IVF0004484 (gene) Melon (IVF77) v1

Overview


Name	IVF0004484
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	splicing factor 3B subunit 1
Location	chr07: 16202936 .. 16206723 (-)
RNA-Seq Expression	IVF0004484
Synteny	IVF0004484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTAGAGATTGCCAAGACCCAGGAGGAAAGGAGGAAGATGGAACAGCAGTTGGCTTCTCTCAATTCAGTGACCTTCGATACTGATCTTTATGGTGGTAATGATAAAGCGGGTTATGTCACCTCCATCCCCGTTAATGAGGATGATGAGAATCTTGAATCCCAAGTTAACGTGGTTGGTCGGAAGTTGGCATCCTATACGGCCCCGAAGTCTCTGTTAAAGGAGATGCCCAGAGGTGTGGATGAAGATGATGATTTGGGTTATAAGAAGCCGCAGAGGATTATTGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTGATTTCACCTGAGCGCCATGATGCGTTTGCTGCGGGTGAGAAGACGCCGGATCCCTCTGTGAGGACTTATGCAGAGGTGATGAGAGAGGAGGCGTTGAAGAGGGAGAGAGAGGAGACGTTAAGGGCTATAGCTAAGAAGAAGGAGGAAGAGGAAGCCGCTAAGGCATCGGGAGAGAAACCGAAGGAGTCAGTTGCATCTGCTGCAGCTCCTCAGAAGAGGAGGAATAGGTGGGATCAATCGCAGGATGATGGTGGAGCAAAAAAAGCAAAGACCTCAGACTGGGATTTGCCAGATACAACACCCGGAAGGTGGGATGCTACACCAGGCCGAGTTGGGGATGCCACTCCCGGTGTGGGGAGAAGAAATAGGTGGGATGAGACCCCAACTCCTGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGCGGTGTTACGCCTGGTGCAACACCCGCTGGAATGACTTGGGATGCAACTCCTAAACTTGCAGGGATGGCTACACCTACTCCAAAGAGGCAGCGATCGCGATGGGATGAGACCCCAGCAACAATGGGAAGTGCCACTCCTATGCCTGGAGCAACCCCTGCTGCTGCATTTACTCCCGGTGTAACTCCTGTTGGAGGGGTTGAGCTGGCTACTCCAACACCTGGGGCTATCAATTTGCGTGGCCCGATGACCCCTGAGCAGTATAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAACCGCCCGTTGACTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTTCCAATTCGAACACCTGCAAGGAAGTTACTCGCCACACCTACTCCAATGGGAACTCCTCTTTATGCCATCCCAGAGGAGAATCGTGGCCAGCAGTTTGATGTTCCAAAGGAAGCACCTGGTGGCTTGCCATTCATGAAGCCTGAGGATTACCAATACTTTGGGGCATTGTTGAATGAGGAAGATGAAGAGGAATTGTCTCCAGAAGAACAGAAAGAGCGGAAGATTATGAAGCTCTTGCTCAAGGTTAAGAATGGAACACCTCCTCAGAGGAAAACGGCTTTAAGGCAGCTTACTGATAAAGCTCGTGAGTTTGGTGCAGGCCCATTGTTTAACCGCATTCTGCCACTCCTTATGCAGCCTACGCTGGAAGACCAGGAGAGGCATCTTCTGGTTAAGGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGCCCCTATGTGCACAAAATTCTTGTTGTGATTGAGCCATTGTTGATTGACGAAGATTACTATGCACGTGTAGAAGGTAGAGAAATTATATCCAATCTTAGTAAGGCAGCTGGTTTGGCTACTATGATTGCTGCAATGCGTCCAGATATTGACAACATTGATGAGTACGTTAGGAATACCACTGCAAGGGCTTTCAGTGTCGTTGCTTCTGCCCTAGGAATTCCTGCTCTTCTTCCATTTTTAAAAGCTGTGTGTCAGAGTAAAAAATCATGGCAAGCACGGCATACTGGAATTAAGATTGTTCAGCAGATTGCTATTCTCATTGGTTGTGCAGTGCTACCACATCTTAGGTCTCTTGTAGAAATTATAGAACACGGTCTTAATGATGAGAACCAGAAGGTGAGGACAATTACTGCATTGTCTTTAGCTGCTCTTGCTGAGGCTGCAGCCCCATATGGTATTGAAAGCTTTGATTCAGTCTTGAAGCCACTGTGGAAGGGTATTAGATCACACCGTGGTAAGGTTTTGGCTGCTTTCCTGAAGGCGATTGGTTTTATTATTCCTTTGATGGATGCGTTGTATGCCTGCTACTATACAAAGGAAGTGATGTACATTCTGATTCGAGAGTTCCAGTCACCCGATGAAGAAATGAAAAGATTGTTCTCAAAGTGGTTAAGCAGTGTGTGAGTACTGAGGGAGTAGAGGCTGATTATATCCGCAATGATATTCTGCCTGAATTCTTTAGGAATTTCTGGGTTCGCAGAATGGCATTAGATCGAAGAAATTACAAGCAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGCGTTGCTGATATCGTAGGTAGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACAATTGAGAAAGTTGTTGCAAACCTGGGTGCATCTGATATCGATGCTAGGTTAGAAGAGCTATTGATTGATGGTATTCTTTATGCCTTCCAAGAGCAGACCAGCGATGATGCTAACGTGATGCTTAATGGGTTTGGCGCAGTTGTCAACTCTCTTGGGCAGAGAGTAAAACCGTATCTTCCTCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGTGCGAAGGTGAGACAGCAAGCAGCAGATCTTATTTCAAGGATTGCAGTTGTTATGAAACAGTGCCAAGAGGAACAGCTCATGGGCCATCTTGGCGTTGTCTTGTATGAATATTTGGGAGAAGAATACCCGGAAGTCCTGGGTTCAATTTTGGGAGCTCTCAAGGCTATAGTTAATGTTATTGGTATGACAAAGATGACACCTCCTATCAAGGATTTGCTTCCTAGATTAACACCAATTTTGAAGAACAGACATGAGAAAGTGCAAGAGAACTGCATTGACCTTGTTGGTCGTATTGCTGATCGTGGTGCTGAATTTGTTCCAGCAAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTTAAAGCTCACAAGAAGGGTATCCGTCGAGCTACTGTGAACACTTTTGGTTATATTGCGAAAGCCATTGGGCCGCAAGATGTTTTGGCAACATTGTTGAACAATCTAAAAGTGCAGGAGCGTCAGAATCGTGTTTGCACTACTGTTGCCATTGCTATAGTTGCAGAAACCTGTTCTCCATTCACTGTTCTACCTGCATTGATGAACGAGTATCGTGTGCCAGAGCTTAATGTGCAAAACGGCGTGTTGAAGTCTCTCTCTTTCCTTTTTGAGTACATTGGTGAAATGGGAAAGGATTATATATATGCTGTGACGCCATTGCTTGAGGATGCTCTTATGGACCGAGATTTGGTCCACAGACAAACTGCAGCCTCTGCTGTGAAACATATGGCTCTAGGGGTAGCCGGTTTAGGTTGTGAGGATGCCTTAGTCCACTTGCTGAACTACGTATGGCCAAACATTTTTGAAACATCACCACATGTCATAAACGCTGTGATGGAAGCCATCGAAGGAATGAGGGTGGCATTGGGTGCAGCCGTTGTGCTCAACTACTGCCTGCAGGGGCTTTTCCACCCAGCTCGGAAAGTTCGAGAAGTATACTGGAAAATCTACAACTCACTGTACATTGGTGCTCAGGATGCTCTTGTTGCATCTTATCCAGCATTAGAGGATGGAGAAAACAATGTGTACAGCCGACCAGAACTGGCAATGTTTATCTGA

mRNA sequence

ATGGATTTAGAGATTGCCAAGACCCAGGAGGAAAGGAGGAAGATGGAACAGCAGTTGGCTTCTCTCAATTCAGTGACCTTCGATACTGATCTTTATGGTGGTAATGATAAAGCGGGTTATGTCACCTCCATCCCCGTTAATGAGGATGATGAGAATCTTGAATCCCAAGTTAACGTGGTTGGTCGGAAGTTGGCATCCTATACGGCCCCGAAGTCTCTGTTAAAGGAGATGCCCAGAGGTGTGGATGAAGATGATGATTTGGGTTATAAGAAGCCGCAGAGGATTATTGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTGATTTCACCTGAGCGCCATGATGCGTTTGCTGCGGGTGAGAAGACGCCGGATCCCTCTGTGAGGACTTATGCAGAGGTGATGAGAGAGGAGGCGTTGAAGAGGGAGAGAGAGGAGACGTTAAGGGCTATAGCTAAGAAGAAGGAGGAAGAGGAAGCCGCTAAGGCATCGGGAGAGAAACCGAAGGAGTCAGTTGCATCTGCTGCAGCTCCTCAGAAGAGGAGGAATAGGTGGGATCAATCGCAGGATGATGGTGGAGCAAAAAAAGCAAAGACCTCAGACTGGGATTTGCCAGATACAACACCCGGAAGGTGGGATGCTACACCAGGCCGAGTTGGGGATGCCACTCCCGGTGTGGGGAGAAGAAATAGGTGGGATGAGACCCCAACTCCTGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGCGGTGTTACGCCTGGTGCAACACCCGCTGGAATGACTTGGGATGCAACTCCTAAACTTGCAGGGATGGCTACACCTACTCCAAAGAGGCAGCGATCGCGATGGGATGAGACCCCAGCAACAATGGGAAGTGCCACTCCTATGCCTGGAGCAACCCCTGCTGCTGCATTTACTCCCGGTGTAACTCCTGTTGGAGGGGTTGAGCTGGCTACTCCAACACCTGGGGCTATCAATTTGCGTGGCCCGATGACCCCTGAGCAGTATAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAACCGCCCGTTGACTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTTCCAATTCGAACACCTGCAAGGAAGTTACTCGCCACACCTACTCCAATGGGAACTCCTCTTTATGCCATCCCAGAGGAGAATCGTGGCCAGCAGTTTGATGTTCCAAAGGAAGCACCTGGTGGCTTGCCATTCATGAAGCCTGAGGATTACCAATACTTTGGGGCATTGTTGAATGAGGAAGATGAAGAGGAATTGTCTCCAGAAGAACAGAAAGAGCGGAAGATTATGAAGCTCTTGCTCAAGGTTAAGAATGGAACACCTCCTCAGAGGAAAACGGCTTTAAGGCAGCTTACTGATAAAGCTCGTGAGTTTGGTGCAGGCCCATTGTTTAACCGCATTCTGCCACTCCTTATGCAGCCTACGCTGGAAGACCAGGAGAGGCATCTTCTGGTTAAGGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGCCCCTATGTGCACAAAATTCTTGTTGTGATTGAGCCATTGTTGATTGACGAAGATTACTATGCACGTGTAGAAGGTAGAGAAATTATATCCAATCTTAGTAAGGCAGCTGGTTTGGCTACTATGATTGCTGCAATGCGTCCAGATATTGACAACATTGATGAGTACGTTAGGAATACCACTGCAAGGGCTTTCAGTGTCGTTGCTTCTGCCCTAGGAATTCCTGCTCTTCTTCCATTTTTAAAAGCTGTGTGTCAGAGTAAAAAATCATGGCAAGCACGGCATACTGGAATTAAGATTGTTCAGCAGATTGCTATTCTCATTGGTTGTGCAGTGCTACCACATCTTAGGTCTCTTGTAGAAATTATAGAACACGGTCTTAATGATGAGAACCAGAAGGTGAGGACAATTACTGCATTGTCTTTAGCTGCTCTTGCTGAGGCTGCAGCCCCATATGGTATTGAAAGCTTTGATTCAGTCTTGAAGCCACTGTGGAAGGGTATTAGATCACACCGTGGTAAGGTTTTGGCTGCTTTCCTGAAGGCGATTGGTTTTATTATTCCTTTGATGGATGCGTTGTATGCCTGCTACTATACAAAGGAAGTGATGTACATTCTGATTCGAGAGTTCCAGTCACCCGATGAAGAAATGAAAAGATTTACTGAGGGAGTAGAGGCTGATTATATCCGCAATGATATTCTGCCTGAATTCTTTAGGAATTTCTGGGTTCGCAGAATGGCATTAGATCGAAGAAATTACAAGCAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGCGTTGCTGATATCGTAGGTAGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACAATTGAGAAAGTTGTTGCAAACCTGGGTGCATCTGATATCGATGCTAGGTTAGAAGAGCTATTGATTGATGGTATTCTTTATGCCTTCCAAGAGCAGACCAGCGATGATGCTAACGTGATGCTTAATGGGTTTGGCGCAGTTGTCAACTCTCTTGGGCAGAGAGTAAAACCGTATCTTCCTCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGTGCGAAGGTGAGACAGCAAGCAGCAGATCTTATTTCAAGGATTGCAGTTGTTATGAAACAGTGCCAAGAGGAACAGCTCATGGGCCATCTTGGCGTTGTCTTGTATGAATATTTGGGAGAAGAATACCCGGAAGTCCTGGGTTCAATTTTGGGAGCTCTCAAGGCTATAGTTAATGTTATTGGTATGACAAAGATGACACCTCCTATCAAGGATTTGCTTCCTAGATTAACACCAATTTTGAAGAACAGACATGAGAAAGTGCAAGAGAACTGCATTGACCTTGTTGGTCGTATTGCTGATCGTGGTGCTGAATTTGTTCCAGCAAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTTAAAGCTCACAAGAAGGGTATCCGTCGAGCTACTGTGAACACTTTTGGTTATATTGCGAAAGCCATTGGGCCGCAAGATGTTTTGGCAACATTGTTGAACAATCTAAAAGTGCAGGAGCGTCAGAATCGTGTTTGCACTACTGTTGCCATTGCTATAGTTGCAGAAACCTGTTCTCCATTCACTGTTCTACCTGCATTGATGAACGAGTATCGTGTGCCAGAGCTTAATGTGCAAAACGGCGTGTTGAAGTCTCTCTCTTTCCTTTTTGAGTACATTGGTGAAATGGGAAAGGATTATATATATGCTGTGACGCCATTGCTTGAGGATGCTCTTATGGACCGAGATTTGGTCCACAGACAAACTGCAGCCTCTGCTGTGAAACATATGGCTCTAGGGGTAGCCGGTTTAGGTTGTGAGGATGCCTTAGTCCACTTGCTGAACTACGTATGGCCAAACATTTTTGAAACATCACCACATGTCATAAACGCTGTGATGGAAGCCATCGAAGGAATGAGGGTGGCATTGGGTGCAGCCGTTGTGCTCAACTACTGCCTGCAGGGGCTTTTCCACCCAGCTCGGAAAGTTCGAGAAGTATACTGGAAAATCTACAACTCACTGTACATTGGTGCTCAGGATGCTCTTGTTGCATCTTATCCAGCATTAGAGGATGGAGAAAACAATGTGTACAGCCGACCAGAACTGGCAATGTTTATCTGA

Coding sequence (CDS)

ATGGATTTAGAGATTGCCAAGACCCAGGAGGAAAGGAGGAAGATGGAACAGCAGTTGGCTTCTCTCAATTCAGTGACCTTCGATACTGATCTTTATGGTGGTAATGATAAAGCGGGTTATGTCACCTCCATCCCCGTTAATGAGGATGATGAGAATCTTGAATCCCAAGTTAACGTGGTTGGTCGGAAGTTGGCATCCTATACGGCCCCGAAGTCTCTGTTAAAGGAGATGCCCAGAGGTGTGGATGAAGATGATGATTTGGGTTATAAGAAGCCGCAGAGGATTATTGATAGAGAGGATGATTATAGGAAACGTAGGTTGAATAGGGTGATTTCACCTGAGCGCCATGATGCGTTTGCTGCGGGTGAGAAGACGCCGGATCCCTCTGTGAGGACTTATGCAGAGGTGATGAGAGAGGAGGCGTTGAAGAGGGAGAGAGAGGAGACGTTAAGGGCTATAGCTAAGAAGAAGGAGGAAGAGGAAGCCGCTAAGGCATCGGGAGAGAAACCGAAGGAGTCAGTTGCATCTGCTGCAGCTCCTCAGAAGAGGAGGAATAGGTGGGATCAATCGCAGGATGATGGTGGAGCAAAAAAAGCAAAGACCTCAGACTGGGATTTGCCAGATACAACACCCGGAAGGTGGGATGCTACACCAGGCCGAGTTGGGGATGCCACTCCCGGTGTGGGGAGAAGAAATAGGTGGGATGAGACCCCAACTCCTGGGAGGTTGGCTGATTTGGATGCAACTCCAGCAGGCGGTGTTACGCCTGGTGCAACACCCGCTGGAATGACTTGGGATGCAACTCCTAAACTTGCAGGGATGGCTACACCTACTCCAAAGAGGCAGCGATCGCGATGGGATGAGACCCCAGCAACAATGGGAAGTGCCACTCCTATGCCTGGAGCAACCCCTGCTGCTGCATTTACTCCCGGTGTAACTCCTGTTGGAGGGGTTGAGCTGGCTACTCCAACACCTGGGGCTATCAATTTGCGTGGCCCGATGACCCCTGAGCAGTATAATTTGATGAGGTGGGAGAGAGATATTGAGGAGAGGAACCGCCCGTTGACTGATGAAGAACTTGATGCCATGTTTCCACAAGAGGGATATAAGATTCTGGACCCTCCTGCTTCCTATGTTCCAATTCGAACACCTGCAAGGAAGTTACTCGCCACACCTACTCCAATGGGAACTCCTCTTTATGCCATCCCAGAGGAGAATCGTGGCCAGCAGTTTGATGTTCCAAAGGAAGCACCTGGTGGCTTGCCATTCATGAAGCCTGAGGATTACCAATACTTTGGGGCATTGTTGAATGAGGAAGATGAAGAGGAATTGTCTCCAGAAGAACAGAAAGAGCGGAAGATTATGAAGCTCTTGCTCAAGGTTAAGAATGGAACACCTCCTCAGAGGAAAACGGCTTTAAGGCAGCTTACTGATAAAGCTCGTGAGTTTGGTGCAGGCCCATTGTTTAACCGCATTCTGCCACTCCTTATGCAGCCTACGCTGGAAGACCAGGAGAGGCATCTTCTGGTTAAGGTTATTGACAGAGTGCTTTATAAATTGGATGAATTGGTTCGCCCCTATGTGCACAAAATTCTTGTTGTGATTGAGCCATTGTTGATTGACGAAGATTACTATGCACGTGTAGAAGGTAGAGAAATTATATCCAATCTTAGTAAGGCAGCTGGTTTGGCTACTATGATTGCTGCAATGCGTCCAGATATTGACAACATTGATGAGTACGTTAGGAATACCACTGCAAGGGCTTTCAGTGTCGTTGCTTCTGCCCTAGGAATTCCTGCTCTTCTTCCATTTTTAAAAGCTGTGTGTCAGAGTAAAAAATCATGGCAAGCACGGCATACTGGAATTAAGATTGTTCAGCAGATTGCTATTCTCATTGGTTGTGCAGTGCTACCACATCTTAGGTCTCTTGTAGAAATTATAGAACACGGTCTTAATGATGAGAACCAGAAGGTGAGGACAATTACTGCATTGTCTTTAGCTGCTCTTGCTGAGGCTGCAGCCCCATATGGTATTGAAAGCTTTGATTCAGTCTTGAAGCCACTGTGGAAGGGTATTAGATCACACCGTGGTAAGGTTTTGGCTGCTTTCCTGAAGGCGATTGGTTTTATTATTCCTTTGATGGATGCGTTGTATGCCTGCTACTATACAAAGGAAGTGATGTACATTCTGATTCGAGAGTTCCAGTCACCCGATGAAGAAATGAAAAGATTTACTGAGGGAGTAGAGGCTGATTATATCCGCAATGATATTCTGCCTGAATTCTTTAGGAATTTCTGGGTTCGCAGAATGGCATTAGATCGAAGAAATTACAAGCAACTTGTGGACACAACTGTTGAGATAGCAAATAAAGTAGGCGTTGCTGATATCGTAGGTAGAGTTGTTGAAGATCTCAAGGATGAAAGTGAACCTTATAGAAGAATGGTTATGGAAACAATTGAGAAAGTTGTTGCAAACCTGGGTGCATCTGATATCGATGCTAGGTTAGAAGAGCTATTGATTGATGGTATTCTTTATGCCTTCCAAGAGCAGACCAGCGATGATGCTAACGTGATGCTTAATGGGTTTGGCGCAGTTGTCAACTCTCTTGGGCAGAGAGTAAAACCGTATCTTCCTCAGATTTGTGGTACCATAAAGTGGCGATTGAATAACAAGAGTGCGAAGGTGAGACAGCAAGCAGCAGATCTTATTTCAAGGATTGCAGTTGTTATGAAACAGTGCCAAGAGGAACAGCTCATGGGCCATCTTGGCGTTGTCTTGTATGAATATTTGGGAGAAGAATACCCGGAAGTCCTGGGTTCAATTTTGGGAGCTCTCAAGGCTATAGTTAATGTTATTGGTATGACAAAGATGACACCTCCTATCAAGGATTTGCTTCCTAGATTAACACCAATTTTGAAGAACAGACATGAGAAAGTGCAAGAGAACTGCATTGACCTTGTTGGTCGTATTGCTGATCGTGGTGCTGAATTTGTTCCAGCAAGAGAATGGATGAGGATCTGCTTTGAGTTGCTTGAGATGCTTAAAGCTCACAAGAAGGGTATCCGTCGAGCTACTGTGAACACTTTTGGTTATATTGCGAAAGCCATTGGGCCGCAAGATGTTTTGGCAACATTGTTGAACAATCTAAAAGTGCAGGAGCGTCAGAATCGTGTTTGCACTACTGTTGCCATTGCTATAGTTGCAGAAACCTGTTCTCCATTCACTGTTCTACCTGCATTGATGAACGAGTATCGTGTGCCAGAGCTTAATGTGCAAAACGGCGTGTTGAAGTCTCTCTCTTTCCTTTTTGAGTACATTGGTGAAATGGGAAAGGATTATATATATGCTGTGACGCCATTGCTTGAGGATGCTCTTATGGACCGAGATTTGGTCCACAGACAAACTGCAGCCTCTGCTGTGAAACATATGGCTCTAGGGGTAGCCGGTTTAGGTTGTGAGGATGCCTTAGTCCACTTGCTGAACTACGTATGGCCAAACATTTTTGAAACATCACCACATGTCATAAACGCTGTGATGGAAGCCATCGAAGGAATGAGGGTGGCATTGGGTGCAGCCGTTGTGCTCAACTACTGCCTGCAGGGGCTTTTCCACCCAGCTCGGAAAGTTCGAGAAGTATACTGGAAAATCTACAACTCACTGTACATTGGTGCTCAGGATGCTCTTGTTGCATCTTATCCAGCATTAGAGGATGGAGAAAACAATGTGTACAGCCGACCAGAACTGGCAATGTTTATCTGA

Protein sequence

MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVVGRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAPQKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMKRFTEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAMFI

Homology

[Close]

BLAST of IVF0004484 vs. ExPASy Swiss-Prot
Match: O75533 (Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3)

HSP 1 Score: 1672.9 bits (4331), Expect = 0.0e+00
Identity = 912/1320 (69.09%), Postives = 1042/1320 (78.94%), Query Frame = 0


Query: 4    EIAKTQE----ERRKMEQQLASLNSVT---------FDTDLYGGNDK--AGYVTSIPVNE 63
            +IAKT E    + R+++ + A+L+            +D ++YGG+D   AGYVTSI   E
Sbjct: 3    KIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATE 62

Query: 64   ---DDENLESQVNVVGRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKR 123
               DD++  S  +++G+K   Y AP +LL ++P+  ++ D     +P +I DRED+Y+K 
Sbjct: 63   LEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKH 122

Query: 124  RLNRVISPERHDAFAAGEKTPDP--SVRTYAEVMREEALKREREETLRAIAKKKEEEEAA 183
            R   +ISPER D FA G KTPDP  + RTY +VMRE+ L +E  E  + +A+K      A
Sbjct: 123  RRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEK------A 182

Query: 184  KASGEKPKESVASAAAPQKRRNRWDQSQDD-GGAKKAKTSDWDLPDT---TPG-RWDATP 243
            KA   K     A++  P KR+ RWDQ+ D   GA   K S WD  +T   TP  RWD TP
Sbjct: 183  KAGELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETP 242

Query: 244  GRV-GDATPGVGRRNR-WDETPTPGRLADLDATPAGGVTPG-ATP--AGMT-------WD 303
            GR  G  TPG    ++ WD  PTP       ATP  G TPG ATP   G T       WD
Sbjct: 243  GRAKGSETPGATPGSKIWD--PTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWD 302

Query: 304  ATPKL--------AGMA--------------TPTP--KRQRSRWDETPAT-MGSATPMPG 363
             TPK         +G A              TPTP   +++SRWDETPA+ MG +TP+  
Sbjct: 303  ETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV-- 362

Query: 364  ATPAAAFTPGVTPVG--GVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEE 423
                   TPG TP+G   + +ATPTPG I     MTPEQ    RWER+I+ERNRPL+DEE
Sbjct: 363  ------LTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEE 422

Query: 424  LDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL-YAIPEENRGQQFDVPKEAP 483
            LDAMFP EGYK+L PPA YVPIRTPARKL ATPTP+G    + +  E+R  +  V  +  
Sbjct: 423  LDAMFP-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMK-SVNDQPS 482

Query: 484  GGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 543
            G LPF+KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TD
Sbjct: 483  GNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITD 542

Query: 544  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL 603
            KAREFGAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPL
Sbjct: 543  KAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPL 602

Query: 604  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 663
            LIDEDYYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGI
Sbjct: 603  LIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGI 662

Query: 664  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 723
            P+LLPFLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKV
Sbjct: 663  PSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKV 722

Query: 724  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALY 783
            RTI+AL++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA Y
Sbjct: 723  RTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEY 782

Query: 784  ACYYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVR 843
            A YYT+EVM ILIREFQSPDEEMK+           T+GVEA+YI+ +ILP FF++FW  
Sbjct: 783  ANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQH 842

Query: 844  RMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGA 903
            RMALDRRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA
Sbjct: 843  RMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGA 902

Query: 904  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL 963
            +DID +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRL
Sbjct: 903  ADIDHKLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRL 962

Query: 964  NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 1023
            NNKSAKVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAI
Sbjct: 963  NNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 1022

Query: 1024 VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1083
            VNVIGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICF
Sbjct: 1023 VNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICF 1082

Query: 1084 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA 1143
            ELLE+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVA
Sbjct: 1083 ELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVA 1142

Query: 1144 ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1203
            ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
Sbjct: 1143 ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1202

Query: 1204 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1249
            DLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA
Sbjct: 1203 DLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVA 1262

[Close]

BLAST of IVF0004484 vs. ExPASy Swiss-Prot
Match: Q99NB9 (Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1)

HSP 1 Score: 1671.8 bits (4328), Expect = 0.0e+00
Identity = 911/1320 (69.02%), Postives = 1042/1320 (78.94%), Query Frame = 0


Query: 4    EIAKTQE----ERRKMEQQLASLNSVT---------FDTDLYGGNDK--AGYVTSIPVNE 63
            +IAKT E    + R+++ + A+L+            +D ++YGG+D   AGYVTSI   E
Sbjct: 3    KIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAATE 62

Query: 64   ---DDENLESQVNVVGRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKR 123
               DD++  S  +++G+K   Y AP +LL ++P+  ++ D     +P +I DRED+Y+K 
Sbjct: 63   LEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYKKH 122

Query: 124  RLNRVISPERHDAFAAGEKTPDP--SVRTYAEVMREEALKREREETLRAIAKKKEEEEAA 183
            R   +ISPER D FA G KTPDP  + RTY +VMRE+ L +E  E  + +A+K      A
Sbjct: 123  RRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEK------A 182

Query: 184  KASGEKPKESVASAAAPQKRRNRWDQSQDD-GGAKKAKTSDWDLPDT---TPG-RWDATP 243
            KA   K     A++  P KR+ RWDQ+ D   GA   K S WD  +T   TP  RWD TP
Sbjct: 183  KAGELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETP 242

Query: 244  GRV-GDATPGVGRRNR-WDETPTPGRLADLDATPAGGVTPG-ATP--AGMT-------WD 303
            GR  G  TPG    ++ WD  PTP       ATP  G TPG ATP   G T       WD
Sbjct: 243  GRAKGSETPGATPGSKIWD--PTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWD 302

Query: 304  ATPKL--------AGMA--------------TPTP--KRQRSRWDETPAT-MGSATPMPG 363
             TPK         +G A              TPTP   +++SRWDETPA+ MG +TP+  
Sbjct: 303  ETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV-- 362

Query: 364  ATPAAAFTPGVTPVG--GVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEE 423
                   TPG TP+G   + +ATPTPG I     MTPEQ    RWER+I+ERNRPL+DEE
Sbjct: 363  ------LTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEE 422

Query: 424  LDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL-YAIPEENRGQQFDVPKEAP 483
            LDAMFP EGYK+L PPA YVPIRTPARKL ATPTP+G    + +  E+R  +  V  +  
Sbjct: 423  LDAMFP-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMK-SVNDQPS 482

Query: 484  GGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTD 543
            G LPF+KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TD
Sbjct: 483  GNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITD 542

Query: 544  KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL 603
            KAREFGAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPL
Sbjct: 543  KAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPL 602

Query: 604  LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI 663
            LIDEDYYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGI
Sbjct: 603  LIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGI 662

Query: 664  PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV 723
            P+LLPFLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKV
Sbjct: 663  PSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKV 722

Query: 724  RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALY 783
            RTI+AL++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA Y
Sbjct: 723  RTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEY 782

Query: 784  ACYYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVR 843
            A YYT+EVM ILIREFQSPDEEMK+           T+GVEA+YI+ +ILP FF++FW  
Sbjct: 783  ANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQH 842

Query: 844  RMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGA 903
            RMALDRRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA
Sbjct: 843  RMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGA 902

Query: 904  SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL 963
            +DID +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRL
Sbjct: 903  ADIDHKLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRL 962

Query: 964  NNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 1023
            NNKSAKVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAI
Sbjct: 963  NNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAI 1022

Query: 1024 VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF 1083
            VNVIGM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICF
Sbjct: 1023 VNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICF 1082

Query: 1084 ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA 1143
            ELLE+LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVA
Sbjct: 1083 ELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVA 1142

Query: 1144 ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1203
            ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
Sbjct: 1143 ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR 1202

Query: 1204 DLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVA 1249
            DLVHRQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA
Sbjct: 1203 DLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVA 1262

[Close]

BLAST of IVF0004484 vs. ExPASy Swiss-Prot
Match: O57683 (Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1)

HSP 1 Score: 1664.8 bits (4310), Expect = 0.0e+00
Identity = 907/1316 (68.92%), Postives = 1045/1316 (79.41%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKM-EQQLASLNSV-TFDTDLYGGNDK--AGYVTSIPVNE---DDENL 60
            ++ +I + Q ++  + E++   L+S   FD ++YGG+D    GYVTSI  NE   DD+++
Sbjct: 11   IEAQIREIQGKKAALDEEEGVGLDSTGYFDQEIYGGSDSRFTGYVTSIAANEQEDDDDDV 70

Query: 61   ESQVNVVGRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISP 120
             S      +K   Y AP +LL ++P+  ++ D     +PQ+I +RED+Y+++R   +ISP
Sbjct: 71   SSA--TFEQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIANREDEYKQQRRKMIISP 130

Query: 121  ERHDAFAAGEKTPDP--SVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPK 180
            ER D FA G KTPDP  + RT+ +VM+E+ L +E  E  + IA+K +  +    +G    
Sbjct: 131  ERLDPFADGGKTPDPKLNARTFKDVMQEQYLTKEEREIRQQIAEKAKSGDLKVVNG---- 190

Query: 181  ESVASAAA--PQKRRNRWDQSQDD-GGAKKAKTSDWDLPDTTPG------RWDATPGRV- 240
             S AS+AA  P KR+ RWDQ+ D   G+   K S WD  + TPG      RWD TPGR  
Sbjct: 191  -SSASSAAQPPSKRKRRWDQTGDQTPGSTPKKLSSWDQAEVTPGHTPSSLRWDETPGRAK 250

Query: 241  GDATPGVGRRNR-WDETPTPGRLADLDATPAGGVTPG-ATP--AGMT-------WDATPK 300
            G+ TPG    ++ WD  PTP       ATP  G TPG  TP  +G T       WD TPK
Sbjct: 251  GNETPGATPGSKIWD--PTPSHTPAGVATPGRGDTPGHVTPGHSGATSSARKNRWDETPK 310

Query: 301  L--------AGMA--------------TPTP--KRQRSRWDETPAT-MGSATPMPGATPA 360
                     +G A              TPTP   +++SRWDETPA+ MG +TP+      
Sbjct: 311  TERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPV------ 370

Query: 361  AAFTPGVTPVG--GVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEELDAM 420
               TPG TP+G   + +ATPTPG I     MTPEQ    RWER+I+ERNRPL+DEELDAM
Sbjct: 371  --LTPGKTPIGTPAMNMATPTPGHIM---SMTPEQLQAWRWEREIDERNRPLSDEELDAM 430

Query: 421  FPQEGYKILDPPASYVPIRTPARKLLATPTPM-GTPLYAIPEENRGQQFDVPKEAPGGLP 480
            FP EGYK+L PPA YVPIRTPARKL ATPTP+ G   + +P E+R  +  V  +  G LP
Sbjct: 431  FP-EGYKVLPPPAGYVPIRTPARKLTATPTPLGGLTGFHMPTEDRSMK-SVSDQPSGNLP 490

Query: 481  FMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARE 540
            F+KP+D QYF  LL + DE  LSPEEQKERKIMKLLLK+KNGTPP RK ALRQ+TDKARE
Sbjct: 491  FLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE 550

Query: 541  FGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDE 600
            FGAGPLFN+ILPLLM PTLEDQERHLLVKVIDR+LYKLD+LVRPYVHKILVVIEPLLIDE
Sbjct: 551  FGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDE 610

Query: 601  DYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALL 660
            DYYARVEGREIISNL+KAAGLATMI+ MRPDIDN+DEYVRNTTARAF+VVASALGIP+LL
Sbjct: 611  DYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLL 670

Query: 661  PFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTIT 720
            PFLKAVC+SKKSWQARHTGIKIVQQIAIL+GCA+LPHLRSLVEIIEHGL DE QKVRTI+
Sbjct: 671  PFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTIS 730

Query: 721  ALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYACYY 780
            AL++AALAEAA PYGIESFDSVLKPLWKGIR HRGK LAAFLKAIG++IPLMDA YA YY
Sbjct: 731  ALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYY 790

Query: 781  TKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRMAL 840
            T+EVM ILIREFQSPDEEMK+           T+GVEA+YI+ +ILP FF++FW  RMAL
Sbjct: 791  TREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMAL 850

Query: 841  DRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDID 900
            DRRNY+QLVDTTVE+ANKVG A+I+ R+V+DLKDE+E YR+MVMETIEK++ NLGA+DID
Sbjct: 851  DRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADID 910

Query: 901  ARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKS 960
             +LEE LIDGILYAFQEQT++D +VMLNGFG VVN+LG+RVKPYLPQICGT+ WRLNNKS
Sbjct: 911  HKLEEQLIDGILYAFQEQTTED-SVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKS 970

Query: 961  AKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI 1020
            AKVRQQAADLISR AVVMK CQEE+LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI
Sbjct: 971  AKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI 1030

Query: 1021 GMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLE 1080
            GM KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE+V AREWMRICFELLE
Sbjct: 1031 GMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLE 1090

Query: 1081 MLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCS 1140
            +LKAHKK IRRATVNTFGYIAKAIGP DVLATLLNNLKVQERQNRVCTTVAIAIVAETCS
Sbjct: 1091 LLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCS 1150

Query: 1141 PFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVH 1200
            PFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVH
Sbjct: 1151 PFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVH 1210

Query: 1201 RQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALGAA 1249
            RQTA++ V+HM+LGV G GCED+L HLLNYVWPN+FETSPHVI AVM A+EG+RVA+G  
Sbjct: 1211 RQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPC 1270

[Close]

BLAST of IVF0004484 vs. ExPASy Swiss-Prot
Match: Q10178 (U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp10 PE=1 SV=3)

HSP 1 Score: 1249.2 bits (3231), Expect = 0.0e+00
Identity = 705/1293 (54.52%), Postives = 879/1293 (67.98%), Query Frame = 0


Query: 4    EIAKTQEERRKMEQQLASL--------NSVTFDTDLY-GGNDKAGYVTSIPV------NE 63
            E+ + Q+E  K      S+        N + ++  L+   N K  Y ++I V      +E
Sbjct: 34   ELLRRQKEAAKNSSTNGSVNIEGTQDSNDLQYNAHLFKSSNPKEEYDSAIDVRNDISQDE 93

Query: 64   DDENLESQVNVVGRKLASYTAPKSLLKEMPRGVDEDDDLGYKK--PQRIIDREDDYRKRR 123
            DD    + VN   R +  Y APK LL E     DE  D   ++   ++I DRE DY+K+R
Sbjct: 94   DDYKRTNDVNDSYRLVRQYEAPKELLNEY---ADESYDPMQERQSKKQIQDRESDYQKQR 153

Query: 124  LNRVISPERHDAFAAGEKTPD---PSVRTYAEVMREEALKREREETLRAIAKKKEEEEAA 183
             +R ++P R DAF      PD    + R+YAEVMR+  L++E       + +++ E    
Sbjct: 154  YDRQLTPTRVDAF-----QPDGTQSNGRSYAEVMRQVELEKEERRVHMELNQRRREGTLK 213

Query: 184  KASGEKPKESVASAAAPQKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGD 243
            +   E   ES++                        K  + +L +T   +          
Sbjct: 214  EVEEE---ESISD-----------------------KKRELELNNTEISQ---------- 273

Query: 244  ATPGVGRRNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQR 303
                  +R+RWD+ P                 P  T    T                ++R
Sbjct: 274  ----KPKRSRWDQAP-----------------PSVTQVSTT----------------KRR 333

Query: 304  SRWDETPATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMR 363
            SRWD+ P                 FT     +              +   +  ++ N+  
Sbjct: 334  SRWDKAPEN---------------FTISEHVIEN-----------GISEDLINKEVNV-- 393

Query: 364  WERDIEERNRP----LTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPL 423
                +EE+ RP    LT+EEL+ + P EGY IL+PP  Y+    P  +LL   T + T  
Sbjct: 394  ----VEEKLRPPVRLLTEEELNELLPSEGYAILEPPPGYLESIHP--ELLQKGTTLDT-- 453

Query: 424  YAIPEENRGQQFDVPKEAPGGLP----------FMKPEDYQYFGALLNEEDEEELSPEEQ 483
            Y +P+E   Q+  + KE P  LP          F K ED +YFG LL  EDE +L+  E 
Sbjct: 454  YHVPQE---QELPLEKELPAALPTEIPGVGDLAFFKQEDVKYFGKLLKVEDEAKLTIAEL 513

Query: 484  KERKIMKLLLKVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLL 543
            +ERKI++LLLKVKNGTPP RK+ALRQLTD+AR+FGA  LFN+ILPLLM+ TLEDQERHLL
Sbjct: 514  RERKILRLLLKVKNGTPPMRKSALRQLTDQARDFGAAALFNQILPLLMERTLEDQERHLL 573

Query: 544  VKVIDRVLYKLDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAA 603
            VKVIDR+LYKLD+LVRP+ HKILVVIEPLLIDEDYYAR EGREIISNL+KA+GLA MIA 
Sbjct: 574  VKVIDRILYKLDDLVRPFTHKILVVIEPLLIDEDYYARAEGREIISNLAKASGLAHMIAT 633

Query: 604  MRPDIDNIDEYVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIA 663
            MRPDID++DEYVRNTTARAFSVVASALG+PALLPFLKAVC+SKKSWQARHTG++I+QQIA
Sbjct: 634  MRPDIDHVDEYVRNTTARAFSVVASALGVPALLPFLKAVCRSKKSWQARHTGVRIIQQIA 693

Query: 664  ILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLW 723
            +L+GC++LPHL++LV+ I HGL DE QKVR +TALSL+ALAEAA PYGIE+FDSVLKPLW
Sbjct: 694  LLLGCSILPHLKNLVDCIGHGLEDEQQKVRIMTALSLSALAEAATPYGIEAFDSVLKPLW 753

Query: 724  KGIRSHRGKVLAAFLKAIGFIIPLMDALYACYYTKEVMYILIREFQSPDEEMKRF----- 783
             G++ HRGK LAAFLKA GFIIPLM+  YA ++T+ +M IL+REF SPDEEMK+      
Sbjct: 754  SGVQRHRGKSLAAFLKATGFIIPLMEPEYASHFTRRIMKILLREFNSPDEEMKKIVLKVV 813

Query: 784  -----TEGVEADYIRNDILPEFFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGR 843
                 T+GV  +Y+R D+LPEFF  FW RRMA DRR+YKQ+V+TTV +A +VG   IV R
Sbjct: 814  SQCASTDGVTPEYLRTDVLPEFFHCFWSRRMASDRRSYKQVVETTVVLAQQVGSRQIVER 873

Query: 844  VVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVML 903
            VV + KDESEPYR+M  ET++KV+ +LG S+ID RLEELL+DG+L+AFQEQ+ ++  V+L
Sbjct: 874  VVNNFKDESEPYRKMTAETVDKVIGSLGVSEIDERLEELLLDGVLFAFQEQSVEE-KVIL 933

Query: 904  NGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLM 963
              F  VVN+LG R KPYLPQI  TI +RLNNKSA VR+QAADL+S I +V+K C EE LM
Sbjct: 934  TCFSTVVNALGTRCKPYLPQIVSTILYRLNNKSANVREQAADLVSSITIVLKACGEEALM 993

Query: 964  GHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKV 1023
              LGVVLYEYLGEEYPEVLGSILGA+KAIV+V+GM+ M PPI+DLLPRLTPIL+NRHEKV
Sbjct: 994  RKLGVVLYEYLGEEYPEVLGSILGAIKAIVSVVGMSSMQPPIRDLLPRLTPILRNRHEKV 1053

Query: 1024 QENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQ 1083
            QEN IDLVG+IADRG+E+V AREWMRICFEL++MLKAHKK IRRA VNTFGYI+KAIGPQ
Sbjct: 1054 QENTIDLVGKIADRGSEYVSAREWMRICFELIDMLKAHKKSIRRAAVNTFGYISKAIGPQ 1113

Query: 1084 DVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSL 1143
            DVLATLLNNLKVQERQNRVCTTVAIAIVAETC PFTV+PALM +YR PE+NVQNGVLKSL
Sbjct: 1114 DVLATLLNNLKVQERQNRVCTTVAIAIVAETCMPFTVVPALMADYRTPEMNVQNGVLKSL 1173

Query: 1144 SFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHL 1203
            +F+FEYIGE  +DY+YA+TPLL DALMDRD VHRQTAAS +KH++LG  GLG EDA++HL
Sbjct: 1174 AFMFEYIGEQARDYVYAITPLLADALMDRDAVHRQTAASVIKHLSLGCVGLGVEDAMIHL 1205

Query: 1204 LNYVWPNIFETSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNS 1253
            LN +WPNI E SPHVINAV E I+G+R  +G   ++ Y +QGLFHP+RKVR  YW  YNS
Sbjct: 1234 LNILWPNILEESPHVINAVREGIDGIRNCIGVGPIMAYLVQGLFHPSRKVRNTYWTSYNS 1205

[Close]

BLAST of IVF0004484 vs. ExPASy Swiss-Prot
Match: P49955 (U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HSH155 PE=1 SV=1)

HSP 1 Score: 904.0 bits (2335), Expect = 1.8e-261
Identity = 455/840 (54.17%), Postives = 598/840 (71.19%), Query Frame = 0


Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            L F KP D++YF  +++++  +EL+ +E+KER +  LLLK+KNG    R+T++R LTDKA
Sbjct: 133  LMFFKPSDHKYFADVISKKPIDELNKDEKKERTLSMLLLKIKNGNTASRRTSMRILTDKA 192

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
              FG   +FNR+LP+L+  +LEDQERHL++K IDRVLY+L +L +PYVHKILVV  PLLI
Sbjct: 193  VTFGPEMIFNRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTKPYVHKILVVAAPLLI 252

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DED   R  G+EII+NLS  AGL T++  MRPDI+N DEYVRN T+RA +VVA ALG+  
Sbjct: 253  DEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRAAAVVAKALGVNQ 312

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPF+ A C S+KSW+ARHTGIKIVQQI IL+G  VL HL  L+  I+  L D++  VR 
Sbjct: 313  LLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIKDCLMDDHVPVRI 372

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            +TA +L+ LAE + PYGIE F+ VL+PLWKGIRSHRGKVL++FLKA+G +IPLMD  YA 
Sbjct: 373  VTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRSHRGKVLSSFLKAVGSMIPLMDPEYAG 432

Query: 721  YYTKEVMYILIREFQSPDEEMKR----------FTEGVEADYIRNDILPEFFRNFWVRRM 780
            YYT E M I+ REF SPD+EMK+            E +   ++R +I PEFF+ FWVRR+
Sbjct: 433  YYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEIAPEFFQKFWVRRV 492

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDR   K +  TTV +A K+G +  + +++  L+DE+EP+R M +  + + V  LG +D
Sbjct: 493  ALDRPLNKVVTYTTVTLAKKLGCSYTIDKLLTPLRDEAEPFRTMAVHAVTRTVNLLGTAD 552

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            +D RLE  LID +L AFQEQT+ D +++  GFGAV  SL  R+KP+L  I  TI   L +
Sbjct: 553  LDERLETRLIDALLIAFQEQTNSD-SIIFKGFGAVTVSLDIRMKPFLAPIVSTILNHLKH 612

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            K+  VRQ AADL + +  V+K C E +++  L ++LYE LGE YPEVLGSI+ A+  I +
Sbjct: 613  KTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 672

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            V+ + K+ PPI  +LP LTPIL+N+H KV+ N I  VG I      + P +EWMRICFEL
Sbjct: 673  VMDLDKLQPPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLAPTYAPPKEWMRICFEL 732

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LE+LK+  K IRR+   TFG+IA+AIGP DVL  LLNNLKVQERQ RVCT VAI IVA+ 
Sbjct: 733  LELLKSTNKEIRRSANATFGFIAEAIGPHDVLVALLNNLKVQERQLRVCTAVAIGIVAKV 792

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            C P+ VLP +MNEY  PE NVQNGVLK++SF+FEYIG M KDYIY +TPLLEDAL DRDL
Sbjct: 793  CGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFITPLLEDALTDRDL 852

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTA++ + H+AL  +G G EDA +HL+N + PNIFETSPH I  ++E +E +  ALG
Sbjct: 853  VHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALG 912

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1251
              + +NY   GLFHPA+ VR+ +W++YN++Y+  QDA+V  YP   D         +L +
Sbjct: 913  PGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPVTPDNNEEYIEELDLVL 971

[Close]

BLAST of IVF0004484 vs. ExPASy TrEMBL
Match: A0A5A7V3S1 (Splicing factor 3B subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00140 PE=3 SV=1)

HSP 1 Score: 2439.1 bits (6320), Expect = 0.0e+00
Identity = 1250/1262 (99.05%), Postives = 1251/1262 (99.13%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1253
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

[Close]

BLAST of IVF0004484 vs. ExPASy TrEMBL
Match: A0A1S3CHY1 (splicing factor 3B subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501154 PE=3 SV=1)

HSP 1 Score: 2439.1 bits (6320), Expect = 0.0e+00
Identity = 1250/1262 (99.05%), Postives = 1251/1262 (99.13%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1253
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

[Close]

BLAST of IVF0004484 vs. ExPASy TrEMBL
Match: A0A0A0KVS0 (TOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G110070 PE=3 SV=1)

HSP 1 Score: 2434.4 bits (6308), Expect = 0.0e+00
Identity = 1247/1262 (98.81%), Postives = 1250/1262 (99.05%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            GRKLASYTAPKSLLKEMPRGVDED+DLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDEDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKE +ASAAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKEPLASAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1253
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

[Close]

BLAST of IVF0004484 vs. ExPASy TrEMBL
Match: A0A6J1CHE5 (splicing factor 3B subunit 1 OS=Momordica charantia OX=3673 GN=LOC111011453 PE=3 SV=1)

HSP 1 Score: 2403.6 bits (6228), Expect = 0.0e+00
Identity = 1228/1262 (97.31%), Postives = 1242/1262 (98.42%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLES  N V
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG +EDDD+G+KKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGSEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKRE+EETLRAIAKKKEEEEAAKASGE+PKES A+AAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREKEETLRAIAKKKEEEEAAKASGERPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQD+GGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDEGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKL GMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLPGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1253
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG+QDALV++YPALEDGENNVY+RPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVSAYPALEDGENNVYNRPELVM 1260

[Close]

BLAST of IVF0004484 vs. ExPASy TrEMBL
Match: A0A6J1FMX5 (splicing factor 3B subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446900 PE=3 SV=1)

HSP 1 Score: 2402.9 bits (6226), Expect = 0.0e+00
Identity = 1229/1262 (97.39%), Postives = 1240/1262 (98.26%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEER+KMEQQLASLNSVTFDTDLYG NDKAGYVTSIPVNEDDENLE+  N V
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG +EDDD+G+KKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES A+AAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPM 
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMA 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1253
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVA+YPALEDG+NNVYSRPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

[Close]

BLAST of IVF0004484 vs. NCBI nr
Match: XP_008462876.1 (PREDICTED: splicing factor 3B subunit 1 [Cucumis melo] >KAA0061166.1 splicing factor 3B subunit 1 [Cucumis melo var. makuwa] >TYK29928.1 splicing factor 3B subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 2431 bits (6300), Expect = 0.0
Identity = 1250/1262 (99.05%), Postives = 1251/1262 (99.13%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1252
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

[Close]

BLAST of IVF0004484 vs. NCBI nr
Match: XP_004137159.1 (splicing factor 3B subunit 1 [Cucumis sativus] >KGN53720.1 hypothetical protein Csa_014578 [Cucumis sativus])

HSP 1 Score: 2426 bits (6288), Expect = 0.0
Identity = 1247/1262 (98.81%), Postives = 1250/1262 (99.05%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
            GRKLASYTAPKSLLKEMPRGVDED+DLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   GRKLASYTAPKSLLKEMPRGVDEDEDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKE +ASAAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKEPLASAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1252
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1260

[Close]

BLAST of IVF0004484 vs. NCBI nr
Match: XP_038877302.1 (splicing factor 3B subunit 1 [Benincasa hispida])

HSP 1 Score: 2414 bits (6256), Expect = 0.0
Identity = 1242/1262 (98.42%), Postives = 1245/1262 (98.65%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLES  N V
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG DEDDDLG+KKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGDEDDDLGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVA+AAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1252
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELVM 1260

[Close]

BLAST of IVF0004484 vs. NCBI nr
Match: XP_022140896.1 (splicing factor 3B subunit 1 [Momordica charantia] >XP_022140897.1 splicing factor 3B subunit 1 [Momordica charantia])

HSP 1 Score: 2395 bits (6208), Expect = 0.0
Identity = 1228/1262 (97.31%), Postives = 1242/1262 (98.42%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEERRKMEQQLASL+SVTFDTDLYG NDKAGYVTSIPVNEDDENLES  N V
Sbjct: 1    MDLEIAKTQEERRKMEQQLASLSSVTFDTDLYGSNDKAGYVTSIPVNEDDENLESLDNEV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG +EDDD+G+KKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGSEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKRE+EETLRAIAKKKEEEEAAKASGE+PKES A+AAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREKEETLRAIAKKKEEEEAAKASGERPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQD+GGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDEGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKL GMATPTPKRQRSRWDETPATMGSATPMP
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLPGMATPTPKRQRSRWDETPATMGSATPMP 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1252
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG+QDALV++YPALEDGENNVY+RPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVSAYPALEDGENNVYNRPELVM 1260

[Close]

BLAST of IVF0004484 vs. NCBI nr
Match: XP_022941591.1 (splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022941592.1 splicing factor 3B subunit 1-like [Cucurbita moschata] >KAG7030903.1 Splicing factor 3B subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2395 bits (6206), Expect = 0.0
Identity = 1229/1262 (97.39%), Postives = 1240/1262 (98.26%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSIPVNEDDENLESQVNVV 60
            MDLEIAKTQEER+KMEQQLASLNSVTFDTDLYG NDKAGYVTSIPVNEDDENLE+  N V
Sbjct: 1    MDLEIAKTQEERKKMEQQLASLNSVTFDTDLYGDNDKAGYVTSIPVNEDDENLEALDNEV 60

Query: 61   GRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120
             RKLASYTAPKSLLKEMPRG +EDDD+G+KKPQRIIDREDDYRKRRLNRVISPERHDAFA
Sbjct: 61   ARKLASYTAPKSLLKEMPRGGEEDDDMGFKKPQRIIDREDDYRKRRLNRVISPERHDAFA 120

Query: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESVASAAAP 180
            AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKES A+AAAP
Sbjct: 121  AGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKESAAAAAAP 180

Query: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240
            QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP
Sbjct: 181  QKRRNRWDQSQDDGGAKKAKTSDWDLPDTTPGRWDATPGRVGDATPGVGRRNRWDETPTP 240

Query: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMP 300
            GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPM 
Sbjct: 241  GRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETPATMGSATPMA 300

Query: 301  GATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEERNRPLTDEEL 360
            GATPAAAFTPGVTPVGGVELATPTPGA+NLRGPMTPEQYNLMRWERDIEERNRPL+DEEL
Sbjct: 301  GATPAAAFTPGVTPVGGVELATPTPGAVNLRGPMTPEQYNLMRWERDIEERNRPLSDEEL 360

Query: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420
            DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG
Sbjct: 361  DAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQFDVPKEAPGG 420

Query: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480
            LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA
Sbjct: 421  LPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKA 480

Query: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540
            REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI
Sbjct: 481  REFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLI 540

Query: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600
            DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA
Sbjct: 541  DEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPA 600

Query: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660
            LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT
Sbjct: 601  LLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRT 660

Query: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720
            ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC
Sbjct: 661  ITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDALYAC 720

Query: 721  YYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPEFFRNFWVRRM 780
            YYTKEVMYILIREFQSPDEEMK+           TEGVEADYIRNDILPEFFRNFWVRRM
Sbjct: 721  YYTKEVMYILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRNDILPEFFRNFWVRRM 780

Query: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840
            ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD
Sbjct: 781  ALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASD 840

Query: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900
            IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN
Sbjct: 841  IDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNN 900

Query: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960
            KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN
Sbjct: 901  KSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVN 960

Query: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020
            VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL
Sbjct: 961  VIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFEL 1020

Query: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080
            LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET
Sbjct: 1021 LEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAET 1080

Query: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140
            CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL
Sbjct: 1081 CSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDL 1140

Query: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200
            VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG
Sbjct: 1141 VHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGMRVALG 1200

Query: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGENNVYSRPELAM 1252
            AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIG QD LVA+YPALEDG+NNVYSRPEL M
Sbjct: 1201 AAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGGQDTLVAAYPALEDGDNNVYSRPELVM 1260

[Close]

BLAST of IVF0004484 vs. TAIR 10
Match: AT5G64270.1 (splicing factor, putative )

HSP 1 Score: 2123.2 bits (5500), Expect = 0.0e+00
Identity = 1090/1272 (85.69%), Postives = 1167/1272 (91.75%), Query Frame = 0


Query: 1    MDLEIAKTQEERRKMEQQLASLNSVTFDTDLYGGNDKAGYVTSI-PVNEDDENLESQVNV 60
            +D EIAKTQEERRKME  LASL S+TFD DLYGGND+A Y TSI P  EDD NL++  ++
Sbjct: 4    LDPEIAKTQEERRKMEADLASLTSLTFDRDLYGGNDRASYSTSIAPNEEDDANLDTTGSL 63

Query: 61   VGRKLASYTAPKSLLKEMPRGVDEDDDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAF 120
            V ++LASYTAP+S+L ++ R  +EDDD+G+K  Q I +RE +YR RRLNRV+SP+R DAF
Sbjct: 64   VAQRLASYTAPRSILNDVARPHNEDDDVGFKPRQSIAEREGEYRNRRLNRVLSPDRVDAF 123

Query: 121  AAGEKTPDPSVRTYAEVMREEALKREREETLRAIAKKKEEEEAAKASGEK---PKESVAS 180
            A G+KTPD SVRTY + MRE AL+RE+EET+R IAKKK+EEE A A  +K   P    +S
Sbjct: 124  AMGDKTPDASVRTYTDHMRETALQREKEETMRLIAKKKKEEEEAAAKHQKDSAPPPPASS 183

Query: 181  AAAPQKRRNRWDQSQDDG-GAKKAK--TSDWDLPDTTP--GRWDA-TPGRVGDATPGVGR 240
            +++  KRR+RWD  ++DG  AKKAK  +SDWDLPD  P  GRWDA TPGRV DATP  GR
Sbjct: 184  SSSSSKRRHRWDLPEEDGAAAKKAKAASSDWDLPDAAPGIGRWDAPTPGRVSDATPSAGR 243

Query: 241  RNRWDETPTPGRLADLDATPAGGVTPGATPAGMTWDATPKLAGMATPTPKRQRSRWDETP 300
            RNRWDETPTPGR+ D DATP GGVTPGATP+G+TWD      G+ATPTPKRQRSRWDETP
Sbjct: 244  RNRWDETPTPGRVTDSDATPGGGVTPGATPSGVTWD------GLATPTPKRQRSRWDETP 303

Query: 301  ATMGSATPMPGATPAAAFTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLMRWERDIEE 360
            ATMGSATPM G TP AA+TPGVTP+GG+++ATPTPG +  RGPMTPEQ N+ RWE+DIEE
Sbjct: 304  ATMGSATPMGGVTPGAAYTPGVTPIGGIDMATPTPGQLIFRGPMTPEQLNMQRWEKDIEE 363

Query: 361  RNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPMGTPLYAIPEENRGQQ 420
            RNRPL+DEELDAMFP++GYK+LDPPA+YVPIRTPARKL  TPTPM TP Y IPEENRGQQ
Sbjct: 364  RNRPLSDEELDAMFPKDGYKVLDPPATYVPIRTPARKLQQTPTPMATPGYVIPEENRGQQ 423

Query: 421  FDVPKEAPGGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRK 480
            +DVP E PGGLPFMKPEDYQYFG+LLNEE+EEELSPEEQKERKIMKLLLKVKNGTPPQRK
Sbjct: 424  YDVPPEVPGGLPFMKPEDYQYFGSLLNEENEEELSPEEQKERKIMKLLLKVKNGTPPQRK 483

Query: 481  TALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHK 540
            TALRQLTDKARE GAGPLFN+ILPLLMQPTLEDQERHLLVKVIDR+LYKLDE+VRPYVHK
Sbjct: 484  TALRQLTDKARELGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRILYKLDEMVRPYVHK 543

Query: 541  ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFS 600
            ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLA+MIAAMRPDIDNIDEYVRNTTARAFS
Sbjct: 544  ILVVIEPLLIDEDYYARVEGREIISNLSKAAGLASMIAAMRPDIDNIDEYVRNTTARAFS 603

Query: 601  VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHG 660
            VVASALGIPALLPFLKAVCQSK+SWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHG
Sbjct: 604  VVASALGIPALLPFLKAVCQSKRSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHG 663

Query: 661  LNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI 720
            L+DENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI
Sbjct: 664  LSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFI 723

Query: 721  IPLMDALYACYYTKEVMYILIREFQSPDEEMKRF----------TEGVEADYIRNDILPE 780
            IPLMDA+YA YYTKEVM ILIREFQSPDEEMK+           TEGVE +YIR+DILPE
Sbjct: 724  IPLMDAIYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPE 783

Query: 781  FFRNFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIE 840
            FFRNFW R+MAL+RRNYKQLV+TTVE+ANKVGVADIVGRVVEDLKDESE YRRMVMETI+
Sbjct: 784  FFRNFWTRKMALERRNYKQLVETTVEVANKVGVADIVGRVVEDLKDESEQYRRMVMETID 843

Query: 841  KVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQI 900
            KVV NLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVN+LGQRVKPYLPQI
Sbjct: 844  KVVTNLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVKPYLPQI 903

Query: 901  CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGS 960
            CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQC EEQLMGHLGVVLYEYLGEEYPEVLGS
Sbjct: 904  CGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGS 963

Query: 961  ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA 1020
            ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA
Sbjct: 964  ILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPA 1023

Query: 1021 REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT 1080
            REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT
Sbjct: 1024 REWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCT 1083

Query: 1081 TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL 1140
            TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL
Sbjct: 1084 TVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPL 1143

Query: 1141 LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVME 1200
            LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLN++WPNIFETSPHVINAVME
Sbjct: 1144 LEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFETSPHVINAVME 1203

Query: 1201 AIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVASYPALEDGEN 1253
            AIEGMRVALGAAV+LNYCLQGLFHPARKVREVYWKIYNSLYIGAQD LVA+YP LED +N
Sbjct: 1204 AIEGMRVALGAAVILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDTLVAAYPVLEDEQN 1263

The following BLAST results are available for this feature:

BLAST of IVF0004484 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O75533	0.0e+00	69.09	Splicing factor 3B subunit 1 OS=Homo sapiens OX=9606 GN=SF3B1 PE=1 SV=3	[more]
Q99NB9	0.0e+00	69.02	Splicing factor 3B subunit 1 OS=Mus musculus OX=10090 GN=Sf3b1 PE=1 SV=1	[more]
O57683	0.0e+00	68.92	Splicing factor 3B subunit 1 OS=Xenopus laevis OX=8355 GN=sf3b1 PE=2 SV=1	[more]
Q10178	0.0e+00	54.52	U2 snRNP component prp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
P49955	1.8e-261	54.17	U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288...	[more]

BLAST of IVF0004484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3S1	0.0e+00	99.05	Splicing factor 3B subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CHY1	0.0e+00	99.05	splicing factor 3B subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501154 PE=3 SV=1	[more]
A0A0A0KVS0	0.0e+00	98.81	TOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G110070 PE=3 SV...	[more]
A0A6J1CHE5	0.0e+00	97.31	splicing factor 3B subunit 1 OS=Momordica charantia OX=3673 GN=LOC111011453 PE=3...	[more]
A0A6J1FMX5	0.0e+00	97.39	splicing factor 3B subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446900 ...	[more]

BLAST of IVF0004484 vs. NCBI nr


Match Name	Identity	Description
XP_008462876.1	99.05	PREDICTED: splicing factor 3B subunit 1 [Cucumis melo] >KAA0061166.1 splicing fa...	[more]
XP_004137159.1	98.81	splicing factor 3B subunit 1 [Cucumis sativus] >KGN53720.1 hypothetical protein ...	[more]
XP_038877302.1	98.42	splicing factor 3B subunit 1 [Benincasa hispida]	[more]
XP_022140896.1	97.31	splicing factor 3B subunit 1 [Momordica charantia] >XP_022140897.1 splicing fact...	[more]
XP_022941591.1	97.39	splicing factor 3B subunit 1-like [Cucurbita moschata] >XP_022941592.1 splicing ...	[more]

BLAST of IVF0004484 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64270.1	0.0e+00	85.69	splicing factor, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..297
None	No IPR available	PANTHER	PTHR12097:SF1	BNAA06G23400D PROTEIN	coord: 2..1252
IPR034085	TOG domain	SMART	SM01349	TOG_3	coord: 829..1064 e-value: 0.0032 score: 19.0
IPR015016	Splicing factor 3B subunit 1	PFAM	PF08920	SF3b1	coord: 277..407 e-value: 1.1E-44 score: 152.0
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 490..991 e-value: 1.2E-48 score: 168.1
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1009..1221 e-value: 4.3E-12 score: 47.6
IPR038737	Splicing factor 3B subunit 1-like	PANTHER	PTHR12097	SPLICING FACTOR 3B, SUBUNIT 1-RELATED	coord: 2..1252
IPR021133	HEAT, type 2	PROSITE	PS50077	HEAT_REPEAT	coord: 643..681 score: 8.8312
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 457..1240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004484.1	IVF0004484.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000245	spliceosomal complex assembly
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0005689	U12-type spliceosomal complex
cellular_component	GO:0005686	U2 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0003729	mRNA binding