
IVF0004544 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATTTTGGTGTGAGGTGCACGTGCACTTAATCATGGTGTGTATATATACACATATACATACCCTCTAATACGGAGTCTTCAGTCTTCGGCTGTGTATTTAAAAGCCTTTCGAAGAAGAAAGACCCCCTCGACTTTCTTCCAACTTCGTTCTAAAATGGTGAGAATAAGCAAAGCCCTTCTGAAAGAAGCCAGCTCCGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAGCCTCTAAGGTCATCGTTCCATTTCGATTCCATCATTTTCAATCATTCTCCTCAATCTGTGGTGCACAATTTGGTTTGATTTTCTGTTCTTTTTTTTTTTTTTTTCCTTTCATTAGGTATTGTGAGGCGTCGAATTCTCTTATCAGCGATACGATTGGTGTTTCTTTCCCTGTAAGTATCAGCTTGAATTCTGTAAAAATTTGTACTCCGGTATAATTCTTCATCTCTGACCATTAGCGCTCTGGTTCTTCTTTTAGATCGTCTAGGCTGCTGTAGCTGGTTTGTTTTATGAAGTATTTCTCAATTTTGGTAGGTTAGGTAGTAAAAGTGGTTGTAGGGATCAGCATCTAGTGTTGAAACCTTTGCTATTTTTCTTTTTCTTTTCTCTCTCCTGGTTGGTATGCCTTTAATCCATCACCACGAATGACCAAGCAAGCCTAGGGTTCAGGGAGGTATTCATATCATATGTTATTTACGCCTAGCGTTTAGAGTTGTGACATATATAAACTCTCTGATGTAATGACGCCTCTTTATTATATGATATGAATAAACTGCTCTCTTTTGCTCAAAGAGATAAGTAGCATAATGTTAGTGAAGTGCATAGATTTATATGTTGATGGTTGTTATATACACTTTCTTGTTTTCTTTATTTGTCTGTTTTATAACACCCCTCGTTTAGGGGAGTTAGGTTATAGGACATCTGTTTGTTGTATGTTGTAATTTTGCATACTGTTGTGTTAGATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATCGAAAATGATGATGCATTGAAAGGTGAGGATACTGTTGAGATTACTCCAGAAAAATGAGCGCTGGTTTGTTTGGGGGTGGAAGACAATTTTTTATTTCTTGAGCTCAATAATGAGAAGAGATGTCAACACAACGCCACAACACTTCACACTTGTATTTTTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTGCCTGTTGTTGCCCAATAATAGTCAGATTAGACCACTTGTCCACAATTCTTTTTTAGGGTGATTTGAAATTGTTAAACAAGAGAATATCCTCGAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTAATTTGAAAAGTTGCTGGTTTCACC TTATTTTGGTGTGAGGTGCACGTGCACTTAATCATGGTGTGTATATATACACATATACATACCCTCTAATACGGAGTCTTCAGTCTTCGGCTGTGTATTTAAAAGCCTTTCGAAGAAGAAAGACCCCCTCGACTTTCTTCCAACTTCGTTCTAAAATGGTGAGAATAAGCAAAGCCCTTCTGAAAGAAGCCAGCTCCGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAGCCTCTAAGGTATTGTGAGGCGTCGAATTCTCTTATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATCGAAAATGATGATGCATTGAAAGGTGAGGATACTGTTGAGATTACTCCAGAAAAATGAGCGCTGGTTTGTTTGGGGGTGGAAGACAATTTTTTATTTCTTGAGCTCAATAATGAGAAGAGATGTCAACACAACGCCACAACACTTCACACTTGTATTTTTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTGCCTGTTGTTGCCCAATAATAGTCAGATTAGACCACTTGTCCACAATTCTTTTTTAGGGTGATTTGAAATTGTTAAACAAGAGAATATCCTCGAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTAATTTGAAAAGTTGCTGGTTTCACC ATGGTGAGAATAAGCAAAGCCCTTCTGAAAGAAGCCAGCTCCGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAGCCTCTAAGGTATTGTGAGGCGTCGAATTCTCTTATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATCGAAAATGATGATGCATTGAAAGGTGAGGATACTGTTGAGATTACTCCAGAAAAATGA MVRISKALLKEASSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALKGEDTVEITPEK Homology
BLAST of IVF0004544 vs. ExPASy Swiss-Prot
Match: Q5M8Z2 (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-12 Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy Swiss-Prot
Match: Q5U1Z8 (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-09 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy Swiss-Prot
Match: Q96I23 (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.8e-09 Identity = 26/58 (44.83%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy Swiss-Prot
Match: Q2T9V7 (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 6.5e-09 Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy Swiss-Prot
Match: Q9D1C3 (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 8.5e-09 Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy TrEMBL
Match: A0A5A7SJZ8 (UPF0434 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001030 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy TrEMBL
Match: A0A1S3B2Q6 (UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 6.2e-39 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy TrEMBL
Match: A0A0A0KHC1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.9e-37 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy TrEMBL
Match: A0A6J1GDI4 (uncharacterized protein LOC111453193 OS=Cucurbita moschata OX=3662 GN=LOC111453193 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.3e-32 Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of IVF0004544 vs. ExPASy TrEMBL
Match: A0A6J1IIE0 (uncharacterized protein LOC111477769 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477769 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31 Identity = 72/86 (83.72%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of IVF0004544 vs. NCBI nr
Match: XP_008440859.1 (PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo] >KAA0025649.1 UPF0434 protein [Cucumis melo var. makuwa] >TYK12522.1 UPF0434 protein [Cucumis melo var. makuwa]) HSP 1 Score: 168 bits (425), Expect = 2.41e-52 Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of IVF0004544 vs. NCBI nr
Match: XP_011658060.1 (uncharacterized protein LOC101219142 [Cucumis sativus] >KGN48943.1 hypothetical protein Csa_003028 [Cucumis sativus]) HSP 1 Score: 160 bits (406), Expect = 1.91e-49 Identity = 81/86 (94.19%), Postives = 83/86 (96.51%), Query Frame = 0
BLAST of IVF0004544 vs. NCBI nr
Match: XP_038883681.1 (UPF0434 protein Ecaj_0131 [Benincasa hispida]) HSP 1 Score: 154 bits (389), Expect = 7.50e-47 Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of IVF0004544 vs. NCBI nr
Match: XP_022949957.1 (uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 uncharacterized protein LOC111804007 [Cucurbita pepo subsp. pepo] >KAG7034074.1 hypothetical protein SDJN02_03801 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (367), Expect = 1.70e-43 Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of IVF0004544 vs. NCBI nr
Match: XP_022977422.1 (uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]) HSP 1 Score: 143 bits (361), Expect = 1.40e-42 Identity = 72/86 (83.72%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of IVF0004544 vs. TAIR 10
Match: AT4G35905.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 1.9e-24 Identity = 51/76 (67.11%), Postives = 65/76 (85.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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