IVF0004164 (gene) Melon (IVF77) v1

Overview


Name	IVF0004164
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DUF4283 domain-containing protein
Location	chr08: 21207446 .. 21207757 (-)
RNA-Seq Expression	IVF0004164
Synteny	IVF0004164

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATAGATGATTACTTCATTGAGAAAACTCCATTGATCTGTAAACAAAGTGGAATGGATAGCCATCATACTATCAAGGATCAGAAGGACACACATTATGAAGGAGAACCTAGTGACCCATTGAAAAATGAAAATGTCGTTCAGGATGAAAATTTGTTCAAACAGAAGTTGGTTGAATGGCTCAAAGAGAATGAATTGAAACTATCTCATAAATATCCGACCAACATGGACAACTCTTCATATGTGGTTATTGATAGTGTTCCAGCCACTTCGGGTGAGGAGCCTAAAGGTGATACCGATCTTACATGA

mRNA sequence

ATGAAGATAGATGATTACTTCATTGAGAAAACTCCATTGATCTGTAAACAAAGTGGAATGGATAGCCATCATACTATCAAGGATCAGAAGGACACACATTATGAAGGAGAACCTAGTGACCCATTGAAAAATGAAAATGTCGTTCAGGATGAAAATTTGTTCAAACAGAAGTTGGTTGAATGGCTCAAAGAGAATGAATTGAAACTATCTCATAAATATCCGACCAACATGGACAACTCTTCATATGTGGTTATTGATAGTGTTCCAGCCACTTCGGGTGAGGAGCCTAAAGGTGATACCGATCTTACATGA

Coding sequence (CDS)

ATGAAGATAGATGATTACTTCATTGAGAAAACTCCATTGATCTGTAAACAAAGTGGAATGGATAGCCATCATACTATCAAGGATCAGAAGGACACACATTATGAAGGAGAACCTAGTGACCCATTGAAAAATGAAAATGTCGTTCAGGATGAAAATTTGTTCAAACAGAAGTTGGTTGAATGGCTCAAAGAGAATGAATTGAAACTATCTCATAAATATCCGACCAACATGGACAACTCTTCATATGTGGTTATTGATAGTGTTCCAGCCACTTCGGGTGAGGAGCCTAAAGGTGATACCGATCTTACATGA

Protein sequence

MKIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEWLKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT

Homology

[Close]

BLAST of IVF0004164 vs. ExPASy TrEMBL
Match: A0A5D3C2M8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001410 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 104
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 359

[Close]

BLAST of IVF0004164 vs. ExPASy TrEMBL
Match: A0A5A7SZY7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00140 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-50
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNEN VQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 104
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDT+LT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 359

[Close]

BLAST of IVF0004164 vs. ExPASy TrEMBL
Match: A0A5A7URE7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00870 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 25  TIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEWLKENELKLSHKYPTNMDNSSYVV 84
           T KDQK THY+GE S+PLK  N   DENLFKQKLVEWLKENELK+S KY  NMDN SYVV
Sbjct: 209 TTKDQKSTHYKGERSEPLKGHNTEHDENLFKQKLVEWLKENELKVSSKYSINMDNFSYVV 268

Query: 85  IDSVPATSGEEPKGDTDLT 104
           ID+VP T GEEPKGDT+LT
Sbjct: 269 IDNVPVTPGEEPKGDTNLT 287

[Close]

BLAST of IVF0004164 vs. NCBI nr
Match: TYK05442.1 (hypothetical protein E5676_scaffold83G001410 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 7.74e-65
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 103
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 359

[Close]

BLAST of IVF0004164 vs. NCBI nr
Match: KAA0034887.1 (hypothetical protein E6C27_scaffold103G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (521), Expect = 4.98e-63
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 2   KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEW 61
           KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNEN VQDENLFKQKLVEW
Sbjct: 258 KIDDYFIEKTPLICKQSGMDSHHTIKDQKDTHYEGEPSDPLKNENGVQDENLFKQKLVEW 317

Query: 62  LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTDLT 103
           LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDT+LT
Sbjct: 318 LKENELKLSHKYPTNMDNSSYVVIDSVPATSGEEPKGDTNLT 359

[Close]

BLAST of IVF0004164 vs. NCBI nr
Match: KAA0056069.1 (hypothetical protein E6C27_scaffold323G00190 [Cucumis melo var. makuwa] >TYK01525.1 hypothetical protein E5676_scaffold451G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 121 bits (303), Expect = 4.20e-31
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 25  TIKDQKDTHYEGEPSDPLKNENVVQDENLFKQKLVEWLKENELKLSHKYPTNMDNSSYVV 84
           T KDQK THY+GE S+PLK  N   DENLFKQKLVEWLKENELK+S KY  NMDN SYVV
Sbjct: 209 TTKDQKSTHYKGERSEPLKGHNTEHDENLFKQKLVEWLKENELKVSSKYSINMDNFSYVV 268

Query: 85  IDSVPATSGEEPKGDTDLT 103
           ID+VP T GEEPKGDT+LT
Sbjct: 269 IDNVPVTPGEEPKGDTNLT 287

The following BLAST results are available for this feature:

BLAST of IVF0004164 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0004164 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2M8	1.7e-51	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SZY7	4.2e-50	98.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7URE7	1.4e-24	75.95	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of IVF0004164 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05442.1	7.74e-65	100.00	hypothetical protein E5676_scaffold83G001410 [Cucumis melo var. makuwa]	[more]
KAA0034887.1	4.98e-63	98.04	hypothetical protein E6C27_scaffold103G00140 [Cucumis melo var. makuwa]	[more]
KAA0056069.1	4.20e-31	75.95	hypothetical protein E6C27_scaffold323G00190 [Cucumis melo var. makuwa] >TYK0152...	[more]

BLAST of IVF0004164 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004164.2	IVF0004164.2	mRNA