IVF0004173 (gene) Melon (IVF77) v1

Overview


Name	IVF0004173
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Location	chr02: 10505148 .. 10510132 (-)
RNA-Seq Expression	IVF0004173
Synteny	IVF0004173

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGTTCCACACTTTTGGCTCCATCAGTTACTCTCAGAAAGCTCCCACGAATTTCAGAATGAGAGCCGTCAACCCTTCCCTTCCATTTCCTCCTAACCAAACTTTCCCCAGTTTCCTTCCTCCAAACCCTAACCCTAATTCCCATATCCATGATTCTTCGCATTCTGAATCTCAACATCCTTCTCTCGACTTGCCTTCTTCCTTTTCCTCCCTCAATACCCTCATCCATCTCGCTAATCAACCCTTGAATCTCTCTCCTACCTCACCCCATCTGTTTTCGCGAACCATTCTCGTCTCCTTCACTGCTATTTTGATCGGCGCCACCGTGTCCCCCCGCATTCTCTCTTCCGTCACTCCCTCCTCTGCCCTTCTGCTTCCCTGCATCCTATTGACCCCACCCAACTTTTTCAATCCTTGCTTTACCCCCAAACGCTTCATTCATCTCATCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCGGATTCGGATGCAGACCTTTGCTTTTCTCTCACTGATTATACTGATGCCACTTCCAATTTCTTCTATGCTGATTGCCCTGGCGTCGTTGCATTGTCTAACCTTGATGAAATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCCGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTAGAGATGAATAGTACTTTGAATGGGATACGAATACTTCCTTCTGACTTGTGGATTCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAATAAGTATTCGTTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGCTTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATTGATGTTGCTTTGAGGGATCATATATTTTTGCTGTTTAGGTTGTGTTTTATGGCAATCTATAAGGAAGCTTTGGGGTTTCAAGTTGCCTTGGAAAAAGGTAACGGAATGGAGGGTGGATCAGTGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTAGCATCGCAGCTTTCCGTGTTGTACGGGGAAACAAACGGGAAATTCTTTGCTGTTAACATGCTTAGACAATGTATACTAGATGCTGCATTGCGGTTGCTTTTACCATCCGAACAAAAATCTACGGAGGGTCTGACTTTAGGAAAGGGTTGTCATGATCTCGAAATTAGTTGTAGTGACATACAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCAATGTTACTGGAGGAGAAACGGTCAATTGTAGGGTGATTCTTGTGTCCCAAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTGGAAGAAAAGATCAAAGCTTTACGCTTTGCTCATCTGCAAACAAAATATCAGCGGTATGTTCTACAATTACTAGTTCTGTTCTTCGTGTAGGTACTAGTTTTGATCAAGTTGATGTTGTCCCTAGTGTTATGATTGTGATATCATGTGTACAACAAATTTATGCTTGTTTTCTATTTTAGAAAGAAAAATAGTTGTTAGAAGACTTTAAAGGTAATGGGTCTAAGTCCATTGTGGTCTCCTACCTAGGATAGTAAACTTTTGGTGAGGTTTCCTGTGAAAGGCATGGAAGTATGTCTCGACTTTCTTAGATATTAAGTGAAATAAGATGACCAAAGGCGGGTCCCTTTGGGGACATCCGATAAAATTGGAATGATACAGAGAAATTTAGCATGGTCCCTATCACCCTGTGCAAGGATGACATGCACAAAAAATGATGACCAAAAGGATTCTAGAGTCTGTGTCTTTGGGGCATAATACAGATAAAGAAAACTACAGAGAGGAAAGTGAGGCAGCCTCTTGATTTTATTTATTGTAACTTCTTAAAGTTAAAACGGAACCTTTCCTATCCAAAAAAAAAAAAAGTAAACAAAACTATTGATTGAGGTATTGAATCTAACTTCAATCAAATTAATAAAGATTAGAGTAGTTTACCTGAATTTGTAGAGTCTCGGTTATTTACTGCATGCCTTTTATTTAATCATAATGATTTCTGTAAAAGTAAATGGAATCTCACTTTTCAAGTAGGCAATTTTTGGAATCAGACTAATCCATTCTTAACTATTTTAGGGTTTCTGAGTATAATTATATCTCTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTTATAATGAGGTATTTCTGAACTCTTTACTGTTCTGGTTATTAATCATGCAATTGTCAATTTTTTTCTGCCCGTCAATTTTTTCTGTTCATTTATTGATAATTTTAAATCTCATGAATTCTTCCTATTGACTGCTCTGAATGGGATACCATGGGAATAGAACATAAAAATTTGTAGATTCTCTATTCCAATAGGAGCTTATGAGATGACTGTTTTGTGATTCTTTTCCTGCATTTTGTGCACCTCCTTAATCCTTCCATATTATTTTATATATAAAAGAATAAACCTCCTGTAGCAATAAATGATGAAGCAGCAGCAGCAGCTGGCAGACTGCTTAATGTTCAGTGGCCCATGATGTTTCTTGTTTGTTTGTTTTATAAAAAGCAGGATGCAAACAAGACCAAAACAAGGGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCATACCGTGGAAAGAAGGCAAAGCGATCAACTTTACAGGTATCAGCTTGTTAGATTTTTCTCTTGTAGGATGATTCTTATTCATATACTTTCAACATTGCTTTTGTTATCTCTCTATTCTGTAGTAGTTATTGGAATAGGGTCTAACTATGGCATAACAATTCCTTTTCTTATAATCTTTTATGGAAAAATGTGAGATTATATATGTTTTCTAGCTTCTGCTTCAACTTTTGCCACCAGAAGTTTTTATGTCAGGTGATATCCTCACTCAAGATTTTGCTAATTTTACTTTCCGTGGAAGGTTACGAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGGTGCTTTGTCAAGGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAAGTGATCATAATATTACAAGAAATATTGTTGCTGACGTGCACACAAGAGGAAGCAACGACCCATGTGGAGATGCCAGACATAGCTCAGGTCATTCCAAGAAGCAGTCTTTTCATGATAGTAGATACTTGGTTTCTGATAAGCCACAAAAAGGTCATTATGAGCACTATGGCTCCCCGGAAGATGAAAGGAAAATTTCCCATAAGGACAAATATGATCGAGATCACTATCATAGGTTCTCAGATCAAAGCAGTATTCCTAGCCAGTCACACAAATGGAAGAGATATCCAAATGATCGAGATGATGAGGTGCCAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGGCTTCTAGCAGCTCCCATGGAAGATCATCTTCATCCTCAAGATCTGGGAATGGTTCAAGTGCAAGGAAGGATAGCCATAAGTTGAGAGCCAGTGATAGTTGGAAGAGGAACACGGCTGATAATCACAGTTCAGAGCATTTGGTGTCTAATTCATTCAGTGATAGGTATACCCCATCTGAATGTCATGACGAATTGGAAGATGAGTACTCCACTGTGAGCAGATTATCTAAATCCAGGTGAACATTAATTTTATGATCATTGAACGATGATAGGGTGTGCTGCATGCTGTGCTTTACTTTTTAACCTAACAAATCTCTACCTTGTGGTAAGTTTTCTTTTATGCTACATCCCAAGAATCTTTAGCTGTGCGTTCTTCTATTACAGTTTTTTCTTTAACATTTTTTATTCACACAACCTTGCAGCATGAAGTTTTATCTGGCTTCAGAAATTTTATCCTCACCTGTATCCTCCATAGTATCCTTGAAGTTTATATCCCATTTTCTTATACATTGAATCTTGTCTGAACCTCTATTCTTTCATTTATGTTTCTGAGAGATTTGCTACGAACTATGTTGCACTTGCATTTATTTGATTTAAATCATCATCGTATAAAAGATGCCAATTTTACATCCACTTTTTCTGTTCTAGGGTTGTCTTATAATTCTAGATTAATTGGCAGATTAATGAAGTCGTCAGAAAAATGATTCATTAATCACATTTTATGGAGGGTGCAACCAACTGTTAGTTATGGTTATGAAATTACCATGTTATGCGGTTGTTTCTTTTTGTACTCCTTGTTTGCTATGGTTCACACAATTTGGTGTTGCATCACTTGACCTTTACCTCTTCTTCTCGGTTGCAATTGGAGTTGGTCATTCAAAATCTTACTTGGAAAATTTAAAAATTGAAAAAAAAAGATCGTATAGGTTAGGCATTATAAACTGGTTACTCAGGCAATATCATTGAATAAGCCAAAGTTGTTTCCGGTCTATTCGTAGTGAGATGAAAGATTAATCTAGCAACTTGATAAACATTTTAGGCAATTACACTGGGTACTAGAACTCAACCTTATTACTGATGTTCTATTAGTTCTAACTTTTGTATTGTATTTAGTGTTTTGACCAACAGCCCAGTTTATCAGTGAAGTATTGAAGGCAGTCTGGCGATTAAGTTGATCCGTGGCCTACAACCCGCAGCATTTCAGATTGTCTTTTGCCGGTCGCTTCATCATACATTTATGCTCATAGTACGTACTTTTGGATTTATGAAGGTATGAATTTGGCTTCTTTGTATGTCTTCTGTCTTTTCCATTTTGGCTGCCCATGAGAGTGGGATATAAGTAAACATTGTTGGAAAAGCTGGAAAGAAGTGGTTGGAGAACTATTTATTTATTTACTTATAGAAGCATGTTAGGAAGATGATTGTTTAATCATATCATTTTCTGTATGGTGTGTGTGGTCTTTTAGAACAACATTGTGTGGATATTGCTTGTATTTCTCCCTAGGAGACAAGCATGCTGATGCGT

mRNA sequence

GTGAGTTCCACACTTTTGGCTCCATCAGTTACTCTCAGAAAGCTCCCACGAATTTCAGAATGAGAGCCGTCAACCCTTCCCTTCCATTTCCTCCTAACCAAACTTTCCCCAGTTTCCTTCCTCCAAACCCTAACCCTAATTCCCATATCCATGATTCTTCGCATTCTGAATCTCAACATCCTTCTCTCGACTTGCCTTCTTCCTTTTCCTCCCTCAATACCCTCATCCATCTCGCTAATCAACCCTTGAATCTCTCTCCTACCTCACCCCATCTGTTTTCGCGAACCATTCTCGTCTCCTTCACTGCTATTTTGATCGGCGCCACCGTGTCCCCCCGCATTCTCTCTTCCGTCACTCCCTCCTCTGCCCTTCTGCTTCCCTGCATCCTATTGACCCCACCCAACTTTTTCAATCCTTGCTTTACCCCCAAACGCTTCATTCATCTCATCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCGGATTCGGATGCAGACCTTTGCTTTTCTCTCACTGATTATACTGATGCCACTTCCAATTTCTTCTATGCTGATTGCCCTGGCGTCGTTGCATTGTCTAACCTTGATGAAATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCCGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTAGAGATGAATAGTACTTTGAATGGGATACGAATACTTCCTTCTGACTTGTGGATTCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAATAAGTATTCGTTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGCTTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATTGATGTTGCTTTGAGGGATCATATATTTTTGCTGTTTAGGTTGTGTTTTATGGCAATCTATAAGGAAGCTTTGGGGTTTCAAGTTGCCTTGGAAAAAGGTAACGGAATGGAGGGTGGATCAGTGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTAGCATCGCAGCTTTCCGTGTTGTACGGGGAAACAAACGGGAAATTCTTTGCTGTTAACATGCTTAGACAATGTATACTAGATGCTGCATTGCGGTTGCTTTTACCATCCGAACAAAAATCTACGGAGGGTCTGACTTTAGGAAAGGGTTGTCATGATCTCGAAATTAGTTGTAGTGACATACAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCAATGTTACTGGAGGAGAAACGGTCAATTGTAGGGTGATTCTTGTGTCCCAAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTGGAAGAAAAGATCAAAGCTTTACGCTTTGCTCATCTGCAAACAAAATATCAGCGGGTTTCTGAGTATAATTATATCTCTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTTATAATGAGGATGCAAACAAGACCAAAACAAGGGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCATACCGTGGAAAGAAGGCAAAGCGATCAACTTTACAGGTTACGAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGGTGCTTTGTCAAGGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAAGTGATCATAATATTACAAGAAATATTGTTGCTGACGTGCACACAAGAGGAAGCAACGACCCATGTGGAGATGCCAGACATAGCTCAGGTCATTCCAAGAAGCAGTCTTTTCATGATAGTAGATACTTGGTTTCTGATAAGCCACAAAAAGGTCATTATGAGCACTATGGCTCCCCGGAAGATGAAAGGAAAATTTCCCATAAGGACAAATATGATCGAGATCACTATCATAGGTTCTCAGATCAAAGCAGTATTCCTAGCCAGTCACACAAATGGAAGAGATATCCAAATGATCGAGATGATGAGGTGCCAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGGCTTCTAGCAGCTCCCATGGAAGATCATCTTCATCCTCAAGATCTGGGAATGGTTCAAGTGCAAGGAAGGATAGCCATAAGTTGAGAGCCAGTGATAGTTGGAAGAGGAACACGGCTGATAATCACAGTTCAGAGCATTTGGTGTCTAATTCATTCAGTGATAGGTATACCCCATCTGAATGTCATGACGAATTGGAAGATGAGTACTCCACTGTGAGCAGATTATCTAAATCCAGCATGAAGTTTTATCTGGCTTCAGAAATTTTATCCTCACCTGTATCCTCCATAGTATCCTTGAAGTTTATATCCCATTTTCTTATACATTGAATCTTGTCTGAACCTCTATTCTTTCATTTATGTTTCTGAGAGATTTGCTACGAACTATGTTGCACTTGCATTTATTTGATTTAAATCATCATCGTATAAAAGATGCCAATTTTACATCCACTTTTTCTGTTCTAGGGTTGTCTTATAATTCTAGATTAATTGGCAGATTAATGAAGTCGTCAGAAAAATGATTCATTAATCACATTTTATGGAGGGTGCAACCAACTGTTAGTTATGGTTATGAAATTACCATGTTATGCGGTTGTTTCTTTTTGTACTCCTTGTTTGCTATGGTTCACACAATTTGGTGTTGCATCACTTGACCTTTACCTCTTCTTCTCGGTTGCAATTGGAGTTGGTCATTCAAAATCTTACTTGGAAAATTTAAAAATTGAAAAAAAAAGATCGTATAGGTTAGGCATTATAAACTGGTTACTCAGGCAATATCATTGAATAAGCCAAAGTTGTTTCCGGTCTATTCGTAGTGAGATGAAAGATTAATCTAGCAACTTGATAAACATTTTAGGCAATTACACTGGGTACTAGAACTCAACCTTATTACTGATGTTCTATTAGTTCTAACTTTTGTATTGTATTTAGTGTTTTGACCAACAGCCCAGTTTATCAGTGAAGTATTGAAGGCAGTCTGGCGATTAAGTTGATCCGTGGCCTACAACCCGCAGCATTTCAGATTGTCTTTTGCCGGTCGCTTCATCATACATTTATGCTCATAGTACGTACTTTTGGATTTATGAAGGTATGAATTTGGCTTCTTTGTATGTCTTCTGTCTTTTCCATTTTGGCTGCCCATGAGAGTGGGATATAAGTAAACATTGTTGGAAAAGCTGGAAAGAAGTGGTTGGAGAACTATTTATTTATTTACTTATAGAAGCATGTTAGGAAGATGATTGTTTAATCATATCATTTTCTGTATGGTGTGTGTGGTCTTTTAGAACAACATTGTGTGGATATTGCTTGTATTTCTCCCTAGGAGACAAGCATGCTGATGCGT

Coding sequence (CDS)

ATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCCGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTAGAGATGAATAGTACTTTGAATGGGATACGAATACTTCCTTCTGACTTGTGGATTCTTAGAAGTGAGGTAGAAATTTGGAATGACTATCCCAATAAGTATTCGTTTGTTGTGCTTCGGTCCATATTGGGCTCAGAGATGCTTTTGAACAGCCATTTGATGACATGGATCATTGAAAATTCGCCTCGGTATGGTGTTGTTATTGATGTTGCTTTGAGGGATCATATATTTTTGCTGTTTAGGTTGTGTTTTATGGCAATCTATAAGGAAGCTTTGGGGTTTCAAGTTGCCTTGGAAAAAGGTAACGGAATGGAGGGTGGATCAGTGAATAGCTGTTTTAAGTGTCCGATTTTGATTCAAGTATTGATGTGGCTAGCATCGCAGCTTTCCGTGTTGTACGGGGAAACAAACGGGAAATTCTTTGCTGTTAACATGCTTAGACAATGTATACTAGATGCTGCATTGCGGTTGCTTTTACCATCCGAACAAAAATCTACGGAGGGTCTGACTTTAGGAAAGGGTTGTCATGATCTCGAAATTAGTTGTAGTGACATACAGAGTGTGAAGATGAACGAATTGGATCAGAAAGTTGTGAATAATGGCAATGTTACTGGAGGAGAAACGGTCAATTGTAGGGTGATTCTTGTGTCCCAAGTTGCTGCAGCTGTTGCAGCATTGCATGAGCGTTTCCTACTGGAAGAAAAGATCAAAGCTTTACGCTTTGCTCATCTGCAAACAAAATATCAGCGGGTTTCTGAGTATAATTATATCTCTCAAAGAGCTTGTGAAGAGCGCAAGAGACGTTGCAACTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTTATAATGAGGATGCAAACAAGACCAAAACAAGGGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCATACCGTGGAAAGAAGGCAAAGCGATCAACTTTACAGGTTACGAGAGATATTATTGAGGAATACATGGAGGAGATTATGAAAGCTGGAGGAATTGGGTGCTTTGTCAAGGGACCTGAAGAGAGAGGAATAAAATCTGAACAACCAAGTGATCATAATATTACAAGAAATATTGTTGCTGACGTGCACACAAGAGGAAGCAACGACCCATGTGGAGATGCCAGACATAGCTCAGGTCATTCCAAGAAGCAGTCTTTTCATGATAGTAGATACTTGGTTTCTGATAAGCCACAAAAAGGTCATTATGAGCACTATGGCTCCCCGGAAGATGAAAGGAAAATTTCCCATAAGGACAAATATGATCGAGATCACTATCATAGGTTCTCAGATCAAAGCAGTATTCCTAGCCAGTCACACAAATGGAAGAGATATCCAAATGATCGAGATGATGAGGTGCCAGCAGAAACCAGGCATCATGAAACTAAAAAGCTGGCTTCTAGCAGCTCCCATGGAAGATCATCTTCATCCTCAAGATCTGGGAATGGTTCAAGTGCAAGGAAGGATAGCCATAAGTTGAGAGCCAGTGATAGTTGGAAGAGGAACACGGCTGATAATCACAGTTCAGAGCATTTGGTGTCTAATTCATTCAGTGATAGGTATACCCCATCTGAATGTCATGACGAATTGGAAGATGAGTACTCCACTGTGAGCAGATTATCTAAATCCAGCATGAAGTTTTATCTGGCTTCAGAAATTTTATCCTCACCTGTATCCTCCATAGTATCCTTGAAGTTTATATCCCATTTTCTTATACATTGA

Protein sequence

MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRLLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPNDRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFISHFLIH

Homology

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BLAST of IVF0004173 vs. ExPASy Swiss-Prot
Match: Q9M8X2 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP48 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 6.6e-92
Identity = 231/562 (41.10%), Postives = 328/562 (58.36%), Query Frame = 0


Query: 3   KVFTLPRVLAVHCANFVGNDHLEMNSTLNG-IRILPSDLWILRSEVEIWNDYPNKYSFVV 62
           +  TLP VL+V C++FVG+D       L+  + +LPSDL  +++E++ W D+P+ YS  V
Sbjct: 189 RTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKNEIDQWRDFPSSYSSSV 248

Query: 63  LRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQV-- 122
           L SI+GS+++  S L  WI+ NS RYGV+ID  +RDHIFLLFRLC  +  KEA GF++  
Sbjct: 249 LSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVKEACGFRMES 308

Query: 123 -ALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL 182
            A + G        +S F+CP+ IQVL WLASQL+VLYGE NGKFFA++M +QCI+++A 
Sbjct: 309 DATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMFKQCIVESAS 368

Query: 183 RLLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNN--GNVTGGETVNCRV 242
           +++L       EG T  K C  +     D +    + + +K   N  G   G    + +V
Sbjct: 369 QVML----FRLEG-TRSK-CSGVVEDLDDARLRNKDVIMEKPFENSSGGECGKTLDSPQV 428

Query: 243 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 302
           I VS+V+AAVAAL+ER LLEEKI+A+R+A   T+YQR +E  +++ +A EER RRC+YRP
Sbjct: 429 ISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMTAKADEERNRRCSYRP 488

Query: 303 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 362
           II+HDG P+Q+S N+D +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY
Sbjct: 489 IIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLHDMIEEY 548

Query: 363 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 422
            EEI  AGGIGCF KG     ++S  P  ++   +        G + P  D +    +  
Sbjct: 549 TEEIKLAGGIGCFEKG---MPLQSRSPIGNDQKES------DFGYSIPSTDKQWKGENRA 608

Query: 423 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 482
              +       SDK ++  ++ Y S   +R+ SH+        ++ SD+     +  +  
Sbjct: 609 DIEYPIDNRQNSDKVKR--HDEYDSGSSQRQQSHRS-------YKHSDRRDDKLRDRRKD 668

Query: 483 RYPNDRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNT 542
           ++ + RDDE     RH         S  G S  + RS    S+    +K +  D +    
Sbjct: 669 KHNDRRDDEFTRTKRH---------SIEGESYQNYRSSREKSS--SDYKTKRDDPY---- 710

Query: 543 ADNHSSEHLVSNSFSDRYTPSE 559
            D  S +    N F DRY P+E
Sbjct: 729 -DRRSQQPRNQNLFEDRYIPTE 710

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BLAST of IVF0004173 vs. ExPASy Swiss-Prot
Match: Q9D361 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Mus musculus OX=10090 GN=Snrnp48 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 6.8e-04
Identity = 66/249 (26.51%), Postives = 110/249 (44.18%), Query Frame = 0


Query: 208 IQSVKMNELDQ-KVVNNGNVTGGETVNC-RVILVSQVAAAVAALHERFLLEEKIKALRFA 267
           I SV +N+  Q +++     T G+  +C    + S V   V   H+R + +         
Sbjct: 105 IPSVTLNKDSQFQIIKQARTTAGKDGDCYSQRMYSSVPVEVPLNHKRSVCD--------- 164

Query: 268 HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDG-----LPKQQSYNEDANKTKTRE 327
              T+  R++ Y+++     EE K++ +   +IE+D      L  + + +      K+  
Sbjct: 165 --LTQTDRLALYDFV----IEETKKKRSGPQVIENDSDLFVDLAAKVNQDNSRKSPKSYL 224

Query: 328 ELLAEERDYKRRRMSYRGKK---AKRSTLQVTRDIIEEYMEEIM-----KAGGIGCFVKG 387
           E+LAE RDYKRRR SYR K     K+S  +V RD+I+ +MEE+      + G  G   + 
Sbjct: 225 EILAEVRDYKRRRQSYRAKNVHITKKSYTEVIRDVIKVHMEELSSHWQEEQGRAGDAAEK 284

Query: 388 PEER---GIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSFHDSRYLVSD 439
            EER    + S Q     +  ++ +  H R        AR  S H +K++   S      
Sbjct: 285 NEERRSASVDSRQSGGSYL--DVESSRHRR--------ARSRSPHKRKRNKDKSSESRRR 328

[Close]

BLAST of IVF0004173 vs. ExPASy Swiss-Prot
Match: Q6IEG0 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP48 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 8.9e-04
Identity = 67/254 (26.38%), Postives = 108/254 (42.52%), Query Frame = 0


Query: 208 IQSVKMNELDQ-KVVNNGNVTGGETVNC-RVILVSQVAAAVAALHERFLLEEKIKALRFA 267
           I S+ +N+  Q +++       G+  +C    + S +   V   H+RF+ +         
Sbjct: 105 IPSITLNKDSQFQIIKQARTAVGKDSDCYNQRIYSSLPVEVPLNHKRFVCD--------- 164

Query: 268 HLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEHDG-----LPKQQSYNEDANKTKTRE 327
              T+  R++ Y+++     EE K++ +   IIE+D      L  + + +      K+  
Sbjct: 165 --LTQADRLALYDFV----VEETKKKRSDSQIIENDSDLFVDLAAKINQDNSRKSPKSYL 224

Query: 328 ELLAEERDYKRRRMSYRGKK---AKRSTLQVTRDIIEEYMEEIMKAGGIGCFVKGPEERG 387
           E+LAE RDYKRRR SYR K     K+S  +V RD+I  +MEE+             +E  
Sbjct: 225 EILAEVRDYKRRRQSYRAKNVHITKKSYTEVIRDVINVHMEELSNHW---------QEEQ 284

Query: 388 IKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSFHDSRYLVSDKPQKGHYE 447
            K+E  ++ N  R   A V +R S     DA  S     +      R    DK +     
Sbjct: 285 EKAEDDAEKNEERR-SASVDSRQSGGSYLDAECSRHRRDRSRSPHKRKRNKDKDKNCESR 333

Query: 448 HYGSPEDERKISHK 452
                + ER  SHK
Sbjct: 345 RRKERDGERHHSHK 333

[Close]

BLAST of IVF0004173 vs. ExPASy TrEMBL
Match: A0A1S3B9I2 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 GN=LOC103487266 PE=4 SV=1)

HSP 1 Score: 1185.6 bits (3066), Expect = 0.0e+00
Identity = 606/606 (100.00%), Postives = 606/606 (100.00%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL
Sbjct: 300 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 359

Query: 181 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 240
           LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS
Sbjct: 360 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 419

Query: 241 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 300
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH
Sbjct: 420 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 479

Query: 301 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 360
           DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI
Sbjct: 480 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 539

Query: 361 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 420
           MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF
Sbjct: 540 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 599

Query: 421 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 480
           HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN
Sbjct: 600 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 659

Query: 481 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 540
           DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH
Sbjct: 660 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 719

Query: 541 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFI 600
           SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFI
Sbjct: 720 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFI 779

Query: 601 SHFLIH 607
           SHFLIH
Sbjct: 780 SHFLIH 785

[Close]

BLAST of IVF0004173 vs. ExPASy TrEMBL
Match: A0A5D3BCH1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00550 PE=4 SV=1)

HSP 1 Score: 1133.6 bits (2931), Expect = 0.0e+00
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL
Sbjct: 300 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 359

Query: 181 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 240
           LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS
Sbjct: 360 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 419

Query: 241 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 300
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH
Sbjct: 420 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 479

Query: 301 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 360
           DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI
Sbjct: 480 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 539

Query: 361 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 420
           MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF
Sbjct: 540 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 599

Query: 421 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 480
           HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN
Sbjct: 600 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 659

Query: 481 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 540
           DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH
Sbjct: 660 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 719

Query: 541 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 577
           SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS
Sbjct: 720 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755

[Close]

BLAST of IVF0004173 vs. ExPASy TrEMBL
Match: A0A5A7T4I0 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002790 PE=4 SV=1)

HSP 1 Score: 1130.5 bits (2923), Expect = 0.0e+00
Identity = 575/576 (99.83%), Postives = 575/576 (99.83%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL
Sbjct: 300 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 359

Query: 181 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 240
           LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS
Sbjct: 360 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 419

Query: 241 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 300
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH
Sbjct: 420 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 479

Query: 301 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 360
           DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI
Sbjct: 480 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 539

Query: 361 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 420
           MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF
Sbjct: 540 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 599

Query: 421 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 480
           HDSRYLVSDKPQKGHYE YGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN
Sbjct: 600 HDSRYLVSDKPQKGHYEQYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 659

Query: 481 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 540
           DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH
Sbjct: 660 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 719

Query: 541 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 577
           SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS
Sbjct: 720 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755

[Close]

BLAST of IVF0004173 vs. ExPASy TrEMBL
Match: A0A6J1KPX5 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497626 PE=4 SV=1)

HSP 1 Score: 835.5 bits (2157), Expect = 1.4e-238
Identity = 443/579 (76.51%), Postives = 498/579 (86.01%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGND--HLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYS 60
           MSKVFTLPRVLAV CANFV +D    EM S+L GIR+LPSDLW LR EVE+WNDYP+ YS
Sbjct: 175 MSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYS 234

Query: 61  FVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 120
            +V+RSILGSEM +++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 235 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 294

Query: 121 VALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL 180
           +ALE GNGMEGGS N  FKCPIL+QVL+WLASQLSVLYGE +GKFFA+NMLRQ IL AA 
Sbjct: 295 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAAS 354

Query: 181 RL-LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVI 240
            L LLP EQK  E  TL +G H+L  SCSD QSV + +LD KV+NN  VTG ETVNCRVI
Sbjct: 355 GLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVI 414

Query: 241 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPI 300
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+NYISQRACEERKRRC+YRPI
Sbjct: 415 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPI 474

Query: 301 IEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM 360
           IEHDGLPKQQS++ED +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM
Sbjct: 475 IEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM 534

Query: 361 EEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDAR-HSSGHSK 420
           +EIMKAGGIG FVKG EERGIKSEQP+DH ITR+ +AD HT+GSN   G+ R HSS HS+
Sbjct: 535 DEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSR 594

Query: 421 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 480
           KQS +D+RY  S+KP KG   HYGSPEDERK   KDKYDR+HYHRFS++SS PSQSHKWK
Sbjct: 595 KQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWK 654

Query: 481 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 540
           RYP+DRDDE PAETRHH+++ L+SSSS  HG RSSSSSRSG  SSARKD HKLRASDSWK
Sbjct: 655 RYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWK 714

Query: 541 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSR 573
           RNTADNHSS+ LV NSF+DRYTPS+CHD+LED++S   R
Sbjct: 715 RNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRR 753

[Close]

BLAST of IVF0004173 vs. ExPASy TrEMBL
Match: A0A6J1EI02 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111434345 PE=4 SV=1)

HSP 1 Score: 834.7 bits (2155), Expect = 2.4e-238
Identity = 443/579 (76.51%), Postives = 497/579 (85.84%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGND--HLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYS 60
           MSKVFTLPRVLAV CANFV +D    EM S+L GI +LPSDLW LRSEVE+WNDYP+ YS
Sbjct: 201 MSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIIMLPSDLWALRSEVEMWNDYPSVYS 260

Query: 61  FVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 120
            +V+RSILGSEM +++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 261 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 320

Query: 121 VALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL 180
           +ALE GNGMEGGS N  FKCPIL+QVL+WLASQLSVLYGE NGKFFA+NMLRQ IL AA 
Sbjct: 321 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMNGKFFAINMLRQRILYAAS 380

Query: 181 RL-LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVI 240
            L LLP EQK  E  TL +G H+L  SCSD +SV + ELD+KV+NN  V+G ETVNCRVI
Sbjct: 381 GLSLLPYEQKRVESPTLVEGSHNLVSSCSDTRSVNLKELDKKVINNVYVSGEETVNCRVI 440

Query: 241 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPI 300
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+NYISQRACEERKRRCNYRPI
Sbjct: 441 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCNYRPI 500

Query: 301 IEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM 360
           IEHDGLPKQQS++ED +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM
Sbjct: 501 IEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM 560

Query: 361 EEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHS-SGHSK 420
           +EIMKAGGIG FVKG EERGIKSEQP+DH ITR+ +AD HT+GSN   G+ RH  S HS+
Sbjct: 561 DEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHISSHSR 620

Query: 421 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 480
           KQS +D+RY  S+KP KG Y HYGSPEDERK    DKYDR+HYHRFSD+SS PSQSHKWK
Sbjct: 621 KQSNYDNRYSASEKPPKGRYGHYGSPEDERKSVGIDKYDREHYHRFSDRSSSPSQSHKWK 680

Query: 481 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 540
           RYP+DRDDE PAETRHH+++ L+SSSS  HG RSSSSSRSG  SSARKD HKLRASDSWK
Sbjct: 681 RYPSDRDDEKPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGDSSARKDGHKLRASDSWK 740

Query: 541 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSR 573
           RNTADNHSS+  V N F+DRYTPS+CHD+LED++ST  R
Sbjct: 741 RNTADNHSSDSSVLNPFNDRYTPSKCHDQLEDDHSTGRR 779

[Close]

BLAST of IVF0004173 vs. NCBI nr
Match: XP_008443753.1 (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo])

HSP 1 Score: 1183 bits (3061), Expect = 0.0
Identity = 606/606 (100.00%), Postives = 606/606 (100.00%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL
Sbjct: 300 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 359

Query: 181 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 240
           LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS
Sbjct: 360 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 419

Query: 241 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 300
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH
Sbjct: 420 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 479

Query: 301 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 360
           DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI
Sbjct: 480 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 539

Query: 361 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 420
           MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF
Sbjct: 540 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 599

Query: 421 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 480
           HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN
Sbjct: 600 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 659

Query: 481 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 540
           DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH
Sbjct: 660 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 719

Query: 541 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFI 600
           SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFI
Sbjct: 720 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKSSMKFYLASEILSSPVSSIVSLKFI 779

Query: 601 SHFLIH 606
           SHFLIH
Sbjct: 780 SHFLIH 785

[Close]

BLAST of IVF0004173 vs. NCBI nr
Match: TYJ97003.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 1132 bits (2927), Expect = 0.0
Identity = 576/576 (100.00%), Postives = 576/576 (100.00%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL
Sbjct: 300 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 359

Query: 181 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 240
           LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS
Sbjct: 360 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 419

Query: 241 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 300
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH
Sbjct: 420 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 479

Query: 301 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 360
           DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI
Sbjct: 480 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 539

Query: 361 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 420
           MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF
Sbjct: 540 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 599

Query: 421 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 480
           HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN
Sbjct: 600 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 659

Query: 481 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 540
           DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH
Sbjct: 660 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 719

Query: 541 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 576
           SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS
Sbjct: 720 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755

[Close]

BLAST of IVF0004173 vs. NCBI nr
Match: KAA0038392.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 1129 bits (2919), Expect = 0.0
Identity = 575/576 (99.83%), Postives = 575/576 (99.83%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL
Sbjct: 300 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 359

Query: 181 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 240
           LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS
Sbjct: 360 LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILVS 419

Query: 241 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 300
           QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH
Sbjct: 420 QVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIEH 479

Query: 301 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 360
           DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI
Sbjct: 480 DGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEEI 539

Query: 361 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 420
           MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF
Sbjct: 540 MKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQSF 599

Query: 421 HDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 480
           HDSRYLVSDKPQKGHYE YGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN
Sbjct: 600 HDSRYLVSDKPQKGHYEQYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYPN 659

Query: 481 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 540
           DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH
Sbjct: 660 DRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADNH 719

Query: 541 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 576
           SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS
Sbjct: 720 SSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 755

[Close]

BLAST of IVF0004173 vs. NCBI nr
Match: XP_031743015.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativus] >KAE8653591.1 hypothetical protein Csa_007460 [Cucumis sativus])

HSP 1 Score: 1002 bits (2590), Expect = 0.0
Identity = 526/577 (91.16%), Postives = 537/577 (93.07%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDH EMNSTLNGIRILPSDLW LRSEVEIWNDYP+KYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEG S NSCFKCPILIQVLMWLASQLSVLYGETNG FFAVNMLRQCILDAA  L
Sbjct: 300 LEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGL 359

Query: 181 LL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILV 240
           LL  SEQKSTE LTLG+G HDLEISCSD QSVKMNELDQKVVNNG+      VNC VILV
Sbjct: 360 LLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVILV 419

Query: 241 SQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIE 300
           SQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKRRCNYRPIIE
Sbjct: 420 SQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIE 479

Query: 301 HDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEE 360
           HDGLPKQQS+NEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEE
Sbjct: 480 HDGLPKQQSHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMEE 539

Query: 361 IMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQS 420
           IMKAGGIG FVKGPEERGIKSEQPSDHN+T+NI ADVHTRGSND  GDARHSSGHSKKQS
Sbjct: 540 IMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVHTRGSNDSYGDARHSSGHSKKQS 599

Query: 421 FHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRYP 480
            +DSRYL S+KPQK HY HY SPEDERKIS KDKYDRDHYHRF DQSS PSQSHKWKRYP
Sbjct: 600 NYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWKRYP 659

Query: 481 NDRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTADN 540
           NDRDDEV AETRHHETKKL SSSSHGRSSSSSRSG GSSARK S+KLRASDSWK NTADN
Sbjct: 660 NDRDDEVTAETRHHETKKLTSSSSHGRSSSSSRSGGGSSARKVSNKLRASDSWKMNTADN 719

Query: 541 HSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 576
           HSSEHLV NSF+DRYTPS+CHDELEDEYSTVSRLSKS
Sbjct: 720 HSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKS 751

[Close]

BLAST of IVF0004173 vs. NCBI nr
Match: XP_031743009.1 (U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus] >XP_031743013.1 U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus])

HSP 1 Score: 997 bits (2578), Expect = 0.0
Identity = 526/578 (91.00%), Postives = 537/578 (92.91%), Query Frame = 0


Query: 1   MSKVFTLPRVLAVHCANFVGNDHLEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYSFV 60
           MSKVFTLPRVLAVHCANFVGNDH EMNSTLNGIRILPSDLW LRSEVEIWNDYP+KYSFV
Sbjct: 180 MSKVFTLPRVLAVHCANFVGNDHFEMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYSFV 239

Query: 61  VLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 120
           VLRSILGSEM LNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA
Sbjct: 240 VLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQVA 299

Query: 121 LEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAALRL 180
           LEKGNGMEG S NSCFKCPILIQVLMWLASQLSVLYGETNG FFAVNMLRQCILDAA  L
Sbjct: 300 LEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAASGL 359

Query: 181 LL-PSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVILV 240
           LL  SEQKSTE LTLG+G HDLEISCSD QSVKMNELDQKVVNNG+      VNC VILV
Sbjct: 360 LLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVILV 419

Query: 241 SQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPIIE 300
           SQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYN I QRACEERKRRCNYRPIIE
Sbjct: 420 SQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNDIFQRACEERKRRCNYRPIIE 479

Query: 301 HDGLPKQQSYNE-DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYME 360
           HDGLPKQQS+NE DANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYME
Sbjct: 480 HDGLPKQQSHNEQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYME 539

Query: 361 EIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSKKQ 420
           EIMKAGGIG FVKGPEERGIKSEQPSDHN+T+NI ADVHTRGSND  GDARHSSGHSKKQ
Sbjct: 540 EIMKAGGIGRFVKGPEERGIKSEQPSDHNLTKNITADVHTRGSNDSYGDARHSSGHSKKQ 599

Query: 421 SFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWKRY 480
           S +DSRYL S+KPQK HY HY SPEDERKIS KDKYDRDHYHRF DQSS PSQSHKWKRY
Sbjct: 600 SNYDSRYLASEKPQKSHYGHYVSPEDERKISSKDKYDRDHYHRFLDQSSGPSQSHKWKRY 659

Query: 481 PNDRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNTAD 540
           PNDRDDEV AETRHHETKKL SSSSHGRSSSSSRSG GSSARK S+KLRASDSWK NTAD
Sbjct: 660 PNDRDDEVTAETRHHETKKLTSSSSHGRSSSSSRSGGGSSARKVSNKLRASDSWKMNTAD 719

Query: 541 NHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSRLSKS 576
           NHSSEHLV NSF+DRYTPS+CHDELEDEYSTVSRLSKS
Sbjct: 720 NHSSEHLVFNSFNDRYTPSDCHDELEDEYSTVSRLSKS 752

[Close]

BLAST of IVF0004173 vs. TAIR 10
Match: AT3G04160.1 (unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0; Bacteria - 64; Metazoa - 693; Fungi - 201; Plants - 207; Viruses - 0; Other Eukaryotes - 546 (source: NCBI BLink). )

HSP 1 Score: 339.7 bits (870), Expect = 4.7e-93
Identity = 231/562 (41.10%), Postives = 328/562 (58.36%), Query Frame = 0


Query: 3   KVFTLPRVLAVHCANFVGNDHLEMNSTLNG-IRILPSDLWILRSEVEIWNDYPNKYSFVV 62
           +  TLP VL+V C++FVG+D       L+  + +LPSDL  +++E++ W D+P+ YS  V
Sbjct: 189 RTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKNEIDQWRDFPSSYSSSV 248

Query: 63  LRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQV-- 122
           L SI+GS+++  S L  WI+ NS RYGV+ID  +RDHIFLLFRLC  +  KEA GF++  
Sbjct: 249 LSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVKEACGFRMES 308

Query: 123 -ALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL 182
            A + G        +S F+CP+ IQVL WLASQL+VLYGE NGKFFA++M +QCI+++A 
Sbjct: 309 DATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMFKQCIVESAS 368

Query: 183 RLLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNN--GNVTGGETVNCRV 242
           +++L       EG T  K C  +     D +    + + +K   N  G   G    + +V
Sbjct: 369 QVML----FRLEG-TRSK-CSGVVEDLDDARLRNKDVIMEKPFENSSGGECGKTLDSPQV 428

Query: 243 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRP 302
           I VS+V+AAVAAL+ER LLEEKI+A+R+A   T+YQR +E  +++ +A EER RRC+YRP
Sbjct: 429 ISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMTAKADEERNRRCSYRP 488

Query: 303 IIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEY 362
           II+HDG P+Q+S N+D +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IEEY
Sbjct: 489 IIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLHDMIEEY 548

Query: 363 MEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGHSK 422
            EEI  AGGIGCF KG     ++S  P  ++   +        G + P  D +    +  
Sbjct: 549 TEEIKLAGGIGCFEKG---MPLQSRSPIGNDQKES------DFGYSIPSTDKQWKGENRA 608

Query: 423 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 482
              +       SDK ++  ++ Y S   +R+ SH+        ++ SD+     +  +  
Sbjct: 609 DIEYPIDNRQNSDKVKR--HDEYDSGSSQRQQSHRS-------YKHSDRRDDKLRDRRKD 668

Query: 483 RYPNDRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKRNT 542
           ++ + RDDE     RH         S  G S  + RS    S+    +K +  D +    
Sbjct: 669 KHNDRRDDEFTRTKRH---------SIEGESYQNYRSSREKSS--SDYKTKRDDPY---- 710

Query: 543 ADNHSSEHLVSNSFSDRYTPSE 559
            D  S +    N F DRY P+E
Sbjct: 729 -DRRSQQPRNQNLFEDRYIPTE 710

[Close]

BLAST of IVF0004173 vs. TAIR 10
Match: AT3G04160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage. )

HSP 1 Score: 328.2 bits (840), Expect = 1.4e-89
Identity = 229/564 (40.60%), Postives = 324/564 (57.45%), Query Frame = 0


Query: 3   KVFTLPRVLAVHCANFVGNDHLEMNSTLNG-IRILPSDLWILRSEVEIWNDYPNKYSFVV 62
           +  TLP VL+V C++FVG+D       L+  + +LPSDL  +++E++ W D+P+ YS  V
Sbjct: 189 RTLTLPHVLSVECSDFVGSDEKVKKIVLDKCLGVLPSDLCAMKNEIDQWRDFPSSYSSSV 248

Query: 63  LRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQV-- 122
           L SI+GS+++  S L  WI+ NS RYGV+ID  +RDHIFLLFRLC  +  KEA GF++  
Sbjct: 249 LSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVKEACGFRMES 308

Query: 123 -ALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL 182
            A + G        +S F+CP+ IQVL WLASQL+VLYGE NGKFFA++M +QCI+++A 
Sbjct: 309 DATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMFKQCIVESAS 368

Query: 183 RLLLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNN--GNVTGGETVNCRV 242
           +++L       EG T  K C  +     D +    + + +K   N  G   G    + +V
Sbjct: 369 QVML----FRLEG-TRSK-CSGVVEDLDDARLRNKDVIMEKPFENSSGGECGKTLDSPQV 428

Query: 243 ILVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYIS--QRACEERKRRCNY 302
           I VS+V+AAVAAL+ER LLEEKI+A+R+A   T+YQR+    ++S       ER RRC+Y
Sbjct: 429 ISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRIISCLHLSLIPHDVSERNRRCSY 488

Query: 303 RPIIEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIE 362
           RPII+HDG P+Q+S N+D +K KTREELLAEERDYKRRRMSYRGKK KR+  QV  D+IE
Sbjct: 489 RPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKVKRTPRQVLHDMIE 548

Query: 363 EYMEEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDARHSSGH 422
           EY EEI  AGGIGCF KG     ++S  P  ++   +        G + P  D +    +
Sbjct: 549 EYTEEIKLAGGIGCFEKG---MPLQSRSPIGNDQKES------DFGYSIPSTDKQWKGEN 608

Query: 423 SKKQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHK 482
                +       SDK ++  ++ Y S   +R+ SH+        ++ SD+     +  +
Sbjct: 609 RADIEYPIDNRQNSDKVKR--HDEYDSGSSQRQQSHRS-------YKHSDRRDDKLRDRR 668

Query: 483 WKRYPNDRDDEVPAETRHHETKKLASSSSHGRSSSSSRSGNGSSARKDSHKLRASDSWKR 542
             ++ + RDDE     RH         S  G S  + RS    S+    +K +  D +  
Sbjct: 669 KDKHNDRRDDEFTRTKRH---------SIEGESYQNYRSSREKSS--SDYKTKRDDPY-- 712

Query: 543 NTADNHSSEHLVSNSFSDRYTPSE 559
              D  S +    N F DRY P+E
Sbjct: 729 ---DRRSQQPRNQNLFEDRYIPTE 712

The following BLAST results are available for this feature:

BLAST of IVF0004173 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M8X2	6.6e-92	41.10	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana O...	[more]
Q9D361	6.8e-04	26.51	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q6IEG0	8.9e-04	26.38	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Homo sapiens OX=9606 G...	[more]

BLAST of IVF0004173 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9I2	0.0e+00	100.00	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo OX=3656 G...	[more]
A0A5D3BCH1	0.0e+00	100.00	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. maku...	[more]
A0A5A7T4I0	0.0e+00	99.83	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucumis melo var. maku...	[more]
A0A6J1KPX5	1.4e-238	76.51	U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 OS=Cucurbita m...	[more]
A0A6J1EI02	2.4e-238	76.51	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Cucurbita moschata OX=...	[more]

BLAST of IVF0004173 vs. NCBI nr


Match Name	Identity	Description
XP_008443753.1	100.00	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo]	[more]
TYJ97003.1	100.00	U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa...	[more]
KAA0038392.1	99.83	U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Cucumis melo var. makuwa...	[more]
XP_031743015.1	91.16	U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativ...	[more]
XP_031743009.1	91.00	U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativ...	[more]

BLAST of IVF0004173 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04160.1	4.7e-93	41.10	unknown protein; Has 1711 Blast hits to 1353 proteins in 195 species: Archae - 0...	[more]
AT3G04160.2	1.4e-89	40.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 475..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 518..540
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 501..517
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..463
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..551
None	No IPR available	PANTHER	PTHR21402	UNCHARACTERIZED	coord: 2..558
IPR032845	U11/U12 small nuclear ribonucleoprotein 48kDa protein	PANTHER	PTHR21402:SF10	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN	coord: 2..558

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004173.3	IVF0004173.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding