IVF0004254 (gene) Melon (IVF77) v1

Overview


Name	IVF0004254
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	chr05: 25505902 .. 25507313 (-)
RNA-Seq Expression	IVF0004254
Synteny	IVF0004254

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCCTTTCACTCACAAATTTCCCTCTTCAATAATGCTTCTAAGAAGTCCATCAACTCTAATTCTCAATCCATGGAAACCCCATTTCAAAGAATCCTCCGCGGAGACTGTGATCCTCCACCAATTTCCTAAATCACGGCTCCTCACACTCTCTGCTTCTTCGAAATTGTTGCCGGTGCCACACATGATTGGTCCGGGCATTAAGATGAAGATGATGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCTGATTGCGGTGCTGAAATGGTCGGTGGTTTTGTTGATGGTAAATTCAATTGCAATGGCAATGGCAATGACAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTACATTATATGAGAATTGAAATTACTATCTTCTTTAATTTGATTCAAACTTTTTAACTTTGACATTTGGTTCTGATCATTCATTTTATTCTTCTCTGTTAAATGGAGAATGGAAATCTTGTTGTCTCAAATAGAAGTTCTTGCAAAATCTTAGTTCTGATCCTTTACCACTGTCCATTCCTTTTCTAGGTGTTTGTATGGATCTTGATCTTGAGTGCCTGAACTGAATCTTTTCACAAATTGGGACTAAACCATTACAAAATTGGTTTTTCTATGAAGTTGCTACAAGAATGTAAAATGTCTTAAGGGGGAAAAGTTTGAACTATTGTTTTACTATTGAAAAAACTTGTGTGGTTAGTCGTAGAGTTTCATTCTCAAGCAATAATTTGTTGTTTTTATCTGCTGCTAATAAACAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGGTACGGAGAATGAGATATCCTGCTTTTTCATTAACTATATAAATCCAACACATAGCTTAATAATGTGAATAAAGAACACCAATTATCGAGCTTTTGTAGGAATCTGAAATTTTGATATACAAGGGAAAGAAAGAGAGCTCTTTCTCTCCCACACACATGCTAGCTAATTTTTGCTATAATTGGGACATTGGTAATTGATTTGTGGGGTTGTTTTGTTTGTTTAACTGGTGCAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

mRNA sequence

TCTTCCTTTCACTCACAAATTTCCCTCTTCAATAATGCTTCTAAGAAGTCCATCAACTCTAATTCTCAATCCATGGAAACCCCATTTCAAAGAATCCTCCGCGGAGACTGTGATCCTCCACCAATTTCCTAAATCACGGCTCCTCACACTCTCTGCTTCTTCGAAATTGTTGCCGGTGCCACACATGATTGGTCCGGGCATTAAGATGAAGATGATGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCTGATTGCGGTGCTGAAATGGTCGGTGGTTTTGTTGATGGTAAATTCAATTGCAATGGCAATGGCAATGACAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

Coding sequence (CDS)

ATGCTTCTAAGAAGTCCATCAACTCTAATTCTCAATCCATGGAAACCCCATTTCAAAGAATCCTCCGCGGAGACTGTGATCCTCCACCAATTTCCTAAATCACGGCTCCTCACACTCTCTGCTTCTTCGAAATTGTTGCCGGTGCCACACATGATTGGTCCGGGCATTAAGATGAAGATGATGGGATTGTGCTGTGGTGTGGATGACGTAGGGGAGAGTTCTGATTGCGGTGCTGAAATGGTCGGTGGTTTTGTTGATGGTAAATTCAATTGCAATGGCAATGGCAATGACAATGGTGGTGATGGTGGTTGTTTTGGTTCTTGGGATGGGGATCATACTGAAGAGGACATGGCAGAAATGCATTTTCAGAGAATGATAAAGACGAACCCGAAGGATTCGTTGTTACTAAGCAATTATGCTCAGTTCTTGAAGGAGGTTCGTGGAGATCTTATAAAAGCTGAAGAGTATTGTGGAAGAGCAATGTTAGCACGAGGCAATAATGGAAGTGTGATATCAATGTATGCCGAATTGATATGGAGTAATCATATGGATGCCTCCCGAGCTGAAAGTTACCATCTTCAAGCTACTAAAACTTCCCCTGATAATAGTTTTGTTTTTGCTGCTTATGCACGGTTTCTTTGGGAAGTTGACAAAGAAGTACTCGACGGAGAAGCTCTAATGGACATCTTTGGTGGCAACCCATTCTCATCCCAGTCCTCCTCTAACTAA

Protein sequence

MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQSSSN

Homology

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BLAST of IVF0004254 vs. ExPASy TrEMBL
Match: A0A5D3BDH3 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00320 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 2.9e-134
Identity = 242/244 (99.18%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNG--NDNGGDGGCFGSWDGDHTEEDMA 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNG  NDNGGDGGCFGSWDGDHTEEDMA
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDNDNGGDGGCFGSWDGDHTEEDMA 120

Query: 121 EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI 180
           EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI
Sbjct: 121 EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI 180

Query: 181 WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQ 240
           WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQ
Sbjct: 181 WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQ 240

Query: 241 SSSN 243
           SSSN
Sbjct: 241 SSSN 244

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BLAST of IVF0004254 vs. ExPASy TrEMBL
Match: A0A5A7V554 (EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001810 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.3e-120
Identity = 218/224 (97.32%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESS ETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFN---CNGNGNDNGGDGGCFGSWDGDHTEEDM 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFN   CNGNGN NGGDGGCFGSWDGDHTEEDM
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM 120

Query: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180
           AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL
Sbjct: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180

Query: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVL 222
           IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE L
Sbjct: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKECL 224

[Close]

BLAST of IVF0004254 vs. ExPASy TrEMBL
Match: A0A0A0LL02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 205/255 (80.39%), Postives = 213/255 (83.53%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIG------- 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG       
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIGGQAIKTM 60

Query: 61  -----------PGIKMKMMGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNG-NGNDNGGD 120
                      P + +   GLCCGVDDVGESSDCG EMVGGFVDGK N +G NGNDN G+
Sbjct: 61  LSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDN-GN 120

Query: 121 GGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAM 180
           GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAM
Sbjct: 121 GGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAM 180

Query: 181 LARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVL 237
           LARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KEV 
Sbjct: 181 LARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEVD 240

[Close]

BLAST of IVF0004254 vs. ExPASy TrEMBL
Match: A0A6J1G2S9 (uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC111450271 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 5.6e-69
Identity = 153/265 (57.74%), Postives = 180/265 (67.92%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMI-GPGIKMK 60
           MLLRS ST ILNPWKPH KE+S E  I+HQ PKSR LTL ASSKLLP P MI GP I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDN 120
                                  GLCCGV +VGESSDCG +             G G+D 
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGD-------------GGGSD- 120

Query: 121 GGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCG 180
           GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAEEYCG
Sbjct: 121 GGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAEEYCG 180

Query: 181 RAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDK 239
           R++ A  N+G+VIS+YA+LIW NH DASRAESYHLQA KTSPD+SFV A+YARFLW+  +
Sbjct: 181 RSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLWDAGE 240

[Close]

BLAST of IVF0004254 vs. ExPASy TrEMBL
Match: A0A6J1KGA4 (uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493633 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.7e-68
Identity = 152/266 (57.14%), Postives = 180/266 (67.67%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMI-GPGIKMK 60
           MLLRS ST ILNPWKPH KESS E  I++Q  KSR LTL ASSKLLP P +I GP I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKESSMEAEIVNQISKSRSLTLCASSKLLPPPLIIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGND- 120
                                  GLCCG+  V  SSDCG  +VG  VDG    +G G D 
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLCCGIAKVRGSSDCGGGVVGVSVDGGIGRDGCGGDG 120

Query: 121 ---NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 180
              +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAE
Sbjct: 121 GGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAE 180

Query: 181 EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 239
           EYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA KTSPD+SFV A+YA+FLW
Sbjct: 181 EYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYAQFLW 240

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BLAST of IVF0004254 vs. NCBI nr
Match: TYJ97822.1 (putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 485 bits (1249), Expect = 7.05e-173
Identity = 242/244 (99.18%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDN--GGDGGCFGSWDGDHTEEDMA 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDN  GGDGGCFGSWDGDHTEEDMA
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDNDNGGDGGCFGSWDGDHTEEDMA 120

Query: 121 EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI 180
           EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI
Sbjct: 121 EMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELI 180

Query: 181 WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQ 240
           WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQ
Sbjct: 181 WSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEALMDIFGGNPFSSQ 240

Query: 241 SSSN 242
           SSSN
Sbjct: 241 SSSN 244

[Close]

BLAST of IVF0004254 vs. NCBI nr
Match: KAA0061616.1 (EIN3-binding F-box protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 439 bits (1128), Expect = 5.49e-153
Identity = 218/224 (97.32%), Postives = 218/224 (97.32%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLLRSPSTLILNPWKPHFKESS ETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM
Sbjct: 1   MLLRSPSTLILNPWKPHFKESSTETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60

Query: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFN---CNGNGNDNGGDGGCFGSWDGDHTEEDM 120
           MGLCCGVDDVGESSDCGAEMVGGFVDGKFN   CNGNGN NGGDGGCFGSWDGDHTEEDM
Sbjct: 61  MGLCCGVDDVGESSDCGAEMVGGFVDGKFNRDSCNGNGNGNGGDGGCFGSWDGDHTEEDM 120

Query: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180
           AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL
Sbjct: 121 AEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAEL 180

Query: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVL 221
           IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE L
Sbjct: 181 IWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKECL 224

[Close]

BLAST of IVF0004254 vs. NCBI nr
Match: XP_011648683.2 (uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical protein Csa_019377 [Cucumis sativus])

HSP 1 Score: 380 bits (975), Expect = 1.01e-130
Identity = 207/256 (80.86%), Postives = 214/256 (83.59%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIGPGIKMKM 60
           MLL+SPST ILN WKPHFKESS ETVILHQF KSRL TLSASSKLLP P MIG G  +K 
Sbjct: 1   MLLKSPSTPILNTWKPHFKESSPETVILHQFCKSRLPTLSASSKLLPAPCMIG-GQAIKT 60

Query: 61  M-------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNCNG-NGNDNGG 120
           M                   GLCCGVDDVGESSDCG EMVGGFVDGK N +G NGNDNG 
Sbjct: 61  MLSNISVVAKRIPRMAVLDEGLCCGVDDVGESSDCGGEMVGGFVDGKVNRDGCNGNDNG- 120

Query: 121 DGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRA 180
           +GGCF SWDGD TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRA
Sbjct: 121 NGGCFVSWDGD-TEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRA 180

Query: 181 MLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEV 236
           MLARGNNGSVISMYA+LIWSN+MDASRAESYHLQATKTSPDNSFVFAAYARFLWEV+KEV
Sbjct: 181 MLARGNNGSVISMYADLIWSNYMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVEKEV 240

[Close]

BLAST of IVF0004254 vs. NCBI nr
Match: KAG6599396.1 (hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030381.1 hypothetical protein SDJN02_08728 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (731), Expect = 1.71e-93
Identity = 160/268 (59.70%), Postives = 187/268 (69.78%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIG-PGIKMK 60
           MLLRS ST ILNPWKPH KE+S E  I+HQ PKSR LTL ASSKLLP P MIG P I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIVHQIPKSRSLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGND- 120
                                  GLCCGV +VGESSDCG  MVG  VDG   C+G G D 
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLDGGLCCGVAEVGESSDCGGGMVGVSVDGGIGCDGCGGDG 120

Query: 121 ---NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 180
              +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAE
Sbjct: 121 GGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAE 180

Query: 181 EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 238
           EYCGR++ A  N+G+VIS+YA+LIW NH DASRAESYHLQA KTSPD+SFV A+YARFLW
Sbjct: 181 EYCGRSISANPNDGNVISIYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLW 240

[Close]

BLAST of IVF0004254 vs. NCBI nr
Match: XP_023545630.1 (uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276 bits (707), Expect = 8.01e-90
Identity = 159/270 (58.89%), Postives = 184/270 (68.15%), Query Frame = 0


Query: 1   MLLRSPSTLILNPWKPHFKESSAETVILHQFPKSRLLTLSASSKLLPVPHMIG-PGIKMK 60
           MLLRS ST ILNPWKPH KE+S E  I HQ PKSR LTL ASSKLLP P MIG P I M 
Sbjct: 1   MLLRSASTSILNPWKPHLKEASMEAEIAHQIPKSRPLTLCASSKLLPPPPMIGGPAINMM 60

Query: 61  MM---------------------GLCCGVDDVGESSDCGAEMVGGFVDGKFNCNGNGND- 120
                                  GL CGV +VGESSDCG  MVG  VDG    +G G D 
Sbjct: 61  RTLSVPDLSNLSAVAKRSPFLNGGLFCGVAEVGESSDCGGGMVGVSVDGGIGRDGCGGDG 120

Query: 121 ---NGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAE 180
              +GGD GCFGSWD D  E D A++++Q+MI+ NP++SLLLSNYA+FL EVRGDL+KAE
Sbjct: 121 GGSDGGDDGCFGSWDADR-ENDWADLYYQKMIEANPENSLLLSNYARFLMEVRGDLLKAE 180

Query: 181 EYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESYHLQATKTSPDNSFVFAAYARFLW 238
           EYCGR++ A  N+G+VISMYA+LIW NH DASRAESYHLQA KTSPD+SFV A+YARFLW
Sbjct: 181 EYCGRSISANPNDGNVISMYADLIWKNHKDASRAESYHLQAAKTSPDDSFVLASYARFLW 240

[Close]

BLAST of IVF0004254 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-33
Identity = 98/268 (36.57%), Postives = 141/268 (52.61%), Query Frame = 0


Query: 1   MLLRSPSTLILNP--WKPHFKESSAETV-ILHQFPKSRLLTLSASSKLL----------- 60
           MLLRS ST +LN        ++S  ETV  +HQ  + R +TLSASS              
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  -----------------------PVPHMIGPGIKMKMM--GLCCGV------DDVGESSD 120
                                  PV   +  G  M+ +  G+  G+      D +  + D
Sbjct: 61  DSSRRMKRTASDSDLRHLTSTKPPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWALD 120

Query: 121 CGAEMVGGFVDGKFNCNG----NGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPK 180
              E+ GG   G F+  G     G  +GGDGG           +D  ++H+++MI+ NP 
Sbjct: 121 EDTEVAGGGGGGMFHGGGKGRSGGRSDGGDGG-----------DDNTDVHYRKMIEANPG 180

Query: 181 DSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDASRAESY 220
           + + LSNYA+FLKEVR D +KAEEYCGRA+L   N+G+V++MYAEL+W  H D+SRAE+Y
Sbjct: 181 NGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENY 240

[Close]

BLAST of IVF0004254 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-30
Identity = 78/161 (48.45%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 66  GVDDVGESSDCGAEMVGGFVDGKFNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRM 125
           G  D   S+D    +V G   G     GN   NGG GG  GS       ED  + +++ M
Sbjct: 115 GQGDKASSNDRLETLVSGGGGGMGGSGGN-ICNGG-GGVGGSGVDGGRSEDATDTYYREM 174

Query: 126 IKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHMDA 185
           I +NP +SLL  NYA+FLKEV+GD+ KAEEYC RA+L   N+G+V+S+YA+LI  NH D 
Sbjct: 175 IDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNHQDR 234

Query: 186 SRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGEAL 227
            RA SY+ QA K SP++ +V A+YARFLW+VD++  D EAL
Sbjct: 235 QRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEED-EAL 272

[Close]

BLAST of IVF0004254 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 8.6e-30
Identity = 72/150 (48.00%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 77  GAEMVGGFVDGKFNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQRMIKTNPKDSLLL 136
           G+ +  G  +G F   G     GG GG  GS DG          +++ MI+  P D+LLL
Sbjct: 79  GSRLPQGGSNGGFGGRGGDGAGGGGGGGGGSVDG----------YYEEMIQRYPGDTLLL 138

Query: 137 SNYAQFLKEVRGDLIKAEEYCGRAMLAR-GNNGSVISMYAELIWSNHMDASRAESYHLQA 196
           SNYA+FLKEV+GD  KAEEYC RAML+  G +G ++SMY +LIW NH D  RA+SY+ QA
Sbjct: 139 SNYARFLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQA 198

Query: 197 TKTSPDNSFVFAAYARFLWEVDKEVLDGEA 226
            ++SPD+  V A+YARFLW+ ++EV + E+
Sbjct: 199 VQSSPDDCNVLASYARFLWDAEEEVEEEES 218

[Close]

BLAST of IVF0004254 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-21
Identity = 59/161 (36.65%), Postives = 88/161 (54.66%), Query Frame = 0


Query: 66  GVDDVGESSDCGAEMVGGF-VDGK-FNCNGNGNDNGGDGGCFGSWDGDHTEEDMAEMHFQ 125
           G +++  +   G+ + GG  V+ K F   G G  +G  GG      G + ++     +++
Sbjct: 96  GEEEIRFADGWGSMISGGLPVEEKCFTGGGVGGGSGYSGGYGNGGGGGYEDKSKIGDYYR 155

Query: 126 RMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWSNHM 185
            M+++NP +SLLL NY +FL EV  D   AEEY GRA+L    +G  +SMY  LIW    
Sbjct: 156 EMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKR 215

Query: 186 DASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKEVLDGE 225
           D  RA+ Y  QA   SP++  V  +YARF+WE + +  D E
Sbjct: 216 DEKRAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDE 256

[Close]

BLAST of IVF0004254 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 9.2e-16
Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 121 HFQRMIKTNPKDSLLLSNYAQFLKEVRGDLIKAEEYCGRAMLARGNNGSVISMYAELIWS 180
           +++ M++  P   LLL NYA+FL E +GDL  AEEY  +  +   ++G  ++ Y  L+  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 181 NHMDASRAESYHLQATKTSPDNSFVFAAYARFLWEVDKE 220
            H D ++A SY  +A + SPD+S V AAYA FLWE++ +
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINAD 221

The following BLAST results are available for this feature:

BLAST of IVF0004254 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDH3	2.9e-134	99.18	Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ...	[more]
A0A5A7V554	5.3e-120	97.32	EIN3-binding F-box protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0LL02	2.2e-102	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006810 PE=4 SV=1	[more]
A0A6J1G2S9	5.6e-69	57.74	uncharacterized protein LOC111450271 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A6J1KGA4	4.7e-68	57.14	uncharacterized protein LOC111493633 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of IVF0004254 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97822.1	7.05e-173	99.18	putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. ma...	[more]
KAA0061616.1	5.49e-153	97.32	EIN3-binding F-box protein 1 [Cucumis melo var. makuwa]	[more]
XP_011648683.2	1.01e-130	80.86	uncharacterized protein LOC105434540 [Cucumis sativus] >KGN60686.1 hypothetical ...	[more]
KAG6599396.1	1.71e-93	59.70	hypothetical protein SDJN03_09174, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545630.1	8.01e-90	58.89	uncharacterized protein LOC111805006 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0004254 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	3.7e-33	36.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	1.3e-30	48.45	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	8.6e-30	48.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	2.5e-21	36.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	9.2e-16	40.40	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 107..226 e-value: 1.3E-9 score: 39.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 116..217
None	No IPR available	PANTHER	PTHR26312:SF73	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 81..219 coord: 1..45
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 81..219 coord: 1..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004254.2	IVF0004254.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding