IVF0004170 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGAGATAAGTTCTGCACGTGTTTGAACAATTTAGCCACCAAGTTATGATTGTTTTGAATCAGAAACAAGACAAATAGAAAGAGTCTAAGACAGAGTACTGTTGTTTTCAGACACTATAGGGATACTAGACTAGAGACTATCTTTAGACTTTTGGGGAAACATAGATTGACACTAAAAAGAAAGAAAAACAAACAAAAAAGAGTGGGGCTTTTCTTTTCTTTCAATGGCCATTAGTTTTCCCTATAGGATCATTTGCACATGTGACCCTCTTCAATACGAAACCATCCTCAACCTTCATCTTTTTTTGACACGTACCACACATATCGACACTACCAAATTCTGTTCCACCAAAACTTTACTTATTAATAAGTAATAATATAATGCATGTTAGGCAGGGAGTGGAAAATTAATCCCATCTACTTATTCCCCCATTAAGGTTTTCTTTAGCTAAAGCTTCTCCCTACACATTTTAAGGAATTTATGCCTCGTTGACATGTCAAGAAGTTCAGTTCATAGCTAATAGGTAAAGAAAACTTTCAGTACTTTTGGTGTATTCTGGTGATCTGTTGGTGAGAAGTATAAGTGGACTAGAGAGTCTCATACGAGTATGGGAAAGATTCTCATCTCTTTCTTTTTACTCTTATATTTCGTCTTATCCTCGTTTGTTAAAGTACAATGTAACTGACAAAGTAATGGTAAAGAACAAACCAAGAAGGGGAAGATTTTTTTTAATCCAATTTTCTATACATATATAGTTAACTACATAACTTTTTTTTTTTTCCAATTTTCTTTTTTAATCTTATTACTGTGTGATTAGAGTGTGCAGCACGATAATGGGTGCAACCAAGGTTCAAGTATTGCTATTCTTTTCCTCCTCATTTTCTCATTTTTAGAAGTCTTTAGCTCTTTTTTTTTTTCCAGATTTTACTGGCTTTTTGAAGAAAATGGCGTTAATACAAAGCGGCTATTCCCTGTCATCCGAGTGCCCAATATCAGAGTGAAATAGAAGCCCTTCCTTATATGTATATGTTTTCATATCCACATGTATTTAACTTAATCATCTAGCTCCTCTAGGCTCAACCCAGAGCAGTGAAATGGAAGGGGAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGTGTGTTTTGTGGAAGCAGCACAGGAAAGAGAGACTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTACGCTTTGAAAATCTCTCTTAATATCACCCATTTACGAAAGCCTCTGTCTTTTTCACTTTCCCCCTTCCTTCCTTTCTACGTGTATGTACATATTATGCTGTTGTTTCTCTATGCAGGTTTCAAGAAGATTAGGGCTTGTCTATGGAGGTGGAAGCATTGGGCTAATGGGTCTGGTTTCCCAGGCTGTTCATCATGGTGGCGGCAGAGTCATGGGGTAAGTGATCGAAACAACTTGAATTTCTATTCAGAAAATGGTTTGATGTTTCAAAGTTTTAATTTTAGATATGTTTGTTTAATTTGTTTGGGTTTGGTTGATTTGCAGGATCATTCCCAGGACATTAATGAACAAAGAGGTCAGAAATATGCCAATAGCCTAATTTGTTATTTAATTTGTTTTGGCTAATTGAAAATTCAATCAGCCAAAACACAACTTGTTATTCTATAAAATGATAATTCTTGGAGGAAAAATTATAGATAACTGGAGAAACAGTGGGAGAGATAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATAGCCCTTCCAGGTCCCATCCATTCCCTTTTCCCTTTCCTATTCAGAAACACAATCCCGCACTTCTTTCTTACATTTCTTATCATAGTCCCCTTTTTAAAAAAGACCACTGATAATGGGTTTCATTTTCCCTTCACTGCACTGATTTTCAGGTGGGTATGGAACTATGGAAGAACTGTTAGAAGTCATCACATGGGCTCAACTAGGCATCCACGACAAACCAGTAAACTCTACAAAAATTACCTCATTAAACTCTGCTAGAAAGCTTTGTTTTGATCTCACGACCTTTAAGTTTGTTGTGCAATTTCTCTTCCTCAGGTTGGGTTGCTGAATGTGGAGGGCTACTACAACAACCTCCTCACTTTCATCGACCAAGCAGTGGAGGATGGTTTCATAAAACCATCACAACGCAACATCATAGTGTCAGCACCCAACGCCAAGGACCTGATTCAGAAACTAGAGGTCAGTCATTAAGTCAGACATTTCGTCGAACAGTTAATGGGCAACTTTTGCGACTAAAAGGTAAGCAGAGTATTTGACTAATGATGATCATGAATTGGTTTACTTAGGAATACGTGTCTGTACGCGAGGAAGTGATGGGCAAAGCGAGATGAGAAATTGAGCAGCCACAGCCACAGCAACAGAAAAAACAATTGGGGTTCGAACCCAAAACCTTCCACGCTCAGATCGCCCTGTAAAGTTGAAACATGAAAAGAAAGGGAAAAAAGGATTGAGTGAAAGAAATGGAAAATAGGCGTTTGATGATTTTGGGTCGTCGTCGTGATCATAATCATCATGTTACGAACTCTTGTATAATTGGATTGGATGTGAAAAATGTTCACAGAGATAAGATTGACCAAAACACTGAAATCAGTGGGACCTTCTAATCTTTTGCTTGTAAGGTTTTTTCCACCCCTATGAAATAGTATTATTAAGATTAAGAACAAAAAATGGGCCCACC CTGGAGATAAGTTCTGCACGTGTTTGAACAATTTAGCCACCAAGTTATGATTGTTTTGAATCAGAAACAAGACAAATAGAAAGAGTCTAAGACAGAGTACTGTTGTTTTCAGACACTATAGGGATACTAGACTAGAGACTATCTTTAGACTTTTGGGGAAACATAGATTGACACTAAAAAGAAAGAAAAACAAACAAAAAAGAGTGGGGCTTTTCTTTTCTTTCAATGGCCATTAGTTTTCCCTATAGGATCATTTGCACATGTGACCCTCTTCAATACGAAACCATCCTCAACCTTCATCTTTTTTTGACACGTACCACACATATCGACACTACCAAATTCTGTTCCACCAAAACTTTACTTATTAATAAGTAATAATATAATGCATGTTAGGCAGGGAGTGGAAAATTAATCCCATCTACTTATTCCCCCATTAAGGTTTTCTTTAGCTAAAGCTTCTCCCTACACATTTTAAGGAATTTATGCCTCGTTGACATGTCAAGAAGTTCAGTTCATAGCTAATAGATTTTACTGGCTTTTTGAAGAAAATGGCGTTAATACAAAGCGGCTATTCCCTGTCATCCGAGTGCCCAATATCAGAGTGAAATAGAAGCCCTTCCTTATATGTATATGTTTTCATATCCACATGTATTTAACTTAATCATCTAGCTCCTCTAGGCTCAACCCAGAGCAGTGAAATGGAAGGGGAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGTGTGTTTTGTGGAAGCAGCACAGGAAAGAGAGACTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTTTCAAGAAGATTAGGGCTTGTCTATGGAGGTGGAAGCATTGGGCTAATGGGTCTGGTTTCCCAGGCTGTTCATCATGGTGGCGGCAGAGTCATGGGGATCATTCCCAGGACATTAATGAACAAAGAGATAACTGGAGAAACAGTGGGAGAGATAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATAGCCCTTCCAGGTGGGTATGGAACTATGGAAGAACTGTTAGAAGTCATCACATGGGCTCAACTAGGCATCCACGACAAACCAGTTGGGTTGCTGAATGTGGAGGGCTACTACAACAACCTCCTCACTTTCATCGACCAAGCAGTGGAGGATGGTTTCATAAAACCATCACAACGCAACATCATAGTGTCAGCACCCAACGCCAAGGACCTGATTCAGAAACTAGAGGAATACGTGTCTGTACGCGAGGAAGTGATGGGCAAAGCGAGATGAGAAATTGAGCAGCCACAGCCACAGCAACAGAAAAAACAATTGGGGTTCGAACCCAAAACCTTCCACGCTCAGATCGCCCTGTAAAGTTGAAACATGAAAAGAAAGGGAAAAAAGGATTGAGTGAAAGAAATGGAAAATAGGCGTTTGATGATTTTGGGTCGTCGTCGTGATCATAATCATCATGTTACGAACTCTTGTATAATTGGATTGGATGTGAAAAATGTTCACAGAGATAAGATTGACCAAAACACTGAAATCAGTGGGACCTTCTAATCTTTTGCTTGTAAGGTTTTTTCCACCCCTATGAAATAGTATTATTAAGATTAAGAACAAAAAATGGGCCCACC ATGGAAGGGGAGGTAGTAAAGTCCAGGTTCAAAAGGGTTTGTGTGTTTTGTGGAAGCAGCACAGGAAAGAGAGACTGCTATAGAGATGCAGCCATTGATTTAGCTCAGGAGCTGGTTTCAAGAAGATTAGGGCTTGTCTATGGAGGTGGAAGCATTGGGCTAATGGGTCTGGTTTCCCAGGCTGTTCATCATGGTGGCGGCAGAGTCATGGGGATCATTCCCAGGACATTAATGAACAAAGAGATAACTGGAGAAACAGTGGGAGAGATAAGACCAGTAGACAACATGCACCAAAGGAAGGCAGAAATGGCCCGCCATTCAGATTGCTTTATAGCCCTTCCAGGTGGGTATGGAACTATGGAAGAACTGTTAGAAGTCATCACATGGGCTCAACTAGGCATCCACGACAAACCAGTTGGGTTGCTGAATGTGGAGGGCTACTACAACAACCTCCTCACTTTCATCGACCAAGCAGTGGAGGATGGTTTCATAAAACCATCACAACGCAACATCATAGTGTCAGCACCCAACGCCAAGGACCTGATTCAGAAACTAGAGGAATACGTGTCTGTACGCGAGGAAGTGATGGGCAAAGCGAGATGA MEGEVVKSRFKRVCVFCGSSTGKRDCYRDAAIDLAQELVSRRLGLVYGGGSIGLMGLVSQAVHHGGGRVMGIIPRTLMNKEITGETVGEIRPVDNMHQRKAEMARHSDCFIALPGGYGTMEELLEVITWAQLGIHDKPVGLLNVEGYYNNLLTFIDQAVEDGFIKPSQRNIIVSAPNAKDLIQKLEEYVSVREEVMGKAR Homology
BLAST of IVF0004170 vs. ExPASy Swiss-Prot
Match: Q8LBB7 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 OS=Arabidopsis thaliana OX=3702 GN=LOG5 PE=1 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.3e-89 Identity = 159/197 (80.71%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80 Identity = 143/192 (74.48%), Postives = 167/192 (86.98%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy Swiss-Prot
Match: Q8GW29 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 297.0 bits (759), Expect = 1.6e-79 Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 2.8e-79 Identity = 140/193 (72.54%), Postives = 171/193 (88.60%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 6.2e-79 Identity = 141/196 (71.94%), Postives = 171/196 (87.24%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy TrEMBL
Match: A0A5D3BZB0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002740 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy TrEMBL
Match: A0A1S3BJF0 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo OX=3656 GN=LOC103490551 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.0e-109 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy TrEMBL
Match: A0A5A7V1H6 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003090 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 7.8e-109 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy TrEMBL
Match: A0A0A0KB16 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus OX=3659 GN=Csa_6G127300 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 6.2e-106 Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of IVF0004170 vs. ExPASy TrEMBL
Match: A0A6J1FU23 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucurbita moschata OX=3662 GN=LOC111448142 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103 Identity = 187/200 (93.50%), Postives = 194/200 (97.00%), Query Frame = 0
BLAST of IVF0004170 vs. NCBI nr
Match: XP_008448322.2 (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis melo] >TYK05021.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 402 bits (1032), Expect = 3.17e-141 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0004170 vs. NCBI nr
Match: KAA0062003.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 400 bits (1027), Expect = 1.84e-140 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of IVF0004170 vs. NCBI nr
Match: XP_011656936.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis sativus] >XP_031742424.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X2 [Cucumis sativus] >KGN46718.1 hypothetical protein Csa_020839 [Cucumis sativus]) HSP 1 Score: 390 bits (1002), Expect = 3.24e-136 Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of IVF0004170 vs. NCBI nr
Match: XP_011656935.1 (cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X1 [Cucumis sativus] >XP_031742423.1 cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 isoform X1 [Cucumis sativus]) HSP 1 Score: 390 bits (1002), Expect = 7.62e-136 Identity = 193/200 (96.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of IVF0004170 vs. NCBI nr
Match: XP_038902735.1 (LOW QUALITY PROTEIN: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5-like [Benincasa hispida]) HSP 1 Score: 388 bits (996), Expect = 5.42e-135 Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of IVF0004170 vs. TAIR 10
Match: AT4G35190.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 329.7 bits (844), Expect = 1.6e-90 Identity = 159/197 (80.71%), Postives = 178/197 (90.36%), Query Frame = 0
BLAST of IVF0004170 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein ) HSP 1 Score: 300.4 bits (768), Expect = 1.0e-81 Identity = 143/192 (74.48%), Postives = 167/192 (86.98%), Query Frame = 0
BLAST of IVF0004170 vs. TAIR 10
Match: AT5G06300.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 297.0 bits (759), Expect = 1.2e-80 Identity = 140/195 (71.79%), Postives = 168/195 (86.15%), Query Frame = 0
BLAST of IVF0004170 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 296.2 bits (757), Expect = 2.0e-80 Identity = 140/193 (72.54%), Postives = 171/193 (88.60%), Query Frame = 0
BLAST of IVF0004170 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein ) HSP 1 Score: 293.1 bits (749), Expect = 1.7e-79 Identity = 140/192 (72.92%), Postives = 164/192 (85.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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