IVF0004299 (gene) Melon (IVF77) v1

Overview
NameIVF0004299
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein SA
Locationchr07: 20841010 .. 20843535 (-)
RNA-Seq ExpressionIVF0004299
SyntenyIVF0004299
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGAGGCTTTCTTCATCAGAAGAACCCTTTTATTCCGTCCGCCAAATCCAACTCATACTACTAGATTTCCGCGGCGGCGGCGGAGGCGGTTTGCGCTCTCTTGAACATATCTTCGGTTAGTTTTTCTCTCTTGACCCATGTTTTTTTTTTTTCTTTATTTTATTTTTTAGATTTTTGTTCGTCTCTATTAAGATAGCTCCATGTAAGTATATAGATACTGTGTCAACCCTGATGTAAACTATGATTGACAGAGATTCGGCAATGGCGACTGGAGCAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGAACTAAGAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGTATTTTGGGAATACATTTCAGATTTATAGATCTTTGCTGTTGTTTAAATCCGTCAAGTGCTTGCTAGATACTGATTATTAGAAGGCATTTCCACTTCTTTTCTCTTTGTTTTCAGTGTTTTATAGATATTTAGCTTGAACTGGAACTCTTAAGTCCTTTAATGGGTGTGCTTTATCTATATTTCAAATCAGAATTTGATCATAATTTCGTTAATCCTCATGAATGGATATGTTTTATCTTGATGAAGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTCGCTATCGAGAATCCTCGAGACATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGTCTTCTGATATTGACTGATCCTCGAACTGATCATCAGGTGCTTTAACATCTTTAAGAATCAATTCTAGTTTGGGATTGTAAGTTTGCGTTCAAGACTCAAGAGGATGGTTTTCTCTTACCAAATTTAGATTTACTCATGTTTATTCCCGTAAGCATAATCCATAATGTATGCTTTACTTTTGTTGTTGTTGCTGCTATTTATGTTGCCTGGTTGGTTTATTTGCGTGTTGCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCAAGGATGGTTTTGCAGATGCGTGGAACGGTTCGCCCTGGGTACAAATGGGACGTGATGGTAACTTCTTTATCTGTCTGAACTTGAGAAATTGCATTATATGACATGATACTTGAAATTGACACTTGATTGTTGGATGTTAAATCGAAGGCTTGGAATGAATGGTAATGGTATGCACATGTGTTTGTTGCACAGGTCGATTTGTTTTTCTACCGAGAGCCCGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGATGCTTCTAATGTAGCTCCTACTGCTGCCGCTGCTTCAGTTTCTAATGTTGAGTGGGCACAAGAGCCAGGTTGGATACGAGCCTTTTCTTTCTTGCTTGTTTTAGTAATTTAATCCTTTGCCATTGCCATTGCTATTGGTGTGTTTACACTCCAACTATTTTCTTAGGCCGTCATTTTTTCCTAAAAATAATTATGAAAGTTCCCAAGTCCCAAGGCTTTAGGACTTAGGCTTTTAGAGCTTAACAAAAGGCGAGTGCTAATAAATGCGCCTCCTTCTTAGAGGCAAGGTGCCAGCGTCGAGCTTTTTAAACACTGGTTTTAGGACGAGTGTATAAAAGGGTTTTATCGTGGATATTTATTATTTGTCCCTTTTGCTTTTGCAGTCGGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGTTGCACCTCCTTCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCACAATTTTGATTCATCGTTATGAGTTTCGCTTGTTCATGTAGCAGTCCCACCTAATTAGTTGGGCATAAGTAGGCTTTAGCACTCACAGTCGTAAACCAAAAATGTACTACCACCTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTGAAGACTGATTTCTGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTTGTTTTCCTTCAACGTGGGTATTTTGGTTTGGTACACTTTTTTATGAGAAACAAAAAGTTGCTCCAACCATTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTACCAATATTGTTTTTGTAGTGGAGAAACTGTTGCCCTTATTTCACCTCAGTTATCGACCATTTGTTCTATTAGCTGGAATTATGTTCCTTGGAGAATGTTATATGAGATAATTGTCTTGTTGTTGGTCC

mRNA sequence

CACGAGGCTTTCTTCATCAGAAGAACCCTTTTATTCCGTCCGCCAAATCCAACTCATACTACTAGATTTCCGCGGCGGCGGCGGAGGCGGTTTGCGCTCTCTTGAACATATCTTCGAGATTCGGCAATGGCGACTGGAGCAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGAACTAAGAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTCGCTATCGAGAATCCTCGAGACATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGTCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCAAGGATGGTTTTGCAGATGCGTGGAACGGTTCGCCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCCGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGATGCTTCTAATGTAGCTCCTACTGCTGCCGCTGCTTCAGTTTCTAATGTTGAGTGGGCACAAGAGCCAGTCGGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGTTGCACCTCCTTCCTCCGATTGGTAACAAGGGAAGCTTTCCCTCTTACCCACAATTTTGATTCATCGTTATGAGTTTCGCTTGTTCATGTAGCAGTCCCACCTAATTAGTTGGGCATAAGTAGGCTTTAGCACTCACAGTCGTAAACCAAAAATGTACTACCACCTTTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTGAAGACTGATTTCTGTTTTCTTTCTTCTAGTCCAGTTTTAGGTTTTAAGATTGGACGTTTGTTTTCCTTCAACGTGGGTATTTTGGTTTGGTACACTTTTTTATGAGAAACAAAAAGTTGCTCCAACCATTACCAAGACGAAATACTTTGTTCTACTGATGGAATTATGTACCAATATTGTTTTTGTAGTGGAGAAACTGTTGCCCTTATTTCACCTCAGTTATCGACCATTTGTTCTATTAGCTGGAATTATGTTCCTTGGAGAATGTTATATGAGATAATTGTCTTGTTGTTGGTCC

Coding sequence (CDS)

ATGGCGACTGGAGCAGAACAGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTTCATCTAGGAACTAAGAACTGCGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACTTGGGTAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTCGCTATCGAGAATCCTCGAGACATTATTGTTCAATCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGGAGGCATACCCCTGGAACATTCACCAACCAGCTTCAAACCTCATTCAATGAGCCACGTCTTCTGATATTGACTGATCCTCGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCGCCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCAAGGATGGTTTTGCAGATGCGTGGAACGGTTCGCCCTGGGTACAAATGGGACGTGATGGTCGATTTGTTTTTCTACCGAGAGCCCGAGGAGGTGAAGGAGAAAGAGGAAGAAGAAGCTGTTGCACCACCAGATTACGGCATTGCAGATTTTGGTTCTGCTCCATTGGCTGTAGATCAATGGGTTCCTGATGCTCAGTGGGATGCTTCTAATGTAGCTCCTACTGCTGCCGCTGCTTCAGTTTCTAATGTTGAGTGGGCACAAGAGCCAGTCGGAGCAGCAGACGGATGGGGTGTTGCCATACCACCACCGGCACCTTCACTTGAAGCTGTTGCACCTCCTTCCTCCGATTGGTAA

Protein sequence

MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Homology
[Close]
BLAST of IVF0004299 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.6e-126
Identity = 232/297 (78.11%), Postives = 247/297 (83.16%), Query Frame = 0 

Query: 2   ATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A  A  RQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  MAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           +AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVD-Q 241
           RMVLQMRGT+RPG KWDVMVDLFFYREPEE K++EEEEA A  DY I DF +  +A D Q
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 W--VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPS 296
           W    D  W  +   P  A   V+    A+ P  A   WG A+PPP    +   PPS
Sbjct: 247 WPGTIDQSWSDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPPQ---QIPVPPS 299

[Close]
BLAST of IVF0004299 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 8.0e-123
Identity = 225/298 (75.50%), Postives = 245/298 (82.21%), Query Frame = 0 

Query: 3   TGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQM 62
           T A  RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +
Sbjct: 4   TTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNL 63

Query: 63  AARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPR 122
           AAR+IVAIEN +DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EPR
Sbjct: 64  AARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPR 123

Query: 123 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLAR 182
           LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLAR
Sbjct: 124 LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLAR 183

Query: 183 MVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQWV 242
           MVLQMRGT+RPG KWDVMVDLFFYREPEE K+ EE+E VA PDY IADF  + +  D   
Sbjct: 184 MVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSDGQW 243

Query: 243 PDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPP--APSLEAVAPPSSDW 299
           P A     N A      +V  V WA  P   A  WG A+PPP   P+    + P++ W
Sbjct: 244 PAAIDQPWNDAVPQPIPAVPAVNWA-APEAVAGDWGEAVPPPQQIPTAGIESVPATGW 299

[Close]
BLAST of IVF0004299 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 5.2e-122
Identity = 231/304 (75.99%), Postives = 246/304 (80.92%), Query Frame = 0 

Query: 8   RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI 67
           R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVI
Sbjct: 6   RALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 65

Query: 68  VAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILT 127
           VAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EPRLLILT
Sbjct: 66  VAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILT 125

Query: 128 DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 187
           DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM
Sbjct: 126 DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 185

Query: 188 RGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP---LAVDQW--- 247
           R T+ PG+KWDVMVDLFFYREPEE KE+E +E VA PDYGI D+ +     L    W   
Sbjct: 186 RRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGDWGAP 245

Query: 248 VPDA-QW--DASNVAPTAAAASVSNVEWAQEPVG---AADGWGVAIPPPA----PSLEAV 296
           + DA QW  D   VAP  A    +  + A  P     A DGW  A  PP     P +E V
Sbjct: 246 ITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAPPVAVPPPVVEGV 305

[Close]
BLAST of IVF0004299 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 8.8e-122
Identity = 224/298 (75.17%), Postives = 245/298 (82.21%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MA+GA  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MASGA--RELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
            +AARVIV+IENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+E
Sbjct: 61  MLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPL-AVD 240
           ARMVLQMRG +  G+KW+VMVDLFFYREPEE K++EEE+ +   DY +AD+ +AP+   D
Sbjct: 181 ARMVLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGAD 240

Query: 241 QW--VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPS 296
           QW  +PDAQW    V P  +A       W      A DGW  A  PP P    +  P+
Sbjct: 241 QWNAIPDAQWGGDVVQPANSAVPAGT--WTDAGPIAGDGWDAAAAPPVPGAVGLDVPA 292

[Close]
BLAST of IVF0004299 vs. ExPASy Swiss-Prot
Match: Q9ZSR8 (40S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.6e-118
Identity = 210/281 (74.73%), Postives = 233/281 (82.92%), Query Frame = 0 

Query: 9   QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIV 68
           QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIV
Sbjct: 8   QLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIV 67

Query: 69  AIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTD 128
           AIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF+EPRLLILTD
Sbjct: 68  AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTD 127

Query: 129 PRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 188
           PRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR
Sbjct: 128 PRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMR 187

Query: 189 GTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGI--ADFGSAPLAVDQW----V 248
           GT+RP  KWDVMVDLFFYREPEE K ++E+E     ++G+   ++G      DQW    +
Sbjct: 188 GTIRPAQKWDVMVDLFFYREPEETKPEDEDEVAPQAEFGLPAPEYGGG----DQWTTAAI 247

Query: 249 PDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPP 284
           PDA W     AP +AA +  +   +  P  A  GW  A+PP
Sbjct: 248 PDAAWPGEAQAPISAAPAAGSWNDSAAPAAAEGGWDAAVPP 284

[Close]
BLAST of IVF0004299 vs. ExPASy TrEMBL
Match: A0A5A7TNP4 (40S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005420 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.8e-170
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 299
           WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]
BLAST of IVF0004299 vs. ExPASy TrEMBL
Match: A0A1S3BXR8 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.8e-170
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 299
           WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]
BLAST of IVF0004299 vs. ExPASy TrEMBL
Match: A0A0A0KUD9 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_4G038770 PE=3 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 9.7e-164
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 299
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]
BLAST of IVF0004299 vs. ExPASy TrEMBL
Match: A0A6J1C6Q9 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 8.5e-152
Identity = 271/301 (90.03%), Postives = 281/301 (93.36%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPV--GAADGWGVAIP-PPAPSLEAVAPPSSD 299
           W PDAQW AS+V P AAAA  SNVEWAQEPV  GAADGW  A+  PPAP +EA APP+SD
Sbjct: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD 300

[Close]
BLAST of IVF0004299 vs. ExPASy TrEMBL
Match: A0A6J1FSL7 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.1e-150
Identity = 269/301 (89.37%), Postives = 281/301 (93.36%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS 297
           WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

[Close]
BLAST of IVF0004299 vs. NCBI nr
Match: XP_008453731.1 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0044754.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa] >TYK16708.1 40S ribosomal protein SA-like [Cucumis melo var. makuwa])

HSP 1 Score: 602 bits (1552), Expect = 3.20e-217
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298
           WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW
Sbjct: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298

[Close]
BLAST of IVF0004299 vs. NCBI nr
Match: XP_011653139.1 (40S ribosomal protein SA [Cucumis sativus] >XP_031739535.1 40S ribosomal protein SA [Cucumis sativus] >KGN53260.1 hypothetical protein Csa_015332 [Cucumis sativus])

HSP 1 Score: 580 bits (1494), Expect = 2.23e-208
Identity = 287/298 (96.31%), Postives = 290/298 (97.32%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQ QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQCQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAP+AVDQ
Sbjct: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPAPSLEAVAPPSSDW 298
           WVPDAQW A NVAPTAAAASVSN EWAQE V AADGWGVAIPPPAPSLEA APP+SDW
Sbjct: 241 WVPDAQWGAPNVAPTAAAASVSNAEWAQESVRAADGWGVAIPPPAPSLEAAAPPASDW 298

[Close]
BLAST of IVF0004299 vs. NCBI nr
Match: XP_022136902.1 (40S ribosomal protein SA-like [Momordica charantia] >XP_022136903.1 40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 540 bits (1391), Expect = 1.20e-192
Identity = 271/301 (90.03%), Postives = 281/301 (93.36%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG  QRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTW+KL
Sbjct: 1   MATGTAQRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWDKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGT+R G+KWDVMVDLFFYREPEE KE EEEEAVAPPDYGIADFG+APLAVDQ
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-EEEEAVAPPDYGIADFGAAPLAVDQ 240

Query: 241 WVPDAQWDASNVAPTAAAASVSNVEWAQEPV--GAADGWGVAIP-PPAPSLEAVAPPSSD 298
           W PDAQW AS+V P AAAA  SNVEWAQEPV  GAADGW  A+  PPAP +EA APP+SD
Sbjct: 241 WAPDAQWGASDVVPAAAAAPASNVEWAQEPVALGAADGWDAAVARPPAPPVEAGAPPASD 300

[Close]
BLAST of IVF0004299 vs. NCBI nr
Match: XP_022942879.1 (40S ribosomal protein SA-like [Cucurbita moschata])

HSP 1 Score: 535 bits (1379), Expect = 8.69e-191
Identity = 269/301 (89.37%), Postives = 281/301 (93.36%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVPDAQWDASNVAPTAAAAS--VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAPPS 296
           WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW VA  PPAP LEA APP+
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAPPA 300

[Close]
BLAST of IVF0004299 vs. NCBI nr
Match: KAG6600605.1 (40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 535 bits (1377), Expect = 1.89e-190
Identity = 269/303 (88.78%), Postives = 281/303 (92.74%), Query Frame = 0 

Query: 1   MATGAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQ 240
           ARMVLQMRGTVRPG+KWDVMVDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+
Sbjct: 181 ARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADR 240

Query: 241 WVPDAQWDASNVAPTAAAAS----VSNVEWAQEPV---GAADGWGVAIPPPAPSLEAVAP 296
           WV DAQWDA ++ P AAAA+    VSNVEWA EPV   GAADGW VA  PPAP LEA AP
Sbjct: 241 WVADAQWDAPDMVPAAAAAAAAAPVSNVEWALEPVALGGAADGWDVAEAPPAPLLEAGAP 300

[Close]
BLAST of IVF0004299 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-118
Identity = 216/293 (73.72%), Postives = 239/293 (81.57%), Query Frame = 0 

Query: 1   MAT--GAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT   A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAP 240
           LLARMVLQMRGT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM-- 240

Query: 241 LAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAAD-GWGVAIPP 284
           +  DQW    +PDA W     AP +AA + ++  W+      AD GW  A PP
Sbjct: 241 VGGDQWTTAQIPDAAWPGEGQAPISAAPAAAS--WSDSAAAPADGGWEAAAPP 289

[Close]
BLAST of IVF0004299 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 421.0 bits (1081), Expect = 7.9e-118
Identity = 215/292 (73.63%), Postives = 238/292 (81.51%), Query Frame = 0 

Query: 1   MAT--GAEQRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT   A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQMAARVIVAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYG---IADFGSAP 240
           LLARMVLQMRGT+  G KWDVMVDLFFYREPEE K ++E+EA    +YG     ++G   
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGM-- 240

Query: 241 LAVDQW----VPDAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPP 284
           +  DQW    +PDA W     AP +AA + ++  W+    G   GW  A PP
Sbjct: 241 VGGDQWTTAQIPDAAWPGEGQAPISAAPAAAS--WSDSADG---GWEAAAPP 285

[Close]
BLAST of IVF0004299 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 408.7 bits (1049), Expect = 4.1e-114
Identity = 207/282 (73.40%), Postives = 229/282 (81.21%), Query Frame = 0 

Query: 8   RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI 67
           RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVI
Sbjct: 11  RQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVI 70

Query: 68  VAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILT 127
           VAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLLILT
Sbjct: 71  VAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILT 130

Query: 128 DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 187
           DPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQM
Sbjct: 131 DPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQM 190

Query: 188 RGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPLAVDQW----VP 247
           RGT+    KWDVMVDLFFYREPEE K++ +EEA    DYG+       +  DQW    + 
Sbjct: 191 RGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYGM-------VGGDQWTTAQIS 250

Query: 248 DAQWDASNVAPTAAAASVSNVEWAQEPVGAADGWGVAIPPPA 286
           DA W      P +AA +V         V  A GW  A  P A
Sbjct: 251 DAAWSGEVEQPISAAPAVG--------VTVAAGWEAASVPAA 277

[Close]
BLAST of IVF0004299 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-101
Identity = 173/195 (88.72%), Postives = 188/195 (96.41%), Query Frame = 0 

Query: 8   RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI 67
           RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVI
Sbjct: 11  RQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVI 70

Query: 68  VAIENPRDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILT 127
           VAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRLLILT
Sbjct: 71  VAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILT 130

Query: 128 DPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQM 187
           DPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQM
Sbjct: 131 DPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQM 190

Query: 188 RGTVRPGYKWDVMVD 203
           RGT+    KWDVMV+
Sbjct: 191 RGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:
BLAST of IVF0004299 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O225181.6e-12678.1140S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1[more]
O657518.0e-12375.5040S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1[more]
A5BUU45.2e-12275.9940S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV... [more]
O803778.8e-12275.1740S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1[more]
Q9ZSR81.6e-11874.7340S ribosomal protein SA OS=Brassica napus OX=3708 GN=LRP PE=2 SV=1[more]
BLAST of IVF0004299 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TNP41.8e-170100.0040S ribosomal protein SA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3BXR81.8e-170100.0040S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103494374 PE=3 SV=1[more]
A0A0A0KUD99.7e-16496.3140S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_4G038770 PE=3 SV=1[more]
A0A6J1C6Q98.5e-15290.0340S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111008481 PE=3 SV=... [more]
A0A6J1FSL72.1e-15089.3740S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111447777 PE=3 SV=1[more]
BLAST of IVF0004299 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453731.13.20e-217100.00PREDICTED: 40S ribosomal protein SA-like [Cucumis melo] >KAA0044754.1 40S riboso... [more]
XP_011653139.12.23e-20896.3140S ribosomal protein SA [Cucumis sativus] >XP_031739535.1 40S ribosomal protein... [more]
XP_022136902.11.20e-19290.0340S ribosomal protein SA-like [Momordica charantia] >XP_022136903.1 40S ribosoma... [more]
XP_022942879.18.69e-19189.3740S ribosomal protein SA-like [Cucurbita moschata][more]
KAG6600605.11.89e-19088.7840S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of IVF0004299 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G72370.11.6e-11873.7240s ribosomal protein SA [more]
AT1G72370.27.9e-11873.6340s ribosomal protein SA [more]
AT3G04770.24.1e-11473.4040s ribosomal protein SA B [more]
AT3G04770.12.3e-10188.7240s ribosomal protein SA B [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 47..56
score: 64.92
coord: 96..113
score: 47.01
coord: 121..138
score: 44.62
coord: 159..173
score: 53.64
coord: 17..35
score: 36.11
coord: 138..149
score: 51.15
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 119..184
e-value: 4.8E-12
score: 45.6
coord: 20..113
e-value: 3.1E-13
score: 49.5
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 20..186
e-value: 4.85161E-73
score: 221.302
NoneNo IPR availableGENE3D3.40.50.10490coord: 16..222
e-value: 1.4E-103
score: 346.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..298
NoneNo IPR availablePANTHERPTHR11489:SF2540S RIBOSOMAL PROTEIN SAcoord: 1..285
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 12..208
e-value: 7.5E-96
score: 317.2
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 1..285
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 17..28
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 121..145
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 2..269
score: 50.567749
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004299.1IVF0004299.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome