IVF0004501 (gene) Melon (IVF77) v1

Overview


Name	IVF0004501
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CASP-like protein
Location	chr09: 5182914 .. 5184687 (-)
RNA-Seq Expression	IVF0004501
Synteny	IVF0004501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCATAAAAATTTCTGAGAAAAGAAGGAAAAGAATGGCTTCAAAGGGTTTAAGAATTGCTTCTCTTATTTTGAGAATTTTAACCTTTATTTTCATATTTATTTCTCTCTTAATTGTTGCTACCAACTCTAAAACTGCTTTCAAAGGGACTGAGCTCGAAAAAAAAGTTGATTTCAGTGATTTTAATTCGTATAGGTAAGTCCTTTATTTCTTTTTTTTTTTTGTTTTATTATTATTATTATGTTGTAATTAATTAAGCGTGGTTTGAATTTAAATGTGTCACAGGTATTTGATAGCAGTTACTGTTATAGGAGGTGCTTTAAGTCTCCTTCAAATTGCTTTCAACATTTACCATCTTATTACTAAGGGCGAGGGAACTCCACTTTTCTATGTGTTCAGCGATCATGTGATCATCATACTCTTTTCATTCTAACTTTCTTTCACTTTCTAACTACACTTCAATTAATTAAATGGTTTGGATTAAGTACAATTTGTTCTAGATCAGCCCAAATATTTTGAAAATCTCCAAAGTTTTTAACCCAACTTAATTTGGTTGTAGGGTTTTTTTTTTAATTCTTAAATTCATCTACATTAAAGCATGTGTCTTATAATTAAAATTTCATACAACTCAAATGTTAAATATCTAATAATATACATGATAATTATTACAAATTTTAAACAAAGACATATTTATAAAAGAAAATAATTAAAAATTTACGAATTTATCGATCTCAGAGTAAACAACATACTTTTTAGAGAAATTTTCAAATATAGAAAATTGACAAAATATATTAGCATTTCATAGAAAAATCAAGTACAATAAATATTACCTTTTATGATTTTTTCTATTGAGTATAGAAACTGTTTTTTATTTTTGAAAAATCTTTTTTAATATTTAAAATATAAATAATTTAGGTTTAGTTGGGTCAACCCCTAAAAAGTTAGTCAACCCAAGAAAGTAAACTCCACCCAAGCAAATAATAGAACATAAACTCAATAACGACCCAACCCTCGTGAGTTTGAGTTGTCCCTGTCATTTTCCTTTTGTTAATCTTTCCAATAGAGTTAATTAGATTTTGCTTTAGTTACATGGATTTTACGTTTGAGATAGGGAGGAAAAAAGAAAGAAAAGAACAATATCATAGAAGAAAACGAAAAAGAGAACAAGAAATAAATGCTCGAGCTGGGTTCGTGGTGACCTTTTTGTTGGTTTGAAATATTAGATTTAGGGACACACAATAGGAATTTTACTTGGTAAACAGCGCTATCAGTAAAAATATGGTGAAACCTCACAAATTTTCAACTAGTGGTTCCTATTGAGGATGGATACATTCCACCTCCCAACTTTTATAAGATATAGACGTGTAATTTTTCTTATTATCAACTGGTTTAGATGTTTTGATGTTTTTGTACGTGCAGTTGTTAGCGTACCTTTTATTATCGGCCGCATCAGCGGGACTAGGAGCGGGGATCGACTTGAGAGTGAATGTTAAACTGCTGCTTGAGGACGATTATTACAACTCATTTTTTGACAAAGGCAATGCTGGATCTGCTATTCTTCTCCTTGCATTTATCTGTTCTGCCATTGTTTCAGTTCTCTCTTCTTTGGCTCTCATTAGAAAGCCTGTTTGATTCATAATCATTTCTTCTAAACTTCTCTCTCTGTCATCTTTAAATTAAACCTCTTCAATTTGTTTAATTGTGTTAGACATTTTTCTTTTTCTTTTTTCTTTTTTTAAGTGTTATGGAAGTGCATTAATTTATTGACTAGTG

mRNA sequence

ACTTCATAAAAATTTCTGAGAAAAGAAGGAAAAGAATGGCTTCAAAGGGTTTAAGAATTGCTTCTCTTATTTTGAGAATTTTAACCTTTATTTTCATATTTATTTCTCTCTTAATTGTTGCTACCAACTCTAAAACTGCTTTCAAAGGGACTGAGCTCGAAAAAAAAGTTGATTTCAGTGATTTTAATTCGTATAGGTATTTGATAGCAGTTACTGTTATAGGAGGTGCTTTAAGTCTCCTTCAAATTGCTTTCAACATTTACCATCTTATTACTAAGGGCGAGGGAACTCCACTTTTCTATGTGTTCAGCGATCATTTGTTAGCGTACCTTTTATTATCGGCCGCATCAGCGGGACTAGGAGCGGGGATCGACTTGAGAGTGAATGTTAAACTGCTGCTTGAGGACGATTATTACAACTCATTTTTTGACAAAGGCAATGCTGGATCTGCTATTCTTCTCCTTGCATTTATCTGTTCTGCCATTGTTTCAGTTCTCTCTTCTTTGGCTCTCATTAGAAAGCCTGTTTGATTCATAATCATTTCTTCTAAACTTCTCTCTCTGTCATCTTTAAATTAAACCTCTTCAATTTGTTTAATTGTGTTAGACATTTTTCTTTTTCTTTTTTCTTTTTTTAAGTGTTATGGAAGTGCATTAATTTATTGACTAGTG

Coding sequence (CDS)

ATGGCTTCAAAGGGTTTAAGAATTGCTTCTCTTATTTTGAGAATTTTAACCTTTATTTTCATATTTATTTCTCTCTTAATTGTTGCTACCAACTCTAAAACTGCTTTCAAAGGGACTGAGCTCGAAAAAAAAGTTGATTTCAGTGATTTTAATTCGTATAGGTATTTGATAGCAGTTACTGTTATAGGAGGTGCTTTAAGTCTCCTTCAAATTGCTTTCAACATTTACCATCTTATTACTAAGGGCGAGGGAACTCCACTTTTCTATGTGTTCAGCGATCATTTGTTAGCGTACCTTTTATTATCGGCCGCATCAGCGGGACTAGGAGCGGGGATCGACTTGAGAGTGAATGTTAAACTGCTGCTTGAGGACGATTATTACAACTCATTTTTTGACAAAGGCAATGCTGGATCTGCTATTCTTCTCCTTGCATTTATCTGTTCTGCCATTGTTTCAGTTCTCTCTTCTTTGGCTCTCATTAGAAAGCCTGTTTGA

Protein sequence

MASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTVIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLLLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKPV

Homology

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BLAST of IVF0004501 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-22
Identity = 64/158 (40.51%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 7   RIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTVIGGAL 66
           R+A+LILRILTFIF+  SL+I+ TN+ T  +   +E KV F D  +YRY++A  VIG A 
Sbjct: 11  RMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVIGLAY 70

Query: 67  SLLQIAFNIYHLIT-----KGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLL 126
           ++LQIAF +Y++ T      G+G   F  F D +++Y+L++ A+AG  +  D++    + 
Sbjct: 71  TVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIK---PVF 130

Query: 127 LEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLAL 160
                +++F +KG A +++LL+ F+C+A++SV SS AL
Sbjct: 131 SGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of IVF0004501 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-20
Identity = 61/166 (36.75%), Postives = 103/166 (62.05%), Query Frame = 0


Query: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTV 61
           +S G R   L+LR+LTF+F+ I+L+++A   +T     E   ++ F+D  +YRY+I+  +
Sbjct: 13  SSTGSRTVLLLLRVLTFVFLLIALILIAIVKQT---DDETGVEIKFNDIYAYRYMISTII 72

Query: 62  IGGALSLLQIAFNIYHLIT-----KGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRV 121
           IG A +LLQ+A +I+ +++      G+G  LF  F D +++YLL+S ++AG G  ++L  
Sbjct: 73  IGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGR 132

Query: 122 NVKLLLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRK 163
            V         NSF DK NA +++LL+AF+ +A+ S  +S AL +K
Sbjct: 133 GVP-------SNSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of IVF0004501 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 4.1e-20
Identity = 64/162 (39.51%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 7   RIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTVIGGAL 66
           R+ +L LR+LTF F+ +SL+I+ TN+ T   G + E KV   DF SYRY++A    G   
Sbjct: 20  RMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAIAFGLTY 79

Query: 67  SLLQIAFNIYHLI------TKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKL 126
           ++LQIA  + H+       T G+G  +F  + D +++Y+L + A+A  GA  +L+  +  
Sbjct: 80  TILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLAG 139

Query: 127 LLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRK 163
           L  D     FF+KG A +++LLL F+C+AI+SV SS AL +K
Sbjct: 140 LGGD----KFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of IVF0004501 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17
Identity = 62/157 (39.49%), Postives = 91/157 (57.96%), Query Frame = 0


Query: 10  SLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTVIGGALSLL 69
           SLI+RILT I + IS +++ATN++T       + K+ F DF +YRYLIA  +IG A +LL
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTV-STVAGDVKIKFKDFYAYRYLIATVIIGMAYTLL 73

Query: 70  QIAFNIYHLIT----KGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLLLEDD 129
           QIAF+I  L T     GEG  LF  + D  ++Y L++ A+A  G   DL    K L   D
Sbjct: 74  QIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDL----KQLEGSD 133

Query: 130 YYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRK 163
            Y+ F +  NA +++ L+ F  +   S+ SS  L ++
Sbjct: 134 NYSKFLNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of IVF0004501 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.2e-17
Identity = 60/165 (36.36%), Postives = 100/165 (60.61%), Query Frame = 0


Query: 6   LRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTVIGGA 65
           LR   L+LR+LT  F+ I++++++TN+ T  + +    K+ F+D  +YRY+++  VIG  
Sbjct: 13  LRTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLV 72

Query: 66  LSLLQIAFNIYHLITKGEGTPLFYVF---SDHLLAYLLLSAASAGLGAGIDLRVNVKLLL 125
            +++Q+   I    T G+  PL Y F    D +++YLL + ++AG G   DL+     L+
Sbjct: 73  YAVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALI 132

Query: 126 E---DDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKPV 165
           E    D  + FF KG A +++LL AF+  A++SV SSLAL ++PV
Sbjct: 133 EFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPV 175

[Close]

BLAST of IVF0004501 vs. ExPASy TrEMBL
Match: A0A0A0KS88 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62
Identity = 134/164 (81.71%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVT 60
           MASKGLRIAS+ILRILTFIFIFISLLIVATN+KT +K T  E KV FSD NSYRY++A T
Sbjct: 1   MASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT 60

Query: 61  VIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKL 120
           VIGGAL LLQIAFNIYHL+TK EGTPLFY+FSD LL YLLLSAASAGLG+GIDLR N+K+
Sbjct: 61  VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV 120

Query: 121 LLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKPV 165
           L++ D Y+SFFDKGNAGSAIL LAFICSAIVSVLSSLALI+KPV
Sbjct: 121 LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV 164

[Close]

BLAST of IVF0004501 vs. ExPASy TrEMBL
Match: A0A0A0KNU7 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.7e-56
Identity = 130/162 (80.25%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MASKGLRIASLILRILTFIFIFISLLIVATNSKTA-FKGTELEKKVDFSDFNSYRYLIAV 60
           MASKGLRIASLILR LTFI  FISLLIVATNSKT    GT  E KV F++  SYRYL+A 
Sbjct: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60

Query: 61  TVIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVK 120
            VIGGALSLLQI FNIYHLIT GEGTPLFY+FSD LL YLLLS ASAGLGAGIDLRVN+K
Sbjct: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120

Query: 121 LLLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIR 162
            LLE  Y+NSFFDK NAGSAILLLAF+C+AIVSVLSSLALIR
Sbjct: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of IVF0004501 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.2e-52
Identity = 118/162 (72.84%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTV 61
           ASKG RIASLILRILTF+ IFISLLI+ATNSKT  KGTE E KV+F D  SYRYL A  V
Sbjct: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAV 62

Query: 62  IGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLL 121
           IG ALSLLQIA  +YH++TK +GTP F +FSD LL YLLLS ASAGLGAGIDLR N K L
Sbjct: 63  IGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDL 122

Query: 122 LEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKP 164
           +  + +NSFFDKG+A +AILLLAFICSA+VS+LSSLAL+RKP
Sbjct: 123 V-GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of IVF0004501 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-48
Identity = 108/162 (66.67%), Postives = 135/162 (83.33%), Query Frame = 0


Query: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTV 61
           ASKG RIASLILRILTFI IFISL+I ATNSKT  KGTE E K++F +  SYRYLIA  V
Sbjct: 3   ASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAAAV 62

Query: 62  IGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLL 121
           IGG LSL+QI  +IYH++TK EGTPLFY+FSD+LL+YLLLS++SA LGAGID+R N+K L
Sbjct: 63  IGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLKEL 122

Query: 122 LEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKP 164
                ++SFFD+G+  +A+L +AF+C+A+VS+LS+LALIRKP
Sbjct: 123 F-GTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of IVF0004501 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.4e-47
Identity = 107/162 (66.05%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTV 61
           ASKG RIA+LILRILT I IFISL+I A+NSKT  KGTE E K++F +  SYRYLIA  V
Sbjct: 3   ASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAAAV 62

Query: 62  IGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLL 121
           IGG LSL+QI  +IYH++TK EGTPLFY+FSD+LL+YLLLS++SA LGAGID R N+K L
Sbjct: 63  IGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLKEL 122

Query: 122 LEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKP 164
                ++SFFD+G+  +A+LL+AFIC+A+VS+LS+LALIRKP
Sbjct: 123 F-GTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of IVF0004501 vs. NCBI nr
Match: XP_004142753.1 (CASP-like protein 4D1 [Cucumis sativus] >KGN51297.1 hypothetical protein Csa_009093 [Cucumis sativus])

HSP 1 Score: 245 bits (625), Expect = 2.30e-80
Identity = 134/164 (81.71%), Postives = 148/164 (90.24%), Query Frame = 0


Query: 1   MASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVT 60
           MASKGLRIAS+ILRILTFIFIFISLLIVATN+KT +K T  E KV FSD NSYRY++A T
Sbjct: 1   MASKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAAT 60

Query: 61  VIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKL 120
           VIGGAL LLQIAFNIYHL+TK EGTPLFY+FSD LL YLLLSAASAGLG+GIDLR N+K+
Sbjct: 61  VIGGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKV 120

Query: 121 LLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKPV 164
           L++ D Y+SFFDKGNAGSAIL LAFICSAIVSVLSSLALI+KPV
Sbjct: 121 LVDGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKPV 164

[Close]

BLAST of IVF0004501 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 225 bits (574), Expect = 1.26e-72
Identity = 124/163 (76.07%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVT 60
           MASKG RIASLILRILTFI IF++LLI+ATNSKT  +GT  E K++F D NSYRYL+AV 
Sbjct: 1   MASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVA 60

Query: 61  VIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKL 120
           VIGGALSLLQIAF IYHL+TKG+GTPLF +FSD LL+YLLLS ASAGLGAGID+RVN K 
Sbjct: 61  VIGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKE 120

Query: 121 LLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKP 163
           L+ + ++NSFFDKG+A +AILLLAFIC+AIVS+LSSLALIRKP
Sbjct: 121 LVGN-FFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of IVF0004501 vs. NCBI nr
Match: KGN51298.1 (hypothetical protein Csa_008715 [Cucumis sativus])

HSP 1 Score: 225 bits (573), Expect = 1.79e-72
Identity = 130/162 (80.25%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MASKGLRIASLILRILTFIFIFISLLIVATNSKTAF-KGTELEKKVDFSDFNSYRYLIAV 60
           MASKGLRIASLILR LTFI  FISLLIVATNSKT    GT  E KV F++  SYRYL+A 
Sbjct: 1   MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 60

Query: 61  TVIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVK 120
            VIGGALSLLQI FNIYHLIT GEGTPLFY+FSD LL YLLLS ASAGLGAGIDLRVN+K
Sbjct: 61  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 120

Query: 121 LLLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIR 161
            LLE  Y+NSFFDK NAGSAILLLAF+C+AIVSVLSSLALIR
Sbjct: 121 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of IVF0004501 vs. NCBI nr
Match: XP_031741190.1 (CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 225 bits (573), Expect = 5.15e-72
Identity = 130/162 (80.25%), Postives = 138/162 (85.19%), Query Frame = 0


Query: 1   MASKGLRIASLILRILTFIFIFISLLIVATNSKTAF-KGTELEKKVDFSDFNSYRYLIAV 60
           MASKGLRIASLILR LTFI  FISLLIVATNSKT    GT  E KV F++  SYRYL+A 
Sbjct: 33  MASKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVAT 92

Query: 61  TVIGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVK 120
            VIGGALSLLQI FNIYHLIT GEGTPLFY+FSD LL YLLLS ASAGLGAGIDLRVN+K
Sbjct: 93  AVIGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIK 152

Query: 121 LLLEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIR 161
            LLE  Y+NSFFDK NAGSAILLLAF+C+AIVSVLSSLALIR
Sbjct: 153 ELLEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 194

[Close]

BLAST of IVF0004501 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 210 bits (535), Expect = 1.12e-66
Identity = 118/162 (72.84%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 2   ASKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTV 61
           ASKG RIASLILRILTF+ IFISLLI+ATNSKT  KGTE E KV+F D  SYRYL A  V
Sbjct: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAV 62

Query: 62  IGGALSLLQIAFNIYHLITKGEGTPLFYVFSDHLLAYLLLSAASAGLGAGIDLRVNVKLL 121
           IG ALSLLQIA  +YH++TK +GTP F +FSD LL YLLLS ASAGLGAGIDLR N K L
Sbjct: 63  IGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDL 122

Query: 122 LEDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKP 163
           + +  +NSFFDKG+A +AILLLAFICSA+VS+LSSLAL+RKP
Sbjct: 123 VGN-IFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of IVF0004501 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-18
Identity = 60/165 (36.36%), Postives = 100/165 (60.61%), Query Frame = 0


Query: 6   LRIASLILRILTFIFIFISLLIVATNSKTAFKGTELEKKVDFSDFNSYRYLIAVTVIGGA 65
           LR   L+LR+LT  F+ I++++++TN+ T  + +    K+ F+D  +YRY+++  VIG  
Sbjct: 13  LRTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLV 72

Query: 66  LSLLQIAFNIYHLITKGEGTPLFYVF---SDHLLAYLLLSAASAGLGAGIDLRVNVKLLL 125
            +++Q+   I    T G+  PL Y F    D +++YLL + ++AG G   DL+     L+
Sbjct: 73  YAVVQLFLTISQFAT-GKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALI 132

Query: 126 E---DDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRKPV 165
           E    D  + FF KG A +++LL AF+  A++SV SSLAL ++PV
Sbjct: 133 EFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPV 175

[Close]

BLAST of IVF0004501 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17
Identity = 60/164 (36.59%), Postives = 98/164 (59.76%), Query Frame = 0


Query: 6   LRIASLILRILTFIFIFISLLIVATNSKT-AFKGTELEKKVDFSDFNSYRYLIAVTVIGG 65
           L++  L+LR+LT +F+ I+L+I++TNS T   +G+ L  K  F D  +YRY+++  VIG 
Sbjct: 13  LKVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSAL--KFHFKDVYAYRYMLSAAVIGL 72

Query: 66  ALSLLQIAFNIYHLITKGEGTPLFY---VFSDHLLAYLLLSAASAGLGAGIDLRVNVKLL 125
             +++Q+ F I    T G   P  Y    + D L++YL+ + ++AG G   DL+     L
Sbjct: 73  VYAVIQLFFTISEFAT-GVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLAL 132

Query: 126 L---EDDYYNSFFDKGNAGSAILLLAFICSAIVSVLSSLALIRK 163
           +     D  + FF KG A +++LL AFIC A++SV SS A+ ++
Sbjct: 133 VALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of IVF0004501 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 41.2 bits (95), Expect = 9.4e-04
Identity = 35/130 (26.92%), Postives = 59/130 (45.38%), Query Frame = 0


Query: 23  ISLLIVATNSKTA-FKGTELEKKVDFSDFNSYRYLIAVTVIGGALSLLQIAFNIYHLITK 82
           +++++ AT    A   G +L    ++S   SY+Y++         SLLQ+   +Y L+T 
Sbjct: 39  MAVMLTATEEGVADIYGFKLTLSSNWSFSPSYQYVVGACAGTVLYSLLQLCLGVYRLVTG 98

Query: 83  GEGTPLFY-----VFSDHLLAYLLLSAASAGLGAGIDLRVNVKLLLEDDYYNSFFDKGNA 142
              TP  +       SD L  YL++SA SAG G     +  ++     D+  +     N 
Sbjct: 99  SPITPSRFQAWLCFTSDQLFCYLMMSAGSAGSGVTNLNKTGIRHTPLPDFCKTLSSFCNH 158

Query: 143 GSAILLLAFI 147
            +  LLL F+
Sbjct: 159 VALSLLLVFL 168

The following BLAST results are available for this feature:

BLAST of IVF0004501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	9.7e-22	40.51	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	2.4e-20	36.75	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9NBE5	4.1e-20	39.51	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
A1XGB4	2.5e-17	39.49	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
Q8GWD5	7.2e-17	36.36	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]

BLAST of IVF0004501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS88	1.5e-62	81.71	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KNU7	1.7e-56	80.25	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515030 PE=3 SV=1	[more]
A0A6J1C1A4	4.2e-52	72.84	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1HET3	1.3e-48	66.67	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	2.4e-47	66.05	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of IVF0004501 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142753.1	2.30e-80	81.71	CASP-like protein 4D1 [Cucumis sativus] >KGN51297.1 hypothetical protein Csa_009...	[more]
XP_038877614.1	1.26e-72	76.07	CASP-like protein 4D1 [Benincasa hispida]	[more]
KGN51298.1	1.79e-72	80.25	hypothetical protein Csa_008715 [Cucumis sativus]	[more]
XP_031741190.1	5.15e-72	80.25	CASP-like protein 4D1 [Cucumis sativus]	[more]
XP_022134193.1	1.12e-66	72.84	CASP-like protein 4D1 [Momordica charantia]	[more]

BLAST of IVF0004501 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	5.1e-18	36.36	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	1.9e-17	36.59	Uncharacterised protein family (UPF0497)	[more]
AT1G79780.1	9.4e-04	26.92	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..157 e-value: 6.1E-12 score: 43.6
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..147 e-value: 4.2E-24 score: 85.0
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 5..162
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 5..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004501.1	IVF0004501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding