IVF0004443 (gene) Melon (IVF77) v1

Overview
NameIVF0004443
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr11: 27150587 .. 27150997 (+)
RNA-Seq ExpressionIVF0004443
SyntenyIVF0004443
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCTTGTTTGAGCAAAAAGTAGAAGACTTTACCTTCAATTTCTTCCACCTCTGTACCTTCACCTCCAGATCCCACCTCTTCCAACGGCTGCACCAAACCCATCATTGCAATTTGTCAGCCTCCTACCACTGATGTGCAACTCAAGACCTGCAACAAAACAGGGGAGGAAAATGGTGAGAGAAAAGAAGAAAGAAGTGAGTACCCTGTGAAGAAGGAGATTTTTGTGATTAAGCACAGAAAAATCCATGATGGAAGAGATAAGAATGGGGGTTCTCTTGTTCCATCTCAAGAGGAGAATGGTCATGTTTTCTCTGCTGCTACTCCTACTGTGTCTTCTTCTTCCTGTGAAATTTTGGAGTCTGGAGCTGTGGGGGAAAATTTGAAGGTGGGTTTGGTCAGAACTTAG

mRNA sequence

ATGGATCCCACCTCTTCCAACGGCTGCACCAAACCCATCATTGCAATTTGTCAGCCTCCTACCACTGATGTGCAACTCAAGACCTGCAACAAAACAGGGGAGGAAAATGGTGAGAGAAAAGAAGAAAGAAGTGAGTACCCTGTGAAGAAGGAGATTTTTGTGATTAAGCACAGAAAAATCCATGATGGAAGAGATAAGAATGGGGGTTCTCTTGTTCCATCTCAAGAGGAGAATGGTCATGTTTTCTCTGCTGCTACTCCTACTGTGTCTTCTTCTTCCTGTGAAATTTTGGAGTCTGGAGCTGTGGGGGAAAATTTGAAGGTGGGTTTGGTCAGAACTTAG

Coding sequence (CDS)

ATGGATCCCACCTCTTCCAACGGCTGCACCAAACCCATCATTGCAATTTGTCAGCCTCCTACCACTGATGTGCAACTCAAGACCTGCAACAAAACAGGGGAGGAAAATGGTGAGAGAAAAGAAGAAAGAAGTGAGTACCCTGTGAAGAAGGAGATTTTTGTGATTAAGCACAGAAAAATCCATGATGGAAGAGATAAGAATGGGGGTTCTCTTGTTCCATCTCAAGAGGAGAATGGTCATGTTTTCTCTGCTGCTACTCCTACTGTGTCTTCTTCTTCCTGTGAAATTTTGGAGTCTGGAGCTGTGGGGGAAAATTTGAAGGTGGGTTTGGTCAGAACTTAG

Protein sequence

MDPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIHDGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT
Homology
[Close]
BLAST of IVF0004443 vs. ExPASy TrEMBL
Match: A0A5A7UU62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00270 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.8e-53
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MDPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKI 60
           MDPTSSNGCTKPII ICQPPTTDVQLK CNKTGEENGERKEERSEYPVKKE+FVIKHRK 
Sbjct: 1   MDPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKS 60

Query: 61  HDGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 114
           HDGRDKNGGSLVPSQE NGHVFSA TPTVSSSSCEILESGA+GENLKVGLVRT
Sbjct: 61  HDGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113

[Close]
BLAST of IVF0004443 vs. ExPASy TrEMBL
Match: A0A5D3D646 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00660 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTSSN CTKPII I QPPTTDVQLKTCNKTGEENGERKEERSEYPVKKE+FVIKHRK H
Sbjct: 25  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 114
           DGRDKNGGSLVPSQE NGH+FSAATPTVSSSSCEILESGAVGEN+KVGLVRT
Sbjct: 85  DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 136

[Close]
BLAST of IVF0004443 vs. ExPASy TrEMBL
Match: A0A1S3CIK4 (uncharacterized protein At1g65710 OS=Cucumis melo OX=3656 GN=LOC103501379 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTSSN CTKPII I QPPTTDVQLKTCNKTGEENGERKEERSEYPVKKE+FVIKHRK H
Sbjct: 83  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 142

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 114
           DGRDKNGGSLVPSQE NGH+FSAATPTVSSSSCEILESGAVGEN+KVGLVRT
Sbjct: 143 DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 194

[Close]
BLAST of IVF0004443 vs. ExPASy TrEMBL
Match: A0A0A0KN73 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G429970 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49
Identity = 102/112 (91.07%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTSSNGCTKPII I QPPTTDV LKTCN TGEENGERKEERSEYPVKKE+FVIKHRK H
Sbjct: 25  DPTSSNGCTKPIIPISQPPTTDVPLKTCNITGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 114
           DGRDKNGGSL+PSQ  NGHVFSAATPTVSSSSCEI ESGAVGENLKVGLVRT
Sbjct: 85  DGRDKNGGSLLPSQVGNGHVFSAATPTVSSSSCEIFESGAVGENLKVGLVRT 136

[Close]
BLAST of IVF0004443 vs. ExPASy TrEMBL
Match: A0A6J1K1Y2 (uncharacterized protein At1g65710-like OS=Cucurbita maxima OX=3661 GN=LOC111489382 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30
Identity = 78/112 (69.64%), Postives = 87/112 (77.68%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           D +S NG  KPII I QPPTTD++ K+  KTG+ENGE KEERSEYPVKKE+FVIKHRK H
Sbjct: 23  DTSSCNG-GKPIIPISQPPTTDLKSKSSKKTGQENGEWKEERSEYPVKKEVFVIKHRKSH 82

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 114
           DGRDKNG SL+    E G+        VSSSSCEILESGA+GENLKVGLVRT
Sbjct: 83  DGRDKNGASLLVPPPEEGN--------VSSSSCEILESGALGENLKVGLVRT 125

[Close]
BLAST of IVF0004443 vs. NCBI nr
Match: KAA0058560.1 (uncharacterized protein E6C27_scaffold339G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (549), Expect = 2.07e-70
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MDPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKI 60
           MDPTSSNGCTKPII ICQPPTTDVQLK CNKTGEENGERKEERSEYPVKKE+FVIKHRK 
Sbjct: 1   MDPTSSNGCTKPIIPICQPPTTDVQLKNCNKTGEENGERKEERSEYPVKKEVFVIKHRKS 60

Query: 61  HDGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 113
           HDGRDKNGGSLVPSQE NGHVFSA TPTVSSSSCEILESGA+GENLKVGLVRT
Sbjct: 61  HDGRDKNGGSLVPSQEGNGHVFSAGTPTVSSSSCEILESGAMGENLKVGLVRT 113

[Close]
BLAST of IVF0004443 vs. NCBI nr
Match: KAA0046222.1 (uncharacterized protein E6C27_scaffold284G00130 [Cucumis melo var. makuwa] >TYK18973.1 uncharacterized protein E5676_scaffold418G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 210 bits (534), Expect = 1.85e-61
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTSSN CTKPII I QPPTTDVQLKTCNKTGEENGERKEERSEYPVKKE+FVIKHRK H
Sbjct: 25  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 113
           DGRDKNGGSLVPSQE NGH+FSAATPTVSSSSCEILESGAVGEN+KVGLVRT
Sbjct: 85  DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 136

[Close]
BLAST of IVF0004443 vs. NCBI nr
Match: XP_008463173.1 (PREDICTED: uncharacterized protein At1g65710 [Cucumis melo])

HSP 1 Score: 210 bits (534), Expect = 3.68e-61
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTSSN CTKPII I QPPTTDVQLKTCNKTGEENGERKEERSEYPVKKE+FVIKHRK H
Sbjct: 83  DPTSSNVCTKPIIPISQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEVFVIKHRKSH 142

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 113
           DGRDKNGGSLVPSQE NGH+FSAATPTVSSSSCEILESGAVGEN+KVGLVRT
Sbjct: 143 DGRDKNGGSLVPSQEGNGHIFSAATPTVSSSSCEILESGAVGENMKVGLVRT 194

[Close]
BLAST of IVF0004443 vs. NCBI nr
Match: XP_004140353.1 (uncharacterized protein At1g65710 [Cucumis sativus] >KGN51075.1 hypothetical protein Csa_008204 [Cucumis sativus])

HSP 1 Score: 204 bits (518), Expect = 3.80e-59
Identity = 102/112 (91.07%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTSSNGCTKPII I QPPTTDV LKTCN TGEENGERKEERSEYPVKKE+FVIKHRK H
Sbjct: 25  DPTSSNGCTKPIIPISQPPTTDVPLKTCNITGEENGERKEERSEYPVKKEVFVIKHRKSH 84

Query: 62  DGRDKNGGSLVPSQEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 113
           DGRDKNGGSL+PSQ  NGHVFSAATPTVSSSSCEI ESGAVGENLKVGLVRT
Sbjct: 85  DGRDKNGGSLLPSQVGNGHVFSAATPTVSSSSCEIFESGAVGENLKVGLVRT 136

[Close]
BLAST of IVF0004443 vs. NCBI nr
Match: XP_038882097.1 (uncharacterized protein At1g65710-like [Benincasa hispida])

HSP 1 Score: 180 bits (457), Expect = 1.91e-50
Identity = 95/113 (84.07%), Postives = 100/113 (88.50%), Query Frame = 0 

Query: 2   DPTSSNGCTKPIIAICQPPTTDVQLKTCNKTGEENGERKEERSEYPVKKEIFVIKHRKIH 61
           DPTS NGC KPII + QPPT DV+LKTCN+TGE NGE KEERSEYPVKKE+FVIKHRK H
Sbjct: 25  DPTSCNGC-KPIIPMSQPPTIDVKLKTCNETGEGNGEGKEERSEYPVKKEVFVIKHRKSH 84

Query: 62  DGRDKNGGSLVPS-QEENGHVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 113
           DGRDKNG SL+P  QE NG VFSAATPTVSSSSCEILESGAVGENLKVGLVRT
Sbjct: 85  DGRDKNGASLLPPPQEVNGLVFSAATPTVSSSSCEILESGAVGENLKVGLVRT 136

The following BLAST results are available for this feature:
BLAST of IVF0004443 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0004443 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UU625.8e-5393.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D6464.2e-5192.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CIK44.2e-5192.86uncharacterized protein At1g65710 OS=Cucumis melo OX=3656 GN=LOC103501379 PE=4 S... [more]
A0A0A0KN733.0e-4991.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G429970 PE=4 SV=1[more]
A0A6J1K1Y21.8e-3069.64uncharacterized protein At1g65710-like OS=Cucurbita maxima OX=3661 GN=LOC1114893... [more]
BLAST of IVF0004443 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058560.12.07e-7093.81uncharacterized protein E6C27_scaffold339G00270 [Cucumis melo var. makuwa][more]
KAA0046222.11.85e-6192.86uncharacterized protein E6C27_scaffold284G00130 [Cucumis melo var. makuwa] >TYK1... [more]
XP_008463173.13.68e-6192.86PREDICTED: uncharacterized protein At1g65710 [Cucumis melo][more]
XP_004140353.13.80e-5991.07uncharacterized protein At1g65710 [Cucumis sativus] >KGN51075.1 hypothetical pro... [more]
XP_038882097.11.91e-5084.07uncharacterized protein At1g65710-like [Benincasa hispida][more]
BLAST of IVF0004443 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004443.1IVF0004443.1mRNA