IVF0004425 (gene) Melon (IVF77) v1

Overview


Name	IVF0004425
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ATP-dependent zinc metalloprotease FtsH
Location	chr02: 11011983 .. 11013509 (-)
RNA-Seq Expression	IVF0004425
Synteny	IVF0004425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGTTTTCTTATTTAAACAAACATGAGATTGCAAGTATCTTAATGTAGGAATTTCAGATAGAGGCGTCAACAAATAATAGACTGAGCCGTGTCTTGTTCTGAGTTATCAATCAGATTTCCTTCCATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTTTTATATCTCCTCATATTTTGAGCATCTTATTTCAGGGGGTTTTAATTGTTGGTGAGAGGGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTGAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGTTGTTTTCTTGAATCTTTACTGTTGAAATATGCATATCTAGACTTACTCATATTGGTAGATATATTATAATATTTATTAGTTTGATAATTAACAATTTCGTTAGTAAATGAATGTCCAATAGCTAAGGATAACTCCAAGCCTAGAGTGTTGTAGAAGCTCTCCAATTAGCAATAGTAAAAGAAATATAAAGCTATTATAAAATAGCTTTAGCAAAATGACATCAGGAGGAACCTTTTAAAAACATTATCCCCCGGTTTTCTCATCATATTATTCTCGAGGCTGTAAAATAATGTTCTATATCCTTGCAATCAAAATCTCCTGAAGGATTGTCCGAGCAACCACCACCAAAAAGGCTCTAGCCTTGCACTAGAACTTTCTATAAAATACCAGGAAGGTATATGAGAAGGGTGCACAATTTCCAAGAAGACTAAAAAGGCTGTCCTATTAGTCAGCAAAACTGAAAAAAATAGTAATTTAAGAATTCTCCTGGAGTGCATTTTGCTCATATTGGGACAAAGTTTCCCTGTTGTTATACCTTTATTTTGATTGTTCGGGAATGTTAGGCAGCCTCCATATCTTTTAGTGCCGTTATTCTCTAGATAGAGTGGAATGCTAAAGTCCATTGTGTTAATGCTACTAGAGCCATTGATGCGGTAAGTTTGGCTTGAGAAGGATAGAAGGCTCTTCAATGAATAGGAGAAGGATTTGACCTTGGGGCTCTTTATGTCAATAGGCGGGTTTTCTGATAACCTTAGGGCCTTTTCTTTGTGCTTTGTAAATTCCTACCGCCATTTTCTTCCTTTAAATAATCTACCCTATTCTCATTCAAGTTTCAATATGCAATTTATGCATTCAATCTTAGTATAAAGATTTGTGTTTGTTTCTTTTTGGTTATATTATTGTGAATGTTTTTTAACCAGCAATATTGTCTTTTGTTTTTATGCTAGAAGCGATTAGATGTTTAATTTTTGGAATCTTCCATGTCTAACTTTAGTCCTAGAGTGATATCTCTAGGCACCTGTTATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAA

mRNA sequence

ATGAAATATTTCCTTCCATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTTTTATATCTCCTCATATTTTGAGCATCTTATTTCAGGGGGTTTTAATTGTTGGTGAGAGGGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTGAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGCACCTGTTATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAA

Coding sequence (CDS)

ATGAAATATTTCCTTCCATCCTTGGATACCACATGTTCAGTTGCAGTGTTTTCTAAAACAATTTTTATATCTCCTCATATTTTGAGCATCTTATTTCAGGGGGTTTTAATTGTTGGTGAGAGGGGAACAGGAAAGACATCTCTTGCACTGGCCATAGCTGCAGAAGCAAAAGTACCAGTTGTTACAGTTGAAGCCCAAGAATTAGAGCCTGGACTATGGGTTGGGCAGAGTGCATCCAATGTCCGGGAATTATTCCAAACTGCAAGAGATTTGGCACCTGTTATCATATTTGTGGAGGATTTTGACCTCTTTGCTGGAGTTCGTGGCAAGTTTATTCATACCAAAGAACAGGATCACGAGGCTTTCATTAACCAACTTCTTGTGGAGCTTGATGGGTAA

Protein sequence

MKYFLPSLDTTCSVAVFSKTIFISPHILSILFQGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG

Homology

[Close]

BLAST of IVF0004425 vs. ExPASy Swiss-Prot
Match: F4J3N2 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI5 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.6e-46
Identity = 92/100 (92.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEA+VPVV VEAQELE GLWVGQSA+NVRELFQTARDLA
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLA 877

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           PVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Sbjct: 878 PVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917

[Close]

BLAST of IVF0004425 vs. ExPASy Swiss-Prot
Match: B3DV46 (ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum infernorum (isolate V4) OX=481448 GN=ftsH1 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.8e-17
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL+VG  GTGKT LA A+A EAKVP  ++   E    ++VG  A+ VR+LF  A+  A
Sbjct: 214 KGVLLVGPPGTGKTLLAKAVAGEAKVPFFSISGSEFVE-MFVGVGAARVRDLFGQAKSKA 273

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           P I+F+++ D     RG  I     +HE  +NQLLVE+DG
Sbjct: 274 PCIVFIDELDAIGRQRGVRIQVGSDEHEQTLNQLLVEMDG 312

[Close]

BLAST of IVF0004425 vs. ExPASy Swiss-Prot
Match: A9NE17 (ATP-dependent zinc metalloprotease FtsH OS=Acholeplasma laidlawii (strain PG-8A) OX=441768 GN=ftsH PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL+VG+ GTGKT LA A+A EA+VP  ++   +    L+VG  AS VR+LF+ A+  A
Sbjct: 216 KGVLLVGQPGTGKTLLAKAVAGEAQVPFFSISGSDFVE-LYVGVGASRVRDLFKVAKQSA 275

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           P IIF+++ D     RG  +     + E  +NQLLVE+DG
Sbjct: 276 PCIIFIDEIDAVGRQRGAGMGGGNDEREQTLNQLLVEMDG 314

[Close]

BLAST of IVF0004425 vs. ExPASy Swiss-Prot
Match: A1TZE0 (ATP-dependent zinc metalloprotease FtsH OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=ftsH PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-16
Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 29  SILFQGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTA 88
           +++ +GVL+VG  GTGKT LA AIA EA+VP  ++ A E    ++VG  A+ VR++FQTA
Sbjct: 216 AVMPKGVLLVGPPGTGKTLLARAIAGEAEVPFFSISASEFIE-MFVGVGAARVRDMFQTA 275

Query: 89  RDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           R  AP +IF+++ D     RG  +     + E  +NQ+L E+DG
Sbjct: 276 RKEAPALIFIDELDAVGRSRGAGLGGGHDEREQTLNQILTEMDG 318

[Close]

BLAST of IVF0004425 vs. ExPASy Swiss-Prot
Match: Q9SD67 (ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH7 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.4e-16
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL+VG  GTGKT LA A+A EA+VP ++  A E    L+VG  AS VR+LF  A+  A
Sbjct: 359 RGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVE-LYVGMGASRVRDLFARAKKEA 418

Query: 93  PVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 133
           P IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 419 PSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDG 458

[Close]

BLAST of IVF0004425 vs. ExPASy TrEMBL
Match: A0A0A0LY88 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G674040 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58
Identity = 122/132 (92.42%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MKYFLPSLDTTCSVAVFSKTIFISPHILSILFQGVLIVGERGTGKTSLALAIAAEAKVPV 60
           +K+   SLDTTCSVAVFSKTI ISPH LSIL QGVLIVGE GTGKTSLALAIAAEAKVPV
Sbjct: 11  LKHLFLSLDTTCSVAVFSKTILISPHGLSILLQGVLIVGESGTGKTSLALAIAAEAKVPV 70

Query: 61  VTVEAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHE 120
           VTV+AQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHE
Sbjct: 71  VTVKAQELEPGLWVGQSASNVRELFQTARDLAPVIIFVEDFDLFAGVRGKFIHTKEQDHE 130

Query: 121 AFINQLLVELDG 133
           AFINQLLVELDG
Sbjct: 131 AFINQLLVELDG 142

[Close]

BLAST of IVF0004425 vs. ExPASy TrEMBL
Match: A0A5D3DES8 (Putative inactive ATP-dependent zinc metalloprotease FTSHI 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold543G00030 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 486 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 545

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 546 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 585

[Close]

BLAST of IVF0004425 vs. ExPASy TrEMBL
Match: A0A6J1DWH2 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025134 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 825 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 884

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 885 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 924

[Close]

BLAST of IVF0004425 vs. ExPASy TrEMBL
Match: A0A1S3B9K0 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487285 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 820 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 879

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 880 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 919

[Close]

BLAST of IVF0004425 vs. ExPASy TrEMBL
Match: A0A6J1JID9 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485376 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-45
Identity = 95/100 (95.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLA+AIAAEAKVPVVTV+AQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 821 RGVLIVGERGTGKTSLAMAIAAEAKVPVVTVQAQELEPGLWVGQSASNVRELFQTARDLA 880

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           PVIIFVEDFD+FAGVRGK+IHTKEQDHEAFINQLLVELDG
Sbjct: 881 PVIIFVEDFDIFAGVRGKYIHTKEQDHEAFINQLLVELDG 920

[Close]

BLAST of IVF0004425 vs. NCBI nr
Match: XP_006368058.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic, partial [Solanum tuberosum])

HSP 1 Score: 184 bits (466), Expect = 1.38e-56
Identity = 92/100 (92.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKT+LALAIAAEAKVP+V V+AQ+LE GLWVGQSASNVRELFQTARDLA
Sbjct: 74  RGVLIVGERGTGKTTLALAIAAEAKVPLVEVKAQQLEAGLWVGQSASNVRELFQTARDLA 133

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 132
           PVIIFVEDFDLFAGVRGKFIHTK+QDHEAFINQLLVELDG
Sbjct: 134 PVIIFVEDFDLFAGVRGKFIHTKKQDHEAFINQLLVELDG 173

[Close]

BLAST of IVF0004425 vs. NCBI nr
Match: TYK21958.1 (putative inactive ATP-dependent zinc metalloprotease FTSHI 5 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (497), Expect = 4.76e-55
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 486 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 545

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 132
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 546 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 585

[Close]

BLAST of IVF0004425 vs. NCBI nr
Match: XP_038878867.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 196 bits (497), Expect = 5.89e-55
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 816 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 875

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 132
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 876 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 915

[Close]

BLAST of IVF0004425 vs. NCBI nr
Match: XP_008443775.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Cucumis melo])

HSP 1 Score: 196 bits (497), Expect = 5.90e-55
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 820 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 879

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 132
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 880 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 919

[Close]

BLAST of IVF0004425 vs. NCBI nr
Match: XP_022158670.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Momordica charantia])

HSP 1 Score: 196 bits (497), Expect = 5.90e-55
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA
Sbjct: 825 RGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 884

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 132
           PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG
Sbjct: 885 PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 924

[Close]

BLAST of IVF0004425 vs. TAIR 10
Match: AT3G04340.1 (FtsH extracellular protease family )

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-47
Identity = 92/100 (92.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVLIVGERGTGKTSLALAIAAEA+VPVV VEAQELE GLWVGQSA+NVRELFQTARDLA
Sbjct: 818 RGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQELEAGLWVGQSAANVRELFQTARDLA 877

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           PVIIFVEDFDLFAGVRGKF+HTK+QDHE+FINQLLVELDG
Sbjct: 878 PVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDG 917

[Close]

BLAST of IVF0004425 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 )

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL+VG  GTGKT LA A+A EA+VP ++  A E    L+VG  AS VR+LF  A+  A
Sbjct: 359 RGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVE-LYVGMGASRVRDLFARAKKEA 418

Query: 93  PVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 133
           P IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 419 PSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDG 458

[Close]

BLAST of IVF0004425 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 )

HSP 1 Score: 84.0 bits (206), Expect = 1.0e-16
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL+VG  GTGKT LA A+A E+ VP ++  A E    L+VG  AS VR+LF  A+  A
Sbjct: 363 RGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVE-LYVGMGASRVRDLFARAKKEA 422

Query: 93  PVIIFVEDFDLFAGVR-GKFIHTKEQDHEAFINQLLVELDG 133
           P IIF+++ D  A  R GKF      + E  +NQLL E+DG
Sbjct: 423 PSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDG 462

[Close]

BLAST of IVF0004425 vs. TAIR 10
Match: AT1G06430.1 (FTSH protease 8 )

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL+VG  GTGKT LA AIA EA VP  ++   E    ++VG  AS VR+LF+ A++ A
Sbjct: 254 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE-MFVGVGASRVRDLFKKAKENA 313

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           P I+FV++ D     RG  I     + E  +NQLL E+DG
Sbjct: 314 PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG 352

[Close]

BLAST of IVF0004425 vs. TAIR 10
Match: AT2G30950.1 (FtsH extracellular protease family )

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 33  QGVLIVGERGTGKTSLALAIAAEAKVPVVTVEAQELEPGLWVGQSASNVRELFQTARDLA 92
           +GVL++G  GTGKT LA AIA EA VP  ++   E    ++VG  AS VR+LF+ A++ A
Sbjct: 261 KGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE-MFVGVGASRVRDLFKKAKENA 320

Query: 93  PVIIFVEDFDLFAGVRGKFIHTKEQDHEAFINQLLVELDG 133
           P I+FV++ D     RG  I     + E  +NQLL E+DG
Sbjct: 321 PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG 359

The following BLAST results are available for this feature:

BLAST of IVF0004425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3N2	4.6e-46	92.00	Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=A...	[more]
B3DV46	5.8e-17	46.00	ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum infernorum (isola...	[more]
A9NE17	4.9e-16	45.00	ATP-dependent zinc metalloprotease FtsH OS=Acholeplasma laidlawii (strain PG-8A)...	[more]
A1TZE0	4.9e-16	43.27	ATP-dependent zinc metalloprotease FtsH OS=Marinobacter hydrocarbonoclasticus (s...	[more]
Q9SD67	6.4e-16	48.51	ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana...	[more]

BLAST of IVF0004425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY88	1.4e-58	92.42	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G674040 PE=4 SV...	[more]
A0A5D3DES8	1.6e-46	99.00	Putative inactive ATP-dependent zinc metalloprotease FTSHI 5 OS=Cucumis melo var...	[more]
A0A6J1DWH2	1.6e-46	99.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=M...	[more]
A0A1S3B9K0	1.6e-46	99.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=C...	[more]
A0A6J1JID9	2.3e-45	95.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic isof...	[more]

BLAST of IVF0004425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_006368058.1	1.38e-56	92.00	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chlorop...	[more]
TYK21958.1	4.76e-55	99.00	putative inactive ATP-dependent zinc metalloprotease FTSHI 5 [Cucumis melo var. ...	[more]
XP_038878867.1	5.89e-55	99.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Ben...	[more]
XP_008443775.1	5.90e-55	99.00	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chlorop...	[more]
XP_022158670.1	5.90e-55	99.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic [Mom...	[more]

BLAST of IVF0004425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04340.1	3.2e-47	92.00	FtsH extracellular protease family	[more]
AT3G47060.1	4.6e-17	48.51	FTSH protease 7	[more]
AT5G58870.1	1.0e-16	47.52	FTSH protease 9	[more]
AT1G06430.1	1.7e-16	46.00	FTSH protease 8	[more]
AT2G30950.1	2.3e-16	45.00	FtsH extracellular protease family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 31..132 e-value: 8.7E-5 score: 31.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 10..132 e-value: 4.2E-26 score: 93.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 32..132
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 35..132 e-value: 9.0E-21 score: 74.7
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 34..132
None	No IPR available	PANTHER	PTHR23076:SF58	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 5, CHLOROPLASTIC-RELATED	coord: 34..132
None	No IPR available	CDD	cd00009	AAA	coord: 34..102 e-value: 2.59556E-7 score: 44.8295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004425.2	IVF0004425.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0042981	regulation of apoptotic process
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004222	metalloendopeptidase activity