|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGTTGTTCGAGTGTAGCCGTTTGAGTGCAGCTGATTTGTTAACATCGAGGGTCGTCGCTAGAGTCGATCTTTGTCAAAGTTCATCAGCAGCAGTCGTCAGAGTCGATCGTCGTCGAAGTTCATTAGCAGTCATCGTCAGAGTCAGTCGTCGTTGA mRNA sequence ATGGAGTTGTTCGAGTGTAGCCGTTTGAGTGCAGCTGATTTGTTAACATCGAGGGTCGTCGCTAGAGTCGATCTTTGTCAAAGTTCATCAGCAGCAGTCGTCAGAGTCGATCGTCGTCGAAGTTCATTAGCAGTCATCGTCAGAGTCAGTCGTCGTTGA Coding sequence (CDS) ATGGAGTTGTTCGAGTGTAGCCGTTTGAGTGCAGCTGATTTGTTAACATCGAGGGTCGTCGCTAGAGTCGATCTTTGTCAAAGTTCATCAGCAGCAGTCGTCAGAGTCGATCGTCGTCGAAGTTCATTAGCAGTCATCGTCAGAGTCAGTCGTCGTTGA Protein sequence MELFECSRLSAADLLTSRVVARVDLCQSSSAAVVRVDRRRSSLAVIVRVSRR
Homology
BLAST of IVF0004479 vs. ExPASy TrEMBL
Match: A0A5D3CV99 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8046G00030 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.0e-12 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
Query: 1 MELFECSRLSAADLLTSRVVARVDLCQSSSAAVVRVDRRRSSLAVIVR 49
MELFECSRLSAADLLTSRVVARVDL QSSSAAVVRVDRRRSSLAVIVR
Sbjct: 1 MELFECSRLSAADLLTSRVVARVDLFQSSSAAVVRVDRRRSSLAVIVR 48
BLAST of IVF0004479 vs. NCBI nr
Match: KAA0045021.1 (hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa] >TYK14179.1 hypothetical protein E5676_scaffold8046G00030 [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 6.19e-18 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
Query: 1 MELFECSRLSAADLLTSRVVARVDLCQSSSAAVVRVDRRRSSLAVIVR 48
MELFECSRLSAADLLTSRVVARVDL QSSSAAVVRVDRRRSSLAVIVR
Sbjct: 1 MELFECSRLSAADLLTSRVVARVDLFQSSSAAVVRVDRRRSSLAVIVR 48
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CV99 | 1.0e-12 | 97.92 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0045021.1 | 6.19e-18 | 97.92 | hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa] >TYK14179... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
