTLAASPSRRRWKPTGTLATVFNSTQHLRRVCGRSICSRPSDHPLVHPNPDIVRWLRSRLFGGIVAKDLCVCERMEMKMGREWSEGVRE
Homology
BLAST of IVF0004613 vs. ExPASy TrEMBL
Match: A0A0A0KC93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447730 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.3e-28 Identity = 73/110 (66.36%), Postives = 78/110 (70.91%), Query Frame = 0
Query: 1 MGSFNLEHQTLAASPSRRRWKPTGTLATVFNSTQHLRRVCGRSICSRPSDHPLVHPN--- 60
MGSFNLEHQTLAASPS+RRWKPTGTLATVFNS Q+LRRVCGRSI S SDHPLVHPN
Sbjct: 1 MGSFNLEHQTLAASPSQRRWKPTGTLATVFNSRQYLRRVCGRSIYSCLSDHPLVHPNRRL 60
Query: 61 --------PDIVRWLRSRL------FGGIVAKDLCVCERMEMKMGREWSE 94
DIVRWL SRL G+ + + CE MEMKMGREW E
Sbjct: 61 GSPFVVVFGDIVRWLCSRLKSVRGCSAGLWQRSV-FCEGMEMKMGREWRE 109
BLAST of IVF0004613 vs. NCBI nr
Match: KGN45411.1 (hypothetical protein Csa_016605 [Cucumis sativus]) HSP 1 Score: 132 bits (333), Expect = 8.13e-38 Identity = 73/110 (66.36%), Postives = 78/110 (70.91%), Query Frame = 0
Query: 1 MGSFNLEHQTLAASPSRRRWKPTGTLATVFNSTQHLRRVCGRSICSRPSDHPLVHPNP-- 60
MGSFNLEHQTLAASPS+RRWKPTGTLATVFNS Q+LRRVCGRSI S SDHPLVHPN
Sbjct: 1 MGSFNLEHQTLAASPSQRRWKPTGTLATVFNSRQYLRRVCGRSIYSCLSDHPLVHPNRRL 60
Query: 61 ---------DIVRWLRSRL------FGGIVAKDLCVCERMEMKMGREWSE 93
DIVRWL SRL G+ + + CE MEMKMGREW E
Sbjct: 61 GSPFVVVFGDIVRWLCSRLKSVRGCSAGLWQRSV-FCEGMEMKMGREWRE 109
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0KC93 | 3.3e-28 | 66.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447730 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN45411.1 | 8.13e-38 | 66.36 | hypothetical protein Csa_016605 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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