IVF0004465 (gene) Melon (IVF77) v1

Overview


Name	IVF0004465
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Maternal effect embryo arrest 9
Location	chr06: 3584168 .. 3584611 (-)
RNA-Seq Expression	IVF0004465
Synteny	IVF0004465

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCTCATCTCCCACTTCACTTTCCTCTCCGACCAAGTTCTCCACGACAAGAATTTCGACCCCTCTACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGGGTACAAGTCCTGGGCTGCCATCGAGCTCCAACACCAGAATGAGTTTCAGGACGCTGAGATCGCGATGCAGCAGGCTGAGGATTACCTTGATTCCGTCATGGAAGATGCCATGGATGAGTTCAGACGGTTTGAAGAGGAGTTTGATCGGATGGCTGAAGCTGAGCTACAACAACTCCTTGATAAGTCTGAGAAGGCTCGCAAGATGGGTAGTTTGATGGAGAAAGCTGTCTCGGTTGCTTCTAAGAGGTATATGGAGGCAGCTATGAATTCTGCCACTGCTTCCATGAGATCTGCCTGGAAGGCTATTTCTTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCACTTCACTTTCCTCTCCGACCAAGTTCTCCACGACAAGAATTTCGACCCCTCTACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGGGTACAAGTCCTGGGCTGCCATCGAGCTCCAACACCAGAATGAGTTTCAGGACGCTGAGATCGCGATGCAGCAGGCTGAGGATTACCTTGATTCCGAGTTTGATCGGATGGCTGAAGCTGAGCTACAACAACTCCTTGATAAGTCTGAGAAGGCTCGCAAGATGGGTAGTTTGATGGAGAAAGCTGTCTCGGTTGCTTCTAAGAGGTATATGGAGGCAGCTATGAATTCTGCCACTGCTTCCATGAGATCTGCCTGGAAGGCTATTTCTTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCACTTCACTTTCCTCTCCGACCAAGTTCTCCACGACAAGAATTTCGACCCCTCTACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGGGTACAAGTCCTGGGCTGCCATCGAGCTCCAACACCAGAATGAGTTTCAGGACGCTGAGATCGCGATGCAGCAGGCTGAGGATTACCTTGATTCCGAGTTTGATCGGATGGCTGAAGCTGAGCTACAACAACTCCTTGATAAGTCTGAGAAGGCTCGCAAGATGGGTAGTTTGATGGAGAAAGCTGTCTCGGTTGCTTCTAAGAGGTATATGGAGGCAGCTATGAATTCTGCCACTGCTTCCATGAGATCTGCCTGGAAGGCTATTTCTTCCAATAAGGTTCATCCTTCTTGA

Protein sequence

MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQQAEDYLDSEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Homology

[Close]

BLAST of IVF0004465 vs. ExPASy TrEMBL
Match: A0A5D3BKS0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00220 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.8e-60
Identity = 133/147 (90.48%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ
Sbjct: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 134
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. ExPASy TrEMBL
Match: A0A0A0LAB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 128/147 (87.07%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSDQ LHDKNFDPSTIEDLMKLFEIE YKSWAAIELQHQNE QDAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQQLLDKSEKARKMGSLMEKA SVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 134
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. ExPASy TrEMBL
Match: A0A6J1FR93 (uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC111447720 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-52
Identity = 120/147 (81.63%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSD+ L DKNFDPSTIEDLMKLFEIE Y SWAA+ELQHQNE +DAEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQ L+DKSEKARKMGSLMEKA +VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 134
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. ExPASy TrEMBL
Match: A0A6J1JCA1 (uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52
Identity = 120/147 (81.63%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSDQ LHDKNFDPSTIEDLMKLFEIE YKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAE ELQ+L+DKSEKARKMGSLMEKA ++ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 134
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. ExPASy TrEMBL
Match: A0A6J1E4Z9 (uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC111430656 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 120/147 (81.63%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSDQ L DKNFDPSTIEDLMKLFEIE YKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           +AEDYLDS              EFDRMAEAELQ+L+DKSEKARKMGSLMEKA +VASKRY
Sbjct: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 134
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. NCBI nr
Match: TYJ99746.1 (uncharacterized protein E5676_scaffold252G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (602), Expect = 1.20e-77
Identity = 133/147 (90.48%), Postives = 133/147 (90.48%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ
Sbjct: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 133
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. NCBI nr
Match: XP_004149957.1 (uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical protein Csa_011667 [Cucumis sativus])

HSP 1 Score: 225 bits (573), Expect = 3.15e-73
Identity = 128/147 (87.07%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSDQ LHDKNFDPSTIEDLMKLFEIE YKSWAAIELQHQNE QDAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQQLLDKSEKARKMGSLMEKA SVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 133
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. NCBI nr
Match: XP_038885707.1 (uncharacterized protein LOC120075975 [Benincasa hispida])

HSP 1 Score: 219 bits (559), Expect = 4.28e-71
Identity = 124/147 (84.35%), Postives = 127/147 (86.39%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSDQ LHDKNFDPSTIEDLMKLFEIE YKSWAA+ELQHQNE QDAEIAM 
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAMELQHQNEVQDAEIAMH 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQ+LLDKSEKARKMGSLMEKA +VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELLDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 133
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. NCBI nr
Match: XP_023551868.1 (uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213 bits (542), Expect = 1.67e-68
Identity = 122/147 (82.99%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSDQ LHDKNFDPSTIEDLMKLFEIE YKSWAA ELQ QNE Q+AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQ+L+DKSEKARKMGSLMEKA +VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 133
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. NCBI nr
Match: XP_022942791.1 (uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 uncharacterized protein LOC111447720 [Cucurbita moschata])

HSP 1 Score: 212 bits (539), Expect = 4.78e-68
Identity = 120/147 (81.63%), Postives = 125/147 (85.03%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALIS FTFLSD+ L DKNFDPSTIEDLMKLFEIE Y SWAA+ELQHQNE +DAEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDYLDS--------------EFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           QAEDYLDS              EFDRMAEAELQ L+DKSEKARKMGSLMEKA +VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 133
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of IVF0004465 vs. TAIR 10
Match: AT1G60870.1 (maternal effect embryo arrest 9 )

HSP 1 Score: 144.8 bits (364), Expect = 4.9e-35
Identity = 81/147 (55.10%), Postives = 105/147 (71.43%), Query Frame = 0


Query: 1   MEALISHFTFLSDQVLHDKNFDPSTIEDLMKLFEIEGYKSWAAIELQHQNEFQDAEIAMQ 60
           MEALI HFT LSDQ L DK FDPS IEDLM+LFE++ YK+WAA+E + Q E ++AE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDYLD--------------SEFDRMAEAELQQLLDKSEKARKMGSLMEKAVSVASKRY 120
           +AE  LD               E +RM  AEL++L +K+E AR+ G+LMEKA +VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 134
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

The following BLAST results are available for this feature:

BLAST of IVF0004465 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004465 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKS0	5.8e-60	90.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LAB6	1.3e-56	87.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1	[more]
A0A6J1FR93	1.2e-52	81.63	uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A6J1JCA1	2.0e-52	81.63	uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158...	[more]
A0A6J1E4Z9	1.3e-51	81.63	uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]

BLAST of IVF0004465 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99746.1	1.20e-77	90.48	uncharacterized protein E5676_scaffold252G00220 [Cucumis melo var. makuwa]	[more]
XP_004149957.1	3.15e-73	87.07	uncharacterized protein LOC101218253 [Cucumis sativus] >KGN57562.1 hypothetical ...	[more]
XP_038885707.1	4.28e-71	84.35	uncharacterized protein LOC120075975 [Benincasa hispida]	[more]
XP_023551868.1	1.67e-68	82.99	uncharacterized protein LOC111809710 [Cucurbita pepo subsp. pepo]	[more]
XP_022942791.1	4.78e-68	81.63	uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 unchar...	[more]

BLAST of IVF0004465 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60870.1	4.9e-35	55.10	maternal effect embryo arrest 9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	PANTHER	PTHR37707	MATERNAL EFFECT EMBRYO ARREST 9	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004465.1	IVF0004465.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009555	pollen development
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0003676	nucleic acid binding