IVF0004536 (gene) Melon (IVF77) v1

Overview


Name	IVF0004536
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NADH:ubiquinone reductase (H(+)-translocating)
Location	chr02: 19949212 .. 19951583 (+)
RNA-Seq Expression	IVF0004536
Synteny	IVF0004536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTTATAAAGGGTGGTGAAAATTCTTCTAACTGGTTGAGTCACAAGGCTAGGTGAAGGGACAAGCGAGGGTACACTTGAGAGAGAGAGAGTTTGAAGGAAGAGAAGCGGAGAAATTCGAGCAGAGCGACAATGGGTGGAGGAATGGGAGCTCACAAGAACAAATTTATTGAGGATTGGAGTACTGCCAGAGAAAATCTTGAGTATAACTTCCGCTGGACTCGCCGGAATTTAGCGATTGTGGGTATCTTCGGAATCGCCGTTCCCTATCTTGTTTACAAGGGCATCGTCAGAGAATTTGTAATATCATTTCTCTCCATCTTTTTCTTCCTTTAGTATGTCGTTTGATTTATTTTCTATCTTTTTGTTTTGTGATCCGTTGACGCCCAGAGTGTGCGTCAATCTGGGGTAAATTTTTTCTTTTTTAGGGTTTCCAATTTTTGAGTATGTTTTCTGACTCTGGATTCCTTTATTGTTTATTAGTGAAGTTGTTGGTCTTAATTTTGGCCTGGATGATTTTGCAATTGGTCAATTTTTTTTTTCCTTTCATTCGATTGTTCATATTTTTGCTTTTCGTTACGATTTAAATACGGGTTGGAGAATACAATTTTTGATTCATTTTGTGAATATTGGTTGGCAGTAATTTGTAGCATTTTTTCTTTCATTTTTAAAATGATAGATTTGAGTTGCTTTTTCAGTTTACTGCTCAAAGTATGTTCCCTTGATTGGCTGCGTCTACTCTCTGGAAGTGCTATGTTTTAAATCTTCTATGTTGAGGATTACACATTTAGAAAATTGAGGGGACTTCGCAATGTTTTGTTTAGTTTGTGTTTTTTGTATCCACACACTGGATGTGTGACCCAACAAATTACAAAAAAAGGACAACTAATATAAATTTGGGTTGAGAGTATAATTACAAACTAATTTAGAAGGGGGAAAGTAGAAGCAAAAAGAGCCATTGTTAGCTTCTTGGTCACCAAAGTTTTAGACTTTCTTTCGAACCACCTTTCAAAGGAGGGCGAAGATCATATTGGATCAAAGAGTTCTCACCTTGGCATTTTAAATGAGGACCTTCGACTAACTCTAAAAGGGGCATATGAAGCGATTTATGTTTATATAATACATAGGCTACCCTTCTCATTGCAAGTTGGTTTTGAGATGCAACAATGTTGTCTAACATGCCATTGCCAATTGTTTTTGAAATGGAAGCCTACTTTATCAAACTTTCTATCTTTGTAAGACTTCCATTACCTAAAGAAAAATGGGCAAAGAAAAGGGAGACGGGAAGGCTGGTCCTACATTCATGAGGGTGGATTGGAAAAAATCCTATTGTTTTTACATTGGTTGAGTTAGATAAAATCAATTTCTTGTCGATAGTTTGAATCAGGAAAGGACGGTTTTGAAGTTCAATTTTTTGTGTTAATTTGAGCCAGTTTAGTGGTCTAAGGAATCTACTCCTTCCTTTGAGGATACATGGTGTGTTCTGACTCCACCCTCACTTTTATTGAACTTGAAAATTGTTGGGATATTTCGTGGTAATAAAATAAAAGGTGAGGAATTTATGTGTGGATGGGGAGTTCAAATGTGAACTTTAGATTTCTGGTTATGAGATGTTTTTGGAGGATCACCCATGATGATATTTGTTTTACAGTCTAATGGAAATAATGCTTCCATAGTTATCAGAAACCTTTGTTGGAGGAAATAGAACTTGTGTCCATATCCAGCCATTATAGGATATTATGGATGTTGGTGGTCCGACCCGTCCCCCAGCGTTCGTTTTTCTTCTCATTCTAGTTTCTTTTTCATAAATATTTGCATGCAGTTTTCATTTGTTATTCTTCATTTATATTACTTTTTCTTCCAATTATTAAGCACCCACTGTCTATAATTTTCATTGTGCAGCGCACTCTTTAACGAGCTTTCTTCTAAAAGATAACTTGGTTTATAACATTTTGATGACAGCATATGCAAGATGAGGATGCAGGCAGACCATACCGGAAGTTCTTTTAAGCACCTCATCAAGGCGCGGCAATCAGTGTTTTTAAGTAATAAAACCTTTCTCATCTATGTGAACACTCAACCCTTCCAATTTGGATGGATTATGAGACAATATTGATCTGTGCAAGTTTATGACACTTTGTGAATGCTGAGTATTTTCATTTTGAAGTTCTGCCTTTCAAATTAATCCTCAATACAGACCATTGTTGGTTTTGTTTTTGTTCTTTTTTCTTAACATGGGGTGTTGTTGGGAGAAGCCCTTCAACTTTATGCTTTTTATATATAATATATATATAGAGTGTCAAATAATGAAATACCAATGATTGTAATTAGCTTCGTGGTAAATGCATATCTCAGCTCCTCTTTGGTTCAA

mRNA sequence

CTAATTTATAAAGGGTGGTGAAAATTCTTCTAACTGGTTGAGTCACAAGGCTAGGTGAAGGGACAAGCGAGGGTACACTTGAGAGAGAGAGAGTTTGAAGGAAGAGAAGCGGAGAAATTCGAGCAGAGCGACAATGGGTGGAGGAATGGGAGCTCACAAGAACAAATTTATTGAGGATTGGAGTACTGCCAGAGAAAATCTTGAGTATAACTTCCGCTGGACTCGCCGGAATTTAGCGATTGTGGGTATCTTCGGAATCGCCGTTCCCTATCTTGTTTACAAGGGCATCGTCAGAGAATTTCATATGCAAGATGAGGATGCAGGCAGACCATACCGGAAGTTCTTTTAAGCACCTCATCAAGGCGCGGCAATCAGTGTTTTTAAGTAATAAAACCTTTCTCATCTATGTGAACACTCAACCCTTCCAATTTGGATGGATTATGAGACAATATTGATCTGTGCAAGTTTATGACACTTTGTGAATGCTGAGTATTTTCATTTTGAAGTTCTGCCTTTCAAATTAATCCTCAATACAGACCATTGTTGGTTTTGTTTTTGTTCTTTTTTCTTAACATGGGGTGTTGTTGGGAGAAGCCCTTCAACTTTATGCTTTTTATATATAATATATATATAGAGTGTCAAATAATGAAATACCAATGATTGTAATTAGCTTCGTGGTAAATGCATATCTCAGCTCCTCTTTGGTTCAA

Coding sequence (CDS)

ATGGGTGGAGGAATGGGAGCTCACAAGAACAAATTTATTGAGGATTGGAGTACTGCCAGAGAAAATCTTGAGTATAACTTCCGCTGGACTCGCCGGAATTTAGCGATTGTGGGTATCTTCGGAATCGCCGTTCCCTATCTTGTTTACAAGGGCATCGTCAGAGAATTTCATATGCAAGATGAGGATGCAGGCAGACCATACCGGAAGTTCTTTTAA

Protein sequence

MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQDEDAGRPYRKFF

Homology

[Close]

BLAST of IVF0004536 vs. ExPASy TrEMBL
Match: A0A1S3BVW2 (uncharacterized protein LOC103494207 OS=Cucumis melo OX=3656 GN=LOC103494207 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.9e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD
Sbjct: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 72
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. ExPASy TrEMBL
Match: A0A0A0LPS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025860 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.2e-33
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKNKFIEDWSTARENLE NFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNKFIEDWSTARENLELNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 72
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. ExPASy TrEMBL
Match: A0A218XWT9 (uncharacterized protein LOC116198173 OS=Punica granatum OX=22663 GN=LOC116198173 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-31
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKN+FIEDWSTARENLE+NFRWTRRNLA+VGIFGIA+P LVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNRFIEDWSTARENLEHNFRWTRRNLALVGIFGIAIPVLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKF 71
          EDAGRPYRKF
Sbjct: 61 EDAGRPYRKF 70

[Close]

BLAST of IVF0004536 vs. ExPASy TrEMBL
Match: A0A6J1E6W7 (uncharacterized protein LOC111429971 OS=Cucurbita moschata OX=3662 GN=LOC111429971 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-31
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKNKFIEDWS+ARENLE+NFRWTRRN A+VG+FGIAVP LVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNKFIEDWSSARENLEHNFRWTRRNFALVGLFGIAVPLLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 72
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. ExPASy TrEMBL
Match: A0A6J1JDA5 (uncharacterized protein LOC111485748 OS=Cucurbita maxima OX=3661 GN=LOC111485748 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.8e-31
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKN+FIEDWS+ARENLE+NFRWTRRN A+VG+FGIAVP LVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNRFIEDWSSARENLEHNFRWTRRNFALVGLFGIAVPLLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 72
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. NCBI nr
Match: XP_008453524.1 (PREDICTED: uncharacterized protein LOC103494207 [Cucumis melo])

HSP 1 Score: 154 bits (389), Expect = 2.58e-47
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD
Sbjct: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 71
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. NCBI nr
Match: XP_011649322.1 (uncharacterized protein LOC101206025 [Cucumis sativus] >KGN63905.1 hypothetical protein Csa_014246 [Cucumis sativus])

HSP 1 Score: 148 bits (373), Expect = 7.15e-45
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKNKFIEDWSTARENLE NFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNKFIEDWSTARENLELNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 71
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. NCBI nr
Match: XP_022921830.1 (uncharacterized protein LOC111429971 [Cucurbita moschata] >KAG6589656.1 hypothetical protein SDJN03_15079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (356), Expect = 2.81e-42
Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKNKFIEDWS+ARENLE+NFRWTRRN A+VG+FGIAVP LVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNKFIEDWSSARENLEHNFRWTRRNFALVGLFGIAVPLLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 71
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. NCBI nr
Match: XP_031384382.1 (uncharacterized protein LOC116198173 [Punica granatum] >OWM89248.1 hypothetical protein CDL15_Pgr010535 [Punica granatum] >PKI59873.1 hypothetical protein CRG98_019755 [Punica granatum])

HSP 1 Score: 141 bits (356), Expect = 2.81e-42
Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM AHKN+FIEDWSTARENLE+NFRWTRRNLA+VGIFGIA+P LVYKGIVREFHMQD
Sbjct: 1  MGGGMEAHKNRFIEDWSTARENLEHNFRWTRRNLALVGIFGIAIPVLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKF 70
          EDAGRPYRKF
Sbjct: 61 EDAGRPYRKF 70

[Close]

BLAST of IVF0004536 vs. NCBI nr
Match: XP_038878542.1 (uncharacterized protein LOC120070743 [Benincasa hispida])

HSP 1 Score: 141 bits (355), Expect = 4.00e-42
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM  HKN+FIEDWSTARENLE+NFRWTRRN AIVG+FGIAVP LVYKGIVREFHMQD
Sbjct: 1  MGGGMETHKNRFIEDWSTARENLEHNFRWTRRNFAIVGLFGIAVPLLVYKGIVREFHMQD 60

Query: 61 EDAGRPYRKFF 71
          EDAGRPYRKFF
Sbjct: 61 EDAGRPYRKFF 71

[Close]

BLAST of IVF0004536 vs. TAIR 10
Match: AT2G31490.1 (unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-30
Identity = 55/70 (78.57%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 1  MGGGMGAHKNKFIEDWSTARENLEYNFRWTRRNLAIVGIFGIAVPYLVYKGIVREFHMQD 60
          MGGGM  +KNKFIEDW +ARENLE+NFRWTRRN A++GIFGIA+P +VYKGIV++FHMQD
Sbjct: 1  MGGGMETNKNKFIEDWGSARENLEHNFRWTRRNFALIGIFGIALPIIVYKGIVKDFHMQD 60

Query: 61 EDAGRPYRKF 71
          EDAGRP+RKF
Sbjct: 61 EDAGRPHRKF 70

The following BLAST results are available for this feature:

BLAST of IVF0004536 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004536 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BVW2	5.9e-35	100.00	uncharacterized protein LOC103494207 OS=Cucumis melo OX=3656 GN=LOC103494207 PE=...	[more]
A0A0A0LPS8	4.2e-33	97.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025860 PE=4 SV=1	[more]
A0A218XWT9	3.9e-31	91.43	uncharacterized protein LOC116198173 OS=Punica granatum OX=22663 GN=LOC116198173...	[more]
A0A6J1E6W7	3.9e-31	90.14	uncharacterized protein LOC111429971 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JDA5	8.8e-31	88.73	uncharacterized protein LOC111485748 OS=Cucurbita maxima OX=3661 GN=LOC111485748...	[more]

BLAST of IVF0004536 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453524.1	2.58e-47	100.00	PREDICTED: uncharacterized protein LOC103494207 [Cucumis melo]	[more]
XP_011649322.1	7.15e-45	97.18	uncharacterized protein LOC101206025 [Cucumis sativus] >KGN63905.1 hypothetical ...	[more]
XP_022921830.1	2.81e-42	90.14	uncharacterized protein LOC111429971 [Cucurbita moschata] >KAG6589656.1 hypothet...	[more]
XP_031384382.1	2.81e-42	91.43	uncharacterized protein LOC116198173 [Punica granatum] >OWM89248.1 hypothetical ...	[more]
XP_038878542.1	4.00e-42	90.14	uncharacterized protein LOC120070743 [Benincasa hispida]	[more]

BLAST of IVF0004536 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31490.1	1.1e-30	78.57	unknown protein; Has 55 Blast hits to 55 proteins in 15 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35479:SF6	BNAA05G11280D PROTEIN	coord: 1..70
None	No IPR available	PANTHER	PTHR35479	UNNAMED PRODUCT	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004536.1	IVF0004536.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0016491	oxidoreductase activity